rubyneat 0.3.5.alpha.3 → 0.3.5.alpha.5

Sign up to get free protection for your applications and to get access to all the features.
Files changed (252) hide show
  1. checksums.yaml +4 -4
  2. data/.semver +1 -1
  3. data/Gemfile +19 -19
  4. data/Gemfile.lock +39 -33
  5. data/README.md +66 -0
  6. data/Rakefile +19 -2
  7. data/bin/neat +4 -60
  8. data/lib/rubyneat/cli.rb +5 -0
  9. data/lib/rubyneat/cli/generate.rb +131 -0
  10. data/lib/rubyneat/cli/main.rb +54 -0
  11. data/lib/rubyneat/cli/templates/generate/Gemfile.tt +17 -0
  12. data/lib/rubyneat/cli/templates/generate/README.md.tt +1 -0
  13. data/lib/rubyneat/cli/templates/generate/bin/neat.tt +14 -0
  14. data/{neater/xor_neat.rb → lib/rubyneat/cli/templates/generate/neater.tt} +7 -22
  15. data/rubyneat.gemspec +73 -297
  16. data/rubyneat.gemspec.orig +384 -0
  17. metadata +76 -292
  18. data/.idea/.name +0 -1
  19. data/.idea/.rakeTasks +0 -7
  20. data/.idea/dictionaries/trader.xml +0 -3
  21. data/.idea/encodings.xml +0 -5
  22. data/.idea/misc.xml +0 -5
  23. data/.idea/modules.xml +0 -9
  24. data/.idea/rubyneat.iml +0 -198
  25. data/.idea/runConfigurations/invpend_neat.xml +0 -26
  26. data/.idea/runConfigurations/sigdebug_neat.xml +0 -24
  27. data/.idea/runConfigurations/xor_neat.xml +0 -26
  28. data/.idea/runConfigurations/xordebug_neat.xml +0 -24
  29. data/.idea/runConfigurations/xorsin_neat.xml +0 -24
  30. data/.idea/scopes/scope_settings.xml +0 -5
  31. data/.idea/vcs.xml +0 -7
  32. data/.idea/workspace.xml +0 -1151
  33. data/.yardoc/checksums +0 -11
  34. data/.yardoc/object_types +0 -0
  35. data/.yardoc/objects/root.dat +0 -0
  36. data/.yardoc/proxy_types +0 -0
  37. data/Guardfile +0 -8
  38. data/doc/ControllerPoint.html +0 -125
  39. data/doc/CuteA.html +0 -286
  40. data/doc/CuteB.html +0 -297
  41. data/doc/DSL.html +0 -883
  42. data/doc/NEAT.html +0 -588
  43. data/doc/NEAT/BasicNeuronTypes.html +0 -136
  44. data/doc/NEAT/BasicNeuronTypes/BiasNeuron.html +0 -518
  45. data/doc/NEAT/BasicNeuronTypes/CosineNeuron.html +0 -274
  46. data/doc/NEAT/BasicNeuronTypes/InputNeuron.html +0 -366
  47. data/doc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +0 -275
  48. data/doc/NEAT/BasicNeuronTypes/SineNeuron.html +0 -274
  49. data/doc/NEAT/BasicNeuronTypes/TanhNeuron.html +0 -274
  50. data/doc/NEAT/Controller.html +0 -2490
  51. data/doc/NEAT/Controller/NeatSettings.html +0 -3985
  52. data/doc/NEAT/Critter.html +0 -1037
  53. data/doc/NEAT/Critter/Genotype.html +0 -1601
  54. data/doc/NEAT/Critter/Genotype/Gene.html +0 -979
  55. data/doc/NEAT/Critter/Phenotype.html +0 -603
  56. data/doc/NEAT/DSL.html +0 -1255
  57. data/doc/NEAT/Evaluator.html +0 -420
  58. data/doc/NEAT/Evolver.html +0 -602
  59. data/doc/NEAT/Evolver/CritterOp.html +0 -551
  60. data/doc/NEAT/Expressor.html +0 -327
  61. data/doc/NEAT/Graph.html +0 -402
  62. data/doc/NEAT/Graph/DependencyResolver.html +0 -478
  63. data/doc/NEAT/Graph/GraphException.html +0 -123
  64. data/doc/NEAT/NeatException.html +0 -123
  65. data/doc/NEAT/NeatOb.html +0 -567
  66. data/doc/NEAT/Neuron.html +0 -1067
  67. data/doc/NEAT/Operator.html +0 -162
  68. data/doc/NEAT/Population.html +0 -1961
  69. data/doc/NEAT/Trait.html +0 -169
  70. data/doc/_index.html +0 -373
  71. data/doc/class_list.html +0 -54
  72. data/doc/css/common.css +0 -1
  73. data/doc/css/full_list.css +0 -57
  74. data/doc/css/style.css +0 -339
  75. data/doc/file_list.html +0 -53
  76. data/doc/frames.html +0 -26
  77. data/doc/index.html +0 -373
  78. data/doc/js/app.js +0 -219
  79. data/doc/js/full_list.js +0 -178
  80. data/doc/js/jquery.js +0 -4
  81. data/doc/method_list.html +0 -1415
  82. data/doc/top-level-namespace.html +0 -164
  83. data/foo/foo_aquarium_example.rb +0 -38
  84. data/foo/foo_gosu.rb +0 -99
  85. data/foo/foo_rubygoo.rb +0 -104
  86. data/foo/foo_sdl.rb +0 -34
  87. data/foo/icon.png +0 -0
  88. data/neater/invpend_neat.rb +0 -150
  89. data/neater/rnlib/inverted_pendulum.rb +0 -380
  90. data/neater/rnlib/xor.rb +0 -10
  91. data/neater/sigdebug_neat.rb +0 -136
  92. data/neater/xoranalog_neat.rb +0 -138
  93. data/neater/xorsin_neat.rb +0 -143
  94. data/projectFilesBackup/.idea/rubyneat.iml +0 -180
  95. data/public/.directory +0 -4
  96. data/public/background.png +0 -0
  97. data/public/background.xcf +0 -0
  98. data/public/cart.png +0 -0
  99. data/public/cart.xcf +0 -0
  100. data/public/metalpoles_molton_ball_l.jpg +0 -0
  101. data/public/old_background.png +0 -0
  102. data/public/pointer.png +0 -0
  103. data/public/pointer.xcf +0 -0
  104. data/public/pole.kra +0 -0
  105. data/public/pole.png +0 -0
  106. data/public/pole.xcf +0 -0
  107. data/public/wheel-of-year-stone-DD-131-WOYS.jpg +0 -0
  108. data/public/wheel.png +0 -0
  109. data/public/wheel.xcf +0 -0
  110. data/public/wood-planks-texture.jpg +0 -0
  111. data/rdoc/ControllerPoint.html +0 -116
  112. data/rdoc/CuteA.html +0 -177
  113. data/rdoc/CuteB.html +0 -178
  114. data/rdoc/DSLSetup.html +0 -177
  115. data/rdoc/GameTestWindow.html +0 -242
  116. data/rdoc/GameWindow.html +0 -292
  117. data/rdoc/Gemfile.html +0 -215
  118. data/rdoc/Gemfile_lock.html +0 -327
  119. data/rdoc/GraphTest.html +0 -210
  120. data/rdoc/Guardfile.html +0 -198
  121. data/rdoc/InvertedPendulum.html +0 -198
  122. data/rdoc/InvertedPendulum/Cart.html +0 -668
  123. data/rdoc/InvertedPendulum/DSL.html +0 -259
  124. data/rdoc/InvertedPendulum/InvPendWindow.html +0 -402
  125. data/rdoc/Logger.html +0 -98
  126. data/rdoc/NEAT.html +0 -422
  127. data/rdoc/NEAT/BasicNeuronTypes.html +0 -107
  128. data/rdoc/NEAT/BasicNeuronTypes/BiasNeuron.html +0 -265
  129. data/rdoc/NEAT/BasicNeuronTypes/CosineNeuron.html +0 -162
  130. data/rdoc/NEAT/BasicNeuronTypes/InputNeuron.html +0 -206
  131. data/rdoc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +0 -162
  132. data/rdoc/NEAT/BasicNeuronTypes/SineNeuron.html +0 -162
  133. data/rdoc/NEAT/BasicNeuronTypes/TanhNeuron.html +0 -161
  134. data/rdoc/NEAT/Controller.html +0 -729
  135. data/rdoc/NEAT/Controller/NeatSettings.html +0 -880
  136. data/rdoc/NEAT/Critter.html +0 -489
  137. data/rdoc/NEAT/Critter/Genotype.html +0 -735
  138. data/rdoc/NEAT/Critter/Genotype/Gene.html +0 -457
  139. data/rdoc/NEAT/Critter/Phenotype.html +0 -330
  140. data/rdoc/NEAT/DSL.html +0 -729
  141. data/rdoc/NEAT/Evaluator.html +0 -256
  142. data/rdoc/NEAT/Evolver.html +0 -891
  143. data/rdoc/NEAT/Evolver/CritterOp.html +0 -349
  144. data/rdoc/NEAT/Expressor.html +0 -402
  145. data/rdoc/NEAT/Graph.html +0 -263
  146. data/rdoc/NEAT/Graph/DependencyResolver.html +0 -291
  147. data/rdoc/NEAT/Graph/GraphException.html +0 -105
  148. data/rdoc/NEAT/NeatException.html +0 -105
  149. data/rdoc/NEAT/NeatOb.html +0 -325
  150. data/rdoc/NEAT/Neuron.html +0 -481
  151. data/rdoc/NEAT/Operator.html +0 -109
  152. data/rdoc/NEAT/Population.html +0 -935
  153. data/rdoc/NEAT/Trait.html +0 -117
  154. data/rdoc/Object.html +0 -384
  155. data/rdoc/Phi.html +0 -98
  156. data/rdoc/Player.html +0 -383
  157. data/rdoc/Rakefile.html +0 -254
  158. data/rdoc/RubyNEAT.html +0 -98
  159. data/rdoc/RubyNEAT/Application.html +0 -105
  160. data/rdoc/SDL.html +0 -98
  161. data/rdoc/SDL/Event2.html +0 -98
  162. data/rdoc/Vector.html +0 -195
  163. data/rdoc/created.rid +0 -125
  164. data/rdoc/doc/ControllerPoint_html.html +0 -299
  165. data/rdoc/doc/CuteA_html.html +0 -438
  166. data/rdoc/doc/CuteB_html.html +0 -436
  167. data/rdoc/doc/DSL_html.html +0 -992
  168. data/rdoc/doc/NEAT/BasicNeuronTypes/BiasNeuron_html.html +0 -617
  169. data/rdoc/doc/NEAT/BasicNeuronTypes/CosineNeuron_html.html +0 -413
  170. data/rdoc/doc/NEAT/BasicNeuronTypes/InputNeuron_html.html +0 -498
  171. data/rdoc/doc/NEAT/BasicNeuronTypes/SigmoidNeuron_html.html +0 -413
  172. data/rdoc/doc/NEAT/BasicNeuronTypes/SineNeuron_html.html +0 -413
  173. data/rdoc/doc/NEAT/BasicNeuronTypes/TanhNeuron_html.html +0 -412
  174. data/rdoc/doc/NEAT/BasicNeuronTypes_html.html +0 -310
  175. data/rdoc/doc/NEAT/Controller/NeatSettings_html.html +0 -3324
  176. data/rdoc/doc/NEAT/Controller_html.html +0 -2212
  177. data/rdoc/doc/NEAT/Critter/Genotype/Gene_html.html +0 -997
  178. data/rdoc/doc/NEAT/Critter/Genotype_html.html +0 -1556
  179. data/rdoc/doc/NEAT/Critter/Phenotype_html.html +0 -687
  180. data/rdoc/doc/NEAT/Critter_html.html +0 -1037
  181. data/rdoc/doc/NEAT/DSL_html.html +0 -1349
  182. data/rdoc/doc/NEAT/Evaluator_html.html +0 -556
  183. data/rdoc/doc/NEAT/Evolver/CritterOp_html.html +0 -690
  184. data/rdoc/doc/NEAT/Evolver_html.html +0 -677
  185. data/rdoc/doc/NEAT/Expressor_html.html +0 -468
  186. data/rdoc/doc/NEAT/Graph/DependencyResolver_html.html +0 -598
  187. data/rdoc/doc/NEAT/Graph/GraphException_html.html +0 -299
  188. data/rdoc/doc/NEAT/Graph_html.html +0 -527
  189. data/rdoc/doc/NEAT/NeatException_html.html +0 -299
  190. data/rdoc/doc/NEAT/NeatOb_html.html +0 -671
  191. data/rdoc/doc/NEAT/Neuron_html.html +0 -1095
  192. data/rdoc/doc/NEAT/Operator_html.html +0 -337
  193. data/rdoc/doc/NEAT/Population_html.html +0 -1795
  194. data/rdoc/doc/NEAT/Trait_html.html +0 -344
  195. data/rdoc/doc/NEAT_html.html +0 -736
  196. data/rdoc/doc/_index_html.html +0 -559
  197. data/rdoc/doc/class_list_html.html +0 -369
  198. data/rdoc/doc/css/common_css.html +0 -188
  199. data/rdoc/doc/css/full_list_css.html +0 -243
  200. data/rdoc/doc/css/style_css.html +0 -530
  201. data/rdoc/doc/file_list_html.html +0 -240
  202. data/rdoc/doc/frames_html.html +0 -217
  203. data/rdoc/doc/index_html.html +0 -559
  204. data/rdoc/doc/js/app_js.html +0 -423
  205. data/rdoc/doc/js/full_list_js.html +0 -372
  206. data/rdoc/doc/js/jquery_js.html +0 -1536
  207. data/rdoc/doc/method_list_html.html +0 -1375
  208. data/rdoc/doc/top-level-namespace_html.html +0 -317
  209. data/rdoc/fonts.css +0 -167
  210. data/rdoc/fonts/Lato-Light.ttf +0 -0
  211. data/rdoc/fonts/Lato-LightItalic.ttf +0 -0
  212. data/rdoc/fonts/Lato-Regular.ttf +0 -0
  213. data/rdoc/fonts/Lato-RegularItalic.ttf +0 -0
  214. data/rdoc/fonts/SourceCodePro-Bold.ttf +0 -0
  215. data/rdoc/fonts/SourceCodePro-Regular.ttf +0 -0
  216. data/rdoc/images/add.png +0 -0
  217. data/rdoc/images/arrow_up.png +0 -0
  218. data/rdoc/images/brick.png +0 -0
  219. data/rdoc/images/brick_link.png +0 -0
  220. data/rdoc/images/bug.png +0 -0
  221. data/rdoc/images/bullet_black.png +0 -0
  222. data/rdoc/images/bullet_toggle_minus.png +0 -0
  223. data/rdoc/images/bullet_toggle_plus.png +0 -0
  224. data/rdoc/images/date.png +0 -0
  225. data/rdoc/images/delete.png +0 -0
  226. data/rdoc/images/find.png +0 -0
  227. data/rdoc/images/loadingAnimation.gif +0 -0
  228. data/rdoc/images/macFFBgHack.png +0 -0
  229. data/rdoc/images/package.png +0 -0
  230. data/rdoc/images/page_green.png +0 -0
  231. data/rdoc/images/page_white_text.png +0 -0
  232. data/rdoc/images/page_white_width.png +0 -0
  233. data/rdoc/images/plugin.png +0 -0
  234. data/rdoc/images/ruby.png +0 -0
  235. data/rdoc/images/tag_blue.png +0 -0
  236. data/rdoc/images/tag_green.png +0 -0
  237. data/rdoc/images/transparent.png +0 -0
  238. data/rdoc/images/wrench.png +0 -0
  239. data/rdoc/images/wrench_orange.png +0 -0
  240. data/rdoc/images/zoom.png +0 -0
  241. data/rdoc/index.html +0 -282
  242. data/rdoc/js/darkfish.js +0 -140
  243. data/rdoc/js/jquery.js +0 -18
  244. data/rdoc/js/navigation.js +0 -142
  245. data/rdoc/js/search.js +0 -109
  246. data/rdoc/js/search_index.js +0 -1
  247. data/rdoc/js/searcher.js +0 -228
  248. data/rdoc/rdoc.css +0 -580
  249. data/rdoc/rubyneat_gemspec.html +0 -387
  250. data/rdoc/table_of_contents.html +0 -2502
  251. data/rdoc/xordebug_log.html +0 -170598
  252. data/rdoc/xorsin_log.html +0 -22569
@@ -1,2212 +0,0 @@
1
- <!DOCTYPE html>
2
-
3
- <html>
4
- <head>
5
- <meta charset="UTF-8">
6
-
7
- <title>Controller.html - rubyneat 0.3.4</title>
8
-
9
- <link href="../../fonts.css" rel="stylesheet">
10
- <link href="../../rdoc.css" rel="stylesheet">
11
-
12
- <script type="text/javascript">
13
- var rdoc_rel_prefix = "../../";
14
- </script>
15
-
16
- <script src="../../js/jquery.js"></script>
17
- <script src="../../js/navigation.js"></script>
18
- <script src="../../js/search_index.js"></script>
19
- <script src="../../js/search.js"></script>
20
- <script src="../../js/searcher.js"></script>
21
- <script src="../../js/darkfish.js"></script>
22
-
23
-
24
- <body id="top" role="document" class="file">
25
- <nav role="navigation">
26
- <div id="project-navigation">
27
- <div id="home-section" role="region" title="Quick navigation" class="nav-section">
28
- <h2>
29
- <a href="../../index.html" rel="home">Home</a>
30
- </h2>
31
-
32
- <div id="table-of-contents-navigation">
33
- <a href="../../table_of_contents.html#pages">Pages</a>
34
- <a href="../../table_of_contents.html#classes">Classes</a>
35
- <a href="../../table_of_contents.html#methods">Methods</a>
36
- </div>
37
- </div>
38
-
39
- <div id="search-section" role="search" class="project-section initially-hidden">
40
- <form action="#" method="get" accept-charset="utf-8">
41
- <div id="search-field-wrapper">
42
- <input id="search-field" role="combobox" aria-label="Search"
43
- aria-autocomplete="list" aria-controls="search-results"
44
- type="text" name="search" placeholder="Search" spellcheck="false"
45
- title="Type to search, Up and Down to navigate, Enter to load">
46
- </div>
47
-
48
- <ul id="search-results" aria-label="Search Results"
49
- aria-busy="false" aria-expanded="false"
50
- aria-atomic="false" class="initially-hidden"></ul>
51
- </form>
52
- </div>
53
-
54
- </div>
55
-
56
-
57
-
58
- <div id="project-metadata">
59
- <div id="fileindex-section" class="nav-section">
60
- <h3>Pages</h3>
61
-
62
- <ul class="link-list">
63
-
64
- <li><a href="../../Gemfile.html">Gemfile</a>
65
-
66
- <li><a href="../../Gemfile_lock.html">Gemfile.lock</a>
67
-
68
- <li><a href="../../Guardfile.html">Guardfile</a>
69
-
70
- <li><a href="../../Rakefile.html">Rakefile</a>
71
-
72
- <li><a href="../../doc/ControllerPoint_html.html">ControllerPoint.html</a>
73
-
74
- <li><a href="../../doc/CuteA_html.html">CuteA.html</a>
75
-
76
- <li><a href="../../doc/CuteB_html.html">CuteB.html</a>
77
-
78
- <li><a href="../../doc/DSL_html.html">DSL.html</a>
79
-
80
- <li><a href="../../doc/NEAT_html.html">NEAT.html</a>
81
-
82
- <li><a href="../../doc/NEAT/BasicNeuronTypes_html.html">BasicNeuronTypes.html</a>
83
-
84
- <li><a href="../../doc/NEAT/BasicNeuronTypes/BiasNeuron_html.html">BiasNeuron.html</a>
85
-
86
- <li><a href="../../doc/NEAT/BasicNeuronTypes/CosineNeuron_html.html">CosineNeuron.html</a>
87
-
88
- <li><a href="../../doc/NEAT/BasicNeuronTypes/InputNeuron_html.html">InputNeuron.html</a>
89
-
90
- <li><a href="../../doc/NEAT/BasicNeuronTypes/SigmoidNeuron_html.html">SigmoidNeuron.html</a>
91
-
92
- <li><a href="../../doc/NEAT/BasicNeuronTypes/SineNeuron_html.html">SineNeuron.html</a>
93
-
94
- <li><a href="../../doc/NEAT/BasicNeuronTypes/TanhNeuron_html.html">TanhNeuron.html</a>
95
-
96
- <li><a href="../../doc/NEAT/Controller_html.html">Controller.html</a>
97
-
98
- <li><a href="../../doc/NEAT/Controller/NeatSettings_html.html">NeatSettings.html</a>
99
-
100
- <li><a href="../../doc/NEAT/Critter_html.html">Critter.html</a>
101
-
102
- <li><a href="../../doc/NEAT/Critter/Genotype_html.html">Genotype.html</a>
103
-
104
- <li><a href="../../doc/NEAT/Critter/Genotype/Gene_html.html">Gene.html</a>
105
-
106
- <li><a href="../../doc/NEAT/Critter/Phenotype_html.html">Phenotype.html</a>
107
-
108
- <li><a href="../../doc/NEAT/DSL_html.html">DSL.html</a>
109
-
110
- <li><a href="../../doc/NEAT/Evaluator_html.html">Evaluator.html</a>
111
-
112
- <li><a href="../../doc/NEAT/Evolver_html.html">Evolver.html</a>
113
-
114
- <li><a href="../../doc/NEAT/Evolver/CritterOp_html.html">CritterOp.html</a>
115
-
116
- <li><a href="../../doc/NEAT/Expressor_html.html">Expressor.html</a>
117
-
118
- <li><a href="../../doc/NEAT/Graph_html.html">Graph.html</a>
119
-
120
- <li><a href="../../doc/NEAT/Graph/DependencyResolver_html.html">DependencyResolver.html</a>
121
-
122
- <li><a href="../../doc/NEAT/Graph/GraphException_html.html">GraphException.html</a>
123
-
124
- <li><a href="../../doc/NEAT/NeatException_html.html">NeatException.html</a>
125
-
126
- <li><a href="../../doc/NEAT/NeatOb_html.html">NeatOb.html</a>
127
-
128
- <li><a href="../../doc/NEAT/Neuron_html.html">Neuron.html</a>
129
-
130
- <li><a href="../../doc/NEAT/Operator_html.html">Operator.html</a>
131
-
132
- <li><a href="../../doc/NEAT/Population_html.html">Population.html</a>
133
-
134
- <li><a href="../../doc/NEAT/Trait_html.html">Trait.html</a>
135
-
136
- <li><a href="../../doc/_index_html.html">_index.html</a>
137
-
138
- <li><a href="../../doc/class_list_html.html">class_list.html</a>
139
-
140
- <li><a href="../../doc/css/common_css.html">common.css</a>
141
-
142
- <li><a href="../../doc/css/full_list_css.html">full_list.css</a>
143
-
144
- <li><a href="../../doc/css/style_css.html">style.css</a>
145
-
146
- <li><a href="../../doc/file_list_html.html">file_list.html</a>
147
-
148
- <li><a href="../../doc/frames_html.html">frames.html</a>
149
-
150
- <li><a href="../../doc/index_html.html">index.html</a>
151
-
152
- <li><a href="../../doc/js/app_js.html">app.js</a>
153
-
154
- <li><a href="../../doc/js/full_list_js.html">full_list.js</a>
155
-
156
- <li><a href="../../doc/js/jquery_js.html">jquery.js</a>
157
-
158
- <li><a href="../../doc/method_list_html.html">method_list.html</a>
159
-
160
- <li><a href="../../doc/top-level-namespace_html.html">top-level-namespace.html</a>
161
-
162
- <li><a href="../../foo_dump_log.html">foo.dump.log</a>
163
-
164
- <li><a href="../../rubyneat_gemspec.html">rubyneat.gemspec</a>
165
-
166
- <li><a href="../../xordebug_log.html">xordebug.log</a>
167
-
168
- <li><a href="../../xorsin_log.html">xorsin.log</a>
169
-
170
- </ul>
171
- </div>
172
-
173
- </div>
174
- </nav>
175
-
176
- <main role="main" aria-label="Page doc/NEAT/Controller.html">
177
-
178
- <p>&lt;!DOCTYPE html PUBLIC “-//W3C//DTD XHTML 1.0 Transitional//EN”</p>
179
-
180
- <pre>&quot;http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd&quot;&gt;</pre>
181
-
182
- <p>&lt;html xmlns=“<a
183
- href="http://www.w3.org/1999/xhtml">www.w3.org/1999/xhtml</a>”
184
- xml:lang=“en” lang=“en”&gt;</p>
185
-
186
- <pre>&lt;head&gt;
187
- &lt;meta http-equiv=&quot;Content-Type&quot; content=&quot;text/html; charset=utf-8&quot; /&gt;</pre>
188
-
189
- <p>&lt;title&gt;</p>
190
-
191
- <pre>Class: NEAT::Controller
192
-
193
- &amp;mdash; Documentation by YARD 0.8.7.3</pre>
194
-
195
- <p>&lt;/title&gt;</p>
196
-
197
- <pre>&lt;link rel=&quot;stylesheet&quot; href=&quot;../css/style.css&quot; type=&quot;text/css&quot; charset=&quot;utf-8&quot; /&gt;
198
-
199
- &lt;link rel=&quot;stylesheet&quot; href=&quot;../css/common.css&quot; type=&quot;text/css&quot; charset=&quot;utf-8&quot; /&gt;</pre>
200
-
201
- <p>&lt;script type=“text/javascript” charset=“utf-8”&gt;</p>
202
-
203
- <pre>hasFrames = window.top.frames.main ? true : false;
204
- relpath = &#39;../&#39;;
205
- framesUrl = &quot;../frames.html#!&quot; + escape(window.location.href);</pre>
206
-
207
- <p>&lt;/script&gt;</p>
208
-
209
- <pre>&lt;script type=&quot;text/javascript&quot; charset=&quot;utf-8&quot; src=&quot;../js/jquery.js&quot;&gt;&lt;/script&gt;
210
-
211
- &lt;script type=&quot;text/javascript&quot; charset=&quot;utf-8&quot; src=&quot;../js/app.js&quot;&gt;&lt;/script&gt;
212
-
213
- &lt;/head&gt;
214
- &lt;body&gt;
215
- &lt;div id=&quot;header&quot;&gt;
216
- &lt;div id=&quot;menu&quot;&gt;
217
-
218
- &lt;a href=&quot;../_index.html&quot;&gt;Index (C)&lt;/a&gt; &amp;raquo;
219
- &lt;span class=&#39;title&#39;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;../NEAT.html&quot; title=&quot;NEAT (module)&quot;&gt;NEAT&lt;/a&gt;&lt;/span&gt;&lt;/span&gt;
220
- &amp;raquo;
221
- &lt;span class=&quot;title&quot;&gt;Controller&lt;/span&gt;
222
-
223
- &lt;div class=&quot;noframes&quot;&gt;&lt;span class=&quot;title&quot;&gt;(&lt;/span&gt;&lt;a href=&quot;.&quot; target=&quot;_top&quot;&gt;no frames&lt;/a&gt;&lt;span class=&quot;title&quot;&gt;)&lt;/span&gt;&lt;/div&gt;</pre>
224
-
225
- <p>&lt;/div&gt;</p>
226
-
227
- <pre> &lt;div id=&quot;search&quot;&gt;
228
-
229
- &lt;a class=&quot;full_list_link&quot; id=&quot;class_list_link&quot;
230
- href=&quot;../class_list.html&quot;&gt;
231
- Class List
232
- &lt;/a&gt;
233
-
234
- &lt;a class=&quot;full_list_link&quot; id=&quot;method_list_link&quot;
235
- href=&quot;../method_list.html&quot;&gt;
236
- Method List
237
- &lt;/a&gt;
238
-
239
- &lt;a class=&quot;full_list_link&quot; id=&quot;file_list_link&quot;
240
- href=&quot;../file_list.html&quot;&gt;
241
- File List
242
- &lt;/a&gt;</pre>
243
-
244
- <p>&lt;/div&gt;</p>
245
-
246
- <pre> &lt;div class=&quot;clear&quot;&gt;&lt;/div&gt;
247
- &lt;/div&gt;
248
-
249
- &lt;iframe id=&quot;search_frame&quot;&gt;&lt;/iframe&gt;
250
-
251
- &lt;div id=&quot;content&quot;&gt;&lt;h1&gt;Class: NEAT::Controller</pre>
252
-
253
- <p>&lt;/h1&gt;</p>
254
-
255
- <p>&lt;dl class=“box”&gt;</p>
256
-
257
- <pre>&lt;dt class=&quot;r1&quot;&gt;Inherits:&lt;/dt&gt;
258
- &lt;dd class=&quot;r1&quot;&gt;
259
- &lt;span class=&quot;inheritName&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html&quot; title=&quot;NEAT::NeatOb (class)&quot;&gt;NeatOb&lt;/a&gt;&lt;/span&gt;&lt;/span&gt;
260
-
261
- &lt;ul class=&quot;fullTree&quot;&gt;
262
- &lt;li&gt;Object&lt;/li&gt;
263
-
264
- &lt;li class=&quot;next&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html&quot; title=&quot;NEAT::NeatOb (class)&quot;&gt;NeatOb&lt;/a&gt;&lt;/span&gt;&lt;/li&gt;
265
-
266
- &lt;li class=&quot;next&quot;&gt;NEAT::Controller&lt;/li&gt;
267
-
268
- &lt;/ul&gt;
269
- &lt;a href=&quot;#&quot; class=&quot;inheritanceTree&quot;&gt;show all&lt;/a&gt;
270
-
271
- &lt;/dd&gt;
272
-
273
- &lt;dt class=&quot;r2 last&quot;&gt;Defined in:&lt;/dt&gt;
274
- &lt;dd class=&quot;r2 last&quot;&gt;lib/rubyneat/rubyneat.rb&lt;/dd&gt;</pre>
275
-
276
- <p>&lt;/dl&gt; &lt;div class=“clear”&gt;&lt;/div&gt;</p>
277
-
278
- <p>&lt;h2&gt;Overview&lt;/h2&gt;&lt;div class=“docstring”&gt;</p>
279
-
280
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
281
-
282
- <p>&lt;h1 id=“label-Controller+for+all+operations+of+RubyNEAT”&gt;Controller
283
- for all operations of <a href="../../RubyNEAT.html">RubyNEAT</a>&lt;/h1&gt;</p>
284
-
285
- <p>&lt;p&gt;This object contains all the specifications and details for
286
- evolving and evaluation of the <a href="../../RubyNEAT.html">RubyNEAT</a>
287
- system. It is a type of “World”, if you will, for the entire
288
- enterprise.&lt;/p&gt;</p>
289
-
290
- <p>&lt;p&gt;Your application shall only have one Controller.&lt;/p&gt;</p>
291
-
292
- <pre>&lt;/div&gt;</pre>
293
-
294
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
295
-
296
- <p>&lt;/div&gt;&lt;h2&gt;Defined Under Namespace&lt;/h2&gt; &lt;p
297
- class=“children”&gt;</p>
298
-
299
- <pre>&lt;strong class=&quot;classes&quot;&gt;Classes:&lt;/strong&gt; &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;Controller/NeatSettings.html&quot; title=&quot;NEAT::Controller::NeatSettings (class)&quot;&gt;NeatSettings&lt;/a&gt;&lt;/span&gt;</pre>
300
-
301
- <p>&lt;/p&gt;</p>
302
-
303
- <pre>&lt;h2&gt;Instance Attribute Summary &lt;small&gt;(&lt;a href=&quot;#&quot; class=&quot;summary_toggle&quot;&gt;collapse&lt;/a&gt;)&lt;/small&gt;&lt;/h2&gt;
304
- &lt;ul class=&quot;summary&quot;&gt;
305
-
306
- &lt;li class=&quot;public &quot;&gt;
307
- &lt;span class=&quot;summary_signature&quot;&gt;
308
-
309
- &lt;a href=&quot;#compare_func-instance_method&quot; title=&quot;#compare_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;compare_func&lt;/strong&gt; &lt;/a&gt;
310
-
311
- &lt;/span&gt;
312
-
313
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
314
-
315
- <p>&lt;p&gt;Compare function for fitness Cost function for integrating in the
316
- cost to the fitness scalar.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
317
-
318
- <p>&lt;/li&gt;</p>
319
-
320
- <pre> &lt;li class=&quot;public &quot;&gt;
321
- &lt;span class=&quot;summary_signature&quot;&gt;
322
-
323
- &lt;a href=&quot;#cost_func-instance_method&quot; title=&quot;#cost_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;cost_func&lt;/strong&gt; &lt;/a&gt;
324
-
325
- &lt;/span&gt;
326
-
327
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
328
-
329
- <p>&lt;p&gt;Compare function for fitness Cost function for integrating in the
330
- cost to the fitness scalar.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
331
-
332
- <p>&lt;/li&gt;</p>
333
-
334
- <pre> &lt;li class=&quot;public &quot;&gt;
335
- &lt;span class=&quot;summary_signature&quot;&gt;
336
-
337
- &lt;a href=&quot;#end_run_func-instance_method&quot; title=&quot;#end_run_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;end_run_func&lt;/strong&gt; &lt;/a&gt;
338
-
339
- &lt;/span&gt;
340
-
341
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
342
-
343
- <p>&lt;p&gt;End run function to call at the end of each generational run Also
344
- report_hook to dump reports for the user, etc.&lt;/p&gt;
345
- &lt;/div&gt;&lt;/span&gt;</p>
346
-
347
- <p>&lt;/li&gt;</p>
348
-
349
- <pre> &lt;li class=&quot;public &quot;&gt;
350
- &lt;span class=&quot;summary_signature&quot;&gt;
351
-
352
- &lt;a href=&quot;#evaluator-instance_method&quot; title=&quot;#evaluator (instance method)&quot;&gt;- (Object) &lt;strong&gt;evaluator&lt;/strong&gt; &lt;/a&gt;
353
-
354
- &lt;/span&gt;
355
-
356
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
357
-
358
- <p>&lt;p&gt;Returns the value of attribute evaluator.&lt;/p&gt;
359
- &lt;/div&gt;&lt;/span&gt;</p>
360
-
361
- <p>&lt;/li&gt;</p>
362
-
363
- <pre> &lt;li class=&quot;public &quot;&gt;
364
- &lt;span class=&quot;summary_signature&quot;&gt;
365
-
366
- &lt;a href=&quot;#evaluator_class-instance_method&quot; title=&quot;#evaluator_class (instance method)&quot;&gt;- (Object) &lt;strong&gt;evaluator_class&lt;/strong&gt; &lt;/a&gt;
367
-
368
- &lt;/span&gt;
369
-
370
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
371
-
372
- <p>&lt;p&gt;Returns the value of attribute evaluator_class.&lt;/p&gt;
373
- &lt;/div&gt;&lt;/span&gt;</p>
374
-
375
- <p>&lt;/li&gt;</p>
376
-
377
- <pre> &lt;li class=&quot;public &quot;&gt;
378
- &lt;span class=&quot;summary_signature&quot;&gt;
379
-
380
- &lt;a href=&quot;#evolver-instance_method&quot; title=&quot;#evolver (instance method)&quot;&gt;- (Object) &lt;strong&gt;evolver&lt;/strong&gt; &lt;/a&gt;
381
-
382
- &lt;/span&gt;
383
-
384
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
385
-
386
- <p>&lt;p&gt;Returns the value of attribute evolver.&lt;/p&gt;
387
- &lt;/div&gt;&lt;/span&gt;</p>
388
-
389
- <p>&lt;/li&gt;</p>
390
-
391
- <pre> &lt;li class=&quot;public &quot;&gt;
392
- &lt;span class=&quot;summary_signature&quot;&gt;
393
-
394
- &lt;a href=&quot;#evolver_class-instance_method&quot; title=&quot;#evolver_class (instance method)&quot;&gt;- (Object) &lt;strong&gt;evolver_class&lt;/strong&gt; &lt;/a&gt;
395
-
396
- &lt;/span&gt;
397
-
398
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
399
-
400
- <p>&lt;p&gt;Returns the value of attribute evolver_class.&lt;/p&gt;
401
- &lt;/div&gt;&lt;/span&gt;</p>
402
-
403
- <p>&lt;/li&gt;</p>
404
-
405
- <pre> &lt;li class=&quot;public &quot;&gt;
406
- &lt;span class=&quot;summary_signature&quot;&gt;
407
-
408
- &lt;a href=&quot;#expressor-instance_method&quot; title=&quot;#expressor (instance method)&quot;&gt;- (Object) &lt;strong&gt;expressor&lt;/strong&gt; &lt;/a&gt;
409
-
410
- &lt;/span&gt;
411
-
412
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
413
-
414
- <p>&lt;p&gt;Returns the value of attribute expressor.&lt;/p&gt;
415
- &lt;/div&gt;&lt;/span&gt;</p>
416
-
417
- <p>&lt;/li&gt;</p>
418
-
419
- <pre> &lt;li class=&quot;public &quot;&gt;
420
- &lt;span class=&quot;summary_signature&quot;&gt;
421
-
422
- &lt;a href=&quot;#expressor_class-instance_method&quot; title=&quot;#expressor_class (instance method)&quot;&gt;- (Object) &lt;strong&gt;expressor_class&lt;/strong&gt; &lt;/a&gt;
423
-
424
- &lt;/span&gt;
425
-
426
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
427
-
428
- <p>&lt;p&gt;Returns the value of attribute expressor_class.&lt;/p&gt;
429
- &lt;/div&gt;&lt;/span&gt;</p>
430
-
431
- <p>&lt;/li&gt;</p>
432
-
433
- <pre> &lt;li class=&quot;public &quot;&gt;
434
- &lt;span class=&quot;summary_signature&quot;&gt;
435
-
436
- &lt;a href=&quot;#fitness_func-instance_method&quot; title=&quot;#fitness_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;fitness_func&lt;/strong&gt; &lt;/a&gt;
437
-
438
- &lt;/span&gt;
439
-
440
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
441
-
442
- <p>&lt;p&gt;Fitness function that Critters shall be rated on.&lt;/p&gt;
443
- &lt;/div&gt;&lt;/span&gt;</p>
444
-
445
- <p>&lt;/li&gt;</p>
446
-
447
- <pre> &lt;li class=&quot;public &quot;&gt;
448
- &lt;span class=&quot;summary_signature&quot;&gt;
449
-
450
- &lt;a href=&quot;#generation_num-instance_method&quot; title=&quot;#generation_num (instance method)&quot;&gt;- (Object) &lt;strong&gt;generation_num&lt;/strong&gt; &lt;/a&gt;
451
-
452
- &lt;/span&gt;
453
-
454
- &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
455
-
456
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
457
-
458
- <p>&lt;p&gt;Current generation count.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
459
-
460
- <p>&lt;/li&gt;</p>
461
-
462
- <pre> &lt;li class=&quot;public &quot;&gt;
463
- &lt;span class=&quot;summary_signature&quot;&gt;
464
-
465
- &lt;a href=&quot;#glob_innov_num-instance_method&quot; title=&quot;#glob_innov_num (instance method)&quot;&gt;- (Object) &lt;strong&gt;glob_innov_num&lt;/strong&gt; &lt;/a&gt;
466
-
467
- &lt;/span&gt;
468
-
469
- &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
470
-
471
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
472
-
473
- <p>&lt;p&gt;global innovation number.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
474
-
475
- <p>&lt;/li&gt;</p>
476
-
477
- <pre> &lt;li class=&quot;public &quot;&gt;
478
- &lt;span class=&quot;summary_signature&quot;&gt;
479
-
480
- &lt;a href=&quot;#log-instance_method&quot; title=&quot;#log (instance method)&quot;&gt;- (Object) &lt;strong&gt;log&lt;/strong&gt; &lt;/a&gt;
481
-
482
- &lt;/span&gt;
483
-
484
- &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
485
-
486
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
487
-
488
- <p>&lt;p&gt;Logger object for all of <a
489
- href="../../RubyNEAT.html">RubyNEAT</a>.&lt;/p&gt;
490
- &lt;/div&gt;&lt;/span&gt;</p>
491
-
492
- <p>&lt;/li&gt;</p>
493
-
494
- <pre> &lt;li class=&quot;public &quot;&gt;
495
- &lt;span class=&quot;summary_signature&quot;&gt;
496
-
497
- &lt;a href=&quot;#neural_hidden-instance_method&quot; title=&quot;#neural_hidden (instance method)&quot;&gt;- (Object) &lt;strong&gt;neural_hidden&lt;/strong&gt; &lt;/a&gt;
498
-
499
- &lt;/span&gt;
500
-
501
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
502
-
503
- <p>&lt;p&gt;Class map of named input and output neurons (each critter will
504
- have instantiations of these) name: InputNeuralClass (usually
505
- InputNeuron).&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
506
-
507
- <p>&lt;/li&gt;</p>
508
-
509
- <pre> &lt;li class=&quot;public &quot;&gt;
510
- &lt;span class=&quot;summary_signature&quot;&gt;
511
-
512
- &lt;a href=&quot;#neural_inputs-instance_method&quot; title=&quot;#neural_inputs (instance method)&quot;&gt;- (Object) &lt;strong&gt;neural_inputs&lt;/strong&gt; &lt;/a&gt;
513
-
514
- &lt;/span&gt;
515
-
516
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
517
-
518
- <p>&lt;p&gt;Class map of named input and output neurons (each critter will
519
- have instantiations of these) name: InputNeuralClass (usually
520
- InputNeuron).&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
521
-
522
- <p>&lt;/li&gt;</p>
523
-
524
- <pre> &lt;li class=&quot;public &quot;&gt;
525
- &lt;span class=&quot;summary_signature&quot;&gt;
526
-
527
- &lt;a href=&quot;#neural_outputs-instance_method&quot; title=&quot;#neural_outputs (instance method)&quot;&gt;- (Object) &lt;strong&gt;neural_outputs&lt;/strong&gt; &lt;/a&gt;
528
-
529
- &lt;/span&gt;
530
-
531
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
532
-
533
- <p>&lt;p&gt;Class map of named input and output neurons (each critter will
534
- have instantiations of these) name: InputNeuralClass (usually
535
- InputNeuron).&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
536
-
537
- <p>&lt;/li&gt;</p>
538
-
539
- <pre> &lt;li class=&quot;public &quot;&gt;
540
- &lt;span class=&quot;summary_signature&quot;&gt;
541
-
542
- &lt;a href=&quot;#neuron_catalog-instance_method&quot; title=&quot;#neuron_catalog (instance method)&quot;&gt;- (Object) &lt;strong&gt;neuron_catalog&lt;/strong&gt; &lt;/a&gt;
543
-
544
- &lt;/span&gt;
545
-
546
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
547
-
548
- <p>&lt;p&gt;catalog of neurons classes to use { weight =&amp;gt; nclass, …
549
- }.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
550
-
551
- <p>&lt;/li&gt;</p>
552
-
553
- <pre> &lt;li class=&quot;public &quot;&gt;
554
- &lt;span class=&quot;summary_signature&quot;&gt;
555
-
556
- &lt;a href=&quot;#parms-instance_method&quot; title=&quot;#parms (instance method)&quot;&gt;- (Object) &lt;strong&gt;parms&lt;/strong&gt; &lt;/a&gt;
557
-
558
- &lt;/span&gt;
559
-
560
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
561
-
562
- <p>&lt;p&gt;Parameters for evolution (NeatParameters).&lt;/p&gt;
563
- &lt;/div&gt;&lt;/span&gt;</p>
564
-
565
- <p>&lt;/li&gt;</p>
566
-
567
- <pre> &lt;li class=&quot;public &quot;&gt;
568
- &lt;span class=&quot;summary_signature&quot;&gt;
569
-
570
- &lt;a href=&quot;#population-instance_method&quot; title=&quot;#population (instance method)&quot;&gt;- (Object) &lt;strong&gt;population&lt;/strong&gt; &lt;/a&gt;
571
-
572
- &lt;/span&gt;
573
-
574
- &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
575
-
576
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
577
-
578
- <p>&lt;p&gt;population object and class specification.&lt;/p&gt;
579
- &lt;/div&gt;&lt;/span&gt;</p>
580
-
581
- <p>&lt;/li&gt;</p>
582
-
583
- <pre> &lt;li class=&quot;public &quot;&gt;
584
- &lt;span class=&quot;summary_signature&quot;&gt;
585
-
586
- &lt;a href=&quot;#population_class-instance_method&quot; title=&quot;#population_class (instance method)&quot;&gt;- (Object) &lt;strong&gt;population_class&lt;/strong&gt; &lt;/a&gt;
587
-
588
- &lt;/span&gt;
589
-
590
- &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
591
-
592
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
593
-
594
- <p>&lt;p&gt;population object and class specification.&lt;/p&gt;
595
- &lt;/div&gt;&lt;/span&gt;</p>
596
-
597
- <p>&lt;/li&gt;</p>
598
-
599
- <pre> &lt;li class=&quot;public &quot;&gt;
600
- &lt;span class=&quot;summary_signature&quot;&gt;
601
-
602
- &lt;a href=&quot;#population_history-instance_method&quot; title=&quot;#population_history (instance method)&quot;&gt;- (Object) &lt;strong&gt;population_history&lt;/strong&gt; &lt;/a&gt;
603
-
604
- &lt;/span&gt;
605
-
606
- &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
607
-
608
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
609
-
610
- <p>&lt;p&gt;population object and class specification.&lt;/p&gt;
611
- &lt;/div&gt;&lt;/span&gt;</p>
612
-
613
- <p>&lt;/li&gt;</p>
614
-
615
- <pre> &lt;li class=&quot;public &quot;&gt;
616
- &lt;span class=&quot;summary_signature&quot;&gt;
617
-
618
- &lt;a href=&quot;#query_func-instance_method&quot; title=&quot;#query_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;query_func&lt;/strong&gt; &lt;/a&gt;
619
-
620
- &lt;/span&gt;
621
-
622
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
623
-
624
- <p>&lt;p&gt;Query function that Critters shall call.&lt;/p&gt;
625
- &lt;/div&gt;&lt;/span&gt;</p>
626
-
627
- <p>&lt;/li&gt;</p>
628
-
629
- <pre> &lt;li class=&quot;public &quot;&gt;
630
- &lt;span class=&quot;summary_signature&quot;&gt;
631
-
632
- &lt;a href=&quot;#recurrence_func-instance_method&quot; title=&quot;#recurrence_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;recurrence_func&lt;/strong&gt; &lt;/a&gt;
633
-
634
- &lt;/span&gt;
635
-
636
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
637
-
638
- <p>&lt;p&gt;Recurrence function that Critters will yield to.&lt;/p&gt;
639
- &lt;/div&gt;&lt;/span&gt;</p>
640
-
641
- <p>&lt;/li&gt;</p>
642
-
643
- <pre> &lt;li class=&quot;public &quot;&gt;
644
- &lt;span class=&quot;summary_signature&quot;&gt;
645
-
646
- &lt;a href=&quot;#report_hook-instance_method&quot; title=&quot;#report_hook (instance method)&quot;&gt;- (Object) &lt;strong&gt;report_hook&lt;/strong&gt; &lt;/a&gt;
647
-
648
- &lt;/span&gt;
649
-
650
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
651
-
652
- <p>&lt;p&gt;End run function to call at the end of each generational run Also
653
- report_hook to dump reports for the user, etc.&lt;/p&gt;
654
- &lt;/div&gt;&lt;/span&gt;</p>
655
-
656
- <p>&lt;/li&gt;</p>
657
-
658
- <pre> &lt;li class=&quot;public &quot;&gt;
659
- &lt;span class=&quot;summary_signature&quot;&gt;
660
-
661
- &lt;a href=&quot;#seq_num-instance_method&quot; title=&quot;#seq_num (instance method)&quot;&gt;- (Object) &lt;strong&gt;seq_num&lt;/strong&gt; &lt;/a&gt;
662
-
663
- &lt;/span&gt;
664
-
665
- &lt;span class=&quot;note title readonly&quot;&gt;readonly&lt;/span&gt;
666
-
667
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
668
-
669
- <p>&lt;p&gt;current sequence number being evaluated.&lt;/p&gt;
670
- &lt;/div&gt;&lt;/span&gt;</p>
671
-
672
- <p>&lt;/li&gt;</p>
673
-
674
- <pre> &lt;li class=&quot;public &quot;&gt;
675
- &lt;span class=&quot;summary_signature&quot;&gt;
676
-
677
- &lt;a href=&quot;#stop_on_fit_func-instance_method&quot; title=&quot;#stop_on_fit_func (instance method)&quot;&gt;- (Object) &lt;strong&gt;stop_on_fit_func&lt;/strong&gt; &lt;/a&gt;
678
-
679
- &lt;/span&gt;
680
-
681
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
682
-
683
- <p>&lt;p&gt;Compare function for fitness Cost function for integrating in the
684
- cost to the fitness scalar.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
685
-
686
- <p>&lt;/li&gt;</p>
687
-
688
- <pre> &lt;li class=&quot;public &quot;&gt;
689
- &lt;span class=&quot;summary_signature&quot;&gt;
690
-
691
- &lt;a href=&quot;#verbosity-instance_method&quot; title=&quot;#verbosity (instance method)&quot;&gt;- (Object) &lt;strong&gt;verbosity&lt;/strong&gt; &lt;/a&gt;
692
-
693
- &lt;/span&gt;
694
-
695
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
696
-
697
- <p>&lt;p&gt;Global verbosity level: 1 - normal (the default) 2 - really
698
- verbose 3 - maximally verbose Use in conjunction with log.debug.&lt;/p&gt;
699
- &lt;/div&gt;&lt;/span&gt;</p>
700
-
701
- <p>&lt;/li&gt;</p>
702
-
703
- <pre>&lt;/ul&gt;
704
-
705
- &lt;h3 class=&quot;inherited&quot;&gt;Attributes inherited from &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html&quot; title=&quot;NEAT::NeatOb (class)&quot;&gt;NeatOb&lt;/a&gt;&lt;/span&gt;&lt;/h3&gt;
706
- &lt;p class=&quot;inherited&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#controller-instance_method&quot; title=&quot;NEAT::NeatOb#controller (method)&quot;&gt;#controller&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#name-instance_method&quot; title=&quot;NEAT::NeatOb#name (method)&quot;&gt;#name&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;
707
-
708
- &lt;h2&gt;
709
- Instance Method Summary
710
- &lt;small&gt;(&lt;a href=&quot;#&quot; class=&quot;summary_toggle&quot;&gt;collapse&lt;/a&gt;)&lt;/small&gt;
711
- &lt;/h2&gt;
712
-
713
- &lt;ul class=&quot;summary&quot;&gt;
714
-
715
- &lt;li class=&quot;public &quot;&gt;
716
- &lt;span class=&quot;summary_signature&quot;&gt;
717
-
718
- &lt;a href=&quot;#gaussian-instance_method&quot; title=&quot;#gaussian (instance method)&quot;&gt;- (Object) &lt;strong&gt;gaussian&lt;/strong&gt; &lt;/a&gt;
719
-
720
- &lt;/span&gt;
721
-
722
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;&lt;/div&gt;&lt;/span&gt;</pre>
723
-
724
- <p>&lt;/li&gt;</p>
725
-
726
- <pre> &lt;li class=&quot;public &quot;&gt;
727
- &lt;span class=&quot;summary_signature&quot;&gt;
728
-
729
- &lt;a href=&quot;#initialize-instance_method&quot; title=&quot;#initialize (instance method)&quot;&gt;- (Controller) &lt;strong&gt;initialize&lt;/strong&gt;(neural_inputs: nil, neural_outputs: nil, neural_hidden: nil, parameters: NeatSettings.new, &amp;amp;block) &lt;/a&gt;
730
-
731
- &lt;/span&gt;
732
-
733
- &lt;span class=&quot;note title constructor&quot;&gt;constructor&lt;/span&gt;
734
-
735
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;&lt;ul&gt;&lt;li&gt;</pre>
736
-
737
- <p>&lt;p&gt;neural_inputs – array of input classes - neural_outputs – array of
738
- output classes - parameters – NeatParameters object, or a path to a YAML
739
- file to create this.&lt;/p&gt; &lt;/li&gt;&lt;/ul&gt;
740
- &lt;/div&gt;&lt;/span&gt;</p>
741
-
742
- <p>&lt;/li&gt;</p>
743
-
744
- <pre> &lt;li class=&quot;public &quot;&gt;
745
- &lt;span class=&quot;summary_signature&quot;&gt;
746
-
747
- &lt;a href=&quot;#new_innovation-instance_method&quot; title=&quot;#new_innovation (instance method)&quot;&gt;- (Object) &lt;strong&gt;new_innovation&lt;/strong&gt; &lt;/a&gt;
748
-
749
- &lt;/span&gt;
750
-
751
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;&lt;/div&gt;&lt;/span&gt;</pre>
752
-
753
- <p>&lt;/li&gt;</p>
754
-
755
- <pre> &lt;li class=&quot;public &quot;&gt;
756
- &lt;span class=&quot;summary_signature&quot;&gt;
757
-
758
- &lt;a href=&quot;#run-instance_method&quot; title=&quot;#run (instance method)&quot;&gt;- (Object) &lt;strong&gt;run&lt;/strong&gt; &lt;/a&gt;
759
-
760
- &lt;/span&gt;
761
-
762
- &lt;span class=&quot;summary_desc&quot;&gt;&lt;div class=&#39;inline&#39;&gt;</pre>
763
-
764
- <p>&lt;p&gt;Run this evolution.&lt;/p&gt; &lt;/div&gt;&lt;/span&gt;</p>
765
-
766
- <p>&lt;/li&gt;</p>
767
-
768
- <pre> &lt;/ul&gt;
769
-
770
- &lt;h3 class=&quot;inherited&quot;&gt;Methods inherited from &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html&quot; title=&quot;NEAT::NeatOb (class)&quot;&gt;NeatOb&lt;/a&gt;&lt;/span&gt;&lt;/h3&gt;
771
- &lt;p class=&quot;inherited&quot;&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#log-class_method&quot; title=&quot;NEAT::NeatOb.log (method)&quot;&gt;log&lt;/a&gt;&lt;/span&gt;, &lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;NeatOb.html#to_s-instance_method&quot; title=&quot;NEAT::NeatOb#to_s (method)&quot;&gt;#to_s&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;
772
-
773
- &lt;div id=&quot;constructor_details&quot; class=&quot;method_details_list&quot;&gt;
774
- &lt;h2&gt;Constructor Details&lt;/h2&gt;
775
-
776
- &lt;div class=&quot;method_details first&quot;&gt;
777
- &lt;h3 class=&quot;signature first&quot; id=&quot;initialize-instance_method&quot;&gt;
778
-
779
- - (&lt;tt&gt;&lt;span class=&#39;object_link&#39;&gt;&lt;a href=&quot;&quot; title=&quot;NEAT::Controller (class)&quot;&gt;Controller&lt;/a&gt;&lt;/span&gt;&lt;/tt&gt;) &lt;strong&gt;initialize&lt;/strong&gt;(neural_inputs: nil, neural_outputs: nil, neural_hidden: nil, parameters: NeatSettings.new, &amp;amp;block)</pre>
780
-
781
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
782
-
783
- <pre>&lt;div class=&quot;discussion&quot;&gt;
784
- &lt;ul&gt;&lt;li&gt;</pre>
785
-
786
- <p>&lt;p&gt;neural_inputs – array of input classes&lt;/p&gt;
787
- &lt;/li&gt;&lt;li&gt; &lt;p&gt;neural_outputs – array of output
788
- classes&lt;/p&gt; &lt;/li&gt;&lt;li&gt; &lt;p&gt;parameters –
789
- NeatParameters object, or a path to a YAML file to create this.&lt;/p&gt;
790
- &lt;/li&gt;&lt;/ul&gt;</p>
791
-
792
- <pre>&lt;/div&gt;</pre>
793
-
794
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
795
-
796
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
797
-
798
- <pre>&lt;tr&gt;
799
- &lt;td&gt;
800
- &lt;pre class=&quot;lines&quot;&gt;</pre>
801
-
802
- <p>334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352
803
- 353 354 355 356 357 358 359 360 361 362 363 364 365&lt;/pre&gt;</p>
804
-
805
- <pre>&lt;/td&gt;
806
- &lt;td&gt;
807
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 334&lt;/span&gt;</pre>
808
-
809
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
810
- identifier rubyid_initialize&#39;&gt;initialize&lt;/span&gt;&lt;span
811
- class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span
812
- class=&#39;label&#39;&gt;neural_inputs:&lt;/span&gt; &lt;span
813
- class=&#39;kw&#39;&gt;nil&lt;/span&gt;&lt;span
814
- class=&#39;comma&#39;&gt;,&lt;/span&gt;</p>
815
-
816
- <pre> &lt;span class=&#39;label&#39;&gt;neural_outputs:&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;nil&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt;
817
- &lt;span class=&#39;label&#39;&gt;neural_hidden:&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;nil&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt;
818
- &lt;span class=&#39;label&#39;&gt;parameters:&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;NeatSettings&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_new&#39;&gt;new&lt;/span&gt;&lt;span class=&#39;comma&#39;&gt;,&lt;/span&gt;
819
- &lt;span class=&#39;op&#39;&gt;&amp;amp;&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_block&#39;&gt;block&lt;/span&gt;&lt;span class=&#39;rparen&#39;&gt;)&lt;/span&gt;
820
- &lt;span class=&#39;kw&#39;&gt;super&lt;/span&gt;&lt;span class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;kw&#39;&gt;self&lt;/span&gt;&lt;span class=&#39;rparen&#39;&gt;)&lt;/span&gt;
821
- &lt;span class=&#39;ivar&#39;&gt;@verbosity&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;int&#39;&gt;1&lt;/span&gt;
822
- &lt;span class=&#39;ivar&#39;&gt;@glob_innov_num&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;int&#39;&gt;0&lt;/span&gt;
823
- &lt;span class=&#39;ivar&#39;&gt;@gaussian&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;Distribution&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;const&#39;&gt;Normal&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_rng&#39;&gt;rng&lt;/span&gt;
824
- &lt;span class=&#39;ivar&#39;&gt;@population_history&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;lbracket&#39;&gt;[&lt;/span&gt;&lt;span class=&#39;rbracket&#39;&gt;]&lt;/span&gt;
825
- &lt;span class=&#39;ivar&#39;&gt;@evolver&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;Evolver&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_new&#39;&gt;new&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;self&lt;/span&gt;
826
- &lt;span class=&#39;ivar&#39;&gt;@expressor&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;Expressor&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_new&#39;&gt;new&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;self&lt;/span&gt;
827
-
828
- &lt;span class=&#39;ivar&#39;&gt;@neuron_catalog&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;Neuron&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_neuron_types&#39;&gt;neuron_types&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_clone&#39;&gt;clone&lt;/span&gt;
829
- &lt;span class=&#39;ivar&#39;&gt;@neural_inputs&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_neural_inputs&#39;&gt;neural_inputs&lt;/span&gt;
830
- &lt;span class=&#39;ivar&#39;&gt;@neural_outputs&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_neural_outputs&#39;&gt;neural_outputs&lt;/span&gt;
831
- &lt;span class=&#39;ivar&#39;&gt;@neural_hidden&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_neural_hidden&#39;&gt;neural_hidden&lt;/span&gt;
832
-
833
- &lt;span class=&#39;comment&#39;&gt;# Default classes for population and operators, etc.</pre>
834
-
835
- <p>&lt;/span&gt; &lt;span
836
- class=&#39;ivar&#39;&gt;@population_class&lt;/span&gt; &lt;span
837
- class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span
838
- class=&#39;const&#39;&gt;NEAT&lt;/span&gt;&lt;span
839
- class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span
840
- class=&#39;const&#39;&gt;Population&lt;/span&gt;</p>
841
-
842
- <pre>&lt;span class=&#39;ivar&#39;&gt;@evaluator_class&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;NEAT&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;const&#39;&gt;Evaluator&lt;/span&gt;
843
- &lt;span class=&#39;ivar&#39;&gt;@expressor_class&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;NEAT&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;const&#39;&gt;Expressor&lt;/span&gt;
844
- &lt;span class=&#39;ivar&#39;&gt;@evolver_class&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;const&#39;&gt;NEAT&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;const&#39;&gt;Evolver&lt;/span&gt;
845
-
846
- &lt;span class=&#39;comment&#39;&gt;# Handle the parameters parameter. :-)</pre>
847
-
848
- <p>&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@parms&lt;/span&gt;
849
- &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span
850
- class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span class=&#39;id identifier
851
- rubyid_parameters&#39;&gt;parameters&lt;/span&gt;&lt;span
852
- class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
853
- rubyid_kind_of?&#39;&gt;kind_of?&lt;/span&gt; &lt;span
854
- class=&#39;const&#39;&gt;String&lt;/span&gt;</p>
855
-
856
- <pre> &lt;span class=&#39;id identifier rubyid_parameters&#39;&gt;parameters&lt;/span&gt;
857
- &lt;span class=&#39;kw&#39;&gt;else&lt;/span&gt; &lt;span class=&#39;comment&#39;&gt;# load it from a file</pre>
858
-
859
- <p>&lt;/span&gt; &lt;span class=&#39;id identifier
860
- rubyid_open&#39;&gt;open&lt;/span&gt;&lt;span
861
- class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;id identifier
862
- rubyid_parameters&#39;&gt;parameters&lt;/span&gt;&lt;span
863
- class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span
864
- class=&#39;tstring&#39;&gt;&lt;span
865
- class=&#39;tstring_beg&#39;&gt;&amp;#39;&lt;/span&gt;&lt;span
866
- class=&#39;tstring_content&#39;&gt;r&lt;/span&gt;&lt;span
867
- class=&#39;tstring_end&#39;&gt;&amp;#39;&lt;/span&gt;&lt;/span&gt;&lt;span
868
- class=&#39;rparen&#39;&gt;)&lt;/span&gt; &lt;span
869
- class=&#39;lbrace&#39;&gt;{&lt;/span&gt; &lt;span
870
- class=&#39;op&#39;&gt;|&lt;/span&gt;&lt;span class=&#39;id identifier
871
- rubyid_fd&#39;&gt;fd&lt;/span&gt;&lt;span
872
- class=&#39;op&#39;&gt;|&lt;/span&gt; &lt;span
873
- class=&#39;const&#39;&gt;YAML&lt;/span&gt;&lt;span
874
- class=&#39;op&#39;&gt;::&lt;/span&gt;&lt;span class=&#39;id identifier
875
- rubyid_load&#39;&gt;load&lt;/span&gt; &lt;span class=&#39;id identifier
876
- rubyid_fd&#39;&gt;fd&lt;/span&gt;&lt;span
877
- class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
878
- rubyid_read&#39;&gt;read&lt;/span&gt; &lt;span
879
- class=&#39;rbrace&#39;&gt;}&lt;/span&gt;</p>
880
-
881
- <pre> &lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;
882
- &lt;span class=&#39;id identifier rubyid_block&#39;&gt;block&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;kw&#39;&gt;self&lt;/span&gt;&lt;span class=&#39;rparen&#39;&gt;)&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_block&#39;&gt;block&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_nil?&#39;&gt;nil?&lt;/span&gt;</pre>
883
-
884
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
885
-
886
- <pre> &lt;/td&gt;
887
- &lt;/tr&gt;</pre>
888
-
889
- <p>&lt;/table&gt; &lt;/div&gt;</p>
890
-
891
- <p>&lt;/div&gt;</p>
892
-
893
- <pre>&lt;div id=&quot;instance_attr_details&quot; class=&quot;attr_details&quot;&gt;
894
- &lt;h2&gt;Instance Attribute Details&lt;/h2&gt;
895
-
896
- &lt;span id=&quot;compare_func=-instance_method&quot;&gt;&lt;/span&gt;
897
- &lt;div class=&quot;method_details first&quot;&gt;
898
- &lt;h3 class=&quot;signature first&quot; id=&quot;compare_func-instance_method&quot;&gt;
899
-
900
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;compare_func&lt;/strong&gt;</pre>
901
-
902
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
903
-
904
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
905
-
906
- <p>&lt;p&gt;Compare function for fitness Cost function for integrating in the
907
- cost to the fitness scalar.&lt;/p&gt;</p>
908
-
909
- <pre>&lt;/div&gt;</pre>
910
-
911
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
912
-
913
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
914
-
915
- <pre>&lt;tr&gt;
916
- &lt;td&gt;
917
- &lt;pre class=&quot;lines&quot;&gt;</pre>
918
-
919
- <p>197 198 199&lt;/pre&gt;</p>
920
-
921
- <pre>&lt;/td&gt;
922
- &lt;td&gt;
923
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 197&lt;/span&gt;</pre>
924
-
925
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
926
- identifier rubyid_compare_func&#39;&gt;compare_func&lt;/span&gt;</p>
927
-
928
- <pre>&lt;span class=&#39;ivar&#39;&gt;@compare_func&lt;/span&gt;</pre>
929
-
930
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
931
-
932
- <pre> &lt;/td&gt;
933
- &lt;/tr&gt;</pre>
934
-
935
- <p>&lt;/table&gt; &lt;/div&gt;</p>
936
-
937
- <pre> &lt;span id=&quot;cost_func=-instance_method&quot;&gt;&lt;/span&gt;
938
- &lt;div class=&quot;method_details &quot;&gt;
939
- &lt;h3 class=&quot;signature &quot; id=&quot;cost_func-instance_method&quot;&gt;
940
-
941
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;cost_func&lt;/strong&gt;</pre>
942
-
943
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
944
-
945
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
946
-
947
- <p>&lt;p&gt;Compare function for fitness Cost function for integrating in the
948
- cost to the fitness scalar.&lt;/p&gt;</p>
949
-
950
- <pre>&lt;/div&gt;</pre>
951
-
952
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
953
-
954
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
955
-
956
- <pre>&lt;tr&gt;
957
- &lt;td&gt;
958
- &lt;pre class=&quot;lines&quot;&gt;</pre>
959
-
960
- <p>197 198 199&lt;/pre&gt;</p>
961
-
962
- <pre>&lt;/td&gt;
963
- &lt;td&gt;
964
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 197&lt;/span&gt;</pre>
965
-
966
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
967
- identifier rubyid_cost_func&#39;&gt;cost_func&lt;/span&gt;</p>
968
-
969
- <pre>&lt;span class=&#39;ivar&#39;&gt;@cost_func&lt;/span&gt;</pre>
970
-
971
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
972
-
973
- <pre> &lt;/td&gt;
974
- &lt;/tr&gt;</pre>
975
-
976
- <p>&lt;/table&gt; &lt;/div&gt;</p>
977
-
978
- <pre> &lt;span id=&quot;end_run_func=-instance_method&quot;&gt;&lt;/span&gt;
979
- &lt;div class=&quot;method_details &quot;&gt;
980
- &lt;h3 class=&quot;signature &quot; id=&quot;end_run_func-instance_method&quot;&gt;
981
-
982
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;end_run_func&lt;/strong&gt;</pre>
983
-
984
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
985
-
986
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
987
-
988
- <p>&lt;p&gt;End run function to call at the end of each generational run Also
989
- report_hook to dump reports for the user, etc.&lt;/p&gt;</p>
990
-
991
- <pre>&lt;/div&gt;</pre>
992
-
993
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
994
-
995
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
996
-
997
- <pre>&lt;tr&gt;
998
- &lt;td&gt;
999
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1000
-
1001
- <p>201 202 203&lt;/pre&gt;</p>
1002
-
1003
- <pre>&lt;/td&gt;
1004
- &lt;td&gt;
1005
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 201&lt;/span&gt;</pre>
1006
-
1007
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1008
- identifier rubyid_end_run_func&#39;&gt;end_run_func&lt;/span&gt;</p>
1009
-
1010
- <pre>&lt;span class=&#39;ivar&#39;&gt;@end_run_func&lt;/span&gt;</pre>
1011
-
1012
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1013
-
1014
- <pre> &lt;/td&gt;
1015
- &lt;/tr&gt;</pre>
1016
-
1017
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1018
-
1019
- <pre> &lt;span id=&quot;evaluator=-instance_method&quot;&gt;&lt;/span&gt;
1020
- &lt;div class=&quot;method_details &quot;&gt;
1021
- &lt;h3 class=&quot;signature &quot; id=&quot;evaluator-instance_method&quot;&gt;
1022
-
1023
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;evaluator&lt;/strong&gt;</pre>
1024
-
1025
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1026
-
1027
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1028
-
1029
- <p>&lt;p&gt;Returns the value of attribute evaluator&lt;/p&gt;</p>
1030
-
1031
- <pre>&lt;/div&gt;</pre>
1032
-
1033
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1034
-
1035
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1036
-
1037
- <pre>&lt;tr&gt;
1038
- &lt;td&gt;
1039
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1040
-
1041
- <p>176 177 178&lt;/pre&gt;</p>
1042
-
1043
- <pre>&lt;/td&gt;
1044
- &lt;td&gt;
1045
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 176&lt;/span&gt;</pre>
1046
-
1047
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1048
- identifier rubyid_evaluator&#39;&gt;evaluator&lt;/span&gt;</p>
1049
-
1050
- <pre>&lt;span class=&#39;ivar&#39;&gt;@evaluator&lt;/span&gt;</pre>
1051
-
1052
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1053
-
1054
- <pre> &lt;/td&gt;
1055
- &lt;/tr&gt;</pre>
1056
-
1057
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1058
-
1059
- <pre> &lt;span id=&quot;evaluator_class=-instance_method&quot;&gt;&lt;/span&gt;
1060
- &lt;div class=&quot;method_details &quot;&gt;
1061
- &lt;h3 class=&quot;signature &quot; id=&quot;evaluator_class-instance_method&quot;&gt;
1062
-
1063
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;evaluator_class&lt;/strong&gt;</pre>
1064
-
1065
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1066
-
1067
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1068
-
1069
- <p>&lt;p&gt;Returns the value of attribute evaluator_class&lt;/p&gt;</p>
1070
-
1071
- <pre>&lt;/div&gt;</pre>
1072
-
1073
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1074
-
1075
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1076
-
1077
- <pre>&lt;tr&gt;
1078
- &lt;td&gt;
1079
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1080
-
1081
- <p>176 177 178&lt;/pre&gt;</p>
1082
-
1083
- <pre>&lt;/td&gt;
1084
- &lt;td&gt;
1085
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 176&lt;/span&gt;</pre>
1086
-
1087
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1088
- identifier rubyid_evaluator_class&#39;&gt;evaluator_class&lt;/span&gt;</p>
1089
-
1090
- <pre>&lt;span class=&#39;ivar&#39;&gt;@evaluator_class&lt;/span&gt;</pre>
1091
-
1092
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1093
-
1094
- <pre> &lt;/td&gt;
1095
- &lt;/tr&gt;</pre>
1096
-
1097
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1098
-
1099
- <pre> &lt;span id=&quot;evolver=-instance_method&quot;&gt;&lt;/span&gt;
1100
- &lt;div class=&quot;method_details &quot;&gt;
1101
- &lt;h3 class=&quot;signature &quot; id=&quot;evolver-instance_method&quot;&gt;
1102
-
1103
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;evolver&lt;/strong&gt;</pre>
1104
-
1105
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1106
-
1107
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1108
-
1109
- <p>&lt;p&gt;Returns the value of attribute evolver&lt;/p&gt;</p>
1110
-
1111
- <pre>&lt;/div&gt;</pre>
1112
-
1113
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1114
-
1115
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1116
-
1117
- <pre>&lt;tr&gt;
1118
- &lt;td&gt;
1119
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1120
-
1121
- <p>177 178 179&lt;/pre&gt;</p>
1122
-
1123
- <pre>&lt;/td&gt;
1124
- &lt;td&gt;
1125
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 177&lt;/span&gt;</pre>
1126
-
1127
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1128
- identifier rubyid_evolver&#39;&gt;evolver&lt;/span&gt;</p>
1129
-
1130
- <pre>&lt;span class=&#39;ivar&#39;&gt;@evolver&lt;/span&gt;</pre>
1131
-
1132
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1133
-
1134
- <pre> &lt;/td&gt;
1135
- &lt;/tr&gt;</pre>
1136
-
1137
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1138
-
1139
- <pre> &lt;span id=&quot;evolver_class=-instance_method&quot;&gt;&lt;/span&gt;
1140
- &lt;div class=&quot;method_details &quot;&gt;
1141
- &lt;h3 class=&quot;signature &quot; id=&quot;evolver_class-instance_method&quot;&gt;
1142
-
1143
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;evolver_class&lt;/strong&gt;</pre>
1144
-
1145
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1146
-
1147
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1148
-
1149
- <p>&lt;p&gt;Returns the value of attribute evolver_class&lt;/p&gt;</p>
1150
-
1151
- <pre>&lt;/div&gt;</pre>
1152
-
1153
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1154
-
1155
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1156
-
1157
- <pre>&lt;tr&gt;
1158
- &lt;td&gt;
1159
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1160
-
1161
- <p>177 178 179&lt;/pre&gt;</p>
1162
-
1163
- <pre>&lt;/td&gt;
1164
- &lt;td&gt;
1165
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 177&lt;/span&gt;</pre>
1166
-
1167
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1168
- identifier rubyid_evolver_class&#39;&gt;evolver_class&lt;/span&gt;</p>
1169
-
1170
- <pre>&lt;span class=&#39;ivar&#39;&gt;@evolver_class&lt;/span&gt;</pre>
1171
-
1172
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1173
-
1174
- <pre> &lt;/td&gt;
1175
- &lt;/tr&gt;</pre>
1176
-
1177
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1178
-
1179
- <pre> &lt;span id=&quot;expressor=-instance_method&quot;&gt;&lt;/span&gt;
1180
- &lt;div class=&quot;method_details &quot;&gt;
1181
- &lt;h3 class=&quot;signature &quot; id=&quot;expressor-instance_method&quot;&gt;
1182
-
1183
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;expressor&lt;/strong&gt;</pre>
1184
-
1185
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1186
-
1187
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1188
-
1189
- <p>&lt;p&gt;Returns the value of attribute expressor&lt;/p&gt;</p>
1190
-
1191
- <pre>&lt;/div&gt;</pre>
1192
-
1193
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1194
-
1195
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1196
-
1197
- <pre>&lt;tr&gt;
1198
- &lt;td&gt;
1199
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1200
-
1201
- <p>175 176 177&lt;/pre&gt;</p>
1202
-
1203
- <pre>&lt;/td&gt;
1204
- &lt;td&gt;
1205
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 175&lt;/span&gt;</pre>
1206
-
1207
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1208
- identifier rubyid_expressor&#39;&gt;expressor&lt;/span&gt;</p>
1209
-
1210
- <pre>&lt;span class=&#39;ivar&#39;&gt;@expressor&lt;/span&gt;</pre>
1211
-
1212
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1213
-
1214
- <pre> &lt;/td&gt;
1215
- &lt;/tr&gt;</pre>
1216
-
1217
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1218
-
1219
- <pre> &lt;span id=&quot;expressor_class=-instance_method&quot;&gt;&lt;/span&gt;
1220
- &lt;div class=&quot;method_details &quot;&gt;
1221
- &lt;h3 class=&quot;signature &quot; id=&quot;expressor_class-instance_method&quot;&gt;
1222
-
1223
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;expressor_class&lt;/strong&gt;</pre>
1224
-
1225
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1226
-
1227
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1228
-
1229
- <p>&lt;p&gt;Returns the value of attribute expressor_class&lt;/p&gt;</p>
1230
-
1231
- <pre>&lt;/div&gt;</pre>
1232
-
1233
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1234
-
1235
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1236
-
1237
- <pre>&lt;tr&gt;
1238
- &lt;td&gt;
1239
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1240
-
1241
- <p>175 176 177&lt;/pre&gt;</p>
1242
-
1243
- <pre>&lt;/td&gt;
1244
- &lt;td&gt;
1245
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 175&lt;/span&gt;</pre>
1246
-
1247
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1248
- identifier rubyid_expressor_class&#39;&gt;expressor_class&lt;/span&gt;</p>
1249
-
1250
- <pre>&lt;span class=&#39;ivar&#39;&gt;@expressor_class&lt;/span&gt;</pre>
1251
-
1252
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1253
-
1254
- <pre> &lt;/td&gt;
1255
- &lt;/tr&gt;</pre>
1256
-
1257
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1258
-
1259
- <pre> &lt;span id=&quot;fitness_func=-instance_method&quot;&gt;&lt;/span&gt;
1260
- &lt;div class=&quot;method_details &quot;&gt;
1261
- &lt;h3 class=&quot;signature &quot; id=&quot;fitness_func-instance_method&quot;&gt;
1262
-
1263
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;fitness_func&lt;/strong&gt;</pre>
1264
-
1265
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1266
-
1267
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1268
-
1269
- <p>&lt;p&gt;Fitness function that Critters shall be rated on.&lt;/p&gt;</p>
1270
-
1271
- <pre>&lt;/div&gt;</pre>
1272
-
1273
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1274
-
1275
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1276
-
1277
- <pre>&lt;tr&gt;
1278
- &lt;td&gt;
1279
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1280
-
1281
- <p>190 191 192&lt;/pre&gt;</p>
1282
-
1283
- <pre>&lt;/td&gt;
1284
- &lt;td&gt;
1285
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 190&lt;/span&gt;</pre>
1286
-
1287
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1288
- identifier rubyid_fitness_func&#39;&gt;fitness_func&lt;/span&gt;</p>
1289
-
1290
- <pre>&lt;span class=&#39;ivar&#39;&gt;@fitness_func&lt;/span&gt;</pre>
1291
-
1292
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1293
-
1294
- <pre> &lt;/td&gt;
1295
- &lt;/tr&gt;</pre>
1296
-
1297
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1298
-
1299
- <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1300
- &lt;div class=&quot;method_details &quot;&gt;
1301
- &lt;h3 class=&quot;signature &quot; id=&quot;generation_num-instance_method&quot;&gt;
1302
-
1303
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;generation_num&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1304
-
1305
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1306
-
1307
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1308
-
1309
- <p>&lt;p&gt;Current generation count&lt;/p&gt;</p>
1310
-
1311
- <pre>&lt;/div&gt;</pre>
1312
-
1313
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1314
-
1315
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1316
-
1317
- <pre>&lt;tr&gt;
1318
- &lt;td&gt;
1319
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1320
-
1321
- <p>160 161 162&lt;/pre&gt;</p>
1322
-
1323
- <pre>&lt;/td&gt;
1324
- &lt;td&gt;
1325
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 160&lt;/span&gt;</pre>
1326
-
1327
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1328
- identifier rubyid_generation_num&#39;&gt;generation_num&lt;/span&gt;</p>
1329
-
1330
- <pre>&lt;span class=&#39;ivar&#39;&gt;@generation_num&lt;/span&gt;</pre>
1331
-
1332
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1333
-
1334
- <pre> &lt;/td&gt;
1335
- &lt;/tr&gt;</pre>
1336
-
1337
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1338
-
1339
- <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1340
- &lt;div class=&quot;method_details &quot;&gt;
1341
- &lt;h3 class=&quot;signature &quot; id=&quot;glob_innov_num-instance_method&quot;&gt;
1342
-
1343
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;glob_innov_num&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1344
-
1345
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1346
-
1347
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1348
-
1349
- <p>&lt;p&gt;global innovation number&lt;/p&gt;</p>
1350
-
1351
- <pre>&lt;/div&gt;</pre>
1352
-
1353
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1354
-
1355
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1356
-
1357
- <pre>&lt;tr&gt;
1358
- &lt;td&gt;
1359
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1360
-
1361
- <p>154 155 156&lt;/pre&gt;</p>
1362
-
1363
- <pre>&lt;/td&gt;
1364
- &lt;td&gt;
1365
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 154&lt;/span&gt;</pre>
1366
-
1367
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1368
- identifier rubyid_glob_innov_num&#39;&gt;glob_innov_num&lt;/span&gt;</p>
1369
-
1370
- <pre>&lt;span class=&#39;ivar&#39;&gt;@glob_innov_num&lt;/span&gt;</pre>
1371
-
1372
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1373
-
1374
- <pre> &lt;/td&gt;
1375
- &lt;/tr&gt;</pre>
1376
-
1377
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1378
-
1379
- <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1380
- &lt;div class=&quot;method_details &quot;&gt;
1381
- &lt;h3 class=&quot;signature &quot; id=&quot;log-instance_method&quot;&gt;
1382
-
1383
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;log&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1384
-
1385
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1386
-
1387
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1388
-
1389
- <p>&lt;p&gt;Logger object for all of <a
1390
- href="../../RubyNEAT.html">RubyNEAT</a>&lt;/p&gt;</p>
1391
-
1392
- <pre>&lt;/div&gt;</pre>
1393
-
1394
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1395
-
1396
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1397
-
1398
- <pre>&lt;tr&gt;
1399
- &lt;td&gt;
1400
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1401
-
1402
- <p>204 205 206&lt;/pre&gt;</p>
1403
-
1404
- <pre>&lt;/td&gt;
1405
- &lt;td&gt;
1406
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 204&lt;/span&gt;</pre>
1407
-
1408
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1409
- identifier rubyid_log&#39;&gt;log&lt;/span&gt;</p>
1410
-
1411
- <pre>&lt;span class=&#39;ivar&#39;&gt;@log&lt;/span&gt;</pre>
1412
-
1413
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1414
-
1415
- <pre> &lt;/td&gt;
1416
- &lt;/tr&gt;</pre>
1417
-
1418
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1419
-
1420
- <pre> &lt;span id=&quot;neural_hidden=-instance_method&quot;&gt;&lt;/span&gt;
1421
- &lt;div class=&quot;method_details &quot;&gt;
1422
- &lt;h3 class=&quot;signature &quot; id=&quot;neural_hidden-instance_method&quot;&gt;
1423
-
1424
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;neural_hidden&lt;/strong&gt;</pre>
1425
-
1426
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1427
-
1428
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1429
-
1430
- <p>&lt;p&gt;Class map of named input and output neurons (each critter will
1431
- have instantiations of these) name: InputNeuralClass (usually
1432
- InputNeuron)&lt;/p&gt;</p>
1433
-
1434
- <pre>&lt;/div&gt;</pre>
1435
-
1436
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1437
-
1438
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1439
-
1440
- <pre>&lt;tr&gt;
1441
- &lt;td&gt;
1442
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1443
-
1444
- <p>167 168 169&lt;/pre&gt;</p>
1445
-
1446
- <pre>&lt;/td&gt;
1447
- &lt;td&gt;
1448
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 167&lt;/span&gt;</pre>
1449
-
1450
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1451
- identifier rubyid_neural_hidden&#39;&gt;neural_hidden&lt;/span&gt;</p>
1452
-
1453
- <pre>&lt;span class=&#39;ivar&#39;&gt;@neural_hidden&lt;/span&gt;</pre>
1454
-
1455
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1456
-
1457
- <pre> &lt;/td&gt;
1458
- &lt;/tr&gt;</pre>
1459
-
1460
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1461
-
1462
- <pre> &lt;span id=&quot;neural_inputs=-instance_method&quot;&gt;&lt;/span&gt;
1463
- &lt;div class=&quot;method_details &quot;&gt;
1464
- &lt;h3 class=&quot;signature &quot; id=&quot;neural_inputs-instance_method&quot;&gt;
1465
-
1466
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;neural_inputs&lt;/strong&gt;</pre>
1467
-
1468
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1469
-
1470
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1471
-
1472
- <p>&lt;p&gt;Class map of named input and output neurons (each critter will
1473
- have instantiations of these) name: InputNeuralClass (usually
1474
- InputNeuron)&lt;/p&gt;</p>
1475
-
1476
- <pre>&lt;/div&gt;</pre>
1477
-
1478
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1479
-
1480
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1481
-
1482
- <pre>&lt;tr&gt;
1483
- &lt;td&gt;
1484
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1485
-
1486
- <p>167 168 169&lt;/pre&gt;</p>
1487
-
1488
- <pre>&lt;/td&gt;
1489
- &lt;td&gt;
1490
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 167&lt;/span&gt;</pre>
1491
-
1492
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1493
- identifier rubyid_neural_inputs&#39;&gt;neural_inputs&lt;/span&gt;</p>
1494
-
1495
- <pre>&lt;span class=&#39;ivar&#39;&gt;@neural_inputs&lt;/span&gt;</pre>
1496
-
1497
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1498
-
1499
- <pre> &lt;/td&gt;
1500
- &lt;/tr&gt;</pre>
1501
-
1502
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1503
-
1504
- <pre> &lt;span id=&quot;neural_outputs=-instance_method&quot;&gt;&lt;/span&gt;
1505
- &lt;div class=&quot;method_details &quot;&gt;
1506
- &lt;h3 class=&quot;signature &quot; id=&quot;neural_outputs-instance_method&quot;&gt;
1507
-
1508
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;neural_outputs&lt;/strong&gt;</pre>
1509
-
1510
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1511
-
1512
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1513
-
1514
- <p>&lt;p&gt;Class map of named input and output neurons (each critter will
1515
- have instantiations of these) name: InputNeuralClass (usually
1516
- InputNeuron)&lt;/p&gt;</p>
1517
-
1518
- <pre>&lt;/div&gt;</pre>
1519
-
1520
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1521
-
1522
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1523
-
1524
- <pre>&lt;tr&gt;
1525
- &lt;td&gt;
1526
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1527
-
1528
- <p>167 168 169&lt;/pre&gt;</p>
1529
-
1530
- <pre>&lt;/td&gt;
1531
- &lt;td&gt;
1532
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 167&lt;/span&gt;</pre>
1533
-
1534
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1535
- identifier rubyid_neural_outputs&#39;&gt;neural_outputs&lt;/span&gt;</p>
1536
-
1537
- <pre>&lt;span class=&#39;ivar&#39;&gt;@neural_outputs&lt;/span&gt;</pre>
1538
-
1539
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1540
-
1541
- <pre> &lt;/td&gt;
1542
- &lt;/tr&gt;</pre>
1543
-
1544
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1545
-
1546
- <pre> &lt;span id=&quot;neuron_catalog=-instance_method&quot;&gt;&lt;/span&gt;
1547
- &lt;div class=&quot;method_details &quot;&gt;
1548
- &lt;h3 class=&quot;signature &quot; id=&quot;neuron_catalog-instance_method&quot;&gt;
1549
-
1550
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;neuron_catalog&lt;/strong&gt;</pre>
1551
-
1552
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1553
-
1554
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1555
-
1556
- <p>&lt;p&gt;catalog of neurons classes to use { weight =&amp;gt; nclass, …
1557
- }&lt;/p&gt;</p>
1558
-
1559
- <pre>&lt;/div&gt;</pre>
1560
-
1561
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1562
-
1563
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1564
-
1565
- <pre>&lt;tr&gt;
1566
- &lt;td&gt;
1567
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1568
-
1569
- <p>163 164 165&lt;/pre&gt;</p>
1570
-
1571
- <pre>&lt;/td&gt;
1572
- &lt;td&gt;
1573
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 163&lt;/span&gt;</pre>
1574
-
1575
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1576
- identifier rubyid_neuron_catalog&#39;&gt;neuron_catalog&lt;/span&gt;</p>
1577
-
1578
- <pre>&lt;span class=&#39;ivar&#39;&gt;@neuron_catalog&lt;/span&gt;</pre>
1579
-
1580
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1581
-
1582
- <pre> &lt;/td&gt;
1583
- &lt;/tr&gt;</pre>
1584
-
1585
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1586
-
1587
- <pre> &lt;span id=&quot;parms=-instance_method&quot;&gt;&lt;/span&gt;
1588
- &lt;div class=&quot;method_details &quot;&gt;
1589
- &lt;h3 class=&quot;signature &quot; id=&quot;parms-instance_method&quot;&gt;
1590
-
1591
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;parms&lt;/strong&gt;</pre>
1592
-
1593
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1594
-
1595
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1596
-
1597
- <p>&lt;p&gt;Parameters for evolution (NeatParameters)&lt;/p&gt;</p>
1598
-
1599
- <pre>&lt;/div&gt;</pre>
1600
-
1601
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1602
-
1603
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1604
-
1605
- <pre>&lt;tr&gt;
1606
- &lt;td&gt;
1607
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1608
-
1609
- <p>170 171 172&lt;/pre&gt;</p>
1610
-
1611
- <pre>&lt;/td&gt;
1612
- &lt;td&gt;
1613
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 170&lt;/span&gt;</pre>
1614
-
1615
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1616
- identifier rubyid_parms&#39;&gt;parms&lt;/span&gt;</p>
1617
-
1618
- <pre>&lt;span class=&#39;ivar&#39;&gt;@parms&lt;/span&gt;</pre>
1619
-
1620
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1621
-
1622
- <pre> &lt;/td&gt;
1623
- &lt;/tr&gt;</pre>
1624
-
1625
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1626
-
1627
- <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1628
- &lt;div class=&quot;method_details &quot;&gt;
1629
- &lt;h3 class=&quot;signature &quot; id=&quot;population-instance_method&quot;&gt;
1630
-
1631
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;population&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1632
-
1633
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1634
-
1635
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1636
-
1637
- <p>&lt;p&gt;population object and class specification&lt;/p&gt;</p>
1638
-
1639
- <pre>&lt;/div&gt;</pre>
1640
-
1641
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1642
-
1643
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1644
-
1645
- <pre>&lt;tr&gt;
1646
- &lt;td&gt;
1647
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1648
-
1649
- <p>173 174 175&lt;/pre&gt;</p>
1650
-
1651
- <pre>&lt;/td&gt;
1652
- &lt;td&gt;
1653
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 173&lt;/span&gt;</pre>
1654
-
1655
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1656
- identifier rubyid_population&#39;&gt;population&lt;/span&gt;</p>
1657
-
1658
- <pre>&lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;</pre>
1659
-
1660
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1661
-
1662
- <pre> &lt;/td&gt;
1663
- &lt;/tr&gt;</pre>
1664
-
1665
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1666
-
1667
- <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1668
- &lt;div class=&quot;method_details &quot;&gt;
1669
- &lt;h3 class=&quot;signature &quot; id=&quot;population_class-instance_method&quot;&gt;
1670
-
1671
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;population_class&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1672
-
1673
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1674
-
1675
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1676
-
1677
- <p>&lt;p&gt;population object and class specification&lt;/p&gt;</p>
1678
-
1679
- <pre>&lt;/div&gt;</pre>
1680
-
1681
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1682
-
1683
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1684
-
1685
- <pre>&lt;tr&gt;
1686
- &lt;td&gt;
1687
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1688
-
1689
- <p>173 174 175&lt;/pre&gt;</p>
1690
-
1691
- <pre>&lt;/td&gt;
1692
- &lt;td&gt;
1693
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 173&lt;/span&gt;</pre>
1694
-
1695
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1696
- identifier rubyid_population_class&#39;&gt;population_class&lt;/span&gt;</p>
1697
-
1698
- <pre>&lt;span class=&#39;ivar&#39;&gt;@population_class&lt;/span&gt;</pre>
1699
-
1700
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1701
-
1702
- <pre> &lt;/td&gt;
1703
- &lt;/tr&gt;</pre>
1704
-
1705
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1706
-
1707
- <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1708
- &lt;div class=&quot;method_details &quot;&gt;
1709
- &lt;h3 class=&quot;signature &quot; id=&quot;population_history-instance_method&quot;&gt;
1710
-
1711
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;population_history&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1712
-
1713
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1714
-
1715
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1716
-
1717
- <p>&lt;p&gt;population object and class specification&lt;/p&gt;</p>
1718
-
1719
- <pre>&lt;/div&gt;</pre>
1720
-
1721
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1722
-
1723
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1724
-
1725
- <pre>&lt;tr&gt;
1726
- &lt;td&gt;
1727
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1728
-
1729
- <p>173 174 175&lt;/pre&gt;</p>
1730
-
1731
- <pre>&lt;/td&gt;
1732
- &lt;td&gt;
1733
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 173&lt;/span&gt;</pre>
1734
-
1735
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1736
- identifier
1737
- rubyid_population_history&#39;&gt;population_history&lt;/span&gt;</p>
1738
-
1739
- <pre>&lt;span class=&#39;ivar&#39;&gt;@population_history&lt;/span&gt;</pre>
1740
-
1741
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1742
-
1743
- <pre> &lt;/td&gt;
1744
- &lt;/tr&gt;</pre>
1745
-
1746
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1747
-
1748
- <pre> &lt;span id=&quot;query_func=-instance_method&quot;&gt;&lt;/span&gt;
1749
- &lt;div class=&quot;method_details &quot;&gt;
1750
- &lt;h3 class=&quot;signature &quot; id=&quot;query_func-instance_method&quot;&gt;
1751
-
1752
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;query_func&lt;/strong&gt;</pre>
1753
-
1754
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1755
-
1756
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1757
-
1758
- <p>&lt;p&gt;Query function that Critters shall call.&lt;/p&gt;</p>
1759
-
1760
- <pre>&lt;/div&gt;</pre>
1761
-
1762
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1763
-
1764
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1765
-
1766
- <pre>&lt;tr&gt;
1767
- &lt;td&gt;
1768
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1769
-
1770
- <p>187 188 189&lt;/pre&gt;</p>
1771
-
1772
- <pre>&lt;/td&gt;
1773
- &lt;td&gt;
1774
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 187&lt;/span&gt;</pre>
1775
-
1776
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1777
- identifier rubyid_query_func&#39;&gt;query_func&lt;/span&gt;</p>
1778
-
1779
- <pre>&lt;span class=&#39;ivar&#39;&gt;@query_func&lt;/span&gt;</pre>
1780
-
1781
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1782
-
1783
- <pre> &lt;/td&gt;
1784
- &lt;/tr&gt;</pre>
1785
-
1786
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1787
-
1788
- <pre> &lt;span id=&quot;recurrence_func=-instance_method&quot;&gt;&lt;/span&gt;
1789
- &lt;div class=&quot;method_details &quot;&gt;
1790
- &lt;h3 class=&quot;signature &quot; id=&quot;recurrence_func-instance_method&quot;&gt;
1791
-
1792
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;recurrence_func&lt;/strong&gt;</pre>
1793
-
1794
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1795
-
1796
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1797
-
1798
- <p>&lt;p&gt;Recurrence function that Critters will yield to.&lt;/p&gt;</p>
1799
-
1800
- <pre>&lt;/div&gt;</pre>
1801
-
1802
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1803
-
1804
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1805
-
1806
- <pre>&lt;tr&gt;
1807
- &lt;td&gt;
1808
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1809
-
1810
- <p>193 194 195&lt;/pre&gt;</p>
1811
-
1812
- <pre>&lt;/td&gt;
1813
- &lt;td&gt;
1814
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 193&lt;/span&gt;</pre>
1815
-
1816
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1817
- identifier rubyid_recurrence_func&#39;&gt;recurrence_func&lt;/span&gt;</p>
1818
-
1819
- <pre>&lt;span class=&#39;ivar&#39;&gt;@recurrence_func&lt;/span&gt;</pre>
1820
-
1821
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1822
-
1823
- <pre> &lt;/td&gt;
1824
- &lt;/tr&gt;</pre>
1825
-
1826
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1827
-
1828
- <pre> &lt;span id=&quot;report_hook=-instance_method&quot;&gt;&lt;/span&gt;
1829
- &lt;div class=&quot;method_details &quot;&gt;
1830
- &lt;h3 class=&quot;signature &quot; id=&quot;report_hook-instance_method&quot;&gt;
1831
-
1832
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;report_hook&lt;/strong&gt;</pre>
1833
-
1834
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1835
-
1836
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1837
-
1838
- <p>&lt;p&gt;End run function to call at the end of each generational run Also
1839
- report_hook to dump reports for the user, etc.&lt;/p&gt;</p>
1840
-
1841
- <pre>&lt;/div&gt;</pre>
1842
-
1843
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1844
-
1845
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1846
-
1847
- <pre>&lt;tr&gt;
1848
- &lt;td&gt;
1849
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1850
-
1851
- <p>201 202 203&lt;/pre&gt;</p>
1852
-
1853
- <pre>&lt;/td&gt;
1854
- &lt;td&gt;
1855
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 201&lt;/span&gt;</pre>
1856
-
1857
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1858
- identifier rubyid_report_hook&#39;&gt;report_hook&lt;/span&gt;</p>
1859
-
1860
- <pre>&lt;span class=&#39;ivar&#39;&gt;@report_hook&lt;/span&gt;</pre>
1861
-
1862
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1863
-
1864
- <pre> &lt;/td&gt;
1865
- &lt;/tr&gt;</pre>
1866
-
1867
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1868
-
1869
- <pre> &lt;span id=&quot;&quot;&gt;&lt;/span&gt;
1870
- &lt;div class=&quot;method_details &quot;&gt;
1871
- &lt;h3 class=&quot;signature &quot; id=&quot;seq_num-instance_method&quot;&gt;
1872
-
1873
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;seq_num&lt;/strong&gt; &lt;span class=&quot;extras&quot;&gt;(readonly)&lt;/span&gt;</pre>
1874
-
1875
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1876
-
1877
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1878
-
1879
- <p>&lt;p&gt;current sequence number being evaluated&lt;/p&gt;</p>
1880
-
1881
- <pre>&lt;/div&gt;</pre>
1882
-
1883
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1884
-
1885
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1886
-
1887
- <pre>&lt;tr&gt;
1888
- &lt;td&gt;
1889
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1890
-
1891
- <p>157 158 159&lt;/pre&gt;</p>
1892
-
1893
- <pre>&lt;/td&gt;
1894
- &lt;td&gt;
1895
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 157&lt;/span&gt;</pre>
1896
-
1897
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1898
- identifier rubyid_seq_num&#39;&gt;seq_num&lt;/span&gt;</p>
1899
-
1900
- <pre>&lt;span class=&#39;ivar&#39;&gt;@seq_num&lt;/span&gt;</pre>
1901
-
1902
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1903
-
1904
- <pre> &lt;/td&gt;
1905
- &lt;/tr&gt;</pre>
1906
-
1907
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1908
-
1909
- <pre> &lt;span id=&quot;stop_on_fit_func=-instance_method&quot;&gt;&lt;/span&gt;
1910
- &lt;div class=&quot;method_details &quot;&gt;
1911
- &lt;h3 class=&quot;signature &quot; id=&quot;stop_on_fit_func-instance_method&quot;&gt;
1912
-
1913
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;stop_on_fit_func&lt;/strong&gt;</pre>
1914
-
1915
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1916
-
1917
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1918
-
1919
- <p>&lt;p&gt;Compare function for fitness Cost function for integrating in the
1920
- cost to the fitness scalar.&lt;/p&gt;</p>
1921
-
1922
- <pre>&lt;/div&gt;</pre>
1923
-
1924
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1925
-
1926
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1927
-
1928
- <pre>&lt;tr&gt;
1929
- &lt;td&gt;
1930
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1931
-
1932
- <p>197 198 199&lt;/pre&gt;</p>
1933
-
1934
- <pre>&lt;/td&gt;
1935
- &lt;td&gt;
1936
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 197&lt;/span&gt;</pre>
1937
-
1938
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1939
- identifier rubyid_stop_on_fit_func&#39;&gt;stop_on_fit_func&lt;/span&gt;</p>
1940
-
1941
- <pre>&lt;span class=&#39;ivar&#39;&gt;@stop_on_fit_func&lt;/span&gt;</pre>
1942
-
1943
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1944
-
1945
- <pre> &lt;/td&gt;
1946
- &lt;/tr&gt;</pre>
1947
-
1948
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1949
-
1950
- <pre> &lt;span id=&quot;verbosity=-instance_method&quot;&gt;&lt;/span&gt;
1951
- &lt;div class=&quot;method_details &quot;&gt;
1952
- &lt;h3 class=&quot;signature &quot; id=&quot;verbosity-instance_method&quot;&gt;
1953
-
1954
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;verbosity&lt;/strong&gt;</pre>
1955
-
1956
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
1957
-
1958
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
1959
-
1960
- <p>&lt;p&gt;Global verbosity level: 1 - normal (the default) 2 - really
1961
- verbose 3 - maximally verbose Use in conjunction with log.debug&lt;/p&gt;</p>
1962
-
1963
- <pre>&lt;/div&gt;</pre>
1964
-
1965
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
1966
-
1967
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
1968
-
1969
- <pre>&lt;tr&gt;
1970
- &lt;td&gt;
1971
- &lt;pre class=&quot;lines&quot;&gt;</pre>
1972
-
1973
- <p>184 185 186&lt;/pre&gt;</p>
1974
-
1975
- <pre>&lt;/td&gt;
1976
- &lt;td&gt;
1977
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 184&lt;/span&gt;</pre>
1978
-
1979
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
1980
- identifier rubyid_verbosity&#39;&gt;verbosity&lt;/span&gt;</p>
1981
-
1982
- <pre>&lt;span class=&#39;ivar&#39;&gt;@verbosity&lt;/span&gt;</pre>
1983
-
1984
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
1985
-
1986
- <pre> &lt;/td&gt;
1987
- &lt;/tr&gt;</pre>
1988
-
1989
- <p>&lt;/table&gt; &lt;/div&gt;</p>
1990
-
1991
- <pre>&lt;/div&gt;
1992
-
1993
- &lt;div id=&quot;instance_method_details&quot; class=&quot;method_details_list&quot;&gt;
1994
- &lt;h2&gt;Instance Method Details&lt;/h2&gt;
1995
-
1996
- &lt;div class=&quot;method_details first&quot;&gt;
1997
- &lt;h3 class=&quot;signature first&quot; id=&quot;gaussian-instance_method&quot;&gt;
1998
-
1999
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;gaussian&lt;/strong&gt;</pre>
2000
-
2001
- <p>&lt;/h3&gt;&lt;table class=“source_code”&gt;</p>
2002
-
2003
- <pre>&lt;tr&gt;
2004
- &lt;td&gt;
2005
- &lt;pre class=&quot;lines&quot;&gt;</pre>
2006
-
2007
- <p>368&lt;/pre&gt;</p>
2008
-
2009
- <pre>&lt;/td&gt;
2010
- &lt;td&gt;
2011
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 368&lt;/span&gt;</pre>
2012
-
2013
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
2014
- identifier rubyid_gaussian&#39;&gt;gaussian&lt;/span&gt; &lt;span
2015
- class=&#39;semicolon&#39;&gt;;&lt;/span&gt; &lt;span
2016
- class=&#39;ivar&#39;&gt;@gaussian&lt;/span&gt;&lt;span
2017
- class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span
2018
- class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span
2019
- class=&#39;rparen&#39;&gt;)&lt;/span&gt; &lt;span
2020
- class=&#39;semicolon&#39;&gt;;&lt;/span&gt; &lt;span
2021
- class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
2022
-
2023
- <pre> &lt;/td&gt;
2024
- &lt;/tr&gt;</pre>
2025
-
2026
- <p>&lt;/table&gt; &lt;/div&gt;</p>
2027
-
2028
- <pre> &lt;div class=&quot;method_details &quot;&gt;
2029
- &lt;h3 class=&quot;signature &quot; id=&quot;new_innovation-instance_method&quot;&gt;
2030
-
2031
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;new_innovation&lt;/strong&gt;</pre>
2032
-
2033
- <p>&lt;/h3&gt;&lt;table class=“source_code”&gt;</p>
2034
-
2035
- <pre>&lt;tr&gt;
2036
- &lt;td&gt;
2037
- &lt;pre class=&quot;lines&quot;&gt;</pre>
2038
-
2039
- <p>367&lt;/pre&gt;</p>
2040
-
2041
- <pre>&lt;/td&gt;
2042
- &lt;td&gt;
2043
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 367&lt;/span&gt;</pre>
2044
-
2045
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
2046
- identifier rubyid_new_innovation&#39;&gt;new_innovation&lt;/span&gt;
2047
- &lt;span class=&#39;semicolon&#39;&gt;;&lt;/span&gt; &lt;span
2048
- class=&#39;ivar&#39;&gt;@glob_innov_num&lt;/span&gt; &lt;span
2049
- class=&#39;op&#39;&gt;+=&lt;/span&gt; &lt;span
2050
- class=&#39;int&#39;&gt;1&lt;/span&gt;&lt;span
2051
- class=&#39;semicolon&#39;&gt;;&lt;/span&gt; &lt;span
2052
- class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
2053
-
2054
- <pre> &lt;/td&gt;
2055
- &lt;/tr&gt;</pre>
2056
-
2057
- <p>&lt;/table&gt; &lt;/div&gt;</p>
2058
-
2059
- <pre> &lt;div class=&quot;method_details &quot;&gt;
2060
- &lt;h3 class=&quot;signature &quot; id=&quot;run-instance_method&quot;&gt;
2061
-
2062
- - (&lt;tt&gt;Object&lt;/tt&gt;) &lt;strong&gt;run&lt;/strong&gt;</pre>
2063
-
2064
- <p>&lt;/h3&gt;&lt;div class=“docstring”&gt;</p>
2065
-
2066
- <pre>&lt;div class=&quot;discussion&quot;&gt;</pre>
2067
-
2068
- <p>&lt;p&gt;Run this evolution.&lt;/p&gt;</p>
2069
-
2070
- <pre>&lt;/div&gt;</pre>
2071
-
2072
- <p>&lt;/div&gt; &lt;div class=“tags”&gt;</p>
2073
-
2074
- <p>&lt;/div&gt;&lt;table class=“source_code”&gt;</p>
2075
-
2076
- <pre>&lt;tr&gt;
2077
- &lt;td&gt;
2078
- &lt;pre class=&quot;lines&quot;&gt;</pre>
2079
-
2080
- <p>371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389
2081
- 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408
2082
- 409 410 411&lt;/pre&gt;</p>
2083
-
2084
- <pre>&lt;/td&gt;
2085
- &lt;td&gt;
2086
- &lt;pre class=&quot;code&quot;&gt;&lt;span class=&quot;info file&quot;&gt;# File &#39;lib/rubyneat/rubyneat.rb&#39;, line 371&lt;/span&gt;</pre>
2087
-
2088
- <p>&lt;span class=&#39;kw&#39;&gt;def&lt;/span&gt; &lt;span class=&#39;id
2089
- identifier rubyid_run&#39;&gt;run&lt;/span&gt;</p>
2090
-
2091
- <pre>&lt;span class=&#39;id identifier rubyid_pre_run_initialize&#39;&gt;pre_run_initialize&lt;/span&gt;
2092
- &lt;span class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;int&#39;&gt;1&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;..&lt;/span&gt;&lt;span class=&#39;ivar&#39;&gt;@parms&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_max_generations&#39;&gt;max_generations&lt;/span&gt;&lt;span class=&#39;rparen&#39;&gt;)&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_each&#39;&gt;each&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;do&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_gen_number&#39;&gt;gen_number&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;
2093
- &lt;span class=&#39;ivar&#39;&gt;@generation_num&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_gen_number&#39;&gt;gen_number&lt;/span&gt;
2094
- &lt;span class=&#39;ivar&#39;&gt;@population_history&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;&amp;lt;&amp;lt;&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_nil?&#39;&gt;nil?&lt;/span&gt;
2095
- &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;
2096
- &lt;span class=&#39;kw&#39;&gt;else&lt;/span&gt;
2097
- &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@population_class&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_new&#39;&gt;new&lt;/span&gt;&lt;span class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;kw&#39;&gt;self&lt;/span&gt;&lt;span class=&#39;rparen&#39;&gt;)&lt;/span&gt;
2098
- &lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;
2099
- &lt;span class=&#39;ivar&#39;&gt;@population_history&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_shift&#39;&gt;shift&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@population_history&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_size&#39;&gt;size&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;&amp;lt;=&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@parms&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_max_population_history&#39;&gt;max_population_history&lt;/span&gt;
2100
- &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_mutate!&#39;&gt;mutate!&lt;/span&gt;
2101
- &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_express!&#39;&gt;express!&lt;/span&gt;
2102
-
2103
- &lt;span class=&#39;comment&#39;&gt;## Evaluate population</pre>
2104
-
2105
- <p>&lt;/span&gt; &lt;span
2106
- class=&#39;ivar&#39;&gt;@evaluator&lt;/span&gt;&lt;span
2107
- class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
2108
- rubyid_ready_for_evaluation&#39;&gt;ready_for_evaluation&lt;/span&gt;
2109
- &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;</p>
2110
-
2111
- <pre>&lt;span class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span class=&#39;ivar&#39;&gt;@parms&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_start_sequence_at&#39;&gt;start_sequence_at&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;..&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@parms&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_end_sequence_at&#39;&gt;end_sequence_at&lt;/span&gt;&lt;span class=&#39;rparen&#39;&gt;)&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_each&#39;&gt;each&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;do&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_snum&#39;&gt;snum&lt;/span&gt;&lt;span class=&#39;op&#39;&gt;|&lt;/span&gt;
2112
- &lt;span class=&#39;ivar&#39;&gt;@seq_num&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id identifier rubyid_snum&#39;&gt;snum&lt;/span&gt;
2113
- &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_evaluate!&#39;&gt;evaluate!&lt;/span&gt;
2114
- &lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;
2115
-
2116
- &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_analyze!&#39;&gt;analyze!&lt;/span&gt;
2117
- &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_speciate!&#39;&gt;speciate!&lt;/span&gt;
2118
-
2119
- &lt;span class=&#39;gvar&#39;&gt;$log&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_debug&#39;&gt;debug&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_dump_s&#39;&gt;dump_s&lt;/span&gt; &lt;span class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@verbosity&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;&amp;lt;&lt;/span&gt; &lt;span class=&#39;int&#39;&gt;3&lt;/span&gt;
2120
-
2121
- &lt;span class=&#39;id identifier rubyid_new_pop&#39;&gt;new_pop&lt;/span&gt; &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier rubyid_evolve&#39;&gt;evolve&lt;/span&gt;
2122
-
2123
- &lt;span class=&#39;comment&#39;&gt;## Report hook for evaluation</pre>
2124
-
2125
- <p>&lt;/span&gt; &lt;span
2126
- class=&#39;ivar&#39;&gt;@report_hook&lt;/span&gt;&lt;span
2127
- class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span
2128
- class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span
2129
- class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span
2130
- class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
2131
- rubyid_report&#39;&gt;report&lt;/span&gt;&lt;span
2132
- class=&#39;rparen&#39;&gt;)&lt;/span&gt; &lt;span
2133
- class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span
2134
- class=&#39;ivar&#39;&gt;@report_hook&lt;/span&gt;&lt;span
2135
- class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
2136
- rubyid_nil?&#39;&gt;nil?&lt;/span&gt;</p>
2137
-
2138
- <pre>&lt;span class=&#39;comment&#39;&gt;## Exit if fitness criteria is reached</pre>
2139
-
2140
- <p>&lt;/span&gt; &lt;span class=&#39;comment&#39;&gt;#FIXME handle this
2141
- exit condition better!!!!! &lt;/span&gt; &lt;span class=&#39;id
2142
- identifier rubyid_exit&#39;&gt;exit&lt;/span&gt; &lt;span
2143
- class=&#39;kw&#39;&gt;if&lt;/span&gt; &lt;span
2144
- class=&#39;ivar&#39;&gt;@stop_on_fit_func&lt;/span&gt;&lt;span
2145
- class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span
2146
- class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span
2147
- class=&#39;ivar&#39;&gt;@population&lt;/span&gt;&lt;span
2148
- class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
2149
- rubyid_report&#39;&gt;report&lt;/span&gt;&lt;span
2150
- class=&#39;lbracket&#39;&gt;[&lt;/span&gt;&lt;span
2151
- class=&#39;symbol&#39;&gt;:fitness&lt;/span&gt;&lt;span
2152
- class=&#39;rbracket&#39;&gt;]&lt;/span&gt;&lt;span
2153
- class=&#39;comma&#39;&gt;,&lt;/span&gt; &lt;span
2154
- class=&#39;kw&#39;&gt;self&lt;/span&gt;&lt;span
2155
- class=&#39;rparen&#39;&gt;)&lt;/span&gt; &lt;span
2156
- class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span
2157
- class=&#39;ivar&#39;&gt;@stop_on_fit_func&lt;/span&gt;&lt;span
2158
- class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
2159
- rubyid_nil?&#39;&gt;nil?&lt;/span&gt;</p>
2160
-
2161
- <pre>&lt;span class=&#39;comment&#39;&gt;## Evolve population</pre>
2162
-
2163
- <p>&lt;/span&gt; &lt;span class=&#39;ivar&#39;&gt;@population&lt;/span&gt;
2164
- &lt;span class=&#39;op&#39;&gt;=&lt;/span&gt; &lt;span class=&#39;id
2165
- identifier rubyid_new_pop&#39;&gt;new_pop&lt;/span&gt;</p>
2166
-
2167
- <pre>&lt;span class=&#39;comment&#39;&gt;## Finish up this run</pre>
2168
-
2169
- <p>&lt;/span&gt; &lt;span
2170
- class=&#39;ivar&#39;&gt;@end_run_func&lt;/span&gt;&lt;span
2171
- class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span
2172
- class=&#39;lparen&#39;&gt;(&lt;/span&gt;&lt;span
2173
- class=&#39;kw&#39;&gt;self&lt;/span&gt;&lt;span
2174
- class=&#39;rparen&#39;&gt;)&lt;/span&gt; &lt;span
2175
- class=&#39;kw&#39;&gt;unless&lt;/span&gt; &lt;span
2176
- class=&#39;ivar&#39;&gt;@end_run_func&lt;/span&gt;&lt;span
2177
- class=&#39;period&#39;&gt;.&lt;/span&gt;&lt;span class=&#39;id identifier
2178
- rubyid_nil?&#39;&gt;nil?&lt;/span&gt;</p>
2179
-
2180
- <pre>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;</pre>
2181
-
2182
- <p>&lt;span class=&#39;kw&#39;&gt;end&lt;/span&gt;&lt;/pre&gt;</p>
2183
-
2184
- <pre> &lt;/td&gt;
2185
- &lt;/tr&gt;</pre>
2186
-
2187
- <p>&lt;/table&gt; &lt;/div&gt;</p>
2188
-
2189
- <pre>&lt;/div&gt;</pre>
2190
-
2191
- <p>&lt;/div&gt;</p>
2192
-
2193
- <pre> &lt;div id=&quot;footer&quot;&gt;
2194
- Generated on Sun Mar 16 16:36:52 2014 by
2195
- &lt;a href=&quot;http://yardoc.org&quot; title=&quot;Yay! A Ruby Documentation Tool&quot; target=&quot;_parent&quot;&gt;yard&lt;/a&gt;
2196
- 0.8.7.3 (ruby-2.1.1).</pre>
2197
-
2198
- <p>&lt;/div&gt;</p>
2199
-
2200
- <pre>&lt;/body&gt;</pre>
2201
-
2202
- <p>&lt;/html&gt;</p>
2203
- </main>
2204
-
2205
-
2206
-
2207
- <footer id="validator-badges" role="contentinfo">
2208
- <p><a href="http://validator.w3.org/check/referer">Validate</a>
2209
- <p>Generated by <a href="http://rdoc.rubyforge.org">RDoc</a> 4.1.1.
2210
- <p>Based on <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish</a> by <a href="http://deveiate.org">Michael Granger</a>.
2211
- </footer>
2212
-