rubyneat 0.3.5.alpha.3 → 0.3.5.alpha.5

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Files changed (252) hide show
  1. checksums.yaml +4 -4
  2. data/.semver +1 -1
  3. data/Gemfile +19 -19
  4. data/Gemfile.lock +39 -33
  5. data/README.md +66 -0
  6. data/Rakefile +19 -2
  7. data/bin/neat +4 -60
  8. data/lib/rubyneat/cli.rb +5 -0
  9. data/lib/rubyneat/cli/generate.rb +131 -0
  10. data/lib/rubyneat/cli/main.rb +54 -0
  11. data/lib/rubyneat/cli/templates/generate/Gemfile.tt +17 -0
  12. data/lib/rubyneat/cli/templates/generate/README.md.tt +1 -0
  13. data/lib/rubyneat/cli/templates/generate/bin/neat.tt +14 -0
  14. data/{neater/xor_neat.rb → lib/rubyneat/cli/templates/generate/neater.tt} +7 -22
  15. data/rubyneat.gemspec +73 -297
  16. data/rubyneat.gemspec.orig +384 -0
  17. metadata +76 -292
  18. data/.idea/.name +0 -1
  19. data/.idea/.rakeTasks +0 -7
  20. data/.idea/dictionaries/trader.xml +0 -3
  21. data/.idea/encodings.xml +0 -5
  22. data/.idea/misc.xml +0 -5
  23. data/.idea/modules.xml +0 -9
  24. data/.idea/rubyneat.iml +0 -198
  25. data/.idea/runConfigurations/invpend_neat.xml +0 -26
  26. data/.idea/runConfigurations/sigdebug_neat.xml +0 -24
  27. data/.idea/runConfigurations/xor_neat.xml +0 -26
  28. data/.idea/runConfigurations/xordebug_neat.xml +0 -24
  29. data/.idea/runConfigurations/xorsin_neat.xml +0 -24
  30. data/.idea/scopes/scope_settings.xml +0 -5
  31. data/.idea/vcs.xml +0 -7
  32. data/.idea/workspace.xml +0 -1151
  33. data/.yardoc/checksums +0 -11
  34. data/.yardoc/object_types +0 -0
  35. data/.yardoc/objects/root.dat +0 -0
  36. data/.yardoc/proxy_types +0 -0
  37. data/Guardfile +0 -8
  38. data/doc/ControllerPoint.html +0 -125
  39. data/doc/CuteA.html +0 -286
  40. data/doc/CuteB.html +0 -297
  41. data/doc/DSL.html +0 -883
  42. data/doc/NEAT.html +0 -588
  43. data/doc/NEAT/BasicNeuronTypes.html +0 -136
  44. data/doc/NEAT/BasicNeuronTypes/BiasNeuron.html +0 -518
  45. data/doc/NEAT/BasicNeuronTypes/CosineNeuron.html +0 -274
  46. data/doc/NEAT/BasicNeuronTypes/InputNeuron.html +0 -366
  47. data/doc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +0 -275
  48. data/doc/NEAT/BasicNeuronTypes/SineNeuron.html +0 -274
  49. data/doc/NEAT/BasicNeuronTypes/TanhNeuron.html +0 -274
  50. data/doc/NEAT/Controller.html +0 -2490
  51. data/doc/NEAT/Controller/NeatSettings.html +0 -3985
  52. data/doc/NEAT/Critter.html +0 -1037
  53. data/doc/NEAT/Critter/Genotype.html +0 -1601
  54. data/doc/NEAT/Critter/Genotype/Gene.html +0 -979
  55. data/doc/NEAT/Critter/Phenotype.html +0 -603
  56. data/doc/NEAT/DSL.html +0 -1255
  57. data/doc/NEAT/Evaluator.html +0 -420
  58. data/doc/NEAT/Evolver.html +0 -602
  59. data/doc/NEAT/Evolver/CritterOp.html +0 -551
  60. data/doc/NEAT/Expressor.html +0 -327
  61. data/doc/NEAT/Graph.html +0 -402
  62. data/doc/NEAT/Graph/DependencyResolver.html +0 -478
  63. data/doc/NEAT/Graph/GraphException.html +0 -123
  64. data/doc/NEAT/NeatException.html +0 -123
  65. data/doc/NEAT/NeatOb.html +0 -567
  66. data/doc/NEAT/Neuron.html +0 -1067
  67. data/doc/NEAT/Operator.html +0 -162
  68. data/doc/NEAT/Population.html +0 -1961
  69. data/doc/NEAT/Trait.html +0 -169
  70. data/doc/_index.html +0 -373
  71. data/doc/class_list.html +0 -54
  72. data/doc/css/common.css +0 -1
  73. data/doc/css/full_list.css +0 -57
  74. data/doc/css/style.css +0 -339
  75. data/doc/file_list.html +0 -53
  76. data/doc/frames.html +0 -26
  77. data/doc/index.html +0 -373
  78. data/doc/js/app.js +0 -219
  79. data/doc/js/full_list.js +0 -178
  80. data/doc/js/jquery.js +0 -4
  81. data/doc/method_list.html +0 -1415
  82. data/doc/top-level-namespace.html +0 -164
  83. data/foo/foo_aquarium_example.rb +0 -38
  84. data/foo/foo_gosu.rb +0 -99
  85. data/foo/foo_rubygoo.rb +0 -104
  86. data/foo/foo_sdl.rb +0 -34
  87. data/foo/icon.png +0 -0
  88. data/neater/invpend_neat.rb +0 -150
  89. data/neater/rnlib/inverted_pendulum.rb +0 -380
  90. data/neater/rnlib/xor.rb +0 -10
  91. data/neater/sigdebug_neat.rb +0 -136
  92. data/neater/xoranalog_neat.rb +0 -138
  93. data/neater/xorsin_neat.rb +0 -143
  94. data/projectFilesBackup/.idea/rubyneat.iml +0 -180
  95. data/public/.directory +0 -4
  96. data/public/background.png +0 -0
  97. data/public/background.xcf +0 -0
  98. data/public/cart.png +0 -0
  99. data/public/cart.xcf +0 -0
  100. data/public/metalpoles_molton_ball_l.jpg +0 -0
  101. data/public/old_background.png +0 -0
  102. data/public/pointer.png +0 -0
  103. data/public/pointer.xcf +0 -0
  104. data/public/pole.kra +0 -0
  105. data/public/pole.png +0 -0
  106. data/public/pole.xcf +0 -0
  107. data/public/wheel-of-year-stone-DD-131-WOYS.jpg +0 -0
  108. data/public/wheel.png +0 -0
  109. data/public/wheel.xcf +0 -0
  110. data/public/wood-planks-texture.jpg +0 -0
  111. data/rdoc/ControllerPoint.html +0 -116
  112. data/rdoc/CuteA.html +0 -177
  113. data/rdoc/CuteB.html +0 -178
  114. data/rdoc/DSLSetup.html +0 -177
  115. data/rdoc/GameTestWindow.html +0 -242
  116. data/rdoc/GameWindow.html +0 -292
  117. data/rdoc/Gemfile.html +0 -215
  118. data/rdoc/Gemfile_lock.html +0 -327
  119. data/rdoc/GraphTest.html +0 -210
  120. data/rdoc/Guardfile.html +0 -198
  121. data/rdoc/InvertedPendulum.html +0 -198
  122. data/rdoc/InvertedPendulum/Cart.html +0 -668
  123. data/rdoc/InvertedPendulum/DSL.html +0 -259
  124. data/rdoc/InvertedPendulum/InvPendWindow.html +0 -402
  125. data/rdoc/Logger.html +0 -98
  126. data/rdoc/NEAT.html +0 -422
  127. data/rdoc/NEAT/BasicNeuronTypes.html +0 -107
  128. data/rdoc/NEAT/BasicNeuronTypes/BiasNeuron.html +0 -265
  129. data/rdoc/NEAT/BasicNeuronTypes/CosineNeuron.html +0 -162
  130. data/rdoc/NEAT/BasicNeuronTypes/InputNeuron.html +0 -206
  131. data/rdoc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +0 -162
  132. data/rdoc/NEAT/BasicNeuronTypes/SineNeuron.html +0 -162
  133. data/rdoc/NEAT/BasicNeuronTypes/TanhNeuron.html +0 -161
  134. data/rdoc/NEAT/Controller.html +0 -729
  135. data/rdoc/NEAT/Controller/NeatSettings.html +0 -880
  136. data/rdoc/NEAT/Critter.html +0 -489
  137. data/rdoc/NEAT/Critter/Genotype.html +0 -735
  138. data/rdoc/NEAT/Critter/Genotype/Gene.html +0 -457
  139. data/rdoc/NEAT/Critter/Phenotype.html +0 -330
  140. data/rdoc/NEAT/DSL.html +0 -729
  141. data/rdoc/NEAT/Evaluator.html +0 -256
  142. data/rdoc/NEAT/Evolver.html +0 -891
  143. data/rdoc/NEAT/Evolver/CritterOp.html +0 -349
  144. data/rdoc/NEAT/Expressor.html +0 -402
  145. data/rdoc/NEAT/Graph.html +0 -263
  146. data/rdoc/NEAT/Graph/DependencyResolver.html +0 -291
  147. data/rdoc/NEAT/Graph/GraphException.html +0 -105
  148. data/rdoc/NEAT/NeatException.html +0 -105
  149. data/rdoc/NEAT/NeatOb.html +0 -325
  150. data/rdoc/NEAT/Neuron.html +0 -481
  151. data/rdoc/NEAT/Operator.html +0 -109
  152. data/rdoc/NEAT/Population.html +0 -935
  153. data/rdoc/NEAT/Trait.html +0 -117
  154. data/rdoc/Object.html +0 -384
  155. data/rdoc/Phi.html +0 -98
  156. data/rdoc/Player.html +0 -383
  157. data/rdoc/Rakefile.html +0 -254
  158. data/rdoc/RubyNEAT.html +0 -98
  159. data/rdoc/RubyNEAT/Application.html +0 -105
  160. data/rdoc/SDL.html +0 -98
  161. data/rdoc/SDL/Event2.html +0 -98
  162. data/rdoc/Vector.html +0 -195
  163. data/rdoc/created.rid +0 -125
  164. data/rdoc/doc/ControllerPoint_html.html +0 -299
  165. data/rdoc/doc/CuteA_html.html +0 -438
  166. data/rdoc/doc/CuteB_html.html +0 -436
  167. data/rdoc/doc/DSL_html.html +0 -992
  168. data/rdoc/doc/NEAT/BasicNeuronTypes/BiasNeuron_html.html +0 -617
  169. data/rdoc/doc/NEAT/BasicNeuronTypes/CosineNeuron_html.html +0 -413
  170. data/rdoc/doc/NEAT/BasicNeuronTypes/InputNeuron_html.html +0 -498
  171. data/rdoc/doc/NEAT/BasicNeuronTypes/SigmoidNeuron_html.html +0 -413
  172. data/rdoc/doc/NEAT/BasicNeuronTypes/SineNeuron_html.html +0 -413
  173. data/rdoc/doc/NEAT/BasicNeuronTypes/TanhNeuron_html.html +0 -412
  174. data/rdoc/doc/NEAT/BasicNeuronTypes_html.html +0 -310
  175. data/rdoc/doc/NEAT/Controller/NeatSettings_html.html +0 -3324
  176. data/rdoc/doc/NEAT/Controller_html.html +0 -2212
  177. data/rdoc/doc/NEAT/Critter/Genotype/Gene_html.html +0 -997
  178. data/rdoc/doc/NEAT/Critter/Genotype_html.html +0 -1556
  179. data/rdoc/doc/NEAT/Critter/Phenotype_html.html +0 -687
  180. data/rdoc/doc/NEAT/Critter_html.html +0 -1037
  181. data/rdoc/doc/NEAT/DSL_html.html +0 -1349
  182. data/rdoc/doc/NEAT/Evaluator_html.html +0 -556
  183. data/rdoc/doc/NEAT/Evolver/CritterOp_html.html +0 -690
  184. data/rdoc/doc/NEAT/Evolver_html.html +0 -677
  185. data/rdoc/doc/NEAT/Expressor_html.html +0 -468
  186. data/rdoc/doc/NEAT/Graph/DependencyResolver_html.html +0 -598
  187. data/rdoc/doc/NEAT/Graph/GraphException_html.html +0 -299
  188. data/rdoc/doc/NEAT/Graph_html.html +0 -527
  189. data/rdoc/doc/NEAT/NeatException_html.html +0 -299
  190. data/rdoc/doc/NEAT/NeatOb_html.html +0 -671
  191. data/rdoc/doc/NEAT/Neuron_html.html +0 -1095
  192. data/rdoc/doc/NEAT/Operator_html.html +0 -337
  193. data/rdoc/doc/NEAT/Population_html.html +0 -1795
  194. data/rdoc/doc/NEAT/Trait_html.html +0 -344
  195. data/rdoc/doc/NEAT_html.html +0 -736
  196. data/rdoc/doc/_index_html.html +0 -559
  197. data/rdoc/doc/class_list_html.html +0 -369
  198. data/rdoc/doc/css/common_css.html +0 -188
  199. data/rdoc/doc/css/full_list_css.html +0 -243
  200. data/rdoc/doc/css/style_css.html +0 -530
  201. data/rdoc/doc/file_list_html.html +0 -240
  202. data/rdoc/doc/frames_html.html +0 -217
  203. data/rdoc/doc/index_html.html +0 -559
  204. data/rdoc/doc/js/app_js.html +0 -423
  205. data/rdoc/doc/js/full_list_js.html +0 -372
  206. data/rdoc/doc/js/jquery_js.html +0 -1536
  207. data/rdoc/doc/method_list_html.html +0 -1375
  208. data/rdoc/doc/top-level-namespace_html.html +0 -317
  209. data/rdoc/fonts.css +0 -167
  210. data/rdoc/fonts/Lato-Light.ttf +0 -0
  211. data/rdoc/fonts/Lato-LightItalic.ttf +0 -0
  212. data/rdoc/fonts/Lato-Regular.ttf +0 -0
  213. data/rdoc/fonts/Lato-RegularItalic.ttf +0 -0
  214. data/rdoc/fonts/SourceCodePro-Bold.ttf +0 -0
  215. data/rdoc/fonts/SourceCodePro-Regular.ttf +0 -0
  216. data/rdoc/images/add.png +0 -0
  217. data/rdoc/images/arrow_up.png +0 -0
  218. data/rdoc/images/brick.png +0 -0
  219. data/rdoc/images/brick_link.png +0 -0
  220. data/rdoc/images/bug.png +0 -0
  221. data/rdoc/images/bullet_black.png +0 -0
  222. data/rdoc/images/bullet_toggle_minus.png +0 -0
  223. data/rdoc/images/bullet_toggle_plus.png +0 -0
  224. data/rdoc/images/date.png +0 -0
  225. data/rdoc/images/delete.png +0 -0
  226. data/rdoc/images/find.png +0 -0
  227. data/rdoc/images/loadingAnimation.gif +0 -0
  228. data/rdoc/images/macFFBgHack.png +0 -0
  229. data/rdoc/images/package.png +0 -0
  230. data/rdoc/images/page_green.png +0 -0
  231. data/rdoc/images/page_white_text.png +0 -0
  232. data/rdoc/images/page_white_width.png +0 -0
  233. data/rdoc/images/plugin.png +0 -0
  234. data/rdoc/images/ruby.png +0 -0
  235. data/rdoc/images/tag_blue.png +0 -0
  236. data/rdoc/images/tag_green.png +0 -0
  237. data/rdoc/images/transparent.png +0 -0
  238. data/rdoc/images/wrench.png +0 -0
  239. data/rdoc/images/wrench_orange.png +0 -0
  240. data/rdoc/images/zoom.png +0 -0
  241. data/rdoc/index.html +0 -282
  242. data/rdoc/js/darkfish.js +0 -140
  243. data/rdoc/js/jquery.js +0 -18
  244. data/rdoc/js/navigation.js +0 -142
  245. data/rdoc/js/search.js +0 -109
  246. data/rdoc/js/search_index.js +0 -1
  247. data/rdoc/js/searcher.js +0 -228
  248. data/rdoc/rdoc.css +0 -580
  249. data/rdoc/rubyneat_gemspec.html +0 -387
  250. data/rdoc/table_of_contents.html +0 -2502
  251. data/rdoc/xordebug_log.html +0 -170598
  252. data/rdoc/xorsin_log.html +0 -22569
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- <!DOCTYPE html>
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- <html>
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- <head>
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- <meta charset="UTF-8">
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- <title>Evolver.html - rubyneat 0.3.4</title>
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- <div id="table-of-contents-navigation">
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- <a href="../../table_of_contents.html#pages">Pages</a>
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- <a href="../../table_of_contents.html#methods">Methods</a>
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- <form action="#" method="get" accept-charset="utf-8">
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- <input id="search-field" role="combobox" aria-label="Search"
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- aria-autocomplete="list" aria-controls="search-results"
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- <p>&lt;h1 id=“label-Evolver+–+Basis+of+all+evolvers.”&gt;Evolver – Basis of
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- be used as is). Here, we&amp;#39;ll have many different evolutionary
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- operators that will perform operations on the various critters in the
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- &lt;a href=&quot;#evolve-instance_method&quot; title=&quot;#evolve (instance method)&quot;&gt;- (Object) &lt;strong&gt;evolve&lt;/strong&gt;(population) &lt;/a&gt;
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- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
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- fitness and novelty, etc.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
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- <p>&lt;/li&gt;</p>
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- &lt;a href=&quot;#initialize-instance_method&quot; title=&quot;#initialize (instance method)&quot;&gt;- (Evolver) &lt;strong&gt;initialize&lt;/strong&gt;(c) &lt;/a&gt;
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- <p>&lt;p&gt;A new instance of Evolver.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
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- &lt;p class=&quot;inherited&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#log-instance_method&quot; title=&quot;NEAT::NeatOb#log (method)&quot;&gt;#log&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#log-class_method&quot; title=&quot;NEAT::NeatOb.log (method)&quot;&gt;log&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#to_s-instance_method&quot; title=&quot;NEAT::NeatOb#to_s (method)&quot;&gt;#to_s&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;
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501
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- &lt;span class=&#39;comment&#39;&gt;# Population sorting and evaluation for breeding, mutations, etc.</pre>
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-
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- <p>&lt;/span&gt; &lt;span class=&#39;id identifier
532
- rubyid_prepare_speciation!&#39;&gt;prepare_speciation!&lt;/span&gt;</p>
533
-
534
- <pre>&lt;span class=&#39;id identifier rubyid_prepare_fitness!&#39;&gt;prepare_fitness!&lt;/span&gt;
535
- &lt;span class=&#39;id identifier rubyid_prepare_novelty!&#39;&gt;prepare_novelty!&lt;/span&gt;
536
-
537
- &lt;span class=&#39;id identifier rubyid_mate!&#39;&gt;mate!&lt;/span&gt;
538
-
539
- &lt;span class=&#39;kw&#39;&gt;return&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@npop&lt;/span&gt;</pre>
540
-
541
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
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-
543
- <pre> &lt;/td&gt;
544
- &lt;/tr&gt;</pre>
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-
546
- <p>&lt;/table&gt; &lt;/div&gt;</p>
547
-
548
- <pre> &lt;div class=&quot;method_details &quot;&gt;
549
- &lt;h3 class=&quot;signature &quot; id=&quot;gen_initial_genes!-instance_method&quot;&gt;
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-
551
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;gen_initial_genes!&lt;/strong&gt;(genotype)</pre>
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-
553
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
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-
555
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
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-
557
- <p>&lt;p&gt;Generate the initial genes for a given genotype. We key genes off
558
- their innovation numbers.&lt;/p&gt;</p>
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-
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- <pre>&lt;/div&gt;</pre>
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-
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- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
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-
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- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
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-
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- <pre>&lt;tr&gt;
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- &lt;td&gt;
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- &lt;pre class=&quot;lines&quot;&gt;</pre>
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-
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- <p>20 21 22 23 24 25 26 27 28&lt;/pre&gt;</p>
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-
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- <pre>&lt;/td&gt;
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- &lt;td&gt;
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- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/evolver.rb&#39;, line 20&lt;/span&gt;</pre>
575
-
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- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
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- identifier
578
- rubyid_gen_initial_genes!&#39;&gt;gen_initial_genes!&lt;/span&gt;&lt;span
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- class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;id identifier
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- rubyid_genotype&#39;&gt;genotype&lt;/span&gt;&lt;span
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- class=&#39;rparen&#39;&gt;)&lt;/span&gt;</p>
582
-
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- <pre>&lt;span class=&#39;id identifier rubyid_genotype&#39;&gt;genotype&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_genes&#39;&gt;genes&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;lbrace&#39;&gt;{&lt;/span&gt;&lt;span class=&#39;rbrace&#39;&gt;}&lt;/span&gt;
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- &lt;span class=&#39;id identifier rubyid_genotype&#39;&gt;genotype&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_neural_inputs&#39;&gt;neural_inputs&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_each&#39;&gt;each&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;do&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_s1&#39;&gt;s1&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_input&#39;&gt;input&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;
585
- &lt;span class=&#39;id identifier rubyid_genotype&#39;&gt;genotype&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_neural_outputs&#39;&gt;neural_outputs&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_each&#39;&gt;each&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;do&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_s2&#39;&gt;s2&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_output&#39;&gt;output&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;
586
- &lt;span class=&#39;id identifier rubyid_g&#39;&gt;g&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;Critter&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;const&#39;&gt;Genotype&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;const&#39;&gt;Gene&lt;/span&gt;&lt;span class=&#39;lbracket&#39;&gt;[&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_genotype&#39;&gt;genotype&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_input&#39;&gt;input&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_output&#39;&gt;output&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;NEAT&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_controller&#39;&gt;controller&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_gaussian&#39;&gt;gaussian&lt;/span&gt;&lt;span class=&#39;rbracket&#39;&gt;]&lt;/span&gt;
587
- &lt;span class=&#39;id identifier rubyid_genotype&#39;&gt;genotype&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_genes&#39;&gt;genes&lt;/span&gt;&lt;span class=&#39;lbracket&#39;&gt;[&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_g&#39;&gt;g&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_innovation&#39;&gt;innovation&lt;/span&gt;&lt;span class=&#39;rbracket&#39;&gt;]&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_g&#39;&gt;g&lt;/span&gt;
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- &lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;
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- &lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;</pre>
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-
591
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
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-
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- <pre> &lt;/td&gt;
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- &lt;/tr&gt;</pre>
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-
596
- <p>&lt;/table&gt; &lt;/div&gt;</p>
597
-
598
- <pre> &lt;div class=&quot;method_details &quot;&gt;
599
- &lt;h3 class=&quot;signature &quot; id=&quot;mutate!-instance_method&quot;&gt;
600
-
601
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;mutate!&lt;/strong&gt;(population)</pre>
602
-
603
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
604
-
605
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
606
-
607
- <p>&lt;p&gt;Here we mutate the population.&lt;/p&gt;</p>
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-
609
- <pre>&lt;/div&gt;</pre>
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-
611
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
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-
613
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
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-
615
- <pre>&lt;tr&gt;
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- &lt;td&gt;
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- &lt;pre class=&quot;lines&quot;&gt;</pre>
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-
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- <p>31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47&lt;/pre&gt;</p>
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-
621
- <pre>&lt;/td&gt;
622
- &lt;td&gt;
623
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/evolver.rb&#39;, line 31&lt;/span&gt;</pre>
624
-
625
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
626
- identifier rubyid_mutate!&#39;&gt;mutate!&lt;/span&gt;&lt;span
627
- class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;id identifier
628
- rubyid_population&#39;&gt;population&lt;/span&gt;&lt;span
629
- class=&#39;rparen&#39;&gt;)&lt;/span&gt;</p>
630
-
631
- <pre>&lt;span class=&#39;ivar&#39;&gt;@npop&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_population&#39;&gt;population&lt;/span&gt;
632
-
633
- &lt;span class=&#39;kw&#39;&gt;if&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@controller&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_parms&#39;&gt;parms&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_mate_only_prob&#39;&gt;mate_only_prob&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_nil?&#39;&gt;nil?&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;or&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_rand&#39;&gt;rand&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;&amp;gt;&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@controller&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_parms&#39;&gt;parms&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_mate_only_prob&#39;&gt;mate_only_prob&lt;/span&gt;
634
- &lt;span class=&#39;id identifier rubyid_log&#39;&gt;log&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_debug&#39;&gt;debug&lt;/span&gt; &lt;span class=&#39;tstring&#39;&gt;&lt;span class=&#39;tstring_beg&#39;&gt;&amp;quot;&lt;/span&gt;&lt;span class=&#39;tstring_content&#39;&gt;[[[ Neuron and Gene Giggling!&lt;/span&gt;&lt;span class=&#39;tstring_end&#39;&gt;&amp;quot;&lt;/span&gt;&lt;/span&gt;
635
- &lt;span class=&#39;id identifier rubyid_mutate_perturb_gene_weights!&#39;&gt;mutate_perturb_gene_weights!&lt;/span&gt;
636
- &lt;span class=&#39;id identifier rubyid_mutate_change_gene_weights!&#39;&gt;mutate_change_gene_weights!&lt;/span&gt;
637
- &lt;span class=&#39;id identifier rubyid_mutate_add_neurons!&#39;&gt;mutate_add_neurons!&lt;/span&gt;
638
- &lt;span class=&#39;id identifier rubyid_mutate_change_neurons!&#39;&gt;mutate_change_neurons!&lt;/span&gt;
639
- &lt;span class=&#39;id identifier rubyid_mutate_add_genes!&#39;&gt;mutate_add_genes!&lt;/span&gt;
640
- &lt;span class=&#39;id identifier rubyid_mutate_disable_genes!&#39;&gt;mutate_disable_genes!&lt;/span&gt;
641
- &lt;span class=&#39;id identifier rubyid_mutate_reenable_genes!&#39;&gt;mutate_reenable_genes!&lt;/span&gt;
642
- &lt;span class=&#39;id identifier rubyid_log&#39;&gt;log&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_debug&#39;&gt;debug&lt;/span&gt; &lt;span class=&#39;tstring&#39;&gt;&lt;span class=&#39;tstring_beg&#39;&gt;&amp;quot;&lt;/span&gt;&lt;span class=&#39;tstring_content&#39;&gt;]]] End Neuron and Gene Giggling!\n&lt;/span&gt;&lt;span class=&#39;tstring_end&#39;&gt;&amp;quot;&lt;/span&gt;&lt;/span&gt;
643
- &lt;span class=&#39;kw&#39;&gt;else&lt;/span&gt;
644
- &lt;span class=&#39;id identifier rubyid_log&#39;&gt;log&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_debug&#39;&gt;debug&lt;/span&gt; &lt;span class=&#39;tstring&#39;&gt;&lt;span class=&#39;tstring_beg&#39;&gt;&amp;quot;&lt;/span&gt;&lt;span class=&#39;tstring_content&#39;&gt;*** Mating only!&lt;/span&gt;&lt;span class=&#39;tstring_end&#39;&gt;&amp;quot;&lt;/span&gt;&lt;/span&gt;
645
- &lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;</pre>
646
-
647
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
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-
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- <pre> &lt;/td&gt;
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- &lt;/tr&gt;</pre>
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- <p>&lt;/table&gt; &lt;/div&gt;</p>
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- <pre>&lt;/div&gt;</pre>
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- <pre> &lt;div id=&quot;footer&quot;&gt;
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