rubyneat 0.3.5.alpha.3 → 0.3.5.alpha.5
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- checksums.yaml +4 -4
- data/.semver +1 -1
- data/Gemfile +19 -19
- data/Gemfile.lock +39 -33
- data/README.md +66 -0
- data/Rakefile +19 -2
- data/bin/neat +4 -60
- data/lib/rubyneat/cli.rb +5 -0
- data/lib/rubyneat/cli/generate.rb +131 -0
- data/lib/rubyneat/cli/main.rb +54 -0
- data/lib/rubyneat/cli/templates/generate/Gemfile.tt +17 -0
- data/lib/rubyneat/cli/templates/generate/README.md.tt +1 -0
- data/lib/rubyneat/cli/templates/generate/bin/neat.tt +14 -0
- data/{neater/xor_neat.rb → lib/rubyneat/cli/templates/generate/neater.tt} +7 -22
- data/rubyneat.gemspec +73 -297
- data/rubyneat.gemspec.orig +384 -0
- metadata +76 -292
- data/.idea/.name +0 -1
- data/.idea/.rakeTasks +0 -7
- data/.idea/dictionaries/trader.xml +0 -3
- data/.idea/encodings.xml +0 -5
- data/.idea/misc.xml +0 -5
- data/.idea/modules.xml +0 -9
- data/.idea/rubyneat.iml +0 -198
- data/.idea/runConfigurations/invpend_neat.xml +0 -26
- data/.idea/runConfigurations/sigdebug_neat.xml +0 -24
- data/.idea/runConfigurations/xor_neat.xml +0 -26
- data/.idea/runConfigurations/xordebug_neat.xml +0 -24
- data/.idea/runConfigurations/xorsin_neat.xml +0 -24
- data/.idea/scopes/scope_settings.xml +0 -5
- data/.idea/vcs.xml +0 -7
- data/.idea/workspace.xml +0 -1151
- data/.yardoc/checksums +0 -11
- data/.yardoc/object_types +0 -0
- data/.yardoc/objects/root.dat +0 -0
- data/.yardoc/proxy_types +0 -0
- data/Guardfile +0 -8
- data/doc/ControllerPoint.html +0 -125
- data/doc/CuteA.html +0 -286
- data/doc/CuteB.html +0 -297
- data/doc/DSL.html +0 -883
- data/doc/NEAT.html +0 -588
- data/doc/NEAT/BasicNeuronTypes.html +0 -136
- data/doc/NEAT/BasicNeuronTypes/BiasNeuron.html +0 -518
- data/doc/NEAT/BasicNeuronTypes/CosineNeuron.html +0 -274
- data/doc/NEAT/BasicNeuronTypes/InputNeuron.html +0 -366
- data/doc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +0 -275
- data/doc/NEAT/BasicNeuronTypes/SineNeuron.html +0 -274
- data/doc/NEAT/BasicNeuronTypes/TanhNeuron.html +0 -274
- data/doc/NEAT/Controller.html +0 -2490
- data/doc/NEAT/Controller/NeatSettings.html +0 -3985
- data/doc/NEAT/Critter.html +0 -1037
- data/doc/NEAT/Critter/Genotype.html +0 -1601
- data/doc/NEAT/Critter/Genotype/Gene.html +0 -979
- data/doc/NEAT/Critter/Phenotype.html +0 -603
- data/doc/NEAT/DSL.html +0 -1255
- data/doc/NEAT/Evaluator.html +0 -420
- data/doc/NEAT/Evolver.html +0 -602
- data/doc/NEAT/Evolver/CritterOp.html +0 -551
- data/doc/NEAT/Expressor.html +0 -327
- data/doc/NEAT/Graph.html +0 -402
- data/doc/NEAT/Graph/DependencyResolver.html +0 -478
- data/doc/NEAT/Graph/GraphException.html +0 -123
- data/doc/NEAT/NeatException.html +0 -123
- data/doc/NEAT/NeatOb.html +0 -567
- data/doc/NEAT/Neuron.html +0 -1067
- data/doc/NEAT/Operator.html +0 -162
- data/doc/NEAT/Population.html +0 -1961
- data/doc/NEAT/Trait.html +0 -169
- data/doc/_index.html +0 -373
- data/doc/class_list.html +0 -54
- data/doc/css/common.css +0 -1
- data/doc/css/full_list.css +0 -57
- data/doc/css/style.css +0 -339
- data/doc/file_list.html +0 -53
- data/doc/frames.html +0 -26
- data/doc/index.html +0 -373
- data/doc/js/app.js +0 -219
- data/doc/js/full_list.js +0 -178
- data/doc/js/jquery.js +0 -4
- data/doc/method_list.html +0 -1415
- data/doc/top-level-namespace.html +0 -164
- data/foo/foo_aquarium_example.rb +0 -38
- data/foo/foo_gosu.rb +0 -99
- data/foo/foo_rubygoo.rb +0 -104
- data/foo/foo_sdl.rb +0 -34
- data/foo/icon.png +0 -0
- data/neater/invpend_neat.rb +0 -150
- data/neater/rnlib/inverted_pendulum.rb +0 -380
- data/neater/rnlib/xor.rb +0 -10
- data/neater/sigdebug_neat.rb +0 -136
- data/neater/xoranalog_neat.rb +0 -138
- data/neater/xorsin_neat.rb +0 -143
- data/projectFilesBackup/.idea/rubyneat.iml +0 -180
- data/public/.directory +0 -4
- data/public/background.png +0 -0
- data/public/background.xcf +0 -0
- data/public/cart.png +0 -0
- data/public/cart.xcf +0 -0
- data/public/metalpoles_molton_ball_l.jpg +0 -0
- data/public/old_background.png +0 -0
- data/public/pointer.png +0 -0
- data/public/pointer.xcf +0 -0
- data/public/pole.kra +0 -0
- data/public/pole.png +0 -0
- data/public/pole.xcf +0 -0
- data/public/wheel-of-year-stone-DD-131-WOYS.jpg +0 -0
- data/public/wheel.png +0 -0
- data/public/wheel.xcf +0 -0
- data/public/wood-planks-texture.jpg +0 -0
- data/rdoc/ControllerPoint.html +0 -116
- data/rdoc/CuteA.html +0 -177
- data/rdoc/CuteB.html +0 -178
- data/rdoc/DSLSetup.html +0 -177
- data/rdoc/GameTestWindow.html +0 -242
- data/rdoc/GameWindow.html +0 -292
- data/rdoc/Gemfile.html +0 -215
- data/rdoc/Gemfile_lock.html +0 -327
- data/rdoc/GraphTest.html +0 -210
- data/rdoc/Guardfile.html +0 -198
- data/rdoc/InvertedPendulum.html +0 -198
- data/rdoc/InvertedPendulum/Cart.html +0 -668
- data/rdoc/InvertedPendulum/DSL.html +0 -259
- data/rdoc/InvertedPendulum/InvPendWindow.html +0 -402
- data/rdoc/Logger.html +0 -98
- data/rdoc/NEAT.html +0 -422
- data/rdoc/NEAT/BasicNeuronTypes.html +0 -107
- data/rdoc/NEAT/BasicNeuronTypes/BiasNeuron.html +0 -265
- data/rdoc/NEAT/BasicNeuronTypes/CosineNeuron.html +0 -162
- data/rdoc/NEAT/BasicNeuronTypes/InputNeuron.html +0 -206
- data/rdoc/NEAT/BasicNeuronTypes/SigmoidNeuron.html +0 -162
- data/rdoc/NEAT/BasicNeuronTypes/SineNeuron.html +0 -162
- data/rdoc/NEAT/BasicNeuronTypes/TanhNeuron.html +0 -161
- data/rdoc/NEAT/Controller.html +0 -729
- data/rdoc/NEAT/Controller/NeatSettings.html +0 -880
- data/rdoc/NEAT/Critter.html +0 -489
- data/rdoc/NEAT/Critter/Genotype.html +0 -735
- data/rdoc/NEAT/Critter/Genotype/Gene.html +0 -457
- data/rdoc/NEAT/Critter/Phenotype.html +0 -330
- data/rdoc/NEAT/DSL.html +0 -729
- data/rdoc/NEAT/Evaluator.html +0 -256
- data/rdoc/NEAT/Evolver.html +0 -891
- data/rdoc/NEAT/Evolver/CritterOp.html +0 -349
- data/rdoc/NEAT/Expressor.html +0 -402
- data/rdoc/NEAT/Graph.html +0 -263
- data/rdoc/NEAT/Graph/DependencyResolver.html +0 -291
- data/rdoc/NEAT/Graph/GraphException.html +0 -105
- data/rdoc/NEAT/NeatException.html +0 -105
- data/rdoc/NEAT/NeatOb.html +0 -325
- data/rdoc/NEAT/Neuron.html +0 -481
- data/rdoc/NEAT/Operator.html +0 -109
- data/rdoc/NEAT/Population.html +0 -935
- data/rdoc/NEAT/Trait.html +0 -117
- data/rdoc/Object.html +0 -384
- data/rdoc/Phi.html +0 -98
- data/rdoc/Player.html +0 -383
- data/rdoc/Rakefile.html +0 -254
- data/rdoc/RubyNEAT.html +0 -98
- data/rdoc/RubyNEAT/Application.html +0 -105
- data/rdoc/SDL.html +0 -98
- data/rdoc/SDL/Event2.html +0 -98
- data/rdoc/Vector.html +0 -195
- data/rdoc/created.rid +0 -125
- data/rdoc/doc/ControllerPoint_html.html +0 -299
- data/rdoc/doc/CuteA_html.html +0 -438
- data/rdoc/doc/CuteB_html.html +0 -436
- data/rdoc/doc/DSL_html.html +0 -992
- data/rdoc/doc/NEAT/BasicNeuronTypes/BiasNeuron_html.html +0 -617
- data/rdoc/doc/NEAT/BasicNeuronTypes/CosineNeuron_html.html +0 -413
- data/rdoc/doc/NEAT/BasicNeuronTypes/InputNeuron_html.html +0 -498
- data/rdoc/doc/NEAT/BasicNeuronTypes/SigmoidNeuron_html.html +0 -413
- data/rdoc/doc/NEAT/BasicNeuronTypes/SineNeuron_html.html +0 -413
- data/rdoc/doc/NEAT/BasicNeuronTypes/TanhNeuron_html.html +0 -412
- data/rdoc/doc/NEAT/BasicNeuronTypes_html.html +0 -310
- data/rdoc/doc/NEAT/Controller/NeatSettings_html.html +0 -3324
- data/rdoc/doc/NEAT/Controller_html.html +0 -2212
- data/rdoc/doc/NEAT/Critter/Genotype/Gene_html.html +0 -997
- data/rdoc/doc/NEAT/Critter/Genotype_html.html +0 -1556
- data/rdoc/doc/NEAT/Critter/Phenotype_html.html +0 -687
- data/rdoc/doc/NEAT/Critter_html.html +0 -1037
- data/rdoc/doc/NEAT/DSL_html.html +0 -1349
- data/rdoc/doc/NEAT/Evaluator_html.html +0 -556
- data/rdoc/doc/NEAT/Evolver/CritterOp_html.html +0 -690
- data/rdoc/doc/NEAT/Evolver_html.html +0 -677
- data/rdoc/doc/NEAT/Expressor_html.html +0 -468
- data/rdoc/doc/NEAT/Graph/DependencyResolver_html.html +0 -598
- data/rdoc/doc/NEAT/Graph/GraphException_html.html +0 -299
- data/rdoc/doc/NEAT/Graph_html.html +0 -527
- data/rdoc/doc/NEAT/NeatException_html.html +0 -299
- data/rdoc/doc/NEAT/NeatOb_html.html +0 -671
- data/rdoc/doc/NEAT/Neuron_html.html +0 -1095
- data/rdoc/doc/NEAT/Operator_html.html +0 -337
- data/rdoc/doc/NEAT/Population_html.html +0 -1795
- data/rdoc/doc/NEAT/Trait_html.html +0 -344
- data/rdoc/doc/NEAT_html.html +0 -736
- data/rdoc/doc/_index_html.html +0 -559
- data/rdoc/doc/class_list_html.html +0 -369
- data/rdoc/doc/css/common_css.html +0 -188
- data/rdoc/doc/css/full_list_css.html +0 -243
- data/rdoc/doc/css/style_css.html +0 -530
- data/rdoc/doc/file_list_html.html +0 -240
- data/rdoc/doc/frames_html.html +0 -217
- data/rdoc/doc/index_html.html +0 -559
- data/rdoc/doc/js/app_js.html +0 -423
- data/rdoc/doc/js/full_list_js.html +0 -372
- data/rdoc/doc/js/jquery_js.html +0 -1536
- data/rdoc/doc/method_list_html.html +0 -1375
- data/rdoc/doc/top-level-namespace_html.html +0 -317
- data/rdoc/fonts.css +0 -167
- data/rdoc/fonts/Lato-Light.ttf +0 -0
- data/rdoc/fonts/Lato-LightItalic.ttf +0 -0
- data/rdoc/fonts/Lato-Regular.ttf +0 -0
- data/rdoc/fonts/Lato-RegularItalic.ttf +0 -0
- data/rdoc/fonts/SourceCodePro-Bold.ttf +0 -0
- data/rdoc/fonts/SourceCodePro-Regular.ttf +0 -0
- data/rdoc/images/add.png +0 -0
- data/rdoc/images/arrow_up.png +0 -0
- data/rdoc/images/brick.png +0 -0
- data/rdoc/images/brick_link.png +0 -0
- data/rdoc/images/bug.png +0 -0
- data/rdoc/images/bullet_black.png +0 -0
- data/rdoc/images/bullet_toggle_minus.png +0 -0
- data/rdoc/images/bullet_toggle_plus.png +0 -0
- data/rdoc/images/date.png +0 -0
- data/rdoc/images/delete.png +0 -0
- data/rdoc/images/find.png +0 -0
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- data/rdoc/images/macFFBgHack.png +0 -0
- data/rdoc/images/package.png +0 -0
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- data/rdoc/images/ruby.png +0 -0
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- data/rdoc/js/darkfish.js +0 -140
- data/rdoc/js/jquery.js +0 -18
- data/rdoc/js/navigation.js +0 -142
- data/rdoc/js/search.js +0 -109
- data/rdoc/js/search_index.js +0 -1
- data/rdoc/js/searcher.js +0 -228
- data/rdoc/rdoc.css +0 -580
- data/rdoc/rubyneat_gemspec.html +0 -387
- data/rdoc/table_of_contents.html +0 -2502
- data/rdoc/xordebug_log.html +0 -170598
- data/rdoc/xorsin_log.html +0 -22569
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<p><h1 id=“label-Neuron+–+Basis+of+all+Neat+Neuron+types.”>Neuron –
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<p><p>Normally contains primatives which aids in its own expression, but
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<p class="children"><span class='object_link'><a href="BasicNeuronTypes/CosineNeuron.html" title="NEAT::BasicNeuronTypes::CosineNeuron (class)">BasicNeuronTypes::CosineNeuron</a></span>, <span class='object_link'><a href="BasicNeuronTypes/InputNeuron.html" title="NEAT::BasicNeuronTypes::InputNeuron (class)">BasicNeuronTypes::InputNeuron</a></span>, <span class='object_link'><a href="BasicNeuronTypes/SigmoidNeuron.html" title="NEAT::BasicNeuronTypes::SigmoidNeuron (class)">BasicNeuronTypes::SigmoidNeuron</a></span>, <span class='object_link'><a href="BasicNeuronTypes/SineNeuron.html" title="NEAT::BasicNeuronTypes::SineNeuron (class)">BasicNeuronTypes::SineNeuron</a></span>, <span class='object_link'><a href="BasicNeuronTypes/TanhNeuron.html" title="NEAT::BasicNeuronTypes::TanhNeuron (class)">BasicNeuronTypes::TanhNeuron</a></span></p></pre>
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<p><p>List of neuron types defined.</p></p>
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<p><p>Genotype to which we belong.</p> </div></span></p>
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<p><p>(assigned by wire!) Heirarchy number in the Genome / Critter We
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<p><p>This is true if this is an output neuron.</p>
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-
|
434
|
-
<pre class="ruby"> <span class="ruby-operator"><</span><span class="ruby-identifier">li</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">"public "</span><span class="ruby-operator">></span>
|
435
|
-
<span class="ruby-operator"><</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">"summary_signature"</span><span class="ruby-operator">></span>
|
436
|
-
|
437
|
-
<span class="ruby-operator"><</span><span class="ruby-identifier">a</span> <span class="ruby-identifier">href</span>=<span class="ruby-node">"#neuron_types-class_method"</span> <span class="ruby-identifier">title</span>=<span class="ruby-string">"neuron_types (class method)"</span><span class="ruby-operator">></span><span class="ruby-operator">+</span> (<span class="ruby-constant">Object</span>) <span class="ruby-operator"><</span><span class="ruby-identifier">strong</span><span class="ruby-operator">></span><span class="ruby-identifier">neuron_types</span><span class="ruby-operator"><</span><span class="ruby-regexp">/strong> </</span><span class="ruby-identifier">a</span><span class="ruby-operator">></span>
|
438
|
-
|
439
|
-
<span class="ruby-operator"><</span><span class="ruby-regexp">/span>
|
440
|
-
|
441
|
-
<span class="summary_desc"><div class='inline'>
|
442
|
-
</span></pre>
|
443
|
-
|
444
|
-
<p><p>List of distinct neuron types (classes).</p>
|
445
|
-
</div></span></p>
|
446
|
-
|
447
|
-
<p></li></p>
|
448
|
-
|
449
|
-
<pre> </ul>
|
450
|
-
|
451
|
-
<h2>
|
452
|
-
Instance Method Summary
|
453
|
-
<small>(<a href="#" class="summary_toggle">collapse</a>)</small>
|
454
|
-
</h2>
|
455
|
-
|
456
|
-
<ul class="summary">
|
457
|
-
|
458
|
-
<li class="public ">
|
459
|
-
<span class="summary_signature">
|
460
|
-
|
461
|
-
<a href="#bias%3F-instance_method" title="#bias? (instance method)">- (Boolean) <strong>bias?</strong> </a>
|
462
|
-
|
463
|
-
</span>
|
464
|
-
|
465
|
-
<span class="summary_desc"><div class='inline'></div></span></pre>
|
466
|
-
|
467
|
-
<p></li></p>
|
468
|
-
|
469
|
-
<pre> <li class="public ">
|
470
|
-
<span class="summary_signature">
|
471
|
-
|
472
|
-
<a href="#express-instance_method" title="#express (instance method)">- (Object) <strong>express</strong>(instance) </a>
|
473
|
-
|
474
|
-
</span>
|
475
|
-
|
476
|
-
<span class="summary_desc"><div class='inline'></pre>
|
477
|
-
|
478
|
-
<p><p>Function must be implemented by subclasses for phenotype
|
479
|
-
generation.</p> </div></span></p>
|
480
|
-
|
481
|
-
<p></li></p>
|
482
|
-
|
483
|
-
<pre> <li class="public ">
|
484
|
-
<span class="summary_signature">
|
485
|
-
|
486
|
-
<a href="#input%3F-instance_method" title="#input? (instance method)">- (Boolean) <strong>input?</strong> </a>
|
487
|
-
|
488
|
-
</span>
|
489
|
-
|
490
|
-
<span class="summary_desc"><div class='inline'></div></span></pre>
|
491
|
-
|
492
|
-
<p></li></p>
|
493
|
-
|
494
|
-
<pre> <li class="public ">
|
495
|
-
<span class="summary_signature">
|
496
|
-
|
497
|
-
<a href="#output%3F-instance_method" title="#output? (instance method)">- (Boolean) <strong>output?</strong> </a>
|
498
|
-
|
499
|
-
</span>
|
500
|
-
|
501
|
-
<span class="summary_desc"><div class='inline'></pre>
|
502
|
-
|
503
|
-
<p><p>Instantiation is of outout type?.</p>
|
504
|
-
</div></span></p>
|
505
|
-
|
506
|
-
<p></li></p>
|
507
|
-
|
508
|
-
<pre class="ruby"> <span class="ruby-operator"><</span><span class="ruby-regexp">/ul>
|
509
|
-
|
510
|
-
<h3 class="inherited">Methods included from <span class='object_link'><a href="Graph.html" title="NEAT::Graph (module)">Graph</</span><span class="ruby-identifier">a</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-regexp">/span></</span><span class="ruby-identifier">h3</span><span class="ruby-operator">></span>
|
511
|
-
<span class="ruby-operator"><</span><span class="ruby-identifier">p</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">"inherited"</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">'object_link'</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-identifier">a</span> <span class="ruby-identifier">href</span>=<span class="ruby-node">"Graph.html#%3C%3C-instance_method"</span> <span class="ruby-identifier">title</span>=<span class="ruby-node">"NEAT::Graph#&lt;&lt; (method)"</span><span class="ruby-operator">></span><span class="ruby-comment">#<<</a></span>, <span class='object_link'><a href="Graph.html#add-instance_method" title="NEAT::Graph#add (method)">#add</a></span>, <span class='object_link'><a href="Graph.html#clear_graph-instance_method" title="NEAT::Graph#clear_graph (method)">#clear_graph</a></span>, <span class='object_link'><a href="Graph.html#inputs-instance_method" title="NEAT::Graph#inputs (method)">#inputs</a></span></p></span>
|
512
|
-
|
513
|
-
<span class="ruby-operator"><</span><span class="ruby-identifier">h3</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">"inherited"</span><span class="ruby-operator">></span><span class="ruby-constant">Methods</span> <span class="ruby-identifier">inherited</span> <span class="ruby-identifier">from</span> <span class="ruby-operator"><</span><span class="ruby-identifier">span</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">'object_link'</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-identifier">a</span> <span class="ruby-identifier">href</span>=<span class="ruby-string">"NeatOb.html"</span> <span class="ruby-identifier">title</span>=<span class="ruby-string">"NEAT::NeatOb (class)"</span><span class="ruby-operator">></span><span class="ruby-constant">NeatOb</span><span class="ruby-operator"><</span><span class="ruby-regexp">/a></s</span><span class="ruby-identifier">pan</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-node">/h3>
|
514
|
-
<p class="inherited"><span class='object_link'><a href="NeatOb.html#initialize-instance_method" title="NEAT::NeatOb#initialize (method)">#initialize</</span><span class="ruby-identifier">a</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-node">/span>, <span class='object_link'><a href="NeatOb.html#log-instance_method" title="NEAT::NeatOb#log (method)">#log</</span><span class="ruby-identifier">a</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-node">/span>, <span class='object_link'><a href="NeatOb.html#log-class_method" title="NEAT::NeatOb.log (method)">log</</span><span class="ruby-identifier">a</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-node">/span>, <span class='object_link'><a href="NeatOb.html#to_s-instance_method" title="NEAT::NeatOb#to_s (method)">#to_s</</span><span class="ruby-identifier">a</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-regexp">/span></</span><span class="ruby-identifier">p</span><span class="ruby-operator">></span>
|
515
|
-
|
516
|
-
<span class="ruby-operator"><</span><span class="ruby-identifier">div</span> <span class="ruby-identifier">id</span>=<span class="ruby-string">"constructor_details"</span> <span class="ruby-identifier">class</span>=<span class="ruby-string">"method_details_list"</span><span class="ruby-operator">></span>
|
517
|
-
<span class="ruby-operator"><</span><span class="ruby-identifier">h2</span><span class="ruby-operator">></span><span class="ruby-constant">Constructor</span> <span class="ruby-constant">Details</span><span class="ruby-operator"><</span><span class="ruby-node">/h2>
|
518
|
-
|
519
|
-
<p class="notice">This class inherits a constructor from <span class='object_link'><a href="NeatOb.html#initialize-instance_method" title="NEAT::NeatOb#initialize (method)">NEAT::NeatOb</</span><span class="ruby-identifier">a</span><span class="ruby-operator">></span><span class="ruby-operator"><</span><span class="ruby-regexp">/span></</span><span class="ruby-identifier">p</span><span class="ruby-operator">></span>
|
520
|
-
</pre>
|
521
|
-
|
522
|
-
<p></div></p>
|
523
|
-
|
524
|
-
<pre><div id="instance_attr_details" class="attr_details">
|
525
|
-
<h2>Instance Attribute Details</h2>
|
526
|
-
|
527
|
-
<span id=""></span>
|
528
|
-
<div class="method_details first">
|
529
|
-
<h3 class="signature first" id="genotype-instance_method">
|
530
|
-
|
531
|
-
- (<tt>Object</tt>) <strong>genotype</strong> <span class="extras">(readonly)</span></pre>
|
532
|
-
|
533
|
-
<p></h3><div class=“docstring”></p>
|
534
|
-
|
535
|
-
<pre><div class="discussion"></pre>
|
536
|
-
|
537
|
-
<p><p>Genotype to which we belong</p></p>
|
538
|
-
|
539
|
-
<pre></div></pre>
|
540
|
-
|
541
|
-
<p></div> <div class=“tags”></p>
|
542
|
-
|
543
|
-
<p></div><table class=“source_code”></p>
|
544
|
-
|
545
|
-
<pre><tr>
|
546
|
-
<td>
|
547
|
-
<pre class="lines"></pre>
|
548
|
-
|
549
|
-
<p>19 20 21</pre></p>
|
550
|
-
|
551
|
-
<pre></td>
|
552
|
-
<td>
|
553
|
-
<pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 19</span></pre>
|
554
|
-
|
555
|
-
<p><span class='kw'>def</span> <span class='id
|
556
|
-
identifier rubyid_genotype'>genotype</span></p>
|
557
|
-
|
558
|
-
<pre><span class='ivar'>@genotype</span></pre>
|
559
|
-
|
560
|
-
<p><span class='kw'>end</span></pre></p>
|
561
|
-
|
562
|
-
<pre> </td>
|
563
|
-
</tr></pre>
|
564
|
-
|
565
|
-
<p></table> </div></p>
|
566
|
-
|
567
|
-
<pre> <span id="heirarchy_number=-instance_method"></span>
|
568
|
-
<div class="method_details ">
|
569
|
-
<h3 class="signature " id="heirarchy_number-instance_method">
|
570
|
-
|
571
|
-
- (<tt>Object</tt>) <strong>heirarchy_number</strong></pre>
|
572
|
-
|
573
|
-
<p></h3><div class=“docstring”></p>
|
574
|
-
|
575
|
-
<pre><div class="discussion"></pre>
|
576
|
-
|
577
|
-
<p><p>(assigned by wire!) Heirarchy number in the Genome / Critter We
|
578
|
-
need this to assure we add genes in the proper order. This will be
|
579
|
-
recalculated every time a new neuron is added.</p></p>
|
580
|
-
|
581
|
-
<pre></div></pre>
|
582
|
-
|
583
|
-
<p></div> <div class=“tags”></p>
|
584
|
-
|
585
|
-
<p></div><table class=“source_code”></p>
|
586
|
-
|
587
|
-
<pre><tr>
|
588
|
-
<td>
|
589
|
-
<pre class="lines"></pre>
|
590
|
-
|
591
|
-
<p>25 26 27</pre></p>
|
592
|
-
|
593
|
-
<pre></td>
|
594
|
-
<td>
|
595
|
-
<pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 25</span></pre>
|
596
|
-
|
597
|
-
<p><span class='kw'>def</span> <span class='id
|
598
|
-
identifier rubyid_heirarchy_number'>heirarchy_number</span></p>
|
599
|
-
|
600
|
-
<pre><span class='ivar'>@heirarchy_number</span></pre>
|
601
|
-
|
602
|
-
<p><span class='kw'>end</span></pre></p>
|
603
|
-
|
604
|
-
<pre> </td>
|
605
|
-
</tr></pre>
|
606
|
-
|
607
|
-
<p></table> </div></p>
|
608
|
-
|
609
|
-
<pre> <span id="output=-instance_method"></span>
|
610
|
-
<div class="method_details ">
|
611
|
-
<h3 class="signature " id="output-instance_method">
|
612
|
-
|
613
|
-
- (<tt>Object</tt>) <strong>output</strong></pre>
|
614
|
-
|
615
|
-
<p></h3><div class=“docstring”></p>
|
616
|
-
|
617
|
-
<pre><div class="discussion"></pre>
|
618
|
-
|
619
|
-
<p><p>This is true if this is an output neuron.</p></p>
|
620
|
-
|
621
|
-
<pre></div></pre>
|
622
|
-
|
623
|
-
<p></div> <div class=“tags”></p>
|
624
|
-
|
625
|
-
<p></div><table class=“source_code”></p>
|
626
|
-
|
627
|
-
<pre><tr>
|
628
|
-
<td>
|
629
|
-
<pre class="lines"></pre>
|
630
|
-
|
631
|
-
<p>28 29 30</pre></p>
|
632
|
-
|
633
|
-
<pre></td>
|
634
|
-
<td>
|
635
|
-
<pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 28</span></pre>
|
636
|
-
|
637
|
-
<p><span class='kw'>def</span> <span class='id
|
638
|
-
identifier rubyid_output'>output</span></p>
|
639
|
-
|
640
|
-
<pre><span class='ivar'>@output</span></pre>
|
641
|
-
|
642
|
-
<p><span class='kw'>end</span></pre></p>
|
643
|
-
|
644
|
-
<pre> </td>
|
645
|
-
</tr></pre>
|
646
|
-
|
647
|
-
<p></table> </div></p>
|
648
|
-
|
649
|
-
<pre> <span id="trait=-instance_method"></span>
|
650
|
-
<div class="method_details ">
|
651
|
-
<h3 class="signature " id="trait-instance_method">
|
652
|
-
|
653
|
-
- (<tt>Object</tt>) <strong>trait</strong></pre>
|
654
|
-
|
655
|
-
<p></h3><div class=“docstring”></p>
|
656
|
-
|
657
|
-
<pre><div class="discussion"></pre>
|
658
|
-
|
659
|
-
<p><p>Returns the value of attribute trait</p></p>
|
660
|
-
|
661
|
-
<pre></div></pre>
|
662
|
-
|
663
|
-
<p></div> <div class=“tags”></p>
|
664
|
-
|
665
|
-
<p></div><table class=“source_code”></p>
|
666
|
-
|
667
|
-
<pre><tr>
|
668
|
-
<td>
|
669
|
-
<pre class="lines"></pre>
|
670
|
-
|
671
|
-
<p>20 21 22</pre></p>
|
672
|
-
|
673
|
-
<pre></td>
|
674
|
-
<td>
|
675
|
-
<pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 20</span></pre>
|
676
|
-
|
677
|
-
<p><span class='kw'>def</span> <span class='id
|
678
|
-
identifier rubyid_trait'>trait</span></p>
|
679
|
-
|
680
|
-
<pre><span class='ivar'>@trait</span></pre>
|
681
|
-
|
682
|
-
<p><span class='kw'>end</span></pre></p>
|
683
|
-
|
684
|
-
<pre> </td>
|
685
|
-
</tr></pre>
|
686
|
-
|
687
|
-
<p></table> </div></p>
|
688
|
-
|
689
|
-
<pre></div>
|
690
|
-
|
691
|
-
<div id="class_method_details" class="method_details_list">
|
692
|
-
<h2>Class Method Details</h2>
|
693
|
-
|
694
|
-
<div class="method_details first">
|
695
|
-
<h3 class="signature first" id="bias?-class_method">
|
696
|
-
|
697
|
-
+ (<tt>Boolean</tt>) <strong>bias?</strong></pre>
|
698
|
-
|
699
|
-
<p></h3><div class=“docstring”></p>
|
700
|
-
|
701
|
-
<pre><div class="discussion">
|
702
|
-
|
703
|
-
</div></pre>
|
704
|
-
|
705
|
-
<p></div> <div class=“tags”></p>
|
706
|
-
|
707
|
-
<p><p class=“tag_title”>Returns:</p> <ul class=“return”></p>
|
708
|
-
|
709
|
-
<pre><li>
|
710
|
-
|
711
|
-
<span class='type'>(<tt>Boolean</tt>)</span>
|
712
|
-
|
713
|
-
</li></pre>
|
714
|
-
|
715
|
-
<p></ul></p>
|
716
|
-
|
717
|
-
<p></div><table class=“source_code”></p>
|
718
|
-
|
719
|
-
<pre><tr>
|
720
|
-
<td>
|
721
|
-
<pre class="lines"></pre>
|
722
|
-
|
723
|
-
<p>37</pre></p>
|
724
|
-
|
725
|
-
<pre></td>
|
726
|
-
<td>
|
727
|
-
<pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 37</span></pre>
|
728
|
-
|
729
|
-
<p><span class='kw'>def</span> <span
|
730
|
-
class='kw'>self</span><span
|
731
|
-
class='period'>.</span><span class='id identifier
|
732
|
-
rubyid_bias?'>bias?</span> <span
|
733
|
-
class='semicolon'>;</span> <span
|
734
|
-
class='kw'>false</span> <span
|
735
|
-
class='semicolon'>;</span> <span
|
736
|
-
class='kw'>end</span></pre></p>
|
737
|
-
|
738
|
-
<pre> </td>
|
739
|
-
</tr></pre>
|
740
|
-
|
741
|
-
<p></table> </div></p>
|
742
|
-
|
743
|
-
<pre> <div class="method_details ">
|
744
|
-
<h3 class="signature " id="inherited-class_method">
|
745
|
-
|
746
|
-
+ (<tt>Object</tt>) <strong>inherited</strong>(clazz)</pre>
|
747
|
-
|
748
|
-
<p></h3><table class=“source_code”></p>
|
749
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|
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|
-
<pre><tr>
|
751
|
-
<td>
|
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<pre class="lines"></pre>
|
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|
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<p>43 44 45</pre></p>
|
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|
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|
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<pre></td>
|
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|
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<td>
|
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<pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 43</span></pre>
|
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|
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|
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<p><span class='kw'>def</span> <span
|
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|
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class='kw'>self</span><span
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class='period'>.</span><span class='id identifier
|
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rubyid_inherited'>inherited</span><span
|
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class='lparen'>(</span><span class='id identifier
|
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rubyid_clazz'>clazz</span><span
|
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class='rparen'>)</span></p>
|
767
|
-
|
768
|
-
<pre><span class='cvar'>@@neuron_types</span> <span class='op'>&lt;&lt;</span> <span class='id identifier rubyid_clazz'>clazz</span></pre>
|
769
|
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|
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|
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<p><span class='kw'>end</span></pre></p>
|
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<pre> </td>
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</tr></pre>
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<p></table> </div></p>
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|
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<pre> <div class="method_details ">
|
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|
-
<h3 class="signature " id="input?-class_method">
|
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|
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|
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|
-
+ (<tt>Boolean</tt>) <strong>input?</strong></pre>
|
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|
782
|
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<p></h3><div class=“docstring”></p>
|
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|
784
|
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<pre><div class="discussion"></pre>
|
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|
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<p><p>Class is is of Input type?</p></p>
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<pre></div></pre>
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<p></div> <div class=“tags”></p>
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<p><p class=“tag_title”>Returns:</p> <ul class=“return”></p>
|
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|
-
|
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|
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<pre><li>
|
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-
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796
|
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<span class='type'>(<tt>Boolean</tt>)</span>
|
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|
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</li></pre>
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<p></ul></p>
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<p></div><table class=“source_code”></p>
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<pre><tr>
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|
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<td>
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<pre class="lines"></pre>
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|
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|
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<p>34</pre></p>
|
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|
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|
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<pre></td>
|
811
|
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<td>
|
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|
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<pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 34</span></pre>
|
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|
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|
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|
-
<p><span class='kw'>def</span> <span
|
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|
-
class='kw'>self</span><span
|
816
|
-
class='period'>.</span><span class='id identifier
|
817
|
-
rubyid_input?'>input?</span> <span
|
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|
-
class='semicolon'>;</span> <span
|
819
|
-
class='kw'>false</span> <span
|
820
|
-
class='semicolon'>;</span> <span
|
821
|
-
class='kw'>end</span></pre></p>
|
822
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|
823
|
-
<pre> </td>
|
824
|
-
</tr></pre>
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|
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|
-
<p></table> </div></p>
|
827
|
-
|
828
|
-
<pre> <div class="method_details ">
|
829
|
-
<h3 class="signature " id="neuron_types-class_method">
|
830
|
-
|
831
|
-
+ (<tt>Object</tt>) <strong>neuron_types</strong></pre>
|
832
|
-
|
833
|
-
<p></h3><div class=“docstring”></p>
|
834
|
-
|
835
|
-
<pre><div class="discussion"></pre>
|
836
|
-
|
837
|
-
<p><p>List of distinct neuron types (classes)</p></p>
|
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|
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|
839
|
-
<pre></div></pre>
|
840
|
-
|
841
|
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<p></div> <div class=“tags”></p>
|
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|
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<p></div><table class=“source_code”></p>
|
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|
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<pre><tr>
|
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|
-
<td>
|
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<pre class="lines"></pre>
|
848
|
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|
849
|
-
<p>48</pre></p>
|
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|
-
|
851
|
-
<pre></td>
|
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|
-
<td>
|
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|
-
<pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 48</span></pre>
|
854
|
-
|
855
|
-
<p><span class='kw'>def</span> <span
|
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|
-
class='kw'>self</span><span
|
857
|
-
class='period'>.</span><span class='id identifier
|
858
|
-
rubyid_neuron_types'>neuron_types</span><span
|
859
|
-
class='semicolon'>;</span> <span
|
860
|
-
class='cvar'>@@neuron_types</span> <span
|
861
|
-
class='semicolon'>;</span> <span
|
862
|
-
class='kw'>end</span></pre></p>
|
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|
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|
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|
-
<pre> </td>
|
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|
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</tr></pre>
|
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<p></table> </div></p>
|
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|
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<pre></div>
|
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|
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|
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<div id="instance_method_details" class="method_details_list">
|
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|
-
<h2>Instance Method Details</h2>
|
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|
-
|
874
|
-
<div class="method_details first">
|
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|
-
<h3 class="signature first" id="bias?-instance_method">
|
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|
-
|
877
|
-
- (<tt>Boolean</tt>) <strong>bias?</strong></pre>
|
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|
-
|
879
|
-
<p></h3><div class=“docstring”></p>
|
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|
-
|
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|
-
<pre><div class="discussion">
|
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|
-
|
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|
-
</div></pre>
|
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|
-
|
885
|
-
<p></div> <div class=“tags”></p>
|
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|
-
|
887
|
-
<p><p class=“tag_title”>Returns:</p> <ul class=“return”></p>
|
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|
-
|
889
|
-
<pre><li>
|
890
|
-
|
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|
-
<span class='type'>(<tt>Boolean</tt>)</span>
|
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|
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|
893
|
-
</li></pre>
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|
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|
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<p></ul></p>
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|
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|
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<p></div><table class=“source_code”></p>
|
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|
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|
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<pre><tr>
|
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|
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<td>
|
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|
-
<pre class="lines"></pre>
|
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|
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|
903
|
-
<p>38</pre></p>
|
904
|
-
|
905
|
-
<pre></td>
|
906
|
-
<td>
|
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|
-
<pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 38</span></pre>
|
908
|
-
|
909
|
-
<p><span class='kw'>def</span> <span class='id
|
910
|
-
identifier rubyid_bias?'>bias?</span> <span
|
911
|
-
class='semicolon'>;</span> <span
|
912
|
-
class='kw'>self</span><span
|
913
|
-
class='period'>.</span><span class='id identifier
|
914
|
-
rubyid_class'>class</span><span
|
915
|
-
class='period'>.</span><span class='id identifier
|
916
|
-
rubyid_bias?'>bias?</span> <span
|
917
|
-
class='semicolon'>;</span> <span
|
918
|
-
class='kw'>end</span></pre></p>
|
919
|
-
|
920
|
-
<pre> </td>
|
921
|
-
</tr></pre>
|
922
|
-
|
923
|
-
<p></table> </div></p>
|
924
|
-
|
925
|
-
<pre> <div class="method_details ">
|
926
|
-
<h3 class="signature " id="express-instance_method">
|
927
|
-
|
928
|
-
- (<tt>Object</tt>) <strong>express</strong>(instance)</pre>
|
929
|
-
|
930
|
-
<p></h3><div class=“docstring”></p>
|
931
|
-
|
932
|
-
<pre><div class="discussion"></pre>
|
933
|
-
|
934
|
-
<p><p>Function must be implemented by subclasses for phenotype
|
935
|
-
generation. Basically, an instance is passed to this function and it will
|
936
|
-
add a function to sum all inputs and a apply an operator to the
|
937
|
-
sum.</p></p>
|
938
|
-
|
939
|
-
<pre></div></pre>
|
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|
-
|
941
|
-
<p></div> <div class=“tags”></p>
|
942
|
-
|
943
|
-
<p></div><table class=“source_code”></p>
|
944
|
-
|
945
|
-
<pre><tr>
|
946
|
-
<td>
|
947
|
-
<pre class="lines"></pre>
|
948
|
-
|
949
|
-
<p>54 55 56</pre></p>
|
950
|
-
|
951
|
-
<pre></td>
|
952
|
-
<td>
|
953
|
-
<pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 54</span></pre>
|
954
|
-
|
955
|
-
<p><span class='kw'>def</span> <span class='id
|
956
|
-
identifier rubyid_express'>express</span><span
|
957
|
-
class='lparen'>(</span><span class='id identifier
|
958
|
-
rubyid_instance'>instance</span><span
|
959
|
-
class='rparen'>)</span></p>
|
960
|
-
|
961
|
-
<pre><span class='id identifier rubyid_raise'>raise</span> <span class='const'>NeatException</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>express() must be implemented by subclass.</span><span class='tstring_end'>&quot;</span></span></pre>
|
962
|
-
|
963
|
-
<p><span class='kw'>end</span></pre></p>
|
964
|
-
|
965
|
-
<pre> </td>
|
966
|
-
</tr></pre>
|
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|
-
|
968
|
-
<p></table> </div></p>
|
969
|
-
|
970
|
-
<pre> <div class="method_details ">
|
971
|
-
<h3 class="signature " id="input?-instance_method">
|
972
|
-
|
973
|
-
- (<tt>Boolean</tt>) <strong>input?</strong></pre>
|
974
|
-
|
975
|
-
<p></h3><div class=“docstring”></p>
|
976
|
-
|
977
|
-
<pre><div class="discussion">
|
978
|
-
|
979
|
-
</div></pre>
|
980
|
-
|
981
|
-
<p></div> <div class=“tags”></p>
|
982
|
-
|
983
|
-
<p><p class=“tag_title”>Returns:</p> <ul class=“return”></p>
|
984
|
-
|
985
|
-
<pre><li>
|
986
|
-
|
987
|
-
<span class='type'>(<tt>Boolean</tt>)</span>
|
988
|
-
|
989
|
-
</li></pre>
|
990
|
-
|
991
|
-
<p></ul></p>
|
992
|
-
|
993
|
-
<p></div><table class=“source_code”></p>
|
994
|
-
|
995
|
-
<pre><tr>
|
996
|
-
<td>
|
997
|
-
<pre class="lines"></pre>
|
998
|
-
|
999
|
-
<p>35</pre></p>
|
1000
|
-
|
1001
|
-
<pre></td>
|
1002
|
-
<td>
|
1003
|
-
<pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 35</span></pre>
|
1004
|
-
|
1005
|
-
<p><span class='kw'>def</span> <span class='id
|
1006
|
-
identifier rubyid_input?'>input?</span> <span
|
1007
|
-
class='semicolon'>;</span> <span
|
1008
|
-
class='kw'>self</span><span
|
1009
|
-
class='period'>.</span><span class='id identifier
|
1010
|
-
rubyid_class'>class</span><span
|
1011
|
-
class='period'>.</span><span class='id identifier
|
1012
|
-
rubyid_input?'>input?</span> <span
|
1013
|
-
class='semicolon'>;</span> <span
|
1014
|
-
class='kw'>end</span></pre></p>
|
1015
|
-
|
1016
|
-
<pre> </td>
|
1017
|
-
</tr></pre>
|
1018
|
-
|
1019
|
-
<p></table> </div></p>
|
1020
|
-
|
1021
|
-
<pre> <div class="method_details ">
|
1022
|
-
<h3 class="signature " id="output?-instance_method">
|
1023
|
-
|
1024
|
-
- (<tt>Boolean</tt>) <strong>output?</strong></pre>
|
1025
|
-
|
1026
|
-
<p></h3><div class=“docstring”></p>
|
1027
|
-
|
1028
|
-
<pre><div class="discussion"></pre>
|
1029
|
-
|
1030
|
-
<p><p>Instantiation is of outout type?</p></p>
|
1031
|
-
|
1032
|
-
<pre></div></pre>
|
1033
|
-
|
1034
|
-
<p></div> <div class=“tags”></p>
|
1035
|
-
|
1036
|
-
<p><p class=“tag_title”>Returns:</p> <ul class=“return”></p>
|
1037
|
-
|
1038
|
-
<pre><li>
|
1039
|
-
|
1040
|
-
<span class='type'>(<tt>Boolean</tt>)</span>
|
1041
|
-
|
1042
|
-
</li></pre>
|
1043
|
-
|
1044
|
-
<p></ul></p>
|
1045
|
-
|
1046
|
-
<p></div><table class=“source_code”></p>
|
1047
|
-
|
1048
|
-
<pre><tr>
|
1049
|
-
<td>
|
1050
|
-
<pre class="lines"></pre>
|
1051
|
-
|
1052
|
-
<p>41</pre></p>
|
1053
|
-
|
1054
|
-
<pre></td>
|
1055
|
-
<td>
|
1056
|
-
<pre class="code"><span class="info file"># File 'lib/rubyneat/neuron.rb', line 41</span></pre>
|
1057
|
-
|
1058
|
-
<p><span class='kw'>def</span> <span class='id
|
1059
|
-
identifier rubyid_output?'>output?</span> <span
|
1060
|
-
class='semicolon'>;</span> <span
|
1061
|
-
class='op'>!</span><span
|
1062
|
-
class='op'>!</span><span
|
1063
|
-
class='ivar'>@output</span> <span
|
1064
|
-
class='semicolon'>;</span> <span
|
1065
|
-
class='kw'>end</span></pre></p>
|
1066
|
-
|
1067
|
-
<pre> </td>
|
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|
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</tr></pre>
|
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|
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|
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|
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<p></table> </div></p>
|
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|
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|
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<pre></div></pre>
|
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|
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|
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<pre> <div id="footer">
|
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|
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Generated on Sun Mar 16 16:36:51 2014 by
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<a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
|
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|
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0.8.7.3 (ruby-2.1.1).</pre>
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<footer id="validator-badges" role="contentinfo">
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<p><a href="http://validator.w3.org/check/referer">Validate</a>
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<p>Generated by <a href="http://rdoc.rubyforge.org">RDoc</a> 4.1.1.
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<p>Based on <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish</a> by <a href="http://deveiate.org">Michael Granger</a>.
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