RubyGems - rubyneat - Versions diffs - 0.3.5.alpha.3 → 0.3.5.alpha.5 - Mend

rubyneat 0.3.5.alpha.3 → 0.3.5.alpha.5

Files changed (252) hide show

checksums.yaml +4 -4
data/.semver +1 -1
data/Gemfile +19 -19
data/Gemfile.lock +39 -33
data/README.md +66 -0
data/Rakefile +19 -2
data/bin/neat +4 -60
data/lib/rubyneat/cli.rb +5 -0
data/lib/rubyneat/cli/generate.rb +131 -0
data/lib/rubyneat/cli/main.rb +54 -0
data/lib/rubyneat/cli/templates/generate/Gemfile.tt +17 -0
data/lib/rubyneat/cli/templates/generate/README.md.tt +1 -0
data/lib/rubyneat/cli/templates/generate/bin/neat.tt +14 -0
data/{neater/xor_neat.rb → lib/rubyneat/cli/templates/generate/neater.tt} +7 -22
data/rubyneat.gemspec +73 -297
data/rubyneat.gemspec.orig +384 -0
metadata +76 -292
data/.idea/.name +0 -1
data/.idea/.rakeTasks +0 -7
data/.idea/dictionaries/trader.xml +0 -3
data/.idea/encodings.xml +0 -5
data/.idea/misc.xml +0 -5
data/.idea/modules.xml +0 -9
data/.idea/rubyneat.iml +0 -198
data/.idea/runConfigurations/invpend_neat.xml +0 -26
data/.idea/runConfigurations/sigdebug_neat.xml +0 -24
data/.idea/runConfigurations/xor_neat.xml +0 -26
data/.idea/runConfigurations/xordebug_neat.xml +0 -24
data/.idea/runConfigurations/xorsin_neat.xml +0 -24
data/.idea/scopes/scope_settings.xml +0 -5
data/.idea/vcs.xml +0 -7
data/.idea/workspace.xml +0 -1151
data/.yardoc/checksums +0 -11
data/.yardoc/object_types +0 -0
data/.yardoc/objects/root.dat +0 -0
data/.yardoc/proxy_types +0 -0
data/Guardfile +0 -8
data/doc/ControllerPoint.html +0 -125
data/doc/CuteA.html +0 -286
data/doc/CuteB.html +0 -297
data/doc/DSL.html +0 -883
data/doc/NEAT.html +0 -588
data/doc/NEAT/BasicNeuronTypes.html +0 -136
data/doc/NEAT/BasicNeuronTypes/BiasNeuron.html +0 -518
data/doc/NEAT/BasicNeuronTypes/CosineNeuron.html +0 -274
data/doc/NEAT/BasicNeuronTypes/InputNeuron.html +0 -366
data/doc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +0 -275
data/doc/NEAT/BasicNeuronTypes/SineNeuron.html +0 -274
data/doc/NEAT/BasicNeuronTypes/TanhNeuron.html +0 -274
data/doc/NEAT/Controller.html +0 -2490
data/doc/NEAT/Controller/NeatSettings.html +0 -3985
data/doc/NEAT/Critter.html +0 -1037
data/doc/NEAT/Critter/Genotype.html +0 -1601
data/doc/NEAT/Critter/Genotype/Gene.html +0 -979
data/doc/NEAT/Critter/Phenotype.html +0 -603
data/doc/NEAT/DSL.html +0 -1255
data/doc/NEAT/Evaluator.html +0 -420
data/doc/NEAT/Evolver.html +0 -602
data/doc/NEAT/Evolver/CritterOp.html +0 -551
data/doc/NEAT/Expressor.html +0 -327
data/doc/NEAT/Graph.html +0 -402
data/doc/NEAT/Graph/DependencyResolver.html +0 -478
data/doc/NEAT/Graph/GraphException.html +0 -123
data/doc/NEAT/NeatException.html +0 -123
data/doc/NEAT/NeatOb.html +0 -567
data/doc/NEAT/Neuron.html +0 -1067
data/doc/NEAT/Operator.html +0 -162
data/doc/NEAT/Population.html +0 -1961
data/doc/NEAT/Trait.html +0 -169
data/doc/_index.html +0 -373
data/doc/class_list.html +0 -54
data/doc/css/common.css +0 -1
data/doc/css/full_list.css +0 -57
data/doc/css/style.css +0 -339
data/doc/file_list.html +0 -53
data/doc/frames.html +0 -26
data/doc/index.html +0 -373
data/doc/js/app.js +0 -219
data/doc/js/full_list.js +0 -178
data/doc/js/jquery.js +0 -4
data/doc/method_list.html +0 -1415
data/doc/top-level-namespace.html +0 -164
data/foo/foo_aquarium_example.rb +0 -38
data/foo/foo_gosu.rb +0 -99
data/foo/foo_rubygoo.rb +0 -104
data/foo/foo_sdl.rb +0 -34
data/foo/icon.png +0 -0
data/neater/invpend_neat.rb +0 -150
data/neater/rnlib/inverted_pendulum.rb +0 -380
data/neater/rnlib/xor.rb +0 -10
data/neater/sigdebug_neat.rb +0 -136
data/neater/xoranalog_neat.rb +0 -138
data/neater/xorsin_neat.rb +0 -143
data/projectFilesBackup/.idea/rubyneat.iml +0 -180
data/public/.directory +0 -4
data/public/background.png +0 -0
data/public/background.xcf +0 -0
data/public/cart.png +0 -0
data/public/cart.xcf +0 -0
data/public/metalpoles_molton_ball_l.jpg +0 -0
data/public/old_background.png +0 -0
data/public/pointer.png +0 -0
data/public/pointer.xcf +0 -0
data/public/pole.kra +0 -0
data/public/pole.png +0 -0
data/public/pole.xcf +0 -0
data/public/wheel-of-year-stone-DD-131-WOYS.jpg +0 -0
data/public/wheel.png +0 -0
data/public/wheel.xcf +0 -0
data/public/wood-planks-texture.jpg +0 -0
data/rdoc/ControllerPoint.html +0 -116
data/rdoc/CuteA.html +0 -177
data/rdoc/CuteB.html +0 -178
data/rdoc/DSLSetup.html +0 -177
data/rdoc/GameTestWindow.html +0 -242
data/rdoc/GameWindow.html +0 -292
data/rdoc/Gemfile.html +0 -215
data/rdoc/Gemfile_lock.html +0 -327
data/rdoc/GraphTest.html +0 -210
data/rdoc/Guardfile.html +0 -198
data/rdoc/InvertedPendulum.html +0 -198
data/rdoc/InvertedPendulum/Cart.html +0 -668
data/rdoc/InvertedPendulum/DSL.html +0 -259
data/rdoc/InvertedPendulum/InvPendWindow.html +0 -402
data/rdoc/Logger.html +0 -98
data/rdoc/NEAT.html +0 -422
data/rdoc/NEAT/BasicNeuronTypes.html +0 -107
data/rdoc/NEAT/BasicNeuronTypes/BiasNeuron.html +0 -265
data/rdoc/NEAT/BasicNeuronTypes/CosineNeuron.html +0 -162
data/rdoc/NEAT/BasicNeuronTypes/InputNeuron.html +0 -206
data/rdoc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +0 -162
data/rdoc/NEAT/BasicNeuronTypes/SineNeuron.html +0 -162
data/rdoc/NEAT/BasicNeuronTypes/TanhNeuron.html +0 -161
data/rdoc/NEAT/Controller.html +0 -729
data/rdoc/NEAT/Controller/NeatSettings.html +0 -880
data/rdoc/NEAT/Critter.html +0 -489
data/rdoc/NEAT/Critter/Genotype.html +0 -735
data/rdoc/NEAT/Critter/Genotype/Gene.html +0 -457
data/rdoc/NEAT/Critter/Phenotype.html +0 -330
data/rdoc/NEAT/DSL.html +0 -729
data/rdoc/NEAT/Evaluator.html +0 -256
data/rdoc/NEAT/Evolver.html +0 -891
data/rdoc/NEAT/Evolver/CritterOp.html +0 -349
data/rdoc/NEAT/Expressor.html +0 -402
data/rdoc/NEAT/Graph.html +0 -263
data/rdoc/NEAT/Graph/DependencyResolver.html +0 -291
data/rdoc/NEAT/Graph/GraphException.html +0 -105
data/rdoc/NEAT/NeatException.html +0 -105
data/rdoc/NEAT/NeatOb.html +0 -325
data/rdoc/NEAT/Neuron.html +0 -481
data/rdoc/NEAT/Operator.html +0 -109
data/rdoc/NEAT/Population.html +0 -935
data/rdoc/NEAT/Trait.html +0 -117
data/rdoc/Object.html +0 -384
data/rdoc/Phi.html +0 -98
data/rdoc/Player.html +0 -383
data/rdoc/Rakefile.html +0 -254
data/rdoc/RubyNEAT.html +0 -98
data/rdoc/RubyNEAT/Application.html +0 -105
data/rdoc/SDL.html +0 -98
data/rdoc/SDL/Event2.html +0 -98
data/rdoc/Vector.html +0 -195
data/rdoc/created.rid +0 -125
data/rdoc/doc/ControllerPoint_html.html +0 -299
data/rdoc/doc/CuteA_html.html +0 -438
data/rdoc/doc/CuteB_html.html +0 -436
data/rdoc/doc/DSL_html.html +0 -992
data/rdoc/doc/NEAT/BasicNeuronTypes/BiasNeuron_html.html +0 -617
data/rdoc/doc/NEAT/BasicNeuronTypes/CosineNeuron_html.html +0 -413
data/rdoc/doc/NEAT/BasicNeuronTypes/InputNeuron_html.html +0 -498
data/rdoc/doc/NEAT/BasicNeuronTypes/SigmoidNeuron_html.html +0 -413
data/rdoc/doc/NEAT/BasicNeuronTypes/SineNeuron_html.html +0 -413
data/rdoc/doc/NEAT/BasicNeuronTypes/TanhNeuron_html.html +0 -412
data/rdoc/doc/NEAT/BasicNeuronTypes_html.html +0 -310
data/rdoc/doc/NEAT/Controller/NeatSettings_html.html +0 -3324
data/rdoc/doc/NEAT/Controller_html.html +0 -2212
data/rdoc/doc/NEAT/Critter/Genotype/Gene_html.html +0 -997
data/rdoc/doc/NEAT/Critter/Genotype_html.html +0 -1556
data/rdoc/doc/NEAT/Critter/Phenotype_html.html +0 -687
data/rdoc/doc/NEAT/Critter_html.html +0 -1037
data/rdoc/doc/NEAT/DSL_html.html +0 -1349
data/rdoc/doc/NEAT/Evaluator_html.html +0 -556
data/rdoc/doc/NEAT/Evolver/CritterOp_html.html +0 -690
data/rdoc/doc/NEAT/Evolver_html.html +0 -677
data/rdoc/doc/NEAT/Expressor_html.html +0 -468
data/rdoc/doc/NEAT/Graph/DependencyResolver_html.html +0 -598
data/rdoc/doc/NEAT/Graph/GraphException_html.html +0 -299
data/rdoc/doc/NEAT/Graph_html.html +0 -527
data/rdoc/doc/NEAT/NeatException_html.html +0 -299
data/rdoc/doc/NEAT/NeatOb_html.html +0 -671
data/rdoc/doc/NEAT/Neuron_html.html +0 -1095
data/rdoc/doc/NEAT/Operator_html.html +0 -337
data/rdoc/doc/NEAT/Population_html.html +0 -1795
data/rdoc/doc/NEAT/Trait_html.html +0 -344
data/rdoc/doc/NEAT_html.html +0 -736
data/rdoc/doc/_index_html.html +0 -559
data/rdoc/doc/class_list_html.html +0 -369
data/rdoc/doc/css/common_css.html +0 -188
data/rdoc/doc/css/full_list_css.html +0 -243
data/rdoc/doc/css/style_css.html +0 -530
data/rdoc/doc/file_list_html.html +0 -240
data/rdoc/doc/frames_html.html +0 -217
data/rdoc/doc/index_html.html +0 -559
data/rdoc/doc/js/app_js.html +0 -423
data/rdoc/doc/js/full_list_js.html +0 -372
data/rdoc/doc/js/jquery_js.html +0 -1536
data/rdoc/doc/method_list_html.html +0 -1375
data/rdoc/doc/top-level-namespace_html.html +0 -317
data/rdoc/fonts.css +0 -167
data/rdoc/fonts/Lato-Light.ttf +0 -0
data/rdoc/fonts/Lato-LightItalic.ttf +0 -0
data/rdoc/fonts/Lato-Regular.ttf +0 -0
data/rdoc/fonts/Lato-RegularItalic.ttf +0 -0
data/rdoc/fonts/SourceCodePro-Bold.ttf +0 -0
data/rdoc/fonts/SourceCodePro-Regular.ttf +0 -0
data/rdoc/images/add.png +0 -0
data/rdoc/images/arrow_up.png +0 -0
data/rdoc/images/brick.png +0 -0
data/rdoc/images/brick_link.png +0 -0
data/rdoc/images/bug.png +0 -0
data/rdoc/images/bullet_black.png +0 -0
data/rdoc/images/bullet_toggle_minus.png +0 -0
data/rdoc/images/bullet_toggle_plus.png +0 -0
data/rdoc/images/date.png +0 -0
data/rdoc/images/delete.png +0 -0
data/rdoc/images/find.png +0 -0
data/rdoc/images/loadingAnimation.gif +0 -0
data/rdoc/images/macFFBgHack.png +0 -0
data/rdoc/images/package.png +0 -0
data/rdoc/images/page_green.png +0 -0
data/rdoc/images/page_white_text.png +0 -0
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data/rdoc/images/ruby.png +0 -0
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data/rdoc/images/zoom.png +0 -0
data/rdoc/index.html +0 -282
data/rdoc/js/darkfish.js +0 -140
data/rdoc/js/jquery.js +0 -18
data/rdoc/js/navigation.js +0 -142
data/rdoc/js/search.js +0 -109
data/rdoc/js/search_index.js +0 -1
data/rdoc/js/searcher.js +0 -228
data/rdoc/rdoc.css +0 -580
data/rdoc/rubyneat_gemspec.html +0 -387
data/rdoc/table_of_contents.html +0 -2502
data/rdoc/xordebug_log.html +0 -170598
data/rdoc/xorsin_log.html +0 -22569

data/doc/NEAT/Graph/GraphException.html DELETED Viewed

@@ -1,123 +0,0 @@
-<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
-  "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
-<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
-  <head>
-    <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-<title>
-  Exception: NEAT::Graph::GraphException
-    &mdash; Documentation by YARD 0.8.7.4
-</title>
-  <link rel="stylesheet" href="../../css/style.css" type="text/css" charset="utf-8" />
-  <link rel="stylesheet" href="../../css/common.css" type="text/css" charset="utf-8" />
-<script type="text/javascript" charset="utf-8">
-  hasFrames = window.top.frames.main ? true : false;
-  relpath = '../../';
-  framesUrl = "../../frames.html#!NEAT/Graph/GraphException.html";
-</script>
-  <script type="text/javascript" charset="utf-8" src="../../js/jquery.js"></script>
-  <script type="text/javascript" charset="utf-8" src="../../js/app.js"></script>
-  </head>
-  <body>
-    <div id="header">
-      <div id="menu">
-    <a href="../../_index.html">Index (G)</a> &raquo;
-    <span class='title'><span class='object_link'><a href="../../NEAT.html" title="NEAT (module)">NEAT</a></span></span> &raquo; <span class='title'><span class='object_link'><a href="../Graph.html" title="NEAT::Graph (module)">Graph</a></span></span>
-     &raquo;
-    <span class="title">GraphException</span>
-  <div class="noframes"><span class="title">(</span><a href="." target="_top">no frames</a><span class="title">)</span></div>
-</div>
-      <div id="search">
-    <a class="full_list_link" id="class_list_link"
-        href="../../class_list.html">
-      Class List
-    </a>
-    <a class="full_list_link" id="method_list_link"
-        href="../../method_list.html">
-      Method List
-    </a>
-    <a class="full_list_link" id="file_list_link"
-        href="../../file_list.html">
-      File List
-    </a>
-</div>
-      <div class="clear"></div>
-    </div>
-    <iframe id="search_frame"></iframe>
-    <div id="content"><h1>Exception: NEAT::Graph::GraphException
-</h1>
-<dl class="box">
-    <dt class="r1">Inherits:</dt>
-    <dd class="r1">
-      <span class="inheritName">Exception</span>
-        <ul class="fullTree">
-          <li>Object</li>
-            <li class="next">Exception</li>
-            <li class="next">NEAT::Graph::GraphException</li>
-        </ul>
-        <a href="#" class="inheritanceTree">show all</a>
-      </dd>
-    <dt class="r2 last">Defined in:</dt>
-    <dd class="r2 last">lib/rubyneat/graph.rb</dd>
-</dl>
-<div class="clear"></div>
-</div>
-    <div id="footer">
-  Generated on Sun Apr 13 15:54:02 2014 by
-  <a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.8.7.4 (ruby-2.1.1).
-</div>
-  </body>
-</html>

data/doc/NEAT/NeatException.html DELETED Viewed

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-<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
-  "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
-<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
-  <head>
-    <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-<title>
-  Exception: NEAT::NeatException
-    &mdash; Documentation by YARD 0.8.7.4
-</title>
-  <link rel="stylesheet" href="../css/style.css" type="text/css" charset="utf-8" />
-  <link rel="stylesheet" href="../css/common.css" type="text/css" charset="utf-8" />
-<script type="text/javascript" charset="utf-8">
-  hasFrames = window.top.frames.main ? true : false;
-  relpath = '../';
-  framesUrl = "../frames.html#!NEAT/NeatException.html";
-</script>
-  <script type="text/javascript" charset="utf-8" src="../js/jquery.js"></script>
-  <script type="text/javascript" charset="utf-8" src="../js/app.js"></script>
-  </head>
-  <body>
-    <div id="header">
-      <div id="menu">
-    <a href="../_index.html">Index (N)</a> &raquo;
-    <span class='title'><span class='object_link'><a href="../NEAT.html" title="NEAT (module)">NEAT</a></span></span>
-     &raquo;
-    <span class="title">NeatException</span>
-  <div class="noframes"><span class="title">(</span><a href="." target="_top">no frames</a><span class="title">)</span></div>
-</div>
-      <div id="search">
-    <a class="full_list_link" id="class_list_link"
-        href="../class_list.html">
-      Class List
-    </a>
-    <a class="full_list_link" id="method_list_link"
-        href="../method_list.html">
-      Method List
-    </a>
-    <a class="full_list_link" id="file_list_link"
-        href="../file_list.html">
-      File List
-    </a>
-</div>
-      <div class="clear"></div>
-    </div>
-    <iframe id="search_frame"></iframe>
-    <div id="content"><h1>Exception: NEAT::NeatException
-</h1>
-<dl class="box">
-    <dt class="r1">Inherits:</dt>
-    <dd class="r1">
-      <span class="inheritName">Exception</span>
-        <ul class="fullTree">
-          <li>Object</li>
-            <li class="next">Exception</li>
-            <li class="next">NEAT::NeatException</li>
-        </ul>
-        <a href="#" class="inheritanceTree">show all</a>
-      </dd>
-    <dt class="r2 last">Defined in:</dt>
-    <dd class="r2 last">lib/rubyneat/rubyneat.rb</dd>
-</dl>
-<div class="clear"></div>
-</div>
-    <div id="footer">
-  Generated on Sun Apr 13 15:54:02 2014 by
-  <a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.8.7.4 (ruby-2.1.1).
-</div>
-  </body>
-</html>

data/doc/NEAT/NeatOb.html DELETED Viewed

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-<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
-  "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
-<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
-  <head>
-    <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-<title>
-  Class: NEAT::NeatOb
-    &mdash; Documentation by YARD 0.8.7.4
-</title>
-  <link rel="stylesheet" href="../css/style.css" type="text/css" charset="utf-8" />
-  <link rel="stylesheet" href="../css/common.css" type="text/css" charset="utf-8" />
-<script type="text/javascript" charset="utf-8">
-  hasFrames = window.top.frames.main ? true : false;
-  relpath = '../';
-  framesUrl = "../frames.html#!NEAT/NeatOb.html";
-</script>
-  <script type="text/javascript" charset="utf-8" src="../js/jquery.js"></script>
-  <script type="text/javascript" charset="utf-8" src="../js/app.js"></script>
-  </head>
-  <body>
-    <div id="header">
-      <div id="menu">
-    <a href="../_index.html">Index (N)</a> &raquo;
-    <span class='title'><span class='object_link'><a href="../NEAT.html" title="NEAT (module)">NEAT</a></span></span>
-     &raquo;
-    <span class="title">NeatOb</span>
-  <div class="noframes"><span class="title">(</span><a href="." target="_top">no frames</a><span class="title">)</span></div>
-</div>
-      <div id="search">
-    <a class="full_list_link" id="class_list_link"
-        href="../class_list.html">
-      Class List
-    </a>
-    <a class="full_list_link" id="method_list_link"
-        href="../method_list.html">
-      Method List
-    </a>
-    <a class="full_list_link" id="file_list_link"
-        href="../file_list.html">
-      File List
-    </a>
-</div>
-      <div class="clear"></div>
-    </div>
-    <iframe id="search_frame"></iframe>
-    <div id="content"><h1>Class: NEAT::NeatOb
-</h1>
-<dl class="box">
-    <dt class="r1">Inherits:</dt>
-    <dd class="r1">
-      <span class="inheritName">Object</span>
-        <ul class="fullTree">
-          <li>Object</li>
-            <li class="next">NEAT::NeatOb</li>
-        </ul>
-        <a href="#" class="inheritanceTree">show all</a>
-      </dd>
-      <dt class="r2">Includes:</dt>
-      <dd class="r2">DeepDive</dd>
-    <dt class="r1 last">Defined in:</dt>
-    <dd class="r1 last">lib/rubyneat/rubyneat.rb</dd>
-</dl>
-<div class="clear"></div>
-<h2>Overview</h2><div class="docstring">
-  <div class="discussion">
-<p>Basis of all NEAT objects</p>
-  </div>
-</div>
-<div class="tags">
-</div><div id="subclasses">
-  <h2>Direct Known Subclasses</h2>
-  <p class="children"><span class='object_link'><a href="Controller.html" title="NEAT::Controller (class)">Controller</a></span>, <span class='object_link'><a href="Controller/NeatSettings.html" title="NEAT::Controller::NeatSettings (class)">Controller::NeatSettings</a></span>, <span class='object_link'><a href="Critter.html" title="NEAT::Critter (class)">Critter</a></span>, <span class='object_link'><a href="Critter/Genotype.html" title="NEAT::Critter::Genotype (class)">Critter::Genotype</a></span>, <span class='object_link'><a href="Critter/Genotype/Gene.html" title="NEAT::Critter::Genotype::Gene (class)">Critter::Genotype::Gene</a></span>, <span class='object_link'><a href="Critter/Phenotype.html" title="NEAT::Critter::Phenotype (class)">Critter::Phenotype</a></span>, <span class='object_link'><a href="Evolver/CritterOp.html" title="NEAT::Evolver::CritterOp (class)">Evolver::CritterOp</a></span>, <span class='object_link'><a href="Graph/DependencyResolver.html" title="NEAT::Graph::DependencyResolver (class)">Graph::DependencyResolver</a></span>, <span class='object_link'><a href="Neuron.html" title="NEAT::Neuron (class)">Neuron</a></span>, <span class='object_link'><a href="Operator.html" title="NEAT::Operator (class)">Operator</a></span>, <span class='object_link'><a href="Population.html" title="NEAT::Population (class)">Population</a></span>, <span class='object_link'><a href="Trait.html" title="NEAT::Trait (class)">Trait</a></span></p>
-</div>
-  <h2>Instance Attribute Summary <small>(<a href="#" class="summary_toggle">collapse</a>)</small></h2>
-  <ul class="summary">
-      <li class="public ">
-  <span class="summary_signature">
-      <a href="#controller-instance_method" title="#controller (instance method)">- (Object) <strong>controller</strong> </a>
-  </span>
-      <span class="note title readonly">readonly</span>
-    <span class="summary_desc"><div class='inline'>
-<p>Who&#39;s your daddy?.</p>
-</div></span>
-</li>
-      <li class="public ">
-  <span class="summary_signature">
-      <a href="#name-instance_method" title="#name (instance method)">- (Object) <strong>name</strong> </a>
-  </span>
-      <span class="note title readonly">readonly</span>
-    <span class="summary_desc"><div class='inline'>
-<p>Designation of this particular object instance.</p>
-</div></span>
-</li>
-  </ul>
-    <h2>
-      Class Method Summary
-      <small>(<a href="#" class="summary_toggle">collapse</a>)</small>
-    </h2>
-    <ul class="summary">
-        <li class="public ">
-  <span class="summary_signature">
-      <a href="#log-class_method" title="log (class method)">+ (Object) <strong>log</strong> </a>
-  </span>
-    <span class="summary_desc"><div class='inline'></div></span>
-</li>
-    </ul>
-    <h2>
-      Instance Method Summary
-      <small>(<a href="#" class="summary_toggle">collapse</a>)</small>
-    </h2>
-    <ul class="summary">
-        <li class="public ">
-  <span class="summary_signature">
-      <a href="#initialize-instance_method" title="#initialize (instance method)">- (NeatOb) <strong>initialize</strong>(controller = nil, name = nil) </a>
-  </span>
-    <span class="note title constructor">constructor</span>
-    <span class="summary_desc"><div class='inline'>
-<p>Initializer for all NEAT objects.</p>
-</div></span>
-</li>
-        <li class="public ">
-  <span class="summary_signature">
-      <a href="#log-instance_method" title="#log (instance method)">- (Object) <strong>log</strong> </a>
-  </span>
-    <span class="summary_desc"><div class='inline'></div></span>
-</li>
-        <li class="public ">
-  <span class="summary_signature">
-      <a href="#to_s-instance_method" title="#to_s (instance method)">- (Object) <strong>to_s</strong> </a>
-  </span>
-    <span class="summary_desc"><div class='inline'></div></span>
-</li>
-    </ul>
-  <div id="constructor_details" class="method_details_list">
-  <h2>Constructor Details</h2>
-    <div class="method_details first">
-  <h3 class="signature first" id="initialize-instance_method">
-    - (<tt><span class='object_link'><a href="" title="NEAT::NeatOb (class)">NeatOb</a></span></tt>) <strong>initialize</strong>(controller = nil, name = nil)
-</h3><div class="docstring">
-  <div class="discussion">
-<p>Initializer for all NEAT objects. Requires that the controller object is
-specified for all classes with the exception of the Controller itself or
-the Controller&#39;s NeatSettings.</p>
-  </div>
-</div>
-<div class="tags">
-</div><table class="source_code">
-  <tr>
-    <td>
-      <pre class="lines">
-99
-100
-101
-102
-103
-104
-105
-106
-107
-108
-109
-110
-111</pre>
-    </td>
-    <td>
-      <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 99</span>
-<span class='kw'>def</span> <span class='id identifier rubyid_initialize'>initialize</span><span class='lparen'>(</span><span class='id identifier rubyid_controller'>controller</span> <span class='op'>=</span> <span class='kw'>nil</span><span class='comma'>,</span> <span class='id identifier rubyid_name'>name</span> <span class='op'>=</span> <span class='kw'>nil</span><span class='rparen'>)</span>
-  <span class='ivar'>@name</span> <span class='op'>=</span> <span class='kw'>unless</span> <span class='id identifier rubyid_name'>name</span><span class='period'>.</span><span class='id identifier rubyid_nil?'>nil?</span>
-            <span class='id identifier rubyid_name'>name</span><span class='period'>.</span><span class='id identifier rubyid_to_sym'>to_sym</span>
-          <span class='kw'>else</span>
-            <span class='const'>NEAT</span><span class='op'>::</span><span class='id identifier rubyid_random_name_generator'>random_name_generator</span>
-          <span class='kw'>end</span>
-  <span class='kw'>unless</span> <span class='id identifier rubyid_controller'>controller</span><span class='period'>.</span><span class='id identifier rubyid_nil?'>nil?</span>
-    <span class='ivar'>@controller</span> <span class='op'>=</span> <span class='id identifier rubyid_controller'>controller</span>
-  <span class='kw'>else</span>
-    <span class='id identifier rubyid_raise'>raise</span> <span class='const'>NeatException</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Controller Needed!</span><span class='tstring_end'>&quot;</span></span> <span class='kw'>unless</span> <span class='kw'>self</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span><span class='lparen'>(</span><span class='const'>Controller</span><span class='rparen'>)</span> <span class='kw'>or</span> <span class='kw'>self</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span><span class='lparen'>(</span><span class='const'>Controller</span><span class='op'>::</span><span class='const'>NeatSettings</span><span class='rparen'>)</span>
-    <span class='ivar'>@controller</span> <span class='op'>=</span> <span class='kw'>self</span> <span class='kw'>unless</span> <span class='kw'>self</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>Controller</span><span class='op'>::</span><span class='const'>NeatSettings</span>
-  <span class='kw'>end</span>
-<span class='kw'>end</span></pre>
-    </td>
-  </tr>
-</table>
-</div>
-</div>
-  <div id="instance_attr_details" class="attr_details">
-    <h2>Instance Attribute Details</h2>
-      <span id=""></span>
-      <div class="method_details first">
-  <h3 class="signature first" id="controller-instance_method">
-    - (<tt>Object</tt>) <strong>controller</strong>  <span class="extras">(readonly)</span>
-</h3><div class="docstring">
-  <div class="discussion">
-<p>Who&#39;s your daddy?</p>
-  </div>
-</div>
-<div class="tags">
-</div><table class="source_code">
-  <tr>
-    <td>
-      <pre class="lines">
-90
-91
-92</pre>
-    </td>
-    <td>
-      <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 90</span>
-<span class='kw'>def</span> <span class='id identifier rubyid_controller'>controller</span>
-  <span class='ivar'>@controller</span>
-<span class='kw'>end</span></pre>
-    </td>
-  </tr>
-</table>
-</div>
-      <span id=""></span>
-      <div class="method_details ">
-  <h3 class="signature " id="name-instance_method">
-    - (<tt>Object</tt>) <strong>name</strong>  <span class="extras">(readonly)</span>
-</h3><div class="docstring">
-  <div class="discussion">
-<p>Designation of this particular object instance</p>
-  </div>
-</div>
-<div class="tags">
-</div><table class="source_code">
-  <tr>
-    <td>
-      <pre class="lines">
-87
-88
-89</pre>
-    </td>
-    <td>
-      <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 87</span>
-<span class='kw'>def</span> <span class='id identifier rubyid_name'>name</span>
-  <span class='ivar'>@name</span>
-<span class='kw'>end</span></pre>
-    </td>
-  </tr>
-</table>
-</div>
-  </div>
-  <div id="class_method_details" class="method_details_list">
-    <h2>Class Method Details</h2>
-      <div class="method_details first">
-  <h3 class="signature first" id="log-class_method">
-    + (<tt>Object</tt>) <strong>log</strong>
-</h3><table class="source_code">
-  <tr>
-    <td>
-      <pre class="lines">
-93</pre>
-    </td>
-    <td>
-      <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 93</span>
-<span class='kw'>def</span> <span class='kw'>self</span><span class='period'>.</span><span class='id identifier rubyid_log'>log</span> <span class='semicolon'>;</span> <span class='gvar'>$log</span><span class='semicolon'>;</span> <span class='kw'>end</span></pre>
-    </td>
-  </tr>
-</table>
-</div>
-  </div>
-  <div id="instance_method_details" class="method_details_list">
-    <h2>Instance Method Details</h2>
-      <div class="method_details first">
-  <h3 class="signature first" id="log-instance_method">
-    - (<tt>Object</tt>) <strong>log</strong>
-</h3><table class="source_code">
-  <tr>
-    <td>
-      <pre class="lines">
-92</pre>
-    </td>
-    <td>
-      <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 92</span>
-<span class='kw'>def</span> <span class='id identifier rubyid_log'>log</span> <span class='semicolon'>;</span> <span class='gvar'>$log</span> <span class='semicolon'>;</span> <span class='kw'>end</span></pre>
-    </td>
-  </tr>
-</table>
-</div>
-      <div class="method_details ">
-  <h3 class="signature " id="to_s-instance_method">
-    - (<tt>Object</tt>) <strong>to_s</strong>
-</h3><table class="source_code">
-  <tr>
-    <td>
-      <pre class="lines">
-113
-114
-115</pre>
-    </td>
-    <td>
-      <pre class="code"><span class="info file"># File 'lib/rubyneat/rubyneat.rb', line 113</span>
-<span class='kw'>def</span> <span class='id identifier rubyid_to_s'>to_s</span>
-  <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>%s&lt;%s&gt;</span><span class='tstring_end'>&quot;</span></span> <span class='op'>%</span> <span class='lbracket'>[</span><span class='kw'>self</span><span class='period'>.</span><span class='id identifier rubyid_class'>class</span><span class='comma'>,</span> <span class='kw'>self</span><span class='period'>.</span><span class='id identifier rubyid_name'>name</span><span class='rbracket'>]</span>
-<span class='kw'>end</span></pre>
-    </td>
-  </tr>
-</table>
-</div>
-  </div>
-</div>
-    <div id="footer">
-  Generated on Sun Apr 13 15:54:02 2014 by
-  <a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.8.7.4 (ruby-2.1.1).
-</div>
-  </body>
-</html>