rubyneat 0.3.5.alpha.3 → 0.3.5.alpha.5

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Files changed (252) hide show
  1. checksums.yaml +4 -4
  2. data/.semver +1 -1
  3. data/Gemfile +19 -19
  4. data/Gemfile.lock +39 -33
  5. data/README.md +66 -0
  6. data/Rakefile +19 -2
  7. data/bin/neat +4 -60
  8. data/lib/rubyneat/cli.rb +5 -0
  9. data/lib/rubyneat/cli/generate.rb +131 -0
  10. data/lib/rubyneat/cli/main.rb +54 -0
  11. data/lib/rubyneat/cli/templates/generate/Gemfile.tt +17 -0
  12. data/lib/rubyneat/cli/templates/generate/README.md.tt +1 -0
  13. data/lib/rubyneat/cli/templates/generate/bin/neat.tt +14 -0
  14. data/{neater/xor_neat.rb → lib/rubyneat/cli/templates/generate/neater.tt} +7 -22
  15. data/rubyneat.gemspec +73 -297
  16. data/rubyneat.gemspec.orig +384 -0
  17. metadata +76 -292
  18. data/.idea/.name +0 -1
  19. data/.idea/.rakeTasks +0 -7
  20. data/.idea/dictionaries/trader.xml +0 -3
  21. data/.idea/encodings.xml +0 -5
  22. data/.idea/misc.xml +0 -5
  23. data/.idea/modules.xml +0 -9
  24. data/.idea/rubyneat.iml +0 -198
  25. data/.idea/runConfigurations/invpend_neat.xml +0 -26
  26. data/.idea/runConfigurations/sigdebug_neat.xml +0 -24
  27. data/.idea/runConfigurations/xor_neat.xml +0 -26
  28. data/.idea/runConfigurations/xordebug_neat.xml +0 -24
  29. data/.idea/runConfigurations/xorsin_neat.xml +0 -24
  30. data/.idea/scopes/scope_settings.xml +0 -5
  31. data/.idea/vcs.xml +0 -7
  32. data/.idea/workspace.xml +0 -1151
  33. data/.yardoc/checksums +0 -11
  34. data/.yardoc/object_types +0 -0
  35. data/.yardoc/objects/root.dat +0 -0
  36. data/.yardoc/proxy_types +0 -0
  37. data/Guardfile +0 -8
  38. data/doc/ControllerPoint.html +0 -125
  39. data/doc/CuteA.html +0 -286
  40. data/doc/CuteB.html +0 -297
  41. data/doc/DSL.html +0 -883
  42. data/doc/NEAT.html +0 -588
  43. data/doc/NEAT/BasicNeuronTypes.html +0 -136
  44. data/doc/NEAT/BasicNeuronTypes/BiasNeuron.html +0 -518
  45. data/doc/NEAT/BasicNeuronTypes/CosineNeuron.html +0 -274
  46. data/doc/NEAT/BasicNeuronTypes/InputNeuron.html +0 -366
  47. data/doc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +0 -275
  48. data/doc/NEAT/BasicNeuronTypes/SineNeuron.html +0 -274
  49. data/doc/NEAT/BasicNeuronTypes/TanhNeuron.html +0 -274
  50. data/doc/NEAT/Controller.html +0 -2490
  51. data/doc/NEAT/Controller/NeatSettings.html +0 -3985
  52. data/doc/NEAT/Critter.html +0 -1037
  53. data/doc/NEAT/Critter/Genotype.html +0 -1601
  54. data/doc/NEAT/Critter/Genotype/Gene.html +0 -979
  55. data/doc/NEAT/Critter/Phenotype.html +0 -603
  56. data/doc/NEAT/DSL.html +0 -1255
  57. data/doc/NEAT/Evaluator.html +0 -420
  58. data/doc/NEAT/Evolver.html +0 -602
  59. data/doc/NEAT/Evolver/CritterOp.html +0 -551
  60. data/doc/NEAT/Expressor.html +0 -327
  61. data/doc/NEAT/Graph.html +0 -402
  62. data/doc/NEAT/Graph/DependencyResolver.html +0 -478
  63. data/doc/NEAT/Graph/GraphException.html +0 -123
  64. data/doc/NEAT/NeatException.html +0 -123
  65. data/doc/NEAT/NeatOb.html +0 -567
  66. data/doc/NEAT/Neuron.html +0 -1067
  67. data/doc/NEAT/Operator.html +0 -162
  68. data/doc/NEAT/Population.html +0 -1961
  69. data/doc/NEAT/Trait.html +0 -169
  70. data/doc/_index.html +0 -373
  71. data/doc/class_list.html +0 -54
  72. data/doc/css/common.css +0 -1
  73. data/doc/css/full_list.css +0 -57
  74. data/doc/css/style.css +0 -339
  75. data/doc/file_list.html +0 -53
  76. data/doc/frames.html +0 -26
  77. data/doc/index.html +0 -373
  78. data/doc/js/app.js +0 -219
  79. data/doc/js/full_list.js +0 -178
  80. data/doc/js/jquery.js +0 -4
  81. data/doc/method_list.html +0 -1415
  82. data/doc/top-level-namespace.html +0 -164
  83. data/foo/foo_aquarium_example.rb +0 -38
  84. data/foo/foo_gosu.rb +0 -99
  85. data/foo/foo_rubygoo.rb +0 -104
  86. data/foo/foo_sdl.rb +0 -34
  87. data/foo/icon.png +0 -0
  88. data/neater/invpend_neat.rb +0 -150
  89. data/neater/rnlib/inverted_pendulum.rb +0 -380
  90. data/neater/rnlib/xor.rb +0 -10
  91. data/neater/sigdebug_neat.rb +0 -136
  92. data/neater/xoranalog_neat.rb +0 -138
  93. data/neater/xorsin_neat.rb +0 -143
  94. data/projectFilesBackup/.idea/rubyneat.iml +0 -180
  95. data/public/.directory +0 -4
  96. data/public/background.png +0 -0
  97. data/public/background.xcf +0 -0
  98. data/public/cart.png +0 -0
  99. data/public/cart.xcf +0 -0
  100. data/public/metalpoles_molton_ball_l.jpg +0 -0
  101. data/public/old_background.png +0 -0
  102. data/public/pointer.png +0 -0
  103. data/public/pointer.xcf +0 -0
  104. data/public/pole.kra +0 -0
  105. data/public/pole.png +0 -0
  106. data/public/pole.xcf +0 -0
  107. data/public/wheel-of-year-stone-DD-131-WOYS.jpg +0 -0
  108. data/public/wheel.png +0 -0
  109. data/public/wheel.xcf +0 -0
  110. data/public/wood-planks-texture.jpg +0 -0
  111. data/rdoc/ControllerPoint.html +0 -116
  112. data/rdoc/CuteA.html +0 -177
  113. data/rdoc/CuteB.html +0 -178
  114. data/rdoc/DSLSetup.html +0 -177
  115. data/rdoc/GameTestWindow.html +0 -242
  116. data/rdoc/GameWindow.html +0 -292
  117. data/rdoc/Gemfile.html +0 -215
  118. data/rdoc/Gemfile_lock.html +0 -327
  119. data/rdoc/GraphTest.html +0 -210
  120. data/rdoc/Guardfile.html +0 -198
  121. data/rdoc/InvertedPendulum.html +0 -198
  122. data/rdoc/InvertedPendulum/Cart.html +0 -668
  123. data/rdoc/InvertedPendulum/DSL.html +0 -259
  124. data/rdoc/InvertedPendulum/InvPendWindow.html +0 -402
  125. data/rdoc/Logger.html +0 -98
  126. data/rdoc/NEAT.html +0 -422
  127. data/rdoc/NEAT/BasicNeuronTypes.html +0 -107
  128. data/rdoc/NEAT/BasicNeuronTypes/BiasNeuron.html +0 -265
  129. data/rdoc/NEAT/BasicNeuronTypes/CosineNeuron.html +0 -162
  130. data/rdoc/NEAT/BasicNeuronTypes/InputNeuron.html +0 -206
  131. data/rdoc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +0 -162
  132. data/rdoc/NEAT/BasicNeuronTypes/SineNeuron.html +0 -162
  133. data/rdoc/NEAT/BasicNeuronTypes/TanhNeuron.html +0 -161
  134. data/rdoc/NEAT/Controller.html +0 -729
  135. data/rdoc/NEAT/Controller/NeatSettings.html +0 -880
  136. data/rdoc/NEAT/Critter.html +0 -489
  137. data/rdoc/NEAT/Critter/Genotype.html +0 -735
  138. data/rdoc/NEAT/Critter/Genotype/Gene.html +0 -457
  139. data/rdoc/NEAT/Critter/Phenotype.html +0 -330
  140. data/rdoc/NEAT/DSL.html +0 -729
  141. data/rdoc/NEAT/Evaluator.html +0 -256
  142. data/rdoc/NEAT/Evolver.html +0 -891
  143. data/rdoc/NEAT/Evolver/CritterOp.html +0 -349
  144. data/rdoc/NEAT/Expressor.html +0 -402
  145. data/rdoc/NEAT/Graph.html +0 -263
  146. data/rdoc/NEAT/Graph/DependencyResolver.html +0 -291
  147. data/rdoc/NEAT/Graph/GraphException.html +0 -105
  148. data/rdoc/NEAT/NeatException.html +0 -105
  149. data/rdoc/NEAT/NeatOb.html +0 -325
  150. data/rdoc/NEAT/Neuron.html +0 -481
  151. data/rdoc/NEAT/Operator.html +0 -109
  152. data/rdoc/NEAT/Population.html +0 -935
  153. data/rdoc/NEAT/Trait.html +0 -117
  154. data/rdoc/Object.html +0 -384
  155. data/rdoc/Phi.html +0 -98
  156. data/rdoc/Player.html +0 -383
  157. data/rdoc/Rakefile.html +0 -254
  158. data/rdoc/RubyNEAT.html +0 -98
  159. data/rdoc/RubyNEAT/Application.html +0 -105
  160. data/rdoc/SDL.html +0 -98
  161. data/rdoc/SDL/Event2.html +0 -98
  162. data/rdoc/Vector.html +0 -195
  163. data/rdoc/created.rid +0 -125
  164. data/rdoc/doc/ControllerPoint_html.html +0 -299
  165. data/rdoc/doc/CuteA_html.html +0 -438
  166. data/rdoc/doc/CuteB_html.html +0 -436
  167. data/rdoc/doc/DSL_html.html +0 -992
  168. data/rdoc/doc/NEAT/BasicNeuronTypes/BiasNeuron_html.html +0 -617
  169. data/rdoc/doc/NEAT/BasicNeuronTypes/CosineNeuron_html.html +0 -413
  170. data/rdoc/doc/NEAT/BasicNeuronTypes/InputNeuron_html.html +0 -498
  171. data/rdoc/doc/NEAT/BasicNeuronTypes/SigmoidNeuron_html.html +0 -413
  172. data/rdoc/doc/NEAT/BasicNeuronTypes/SineNeuron_html.html +0 -413
  173. data/rdoc/doc/NEAT/BasicNeuronTypes/TanhNeuron_html.html +0 -412
  174. data/rdoc/doc/NEAT/BasicNeuronTypes_html.html +0 -310
  175. data/rdoc/doc/NEAT/Controller/NeatSettings_html.html +0 -3324
  176. data/rdoc/doc/NEAT/Controller_html.html +0 -2212
  177. data/rdoc/doc/NEAT/Critter/Genotype/Gene_html.html +0 -997
  178. data/rdoc/doc/NEAT/Critter/Genotype_html.html +0 -1556
  179. data/rdoc/doc/NEAT/Critter/Phenotype_html.html +0 -687
  180. data/rdoc/doc/NEAT/Critter_html.html +0 -1037
  181. data/rdoc/doc/NEAT/DSL_html.html +0 -1349
  182. data/rdoc/doc/NEAT/Evaluator_html.html +0 -556
  183. data/rdoc/doc/NEAT/Evolver/CritterOp_html.html +0 -690
  184. data/rdoc/doc/NEAT/Evolver_html.html +0 -677
  185. data/rdoc/doc/NEAT/Expressor_html.html +0 -468
  186. data/rdoc/doc/NEAT/Graph/DependencyResolver_html.html +0 -598
  187. data/rdoc/doc/NEAT/Graph/GraphException_html.html +0 -299
  188. data/rdoc/doc/NEAT/Graph_html.html +0 -527
  189. data/rdoc/doc/NEAT/NeatException_html.html +0 -299
  190. data/rdoc/doc/NEAT/NeatOb_html.html +0 -671
  191. data/rdoc/doc/NEAT/Neuron_html.html +0 -1095
  192. data/rdoc/doc/NEAT/Operator_html.html +0 -337
  193. data/rdoc/doc/NEAT/Population_html.html +0 -1795
  194. data/rdoc/doc/NEAT/Trait_html.html +0 -344
  195. data/rdoc/doc/NEAT_html.html +0 -736
  196. data/rdoc/doc/_index_html.html +0 -559
  197. data/rdoc/doc/class_list_html.html +0 -369
  198. data/rdoc/doc/css/common_css.html +0 -188
  199. data/rdoc/doc/css/full_list_css.html +0 -243
  200. data/rdoc/doc/css/style_css.html +0 -530
  201. data/rdoc/doc/file_list_html.html +0 -240
  202. data/rdoc/doc/frames_html.html +0 -217
  203. data/rdoc/doc/index_html.html +0 -559
  204. data/rdoc/doc/js/app_js.html +0 -423
  205. data/rdoc/doc/js/full_list_js.html +0 -372
  206. data/rdoc/doc/js/jquery_js.html +0 -1536
  207. data/rdoc/doc/method_list_html.html +0 -1375
  208. data/rdoc/doc/top-level-namespace_html.html +0 -317
  209. data/rdoc/fonts.css +0 -167
  210. data/rdoc/fonts/Lato-Light.ttf +0 -0
  211. data/rdoc/fonts/Lato-LightItalic.ttf +0 -0
  212. data/rdoc/fonts/Lato-Regular.ttf +0 -0
  213. data/rdoc/fonts/Lato-RegularItalic.ttf +0 -0
  214. data/rdoc/fonts/SourceCodePro-Bold.ttf +0 -0
  215. data/rdoc/fonts/SourceCodePro-Regular.ttf +0 -0
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  217. data/rdoc/images/arrow_up.png +0 -0
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  226. data/rdoc/images/find.png +0 -0
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  234. data/rdoc/images/ruby.png +0 -0
  235. data/rdoc/images/tag_blue.png +0 -0
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  237. data/rdoc/images/transparent.png +0 -0
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  239. data/rdoc/images/wrench_orange.png +0 -0
  240. data/rdoc/images/zoom.png +0 -0
  241. data/rdoc/index.html +0 -282
  242. data/rdoc/js/darkfish.js +0 -140
  243. data/rdoc/js/jquery.js +0 -18
  244. data/rdoc/js/navigation.js +0 -142
  245. data/rdoc/js/search.js +0 -109
  246. data/rdoc/js/search_index.js +0 -1
  247. data/rdoc/js/searcher.js +0 -228
  248. data/rdoc/rdoc.css +0 -580
  249. data/rdoc/rubyneat_gemspec.html +0 -387
  250. data/rdoc/table_of_contents.html +0 -2502
  251. data/rdoc/xordebug_log.html +0 -170598
  252. data/rdoc/xorsin_log.html +0 -22569
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- <h1 id="class-NEAT::Operator-label-Base+class+of+operators+in+RubyNEAT%2C">Base class of operators in <a href="../RubyNEAT.html">RubyNEAT</a>,<span><a href="#class-NEAT::Operator-label-Base+class+of+operators+in+RubyNEAT%2C">&para;</a> <a href="#documentation">&uarr;</a></span></h1>
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86
- <li ><a href="#method-i-evolve">#evolve</a>
87
-
88
- <li ><a href="#method-i-express-21">#express!</a>
89
-
90
- <li ><a href="#method-i-initialize_for_recurrence-21">#initialize_for_recurrence!</a>
91
-
92
- <li ><a href="#method-i-mutate-21">#mutate!</a>
93
-
94
- <li ><a href="#method-i-report">#report</a>
95
-
96
- <li ><a href="#method-i-report_best_fit">#report_best_fit</a>
97
-
98
- <li ><a href="#method-i-report_fitness">#report_fitness</a>
99
-
100
- <li ><a href="#method-i-report_fitness_species">#report_fitness_species</a>
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-
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- <li ><a href="#method-i-report_worst_fit">#report_worst_fit</a>
103
-
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- <li ><a href="#method-i-speciate-21">#speciate!</a>
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-
106
- <li ><a href="#method-i-worst_critter">#worst_critter</a>
107
-
108
- </ul>
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- </div>
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-
111
- </div>
112
- </nav>
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-
114
- <main role="main" aria-labelledby="class-NEAT::Population">
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- <h1 id="class-NEAT::Population" class="class">
116
- class NEAT::Population
117
- </h1>
118
-
119
- <section class="description">
120
-
121
- <h1 id="class-NEAT::Population-label-Population+of+NEAT+Critters."><a href="Population.html">Population</a> of <a href="../NEAT.html">NEAT</a> Critters.<span><a href="#class-NEAT::Population-label-Population+of+NEAT+Critters.">&para;</a> <a href="#documentation">&uarr;</a></span></h1>
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-
123
- <pre>The Population
124
- In ourselves we have the pool of neurons the critters all use.
125
- the pool of neurons are indirects, of course, as during phenotype
126
- expression, all the phenotypes shall be created individually.</pre>
127
-
128
- </section>
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-
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-
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-
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- <section id="5Buntitled-5D" class="documentation-section">
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-
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-
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- <section class="attribute-method-details" class="method-section">
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- <header>
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- <h3>Attributes</h3>
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- </header>
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-
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-
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- <div id="attribute-i-critters" class="method-detail">
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- <div class="method-heading attribute-method-heading">
149
- <span class="method-name">critters</span><span
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- class="attribute-access-type">[RW]</span>
151
- </div>
152
-
153
- <div class="method-description">
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-
155
- <p>list of critter in this population</p>
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-
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- </div>
158
- </div>
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-
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- <div id="attribute-i-fitness" class="method-detail">
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- <div class="method-heading attribute-method-heading">
162
- <span class="method-name">fitness</span><span
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- class="attribute-access-type">[R]</span>
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- </div>
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-
166
- <div class="method-description">
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-
168
- <p>Overall population fitness and novelty</p>
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-
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- </div>
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- </div>
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-
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- <div id="attribute-i-hidden_neurons" class="method-detail">
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- <div class="method-heading attribute-method-heading">
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- <span class="method-name">hidden_neurons</span><span
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- class="attribute-access-type">[RW]</span>
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- </div>
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-
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- <div class="method-description">
180
-
181
- <p>List of possible neuron classes for hidden neurons.</p>
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-
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- </div>
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- </div>
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-
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- <div id="attribute-i-input_neurons" class="method-detail">
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- <div class="method-heading attribute-method-heading">
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- <span class="method-name">input_neurons</span><span
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- class="attribute-access-type">[RW]</span>
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- </div>
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-
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- <div class="method-description">
193
-
194
- <p>Ordered list or hash of input neuron classes (all critters generated here
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- shall have this)</p>
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-
197
- </div>
198
- </div>
199
-
200
- <div id="attribute-i-novelty" class="method-detail">
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- <div class="method-heading attribute-method-heading">
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- <span class="method-name">novelty</span><span
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- class="attribute-access-type">[R]</span>
204
- </div>
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-
206
- <div class="method-description">
207
-
208
- <p>Overall population fitness and novelty</p>
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-
210
- </div>
211
- </div>
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-
213
- <div id="attribute-i-output_neurons" class="method-detail">
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- <div class="method-heading attribute-method-heading">
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- <span class="method-name">output_neurons</span><span
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- class="attribute-access-type">[RW]</span>
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- </div>
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-
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- <div class="method-description">
220
-
221
- <p>Ordered list or hash of output neuron classes (all critters generated here
222
- shall have this)</p>
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-
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- </div>
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- </div>
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-
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- <div id="attribute-i-species" class="method-detail">
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- <div class="method-heading attribute-method-heading">
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- <span class="method-name">species</span><span
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- class="attribute-access-type">[R]</span>
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- </div>
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-
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- <div class="method-description">
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-
235
- <p>Hash list of species lists</p>
236
-
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- </div>
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- </div>
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-
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- <div id="attribute-i-traits" class="method-detail">
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- <div class="method-heading attribute-method-heading">
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- <span class="method-name">traits</span><span
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- class="attribute-access-type">[RW]</span>
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- </div>
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-
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- <div class="method-description">
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-
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-
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-
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- </div>
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- </div>
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-
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- </section>
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-
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-
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-
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- <section id="public-class-5Buntitled-5D-method-details" class="method-section">
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- <header>
259
- <h3>Public Class Methods</h3>
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- </header>
261
-
262
-
263
- <div id="method-c-new" class="method-detail ">
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-
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- <div class="method-heading">
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- <span class="method-name">new</span><span
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- class="method-args">(c, &block)</span>
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-
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- <span class="method-click-advice">click to toggle source</span>
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-
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- </div>
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-
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-
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- <div class="method-description">
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-
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- <p>Create initial (ramdom) population of critters</p>
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-
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-
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- <div class="method-calls-super">
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- Calls superclass method
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-
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- </div>
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-
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-
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-
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- <div class="method-source-code" id="new-source">
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- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 37</span>
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- <span class="ruby-keyword">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">c</span>, <span class="ruby-operator">&amp;</span><span class="ruby-identifier">block</span>)
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- <span class="ruby-keyword">super</span>
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- <span class="ruby-ivar">@input_neurons</span> = <span class="ruby-identifier">c</span>.<span class="ruby-identifier">neural_inputs</span>.<span class="ruby-identifier">clone</span>
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- <span class="ruby-ivar">@output_neurons</span> = <span class="ruby-identifier">c</span>.<span class="ruby-identifier">neural_outputs</span>.<span class="ruby-identifier">clone</span>
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- <span class="ruby-ivar">@hidden_neurons</span> = <span class="ruby-keyword">unless</span> <span class="ruby-identifier">c</span>.<span class="ruby-identifier">neural_hidden</span>.<span class="ruby-identifier">nil?</span>
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- <span class="ruby-identifier">c</span>.<span class="ruby-identifier">neural_hidden</span>
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- <span class="ruby-keyword">else</span>
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- <span class="ruby-identifier">c</span>.<span class="ruby-identifier">neuron_catalog</span>.<span class="ruby-identifier">keep_if</span> {<span class="ruby-operator">|</span><span class="ruby-identifier">n</span><span class="ruby-operator">|</span> <span class="ruby-keyword">not</span> <span class="ruby-identifier">n</span>.<span class="ruby-identifier">input?</span>}
296
- <span class="ruby-keyword">end</span>
297
- <span class="ruby-ivar">@critters</span> = (<span class="ruby-value">0</span> <span class="ruby-operator">...</span> <span class="ruby-identifier">c</span>.<span class="ruby-identifier">parms</span>.<span class="ruby-identifier">start_population_size</span> <span class="ruby-operator">||</span> <span class="ruby-identifier">c</span>.<span class="ruby-identifier">parms</span>.<span class="ruby-identifier">population_size</span>).<span class="ruby-identifier">map</span> <span class="ruby-keyword">do</span>
298
- <span class="ruby-constant">Critter</span>.<span class="ruby-identifier">new</span>(<span class="ruby-keyword">self</span>)
299
- <span class="ruby-keyword">end</span>
300
- <span class="ruby-identifier">block</span>.(<span class="ruby-keyword">self</span>) <span class="ruby-keyword">unless</span> <span class="ruby-identifier">block</span>.<span class="ruby-identifier">nil?</span>
301
- <span class="ruby-keyword">end</span></pre>
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- </div>
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-
304
- </div>
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-
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-
307
-
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-
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- </div>
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-
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-
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- </section>
313
-
314
- <section id="public-instance-5Buntitled-5D-method-details" class="method-section">
315
- <header>
316
- <h3>Public Instance Methods</h3>
317
- </header>
318
-
319
-
320
- <div id="method-i-analyze-21" class="method-detail ">
321
-
322
- <div class="method-heading">
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- <span class="method-name">analyze!</span><span
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- class="method-args">()</span>
325
-
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- <span class="method-click-advice">click to toggle source</span>
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-
328
- </div>
329
-
330
-
331
- <div class="method-description">
332
-
333
- <p>Alalyze evaluation results.</p>
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-
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-
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-
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-
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- <div class="method-source-code" id="analyze-21-source">
339
- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 74</span>
340
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">analyze!</span>
341
- <span class="ruby-ivar">@critters</span>.<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">critter</span><span class="ruby-operator">|</span> <span class="ruby-ivar">@controller</span>.<span class="ruby-identifier">evaluator</span>.<span class="ruby-identifier">analyze_for_fitness!</span> <span class="ruby-identifier">critter</span> }
342
- <span class="ruby-keyword">end</span></pre>
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- </div>
344
-
345
- </div>
346
-
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-
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-
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-
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- </div>
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-
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-
353
- <div id="method-i-best_critter" class="method-detail ">
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-
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- <div class="method-heading">
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- <span class="method-name">best_critter</span><span
357
- class="method-args">()</span>
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-
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- <span class="method-click-advice">click to toggle source</span>
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-
361
- </div>
362
-
363
-
364
- <div class="method-description">
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-
366
- <p>The “best critter” is the critter with the lowest (closet to zero) fitness
367
- rating.</p>
368
-
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-
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-
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-
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- <div class="method-source-code" id="best_critter-source">
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- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 176</span>
374
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">best_critter</span>
375
- <span class="ruby-keyword">unless</span> <span class="ruby-ivar">@controller</span>.<span class="ruby-identifier">compare_func</span>.<span class="ruby-identifier">nil?</span>
376
- <span class="ruby-ivar">@critters</span>.<span class="ruby-identifier">min</span> {<span class="ruby-operator">|</span><span class="ruby-identifier">a</span>, <span class="ruby-identifier">b</span><span class="ruby-operator">|</span> <span class="ruby-ivar">@controller</span>.<span class="ruby-identifier">compare_func</span>.(<span class="ruby-identifier">a</span>.<span class="ruby-identifier">fitness</span>, <span class="ruby-identifier">b</span>.<span class="ruby-identifier">fitness</span>) }
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- <span class="ruby-keyword">else</span>
378
- <span class="ruby-ivar">@critters</span>.<span class="ruby-identifier">min</span> {<span class="ruby-operator">|</span><span class="ruby-identifier">a</span>, <span class="ruby-identifier">b</span><span class="ruby-operator">|</span> <span class="ruby-identifier">a</span>.<span class="ruby-identifier">fitness</span> <span class="ruby-operator">&lt;=&gt;</span> <span class="ruby-identifier">b</span>.<span class="ruby-identifier">fitness</span>}
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- <span class="ruby-keyword">end</span>
380
- <span class="ruby-keyword">end</span></pre>
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- </div>
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-
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- </div>
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-
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-
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-
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-
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- </div>
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-
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-
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- <div id="method-i-dump_s" class="method-detail ">
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-
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- <div class="method-heading">
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- <span class="method-name">dump_s</span><span
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- class="method-args">()</span>
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-
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- <span class="method-click-advice">click to toggle source</span>
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-
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- </div>
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-
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-
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- <div class="method-description">
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-
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-
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-
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-
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-
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- <div class="method-source-code" id="dump_s-source">
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- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 194</span>
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- <span class="ruby-keyword">def</span> <span class="ruby-identifier">dump_s</span>
412
- <span class="ruby-identifier">to_s</span> <span class="ruby-operator">+</span> <span class="ruby-string">&quot;\npopulation:\n&quot;</span> <span class="ruby-operator">+</span> <span class="ruby-ivar">@critters</span>.<span class="ruby-identifier">map</span>{<span class="ruby-operator">|</span><span class="ruby-identifier">crit</span><span class="ruby-operator">|</span> <span class="ruby-identifier">crit</span>.<span class="ruby-identifier">dump_s</span> }.<span class="ruby-identifier">join</span>(<span class="ruby-string">&quot;\n&quot;</span>)
413
- <span class="ruby-keyword">end</span></pre>
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- </div>
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-
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- </div>
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-
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-
419
-
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-
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- </div>
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-
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-
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- <div id="method-i-evaluate-21" class="method-detail ">
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-
426
- <div class="method-heading">
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- <span class="method-name">evaluate!</span><span
428
- class="method-args">()</span>
429
-
430
- <span class="method-click-advice">click to toggle source</span>
431
-
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- </div>
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-
434
-
435
- <div class="method-description">
436
-
437
- <p>Called for each sequence.</p>
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-
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-
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-
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-
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- <div class="method-source-code" id="evaluate-21-source">
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- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 69</span>
444
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">evaluate!</span>
445
- <span class="ruby-ivar">@critters</span>.<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">critter</span><span class="ruby-operator">|</span> <span class="ruby-identifier">critter</span>.<span class="ruby-identifier">evaluate!</span> }
446
- <span class="ruby-keyword">end</span></pre>
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- </div>
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-
449
- </div>
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-
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-
452
-
453
-
454
- </div>
455
-
456
-
457
- <div id="method-i-evolve" class="method-detail ">
458
-
459
- <div class="method-heading">
460
- <span class="method-name">evolve</span><span
461
- class="method-args">()</span>
462
-
463
- <span class="method-click-advice">click to toggle source</span>
464
-
465
- </div>
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-
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-
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- <div class="method-description">
469
-
470
- <p>Call this after evaluation. Returns a newly-evolved population.</p>
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-
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-
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-
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-
475
- <div class="method-source-code" id="evolve-source">
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- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 80</span>
477
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">evolve</span>
478
- <span class="ruby-ivar">@controller</span>.<span class="ruby-identifier">evolver</span>.<span class="ruby-identifier">evolve</span> <span class="ruby-keyword">self</span>
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- <span class="ruby-keyword">end</span></pre>
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- </div>
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-
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- </div>
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-
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-
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-
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-
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- </div>
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-
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-
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- <div id="method-i-express-21" class="method-detail ">
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-
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- <div class="method-heading">
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- <span class="method-name">express!</span><span
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- class="method-args">()</span>
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-
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- <span class="method-click-advice">click to toggle source</span>
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-
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- </div>
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-
500
-
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- <div class="method-description">
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-
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- <p>Express the entire population.</p>
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-
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-
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-
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-
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- <div class="method-source-code" id="express-21-source">
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- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 64</span>
510
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">express!</span>
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- <span class="ruby-ivar">@critters</span>.<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">critter</span><span class="ruby-operator">|</span> <span class="ruby-identifier">critter</span>.<span class="ruby-identifier">express!</span> }
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- <span class="ruby-keyword">end</span></pre>
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- </div>
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-
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- </div>
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-
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-
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-
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-
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- </div>
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-
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-
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- <div id="method-i-initialize_for_recurrence-21" class="method-detail ">
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-
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- <div class="method-heading">
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- <span class="method-name">initialize_for_recurrence!</span><span
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- class="method-args">()</span>
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-
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- <span class="method-click-advice">click to toggle source</span>
530
-
531
- </div>
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-
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-
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- <div class="method-description">
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-
536
- <p>Make sure all critters are reset and prepared for recurrent network
537
- evaluation.</p>
538
-
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-
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-
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-
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- <div class="method-source-code" id="initialize_for_recurrence-21-source">
543
- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 54</span>
544
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">initialize_for_recurrence!</span>
545
- <span class="ruby-ivar">@critters</span>.<span class="ruby-identifier">each</span> {<span class="ruby-operator">|</span><span class="ruby-identifier">crit</span><span class="ruby-operator">|</span> <span class="ruby-identifier">crit</span>.<span class="ruby-identifier">initialize_neurons!</span>}
546
- <span class="ruby-keyword">end</span></pre>
547
- </div>
548
-
549
- </div>
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-
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-
552
-
553
-
554
- </div>
555
-
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-
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- <div id="method-i-mutate-21" class="method-detail ">
558
-
559
- <div class="method-heading">
560
- <span class="method-name">mutate!</span><span
561
- class="method-args">()</span>
562
-
563
- <span class="method-click-advice">click to toggle source</span>
564
-
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- </div>
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-
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-
568
- <div class="method-description">
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-
570
- <p>Mutate the genes and neurons.</p>
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-
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-
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-
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-
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- <div class="method-source-code" id="mutate-21-source">
576
- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 59</span>
577
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">mutate!</span>
578
- <span class="ruby-ivar">@controller</span>.<span class="ruby-identifier">evolver</span>.<span class="ruby-identifier">mutate!</span> <span class="ruby-keyword">self</span>
579
- <span class="ruby-keyword">end</span></pre>
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- </div>
581
-
582
- </div>
583
-
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-
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-
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-
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- </div>
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-
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-
590
- <div id="method-i-report" class="method-detail ">
591
-
592
- <div class="method-heading">
593
- <span class="method-name">report</span><span
594
- class="method-args">()</span>
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-
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- <span class="method-click-advice">click to toggle source</span>
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-
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- </div>
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-
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-
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- <div class="method-description">
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-
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- <h2 id="method-i-report-label-Generate+a+report+on+the+state+of+this+population.">Generate a report on the state of this population.<span><a href="#method-i-report-label-Generate+a+report+on+the+state+of+this+population.">&para;</a> <a href="#documentation">&uarr;</a></span></h2>
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-
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-
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-
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-
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- <div class="method-source-code" id="report-source">
609
- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 165</span>
610
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">report</span>
611
- {
612
- <span class="ruby-identifier">fitness</span><span class="ruby-operator">:</span> <span class="ruby-identifier">report_fitness</span>,
613
- <span class="ruby-identifier">fitness_species</span><span class="ruby-operator">:</span> <span class="ruby-identifier">report_fitness_species</span>,
614
- <span class="ruby-identifier">best_critter</span><span class="ruby-operator">:</span> <span class="ruby-identifier">report_best_fit</span>,
615
- <span class="ruby-identifier">worst_critter</span><span class="ruby-operator">:</span> <span class="ruby-identifier">report_worst_fit</span>,
616
- }
617
- <span class="ruby-keyword">end</span></pre>
618
- </div>
619
-
620
- </div>
621
-
622
-
623
-
624
-
625
- </div>
626
-
627
-
628
- <div id="method-i-speciate-21" class="method-detail ">
629
-
630
- <div class="method-heading">
631
- <span class="method-name">speciate!</span><span
632
- class="method-args">()</span>
633
-
634
- <span class="method-click-advice">click to toggle source</span>
635
-
636
- </div>
637
-
638
-
639
- <div class="method-description">
640
-
641
- <pre>Group critters into species
642
- Note that the @species objects
643
- have useful singleton methods:</pre>
644
- <ul><li>
645
- <p>@species.member? – checks all of the lists for membership, not just the
646
- hash</p>
647
- </li><li>
648
- <p>@<a href="crit">species</a>.fitness – fitness of the entire species</p>
649
- </li></ul>
650
-
651
-
652
-
653
-
654
- <div class="method-source-code" id="speciate-21-source">
655
- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 89</span>
656
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">speciate!</span>
657
- <span class="ruby-comment"># We blow away existing species and create our own member? function</span>
658
- <span class="ruby-ivar">@species</span> = {} <span class="ruby-comment"># lists keyed by representative critter</span>
659
- <span class="ruby-keyword">def</span> <span class="ruby-ivar">@species</span>.<span class="ruby-identifier">member?</span>(<span class="ruby-identifier">crit</span>)
660
- <span class="ruby-keyword">super</span>.<span class="ruby-identifier">member?</span>(<span class="ruby-identifier">crit</span>) <span class="ruby-keyword">or</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">map</span>{<span class="ruby-operator">|</span><span class="ruby-identifier">k</span>, <span class="ruby-identifier">li</span><span class="ruby-operator">|</span> <span class="ruby-identifier">li</span>.<span class="ruby-identifier">member?</span> <span class="ruby-identifier">crit</span>}.<span class="ruby-identifier">reduce</span>{<span class="ruby-operator">|</span><span class="ruby-identifier">t1</span>, <span class="ruby-identifier">t2</span><span class="ruby-operator">|</span> <span class="ruby-identifier">t1</span> <span class="ruby-keyword">or</span> <span class="ruby-identifier">t2</span> }
661
- <span class="ruby-keyword">end</span>
662
-
663
- <span class="ruby-keyword">def</span> <span class="ruby-ivar">@species</span>.<span class="ruby-identifier">evaluate!</span>
664
- <span class="ruby-keyword">self</span>.<span class="ruby-identifier">each</span> <span class="ruby-keyword">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">k</span>, <span class="ruby-identifier">sp</span><span class="ruby-operator">|</span>
665
- <span class="ruby-identifier">sp</span>.<span class="ruby-identifier">fitness</span> = <span class="ruby-identifier">sp</span>.<span class="ruby-identifier">map</span>{<span class="ruby-operator">|</span><span class="ruby-identifier">crit</span><span class="ruby-operator">|</span> <span class="ruby-identifier">crit</span>.<span class="ruby-identifier">fitness</span>}.<span class="ruby-identifier">reduce</span>{<span class="ruby-operator">|</span><span class="ruby-identifier">a</span>,<span class="ruby-identifier">b</span><span class="ruby-operator">|</span> <span class="ruby-identifier">a</span><span class="ruby-operator">+</span><span class="ruby-identifier">b</span>} <span class="ruby-operator">/</span> <span class="ruby-identifier">sp</span>.<span class="ruby-identifier">size</span>
666
- <span class="ruby-keyword">end</span>
667
- <span class="ruby-keyword">end</span>
668
-
669
- <span class="ruby-keyword">def</span> <span class="ruby-ivar">@species</span>.<span class="ruby-identifier">compactify!</span>(<span class="ruby-identifier">parm</span>)
670
- <span class="ruby-identifier">mutt</span> = <span class="ruby-keyword">self</span>[<span class="ruby-value">:mutt</span>] = <span class="ruby-keyword">self</span>.<span class="ruby-identifier">map</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">k</span>, <span class="ruby-identifier">splist</span><span class="ruby-operator">|</span> [<span class="ruby-identifier">k</span>, <span class="ruby-identifier">splist</span>]}.<span class="ruby-identifier">reject</span> {<span class="ruby-operator">|</span><span class="ruby-identifier">k</span>, <span class="ruby-identifier">splist</span><span class="ruby-operator">|</span>
671
- <span class="ruby-identifier">splist</span>.<span class="ruby-identifier">size</span> <span class="ruby-operator">&gt;=</span> <span class="ruby-identifier">parm</span>.<span class="ruby-identifier">smallest_species</span>
672
- }.<span class="ruby-identifier">map</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">k</span>, <span class="ruby-identifier">splist</span><span class="ruby-operator">|</span>
673
- <span class="ruby-keyword">self</span>.<span class="ruby-identifier">delete</span> <span class="ruby-identifier">k</span>
674
- <span class="ruby-identifier">splist</span>
675
- }.<span class="ruby-identifier">flatten</span>
676
-
677
- <span class="ruby-comment"># FIXME this code is not dry!!!!</span>
678
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">mutt</span>.<span class="ruby-identifier">fitness=</span>(<span class="ruby-identifier">fit</span>)
679
- <span class="ruby-ivar">@fitness</span> = <span class="ruby-identifier">fit</span>
680
- <span class="ruby-keyword">end</span>
681
-
682
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">mutt</span>.<span class="ruby-identifier">fitness</span>
683
- <span class="ruby-ivar">@fitness</span>
684
- <span class="ruby-keyword">end</span>
685
-
686
- <span class="ruby-keyword">self</span>.<span class="ruby-identifier">delete</span> <span class="ruby-value">:mutt</span> <span class="ruby-keyword">if</span> <span class="ruby-keyword">self</span>[<span class="ruby-value">:mutt</span>].<span class="ruby-identifier">empty?</span>
687
- <span class="ruby-keyword">end</span>
688
-
689
- <span class="ruby-comment"># Some convience parms</span>
690
- <span class="ruby-identifier">parm</span> = <span class="ruby-ivar">@controller</span>.<span class="ruby-identifier">parms</span>
691
-
692
- <span class="ruby-comment"># And so now we iterate...</span>
693
- <span class="ruby-ivar">@critters</span>.<span class="ruby-identifier">each</span> <span class="ruby-keyword">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">crit</span><span class="ruby-operator">|</span>
694
- <span class="ruby-identifier">wearein</span> = <span class="ruby-keyword">false</span>
695
- <span class="ruby-ivar">@species</span>.<span class="ruby-identifier">each</span> <span class="ruby-keyword">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">ck</span>, <span class="ruby-identifier">list</span><span class="ruby-operator">|</span>
696
- <span class="ruby-identifier">delta</span> = <span class="ruby-identifier">crit</span>.<span class="ruby-identifier">compare</span>(<span class="ruby-identifier">ck</span>)
697
- <span class="ruby-comment">#log.debug { &quot;delta for #{crit} and #{ck} is #{delta}&quot; }</span>
698
- <span class="ruby-keyword">if</span> <span class="ruby-identifier">delta</span> <span class="ruby-operator">&lt;</span> <span class="ruby-identifier">parm</span>.<span class="ruby-identifier">compatibility_threshold</span>
699
- <span class="ruby-identifier">list</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-identifier">crit</span>
700
- <span class="ruby-identifier">wearein</span> = <span class="ruby-keyword">true</span>
701
- <span class="ruby-keyword">break</span>
702
- <span class="ruby-keyword">end</span>
703
- <span class="ruby-keyword">end</span>
704
-
705
- <span class="ruby-comment"># New species?</span>
706
- <span class="ruby-keyword">unless</span> <span class="ruby-identifier">wearein</span>
707
- <span class="ruby-ivar">@species</span>[<span class="ruby-identifier">crit</span>] = <span class="ruby-identifier">species</span> = [<span class="ruby-identifier">crit</span>]
708
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">species</span>.<span class="ruby-identifier">fitness=</span>(<span class="ruby-identifier">fit</span>)
709
- <span class="ruby-ivar">@fitness</span> = <span class="ruby-identifier">fit</span>
710
- <span class="ruby-keyword">end</span>
711
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">species</span>.<span class="ruby-identifier">fitness</span>
712
- <span class="ruby-ivar">@fitness</span>
713
- <span class="ruby-keyword">end</span>
714
- <span class="ruby-keyword">end</span>
715
- <span class="ruby-keyword">end</span>
716
-
717
- <span class="ruby-comment"># Compactify the species if less than smallest_species</span>
718
- <span class="ruby-ivar">@species</span>.<span class="ruby-identifier">compactify!</span> <span class="ruby-identifier">parm</span>
719
-
720
- <span class="ruby-comment"># And now we evaluate all species for fitness...</span>
721
- <span class="ruby-ivar">@species</span>.<span class="ruby-identifier">evaluate!</span>
722
-
723
- <span class="ruby-comment"># Dump for debugging reasons</span>
724
- <span class="ruby-ivar">@species</span>.<span class="ruby-identifier">each</span> <span class="ruby-keyword">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">k</span>, <span class="ruby-identifier">sp</span><span class="ruby-operator">|</span>
725
- <span class="ruby-identifier">log</span>.<span class="ruby-identifier">debug</span> <span class="ruby-node">&quot;&gt;&gt; Species #{k} has #{sp.size} members with a #{sp.fitness} fitness&quot;</span>
726
- <span class="ruby-keyword">end</span>
727
-
728
- <span class="ruby-keyword">end</span></pre>
729
- </div>
730
-
731
- </div>
732
-
733
-
734
-
735
-
736
- </div>
737
-
738
-
739
- <div id="method-i-worst_critter" class="method-detail ">
740
-
741
- <div class="method-heading">
742
- <span class="method-name">worst_critter</span><span
743
- class="method-args">()</span>
744
-
745
- <span class="method-click-advice">click to toggle source</span>
746
-
747
- </div>
748
-
749
-
750
- <div class="method-description">
751
-
752
- <p>The “worst critter” is the critter with the highest (away from zero)
753
- fitness rating.</p>
754
-
755
-
756
-
757
-
758
- <div class="method-source-code" id="worst_critter-source">
759
- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 186</span>
760
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">worst_critter</span>
761
- <span class="ruby-keyword">unless</span> <span class="ruby-ivar">@controller</span>.<span class="ruby-identifier">compare_func</span>.<span class="ruby-identifier">nil?</span>
762
- <span class="ruby-ivar">@critters</span>.<span class="ruby-identifier">max</span> {<span class="ruby-operator">|</span><span class="ruby-identifier">a</span>, <span class="ruby-identifier">b</span><span class="ruby-operator">|</span> <span class="ruby-ivar">@controller</span>.<span class="ruby-identifier">compare_func</span>.(<span class="ruby-identifier">a</span>.<span class="ruby-identifier">fitness</span>, <span class="ruby-identifier">b</span>.<span class="ruby-identifier">fitness</span>) }
763
- <span class="ruby-keyword">else</span>
764
- <span class="ruby-ivar">@critters</span>.<span class="ruby-identifier">max</span> {<span class="ruby-operator">|</span><span class="ruby-identifier">a</span>, <span class="ruby-identifier">b</span><span class="ruby-operator">|</span> <span class="ruby-identifier">a</span>.<span class="ruby-identifier">fitness</span> <span class="ruby-operator">&lt;=&gt;</span> <span class="ruby-identifier">b</span>.<span class="ruby-identifier">fitness</span>}
765
- <span class="ruby-keyword">end</span>
766
- <span class="ruby-keyword">end</span></pre>
767
- </div>
768
-
769
- </div>
770
-
771
-
772
-
773
-
774
- </div>
775
-
776
-
777
- </section>
778
-
779
- <section id="protected-instance-5Buntitled-5D-method-details" class="method-section">
780
- <header>
781
- <h3>Protected Instance Methods</h3>
782
- </header>
783
-
784
-
785
- <div id="method-i-report_best_fit" class="method-detail ">
786
-
787
- <div class="method-heading">
788
- <span class="method-name">report_best_fit</span><span
789
- class="method-args">()</span>
790
-
791
- <span class="method-click-advice">click to toggle source</span>
792
-
793
- </div>
794
-
795
-
796
- <div class="method-description">
797
-
798
- <p>Find the best fit critter</p>
799
-
800
-
801
-
802
-
803
- <div class="method-source-code" id="report_best_fit-source">
804
- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 217</span>
805
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">report_best_fit</span>
806
- <span class="ruby-identifier">best_critter</span>.<span class="ruby-identifier">phenotype</span>.<span class="ruby-identifier">code</span>
807
- <span class="ruby-keyword">end</span></pre>
808
- </div>
809
-
810
- </div>
811
-
812
-
813
-
814
-
815
- </div>
816
-
817
-
818
- <div id="method-i-report_fitness" class="method-detail ">
819
-
820
- <div class="method-heading">
821
- <span class="method-name">report_fitness</span><span
822
- class="method-args">()</span>
823
-
824
- <span class="method-click-advice">click to toggle source</span>
825
-
826
- </div>
827
-
828
-
829
- <div class="method-description">
830
-
831
- <p>report on many fitness metrics</p>
832
-
833
-
834
-
835
-
836
- <div class="method-source-code" id="report_fitness-source">
837
- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 200</span>
838
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">report_fitness</span>
839
- {
840
- <span class="ruby-identifier">overall</span><span class="ruby-operator">:</span> <span class="ruby-ivar">@critters</span>.<span class="ruby-identifier">map</span>{<span class="ruby-operator">|</span><span class="ruby-identifier">critter</span><span class="ruby-operator">|</span> <span class="ruby-identifier">critter</span>.<span class="ruby-identifier">fitness</span>}.<span class="ruby-identifier">reduce</span>{<span class="ruby-operator">|</span><span class="ruby-identifier">m</span>, <span class="ruby-identifier">f</span><span class="ruby-operator">|</span> <span class="ruby-identifier">m</span> <span class="ruby-operator">+</span> <span class="ruby-identifier">f</span>} <span class="ruby-operator">/</span> <span class="ruby-ivar">@critters</span>.<span class="ruby-identifier">size</span>,
841
- <span class="ruby-identifier">best</span><span class="ruby-operator">:</span> <span class="ruby-identifier">best_critter</span>.<span class="ruby-identifier">fitness</span>,
842
- <span class="ruby-identifier">worst</span><span class="ruby-operator">:</span> <span class="ruby-identifier">worst_critter</span>.<span class="ruby-identifier">fitness</span>,
843
- }
844
- <span class="ruby-keyword">end</span></pre>
845
- </div>
846
-
847
- </div>
848
-
849
-
850
-
851
-
852
- </div>
853
-
854
-
855
- <div id="method-i-report_fitness_species" class="method-detail ">
856
-
857
- <div class="method-heading">
858
- <span class="method-name">report_fitness_species</span><span
859
- class="method-args">()</span>
860
-
861
- <span class="method-click-advice">click to toggle source</span>
862
-
863
- </div>
864
-
865
-
866
- <div class="method-description">
867
-
868
- <p>report on the best and worst species</p>
869
-
870
-
871
-
872
-
873
- <div class="method-source-code" id="report_fitness_species-source">
874
- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 209</span>
875
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">report_fitness_species</span>
876
- {
877
- <span class="ruby-identifier">best</span><span class="ruby-operator">:</span> <span class="ruby-keyword">nil</span>,
878
- <span class="ruby-identifier">worst</span><span class="ruby-operator">:</span> <span class="ruby-keyword">nil</span>,
879
- }
880
- <span class="ruby-keyword">end</span></pre>
881
- </div>
882
-
883
- </div>
884
-
885
-
886
-
887
-
888
- </div>
889
-
890
-
891
- <div id="method-i-report_worst_fit" class="method-detail ">
892
-
893
- <div class="method-heading">
894
- <span class="method-name">report_worst_fit</span><span
895
- class="method-args">()</span>
896
-
897
- <span class="method-click-advice">click to toggle source</span>
898
-
899
- </div>
900
-
901
-
902
- <div class="method-description">
903
-
904
- <p>Find the worst fit critter</p>
905
-
906
-
907
-
908
-
909
- <div class="method-source-code" id="report_worst_fit-source">
910
- <pre><span class="ruby-comment"># File lib/rubyneat/population.rb, line 222</span>
911
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">report_worst_fit</span>
912
- <span class="ruby-identifier">worst_critter</span>.<span class="ruby-identifier">phenotype</span>.<span class="ruby-identifier">code</span>
913
- <span class="ruby-keyword">end</span></pre>
914
- </div>
915
-
916
- </div>
917
-
918
-
919
-
920
-
921
- </div>
922
-
923
-
924
- </section>
925
-
926
- </section>
927
- </main>
928
-
929
-
930
- <footer id="validator-badges" role="contentinfo">
931
- <p><a href="http://validator.w3.org/check/referer">Validate</a>
932
- <p>Generated by <a href="http://rdoc.rubyforge.org">RDoc</a> 4.1.1.
933
- <p>Based on <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish</a> by <a href="http://deveiate.org">Michael Granger</a>.
934
- </footer>
935
-