endoreg-db 0.8.9.32__py3-none-any.whl
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- endoreg_db/__init__.py +0 -0
- endoreg_db/_version.py +34 -0
- endoreg_db/admin.py +97 -0
- endoreg_db/api/serializers/finding_descriptions.py +0 -0
- endoreg_db/api/views/finding_descriptions.py +0 -0
- endoreg_db/api_urls.py +4 -0
- endoreg_db/apps.py +17 -0
- endoreg_db/assets/dummy_model.ckpt +1 -0
- endoreg_db/authz/auth.py +78 -0
- endoreg_db/authz/backends.py +168 -0
- endoreg_db/authz/management/commands/list_routes.py +20 -0
- endoreg_db/authz/middleware.py +84 -0
- endoreg_db/authz/permissions.py +138 -0
- endoreg_db/authz/policy.py +224 -0
- endoreg_db/authz/settings.py +64 -0
- endoreg_db/authz/views_auth.py +70 -0
- endoreg_db/codemods/readme.md +88 -0
- endoreg_db/codemods/rename_datetime_fields.py +99 -0
- endoreg_db/config/__init__.py +0 -0
- endoreg_db/config/env.py +106 -0
- endoreg_db/config/settings/__init__.py +6 -0
- endoreg_db/config/settings/base.py +148 -0
- endoreg_db/config/settings/case_gen.py +32 -0
- endoreg_db/config/settings/dev.py +108 -0
- endoreg_db/config/settings/keycloak.py +177 -0
- endoreg_db/config/settings/prod.py +66 -0
- endoreg_db/config/settings/test.py +72 -0
- endoreg_db/data/__init__.py +135 -0
- endoreg_db/data/ai_model/data.yaml +7 -0
- endoreg_db/data/ai_model_label/label/data.yaml +88 -0
- endoreg_db/data/ai_model_label/label/polyp_classification.yaml +52 -0
- endoreg_db/data/ai_model_label/label-set/data.yaml +40 -0
- endoreg_db/data/ai_model_label/label-set/polyp_classifications.yaml +25 -0
- endoreg_db/data/ai_model_label/label-type/data.yaml +7 -0
- endoreg_db/data/ai_model_meta/default_multilabel_classification.yaml +27 -0
- endoreg_db/data/ai_model_type/data.yaml +7 -0
- endoreg_db/data/ai_model_video_segmentation_label/base_segmentation.yaml +176 -0
- endoreg_db/data/ai_model_video_segmentation_labelset/data.yaml +20 -0
- endoreg_db/data/case_template/rule/00_patient_lab_sample_add_default_value.yaml +167 -0
- endoreg_db/data/case_template/rule/01_patient-set-age.yaml +8 -0
- endoreg_db/data/case_template/rule/01_patient-set-gender.yaml +9 -0
- endoreg_db/data/case_template/rule/11_create_patient_lab_sample.yaml +23 -0
- endoreg_db/data/case_template/rule/12_create-patient_medication-anticoagulation.yaml +19 -0
- endoreg_db/data/case_template/rule/13_create-patient_medication_schedule-anticoagulation.yaml +19 -0
- endoreg_db/data/case_template/rule/19_create_patient.yaml +17 -0
- endoreg_db/data/case_template/rule_type/base_types.yaml +35 -0
- endoreg_db/data/case_template/rule_value/.init +0 -0
- endoreg_db/data/case_template/rule_value_type/base_types.yaml +59 -0
- endoreg_db/data/case_template/template/base.yaml +8 -0
- endoreg_db/data/case_template/template_type/pre_endoscopy.yaml +3 -0
- endoreg_db/data/case_template/tmp/_rule_value +13 -0
- endoreg_db/data/case_template/tmp/rule/01_atrial_fibrillation.yaml +21 -0
- endoreg_db/data/case_template/tmp/rule/02_create_object.yaml +10 -0
- endoreg_db/data/case_template/tmp/template/atrial_fibrillation_low_risk.yaml +7 -0
- endoreg_db/data/center/data.yaml +99 -0
- endoreg_db/data/center_resource/green_endoscopy_dashboard_CenterResource.yaml +144 -0
- endoreg_db/data/center_shift/ukw.yaml +9 -0
- endoreg_db/data/center_waste/green_endoscopy_dashboard_CenterWaste.yaml +48 -0
- endoreg_db/data/contraindication/bleeding.yaml +11 -0
- endoreg_db/data/db_summary.csv +58 -0
- endoreg_db/data/db_summary.xlsx +0 -0
- endoreg_db/data/disease/cardiovascular.yaml +37 -0
- endoreg_db/data/disease/hepatology.yaml +5 -0
- endoreg_db/data/disease/misc.yaml +5 -0
- endoreg_db/data/disease/renal.yaml +5 -0
- endoreg_db/data/disease_classification/chronic_kidney_disease.yaml +6 -0
- endoreg_db/data/disease_classification/coronary_vessel_disease.yaml +6 -0
- endoreg_db/data/disease_classification_choice/chronic_kidney_disease.yaml +41 -0
- endoreg_db/data/disease_classification_choice/coronary_vessel_disease.yaml +20 -0
- endoreg_db/data/distribution/date/patient.yaml +7 -0
- endoreg_db/data/distribution/multiple_categorical/.init +0 -0
- endoreg_db/data/distribution/numeric/data.yaml +14 -0
- endoreg_db/data/distribution/single_categorical/patient.yaml +7 -0
- endoreg_db/data/emission_factor/green_endoscopy_dashboard_EmissionFactor.yaml +132 -0
- endoreg_db/data/endoscope/data.yaml +93 -0
- endoreg_db/data/endoscope_type/data.yaml +11 -0
- endoreg_db/data/endoscopy_processor/data.yaml +50 -0
- endoreg_db/data/event/cardiology.yaml +15 -0
- endoreg_db/data/event/neurology.yaml +14 -0
- endoreg_db/data/event/surgery.yaml +13 -0
- endoreg_db/data/event/thrombembolism.yaml +20 -0
- endoreg_db/data/event_classification/data.yaml +4 -0
- endoreg_db/data/event_classification_choice/data.yaml +9 -0
- endoreg_db/data/examination/examinations/data.yaml +172 -0
- endoreg_db/data/examination/time/data.yaml +48 -0
- endoreg_db/data/examination/time-type/data.yaml +5 -0
- endoreg_db/data/examination/type/data.yaml +17 -0
- endoreg_db/data/examination_indication/endoscopy.yaml +359 -0
- endoreg_db/data/examination_indication_classification/endoscopy.yaml +90 -0
- endoreg_db/data/examination_indication_classification_choice/endoscopy.yaml +97 -0
- endoreg_db/data/examination_requirement_set/colonoscopy.yaml +15 -0
- endoreg_db/data/finding/00_generic.yaml +35 -0
- endoreg_db/data/finding/00_generic_complication.yaml +9 -0
- endoreg_db/data/finding/01_gastroscopy_baseline.yaml +88 -0
- endoreg_db/data/finding/01_gastroscopy_observation.yaml +113 -0
- endoreg_db/data/finding/02_colonoscopy_baseline.yaml +53 -0
- endoreg_db/data/finding/02_colonoscopy_hidden.yaml +119 -0
- endoreg_db/data/finding/02_colonoscopy_observation.yaml +152 -0
- endoreg_db/data/finding_classification/00_generic.yaml +44 -0
- endoreg_db/data/finding_classification/00_generic_histology.yaml +28 -0
- endoreg_db/data/finding_classification/00_generic_lesion.yaml +52 -0
- endoreg_db/data/finding_classification/02_colonoscopy_baseline.yaml +83 -0
- endoreg_db/data/finding_classification/02_colonoscopy_histology.yaml +13 -0
- endoreg_db/data/finding_classification/02_colonoscopy_other.yaml +12 -0
- endoreg_db/data/finding_classification/02_colonoscopy_polyp.yaml +101 -0
- endoreg_db/data/finding_classification_choice/00_generic.yaml +15 -0
- endoreg_db/data/finding_classification_choice/00_generic_baseline.yaml +23 -0
- endoreg_db/data/finding_classification_choice/00_generic_complication.yaml +15 -0
- endoreg_db/data/finding_classification_choice/00_generic_histology.yaml +21 -0
- endoreg_db/data/finding_classification_choice/00_generic_lesion.yaml +158 -0
- endoreg_db/data/finding_classification_choice/02_colonoscopy_bowel_preparation.yaml +49 -0
- endoreg_db/data/finding_classification_choice/02_colonoscopy_generic.yaml +19 -0
- endoreg_db/data/finding_classification_choice/02_colonoscopy_histology.yaml +20 -0
- endoreg_db/data/finding_classification_choice/02_colonoscopy_location.yaml +248 -0
- endoreg_db/data/finding_classification_choice/02_colonoscopy_other.yaml +34 -0
- endoreg_db/data/finding_classification_choice/02_colonoscopy_polyp_advanced_imaging.yaml +76 -0
- endoreg_db/data/finding_classification_choice/02_colonoscopy_polyp_morphology.yaml +75 -0
- endoreg_db/data/finding_classification_choice/02_colonoscopy_size.yaml +27 -0
- endoreg_db/data/finding_classification_type/00_generic.yaml +53 -0
- endoreg_db/data/finding_classification_type/02_colonoscopy.yaml +9 -0
- endoreg_db/data/finding_intervention/00_generic_endoscopy.yaml +59 -0
- endoreg_db/data/finding_intervention/00_generic_endoscopy_ablation.yaml +44 -0
- endoreg_db/data/finding_intervention/00_generic_endoscopy_bleeding.yaml +55 -0
- endoreg_db/data/finding_intervention/00_generic_endoscopy_resection.yaml +85 -0
- endoreg_db/data/finding_intervention/00_generic_endoscopy_stenosis.yaml +17 -0
- endoreg_db/data/finding_intervention/00_generic_endoscopy_stent.yaml +9 -0
- endoreg_db/data/finding_intervention/01_gastroscopy.yaml +19 -0
- endoreg_db/data/finding_intervention/04_eus.yaml +39 -0
- endoreg_db/data/finding_intervention/05_ercp.yaml +3 -0
- endoreg_db/data/finding_intervention_type/endoscopy.yaml +15 -0
- endoreg_db/data/finding_type/data.yaml +39 -0
- endoreg_db/data/gender/data.yaml +42 -0
- endoreg_db/data/information_source/annotation.yaml +6 -0
- endoreg_db/data/information_source/data.yaml +30 -0
- endoreg_db/data/information_source/endoscopy_guidelines.yaml +7 -0
- endoreg_db/data/information_source/medication.yaml +6 -0
- endoreg_db/data/information_source/prediction.yaml +7 -0
- endoreg_db/data/information_source_type/data.yaml +8 -0
- endoreg_db/data/lab_value/cardiac_enzymes.yaml +37 -0
- endoreg_db/data/lab_value/coagulation.yaml +54 -0
- endoreg_db/data/lab_value/electrolytes.yaml +228 -0
- endoreg_db/data/lab_value/gastrointestinal_function.yaml +133 -0
- endoreg_db/data/lab_value/hematology.yaml +184 -0
- endoreg_db/data/lab_value/hormones.yaml +59 -0
- endoreg_db/data/lab_value/lipids.yaml +53 -0
- endoreg_db/data/lab_value/misc.yaml +76 -0
- endoreg_db/data/lab_value/renal_function.yaml +12 -0
- endoreg_db/data/log_type/data.yaml +57 -0
- endoreg_db/data/lx_client_tag/base.yaml +54 -0
- endoreg_db/data/lx_client_type/base.yaml +30 -0
- endoreg_db/data/lx_permission/base.yaml +24 -0
- endoreg_db/data/lx_permission/endoreg.yaml +52 -0
- endoreg_db/data/material/material.yaml +91 -0
- endoreg_db/data/medication/anticoagulation.yaml +65 -0
- endoreg_db/data/medication/tah.yaml +70 -0
- endoreg_db/data/medication_indication/anticoagulation.yaml +115 -0
- endoreg_db/data/medication_indication_type/data.yaml +11 -0
- endoreg_db/data/medication_indication_type/thrombembolism.yaml +41 -0
- endoreg_db/data/medication_intake_time/base.yaml +31 -0
- endoreg_db/data/medication_schedule/apixaban.yaml +95 -0
- endoreg_db/data/medication_schedule/ass.yaml +12 -0
- endoreg_db/data/medication_schedule/enoxaparin.yaml +26 -0
- endoreg_db/data/names_first/first_names.yaml +54 -0
- endoreg_db/data/names_last/last_names.yaml +51 -0
- endoreg_db/data/network_device/data.yaml +59 -0
- endoreg_db/data/network_device_type/data.yaml +12 -0
- endoreg_db/data/organ/data.yaml +29 -0
- endoreg_db/data/patient_lab_sample_type/generic.yaml +6 -0
- endoreg_db/data/pdf_type/data.yaml +46 -0
- endoreg_db/data/product/green_endoscopy_dashboard_Product.yaml +66 -0
- endoreg_db/data/product_group/green_endoscopy_dashboard_ProductGroup.yaml +33 -0
- endoreg_db/data/product_material/green_endoscopy_dashboard_ProductMaterial.yaml +308 -0
- endoreg_db/data/product_weight/green_endoscopy_dashboard_ProductWeight.yaml +88 -0
- endoreg_db/data/profession/data.yaml +70 -0
- endoreg_db/data/qualification/endoscopy.yaml +36 -0
- endoreg_db/data/qualification/m2.yaml +39 -0
- endoreg_db/data/qualification/outpatient_clinic.yaml +35 -0
- endoreg_db/data/qualification/sonography.yaml +36 -0
- endoreg_db/data/qualification_type/base.yaml +29 -0
- endoreg_db/data/reference_product/green_endoscopy_dashboard_ReferenceProduct.yaml +55 -0
- endoreg_db/data/report_reader_flag/rkh-histology-generic.yaml +10 -0
- endoreg_db/data/report_reader_flag/ukw-examination-generic.yaml +30 -0
- endoreg_db/data/report_reader_flag/ukw-histology-generic.yaml +24 -0
- endoreg_db/data/requirement/01_patient_data.yaml +93 -0
- endoreg_db/data/requirement/old/colon_polyp_intervention.yaml +49 -0
- endoreg_db/data/requirement/old/colonoscopy_baseline_austria.yaml +45 -0
- endoreg_db/data/requirement/old/coloreg_colon_polyp.yaml +49 -0
- endoreg_db/data/requirement/old/disease_cardiovascular.yaml +79 -0
- endoreg_db/data/requirement/old/disease_classification_choice_cardiovascular.yaml +41 -0
- endoreg_db/data/requirement/old/disease_hepatology.yaml +12 -0
- endoreg_db/data/requirement/old/disease_misc.yaml +12 -0
- endoreg_db/data/requirement/old/disease_renal.yaml +96 -0
- endoreg_db/data/requirement/old/endoscopy_bleeding_risk.yaml +59 -0
- endoreg_db/data/requirement/old/event_cardiology.yaml +251 -0
- endoreg_db/data/requirement/old/event_requirements.yaml +145 -0
- endoreg_db/data/requirement/old/finding_colon_polyp.yaml +50 -0
- endoreg_db/data/requirement/old/gender.yaml +0 -0
- endoreg_db/data/requirement/old/lab_value.yaml +441 -0
- endoreg_db/data/requirement/old/medication.yaml +93 -0
- endoreg_db/data/requirement_operator/_old/age.yaml +13 -0
- endoreg_db/data/requirement_operator/_old/lab_operators.yaml +129 -0
- endoreg_db/data/requirement_operator/_old/model_operators.yaml +96 -0
- endoreg_db/data/requirement_operator/new_operators.yaml +36 -0
- endoreg_db/data/requirement_set/01_endoscopy_generic.yaml +65 -0
- endoreg_db/data/requirement_set/01_laboratory.yaml +13 -0
- endoreg_db/data/requirement_set/02_endoscopy_bleeding_risk.yaml +46 -0
- endoreg_db/data/requirement_set/90_coloreg.yaml +190 -0
- endoreg_db/data/requirement_set/_old_ +109 -0
- endoreg_db/data/requirement_set/colonoscopy_austria_screening.yaml +57 -0
- endoreg_db/data/requirement_set_type/data.yaml +41 -0
- endoreg_db/data/requirement_type/requirement_types.yaml +165 -0
- endoreg_db/data/resource/green_endoscopy_dashboard_Resource.yaml +15 -0
- endoreg_db/data/risk/bleeding.yaml +26 -0
- endoreg_db/data/risk/thrombosis.yaml +37 -0
- endoreg_db/data/risk_type/data.yaml +27 -0
- endoreg_db/data/setup_config.yaml +38 -0
- endoreg_db/data/shift/endoscopy.yaml +21 -0
- endoreg_db/data/shift/m2.yaml +0 -0
- endoreg_db/data/shift_type/base.yaml +35 -0
- endoreg_db/data/tag/requirement_set_tags.yaml +32 -0
- endoreg_db/data/tmp/chronic_kidney_disease.yaml +0 -0
- endoreg_db/data/tmp/congestive_heart_failure.yaml +0 -0
- endoreg_db/data/transport_route/green_endoscopy_dashboard_TransportRoute.yaml +12 -0
- endoreg_db/data/unit/concentration.yaml +115 -0
- endoreg_db/data/unit/data.yaml +17 -0
- endoreg_db/data/unit/length.yaml +31 -0
- endoreg_db/data/unit/misc.yaml +20 -0
- endoreg_db/data/unit/rate.yaml +6 -0
- endoreg_db/data/unit/time.yaml +48 -0
- endoreg_db/data/unit/volume.yaml +35 -0
- endoreg_db/data/unit/weight.yaml +38 -0
- endoreg_db/data/waste/data.yaml +12 -0
- endoreg_db/exceptions.py +24 -0
- endoreg_db/export/frames/export.py +6 -0
- endoreg_db/export/frames/export_frames_with_labels.py +616 -0
- endoreg_db/factories/__init__.py +0 -0
- endoreg_db/forms/__init__.py +4 -0
- endoreg_db/forms/examination_form.py +12 -0
- endoreg_db/forms/patient_finding_intervention_form.py +40 -0
- endoreg_db/forms/patient_form.py +23 -0
- endoreg_db/forms/questionnaires/__init__.py +1 -0
- endoreg_db/forms/questionnaires/tto_questionnaire.py +23 -0
- endoreg_db/forms/settings/__init__.py +11 -0
- endoreg_db/forms/unit.py +7 -0
- endoreg_db/helpers/__init__.py +0 -0
- endoreg_db/helpers/count_db.py +48 -0
- endoreg_db/helpers/data_loader.py +280 -0
- endoreg_db/helpers/default_objects.py +414 -0
- endoreg_db/helpers/download_segmentation_model.py +32 -0
- endoreg_db/helpers/interact.py +1 -0
- endoreg_db/helpers/test_video_helper.py +127 -0
- endoreg_db/import_files/__init__.py +27 -0
- endoreg_db/import_files/context/__init__.py +7 -0
- endoreg_db/import_files/context/default_sensitive_meta.py +83 -0
- endoreg_db/import_files/context/ensure_center.py +17 -0
- endoreg_db/import_files/context/file_lock.py +66 -0
- endoreg_db/import_files/context/import_context.py +42 -0
- endoreg_db/import_files/context/validate_directories.py +57 -0
- endoreg_db/import_files/file_storage/__init__.py +15 -0
- endoreg_db/import_files/file_storage/create_report_file.py +99 -0
- endoreg_db/import_files/file_storage/create_video_file.py +104 -0
- endoreg_db/import_files/file_storage/sensitive_meta_storage.py +42 -0
- endoreg_db/import_files/file_storage/state_management.py +463 -0
- endoreg_db/import_files/file_storage/storage.py +42 -0
- endoreg_db/import_files/import_service.md +26 -0
- endoreg_db/import_files/processing/__init__.py +11 -0
- endoreg_db/import_files/processing/report_processing/report_anonymization.py +99 -0
- endoreg_db/import_files/processing/sensitive_meta_adapter.py +51 -0
- endoreg_db/import_files/processing/video_processing/video_anonymization.py +107 -0
- endoreg_db/import_files/pseudonymization/__init__.py +0 -0
- endoreg_db/import_files/pseudonymization/fake.py +52 -0
- endoreg_db/import_files/pseudonymization/k_anonymity.py +181 -0
- endoreg_db/import_files/pseudonymization/k_pseudonymity.py +139 -0
- endoreg_db/import_files/pseudonymization/pseudonymize.py +0 -0
- endoreg_db/import_files/report_import_service.py +147 -0
- endoreg_db/import_files/video_import_service.py +154 -0
- endoreg_db/logger_conf.py +156 -0
- endoreg_db/management/__init__.py +1 -0
- endoreg_db/management/commands/__init__.py +1 -0
- endoreg_db/management/commands/anonymize_video.py +0 -0
- endoreg_db/management/commands/check_auth.py +132 -0
- endoreg_db/management/commands/create_model_meta_from_huggingface.py +177 -0
- endoreg_db/management/commands/create_multilabel_model_meta.py +419 -0
- endoreg_db/management/commands/export_frame_annot.py +196 -0
- endoreg_db/management/commands/fix_missing_patient_data.py +206 -0
- endoreg_db/management/commands/fix_video_paths.py +186 -0
- endoreg_db/management/commands/import_report.py +361 -0
- endoreg_db/management/commands/list_routes.py +20 -0
- endoreg_db/management/commands/load_ai_model_data.py +83 -0
- endoreg_db/management/commands/load_ai_model_label_data.py +60 -0
- endoreg_db/management/commands/load_base_db_data.py +63 -0
- endoreg_db/management/commands/load_center_data.py +68 -0
- endoreg_db/management/commands/load_contraindication_data.py +39 -0
- endoreg_db/management/commands/load_disease_classification_choices_data.py +38 -0
- endoreg_db/management/commands/load_disease_classification_data.py +38 -0
- endoreg_db/management/commands/load_disease_data.py +59 -0
- endoreg_db/management/commands/load_distribution_data.py +63 -0
- endoreg_db/management/commands/load_endoscope_data.py +58 -0
- endoreg_db/management/commands/load_event_data.py +39 -0
- endoreg_db/management/commands/load_examination_data.py +78 -0
- endoreg_db/management/commands/load_examination_indication_data.py +85 -0
- endoreg_db/management/commands/load_finding_data.py +115 -0
- endoreg_db/management/commands/load_gender_data.py +37 -0
- endoreg_db/management/commands/load_green_endoscopy_wuerzburg_data.py +142 -0
- endoreg_db/management/commands/load_information_source.py +46 -0
- endoreg_db/management/commands/load_lab_value_data.py +52 -0
- endoreg_db/management/commands/load_legacy_data.py +303 -0
- endoreg_db/management/commands/load_medication_data.py +104 -0
- endoreg_db/management/commands/load_name_data.py +36 -0
- endoreg_db/management/commands/load_organ_data.py +39 -0
- endoreg_db/management/commands/load_pdf_type_data.py +58 -0
- endoreg_db/management/commands/load_profession_data.py +40 -0
- endoreg_db/management/commands/load_qualification_data.py +56 -0
- endoreg_db/management/commands/load_report_reader_flag_data.py +40 -0
- endoreg_db/management/commands/load_requirement_data.py +207 -0
- endoreg_db/management/commands/load_requirement_set_tags.py +95 -0
- endoreg_db/management/commands/load_risk_data.py +57 -0
- endoreg_db/management/commands/load_shift_data.py +57 -0
- endoreg_db/management/commands/load_tag_data.py +54 -0
- endoreg_db/management/commands/load_unit_data.py +40 -0
- endoreg_db/management/commands/load_user_groups.py +26 -0
- endoreg_db/management/commands/model_input.py +169 -0
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- endoreg_db/utils/check_video_files.py +175 -0
- endoreg_db/utils/cropping.py +30 -0
- endoreg_db/utils/dataloader.py +285 -0
- endoreg_db/utils/dates.py +59 -0
- endoreg_db/utils/defaults/set_default_center.py +33 -0
- endoreg_db/utils/env.py +37 -0
- endoreg_db/utils/extract_specific_frames.py +87 -0
- endoreg_db/utils/file_operations.py +70 -0
- endoreg_db/utils/fix_video_path_direct.py +157 -0
- endoreg_db/utils/frame_anonymization_utils.py +463 -0
- endoreg_db/utils/hashs.py +138 -0
- endoreg_db/utils/links/__init__.py +0 -0
- endoreg_db/utils/links/requirement_link.py +237 -0
- endoreg_db/utils/mime_types.py +0 -0
- endoreg_db/utils/names.py +82 -0
- endoreg_db/utils/ocr.py +195 -0
- endoreg_db/utils/operation_log.py +87 -0
- endoreg_db/utils/parse_and_generate_yaml.py +45 -0
- endoreg_db/utils/paths.py +159 -0
- endoreg_db/utils/permissions.py +160 -0
- endoreg_db/utils/pipelines/Readme.md +235 -0
- endoreg_db/utils/pipelines/__init__.py +0 -0
- endoreg_db/utils/pipelines/process_video_dir.py +144 -0
- endoreg_db/utils/product/__init__.py +0 -0
- endoreg_db/utils/product/sum_emissions.py +22 -0
- endoreg_db/utils/product/sum_weights.py +20 -0
- endoreg_db/utils/pydantic_models/__init__.py +5 -0
- endoreg_db/utils/pydantic_models/db_config.py +57 -0
- endoreg_db/utils/requirement_helpers.py +0 -0
- endoreg_db/utils/requirement_operator_logic/__init__.py +0 -0
- endoreg_db/utils/requirement_operator_logic/_old/lab_value_operators.py +678 -0
- endoreg_db/utils/requirement_operator_logic/_old/model_evaluators.py +842 -0
- endoreg_db/utils/requirement_operator_logic/new_operator_logic.py +114 -0
- endoreg_db/utils/setup_config.py +196 -0
- endoreg_db/utils/storage.py +117 -0
- endoreg_db/utils/translation.py +31 -0
- endoreg_db/utils/uuid.py +5 -0
- endoreg_db/utils/validate_endo_roi.py +33 -0
- endoreg_db/utils/validate_subcategory_dict.py +93 -0
- endoreg_db/utils/validate_video_detailed.py +415 -0
- endoreg_db/utils/video/__init__.py +30 -0
- endoreg_db/utils/video/extract_frames.py +100 -0
- endoreg_db/utils/video/ffmpeg_wrapper.py +996 -0
- endoreg_db/utils/video/names.py +47 -0
- endoreg_db/utils/video/streaming_processor.py +386 -0
- endoreg_db/utils/video/video_splitter.py +105 -0
- endoreg_db/versioning.md +79 -0
- endoreg_db/views/Frames_NICE_and_PARIS_classifications_views.py +247 -0
- endoreg_db/views/__init__.py +157 -0
- endoreg_db/views/anonymization/__init__.py +31 -0
- endoreg_db/views/anonymization/media_management.py +486 -0
- endoreg_db/views/anonymization/overview.py +307 -0
- endoreg_db/views/anonymization/validate.py +310 -0
- endoreg_db/views/auth/__init__.py +13 -0
- endoreg_db/views/auth/keycloak.py +146 -0
- endoreg_db/views/examination/__init__.py +30 -0
- endoreg_db/views/examination/examination.py +37 -0
- endoreg_db/views/examination/examination_manifest_cache.py +26 -0
- endoreg_db/views/examination/get_finding_classification_choices.py +62 -0
- endoreg_db/views/examination/get_finding_classifications.py +38 -0
- endoreg_db/views/examination/get_findings.py +39 -0
- endoreg_db/views/examination/get_instruments.py +19 -0
- endoreg_db/views/examination/get_interventions.py +14 -0
- endoreg_db/views/finding/__init__.py +9 -0
- endoreg_db/views/finding/finding.py +116 -0
- endoreg_db/views/finding/get_classifications.py +14 -0
- endoreg_db/views/finding/get_interventions.py +17 -0
- endoreg_db/views/finding_classification/__init__.py +13 -0
- endoreg_db/views/finding_classification/base.py +0 -0
- endoreg_db/views/finding_classification/finding_classification.py +41 -0
- endoreg_db/views/finding_classification/get_classification_choices.py +54 -0
- endoreg_db/views/media/__init__.py +32 -0
- endoreg_db/views/media/pdf_media.py +411 -0
- endoreg_db/views/media/sensitive_metadata.py +372 -0
- endoreg_db/views/media/video_media.py +275 -0
- endoreg_db/views/meta/__init__.py +7 -0
- endoreg_db/views/meta/sensitive_meta_list.py +102 -0
- endoreg_db/views/meta/sensitive_meta_verification.py +74 -0
- endoreg_db/views/misc/__init__.py +29 -0
- endoreg_db/views/misc/center.py +14 -0
- endoreg_db/views/misc/csrf.py +8 -0
- endoreg_db/views/misc/gender.py +15 -0
- endoreg_db/views/misc/stats.py +255 -0
- endoreg_db/views/misc/upload_views.py +241 -0
- endoreg_db/views/patient/__init__.py +3 -0
- endoreg_db/views/patient/patient.py +253 -0
- endoreg_db/views/patient_examination/__init__.py +11 -0
- endoreg_db/views/patient_examination/patient_examination.py +141 -0
- endoreg_db/views/patient_examination/patient_examination_create.py +58 -0
- endoreg_db/views/patient_examination/patient_examination_detail.py +63 -0
- endoreg_db/views/patient_examination/patient_examination_list.py +72 -0
- endoreg_db/views/patient_examination/video.py +228 -0
- endoreg_db/views/patient_finding/__init__.py +7 -0
- endoreg_db/views/patient_finding/base.py +0 -0
- endoreg_db/views/patient_finding/patient_finding.py +71 -0
- endoreg_db/views/patient_finding/patient_finding_optimized.py +291 -0
- endoreg_db/views/patient_finding_classification/__init__.py +5 -0
- endoreg_db/views/patient_finding_classification/pfc_create.py +75 -0
- endoreg_db/views/report/__init__.py +7 -0
- endoreg_db/views/report/reimport.py +177 -0
- endoreg_db/views/report/report_stream.py +191 -0
- endoreg_db/views/requirement/__init__.py +11 -0
- endoreg_db/views/requirement/evaluate.py +278 -0
- endoreg_db/views/requirement/lookup.py +380 -0
- endoreg_db/views/requirement/lookup_store.py +183 -0
- endoreg_db/views/requirement/requirement_utils.py +87 -0
- endoreg_db/views/requirement_lookup/lookup.py +0 -0
- endoreg_db/views/requirement_lookup/lookup_store.py +0 -0
- endoreg_db/views/stats/__init__.py +13 -0
- endoreg_db/views/stats/stats_views.py +266 -0
- endoreg_db/views/video/__init__.py +49 -0
- endoreg_db/views/video/ai/__init__.py +8 -0
- endoreg_db/views/video/ai/label.py +159 -0
- endoreg_db/views/video/correction.py +529 -0
- endoreg_db/views/video/reimport.py +230 -0
- endoreg_db/views/video/segments_crud.py +709 -0
- endoreg_db/views/video/video_apply_mask.py +49 -0
- endoreg_db/views/video/video_correction.py +22 -0
- endoreg_db/views/video/video_download_processed.py +58 -0
- endoreg_db/views/video/video_examination_viewset.py +242 -0
- endoreg_db/views/video/video_metadata.py +101 -0
- endoreg_db/views/video/video_processing_history.py +25 -0
- endoreg_db/views/video/video_remove_frames.py +49 -0
- endoreg_db/views/video/video_stream.py +334 -0
- endoreg_db-0.8.9.32.dist-info/METADATA +404 -0
- endoreg_db-0.8.9.32.dist-info/RECORD +787 -0
- endoreg_db-0.8.9.32.dist-info/WHEEL +4 -0
- endoreg_db-0.8.9.32.dist-info/licenses/LICENSE +674 -0
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"""
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Video Correction API Views
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Provides endpoints for video analysis, masking, frame removal, and processing history.
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Created as part of Phase 1.1: Video Correction API Endpoints.
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Available Functions from lx_anonymizer (already implemented):
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- FrameCleaner.analyze_video_sensitivity() - Frame analysis
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- FrameCleaner.clean_video() - Complete anonymization
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- FrameCleaner._mask_video() - FFmpeg masking
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- FrameCleaner.remove_frames_from_video() - Frame removal
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- VideoImportService._get_processor_roi_info() - ROI extraction
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"""
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import json
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import logging
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from pathlib import Path
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from django.conf import settings
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from django.shortcuts import get_object_or_404
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from lx_anonymizer import FrameCleaner
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from rest_framework import status
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from rest_framework.response import Response
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from rest_framework.views import APIView
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from endoreg_db.models import (
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LabelVideoSegment,
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VideoFile,
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VideoMetadata,
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VideoProcessingHistory,
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)
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from endoreg_db.serializers import VideoMetaSerializer, VideoProcessingHistorySerializer
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from endoreg_db.serializers.video.video_file_detail import VideoDetailSerializer
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from endoreg_db.utils.paths import ANONYM_VIDEO_DIR
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from endoreg_db.utils.permissions import EnvironmentAwarePermission
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logger = logging.getLogger(__name__)
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def update_processed_file(video, output_path: Path):
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try:
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rel_path = output_path.relative_to(ANONYM_VIDEO_DIR)
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except ValueError:
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rel_path = output_path.relative_to(Path(settings.MEDIA_ROOT))
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video.processed_file.name = str(rel_path)
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video.save(update_fields=["processed_file"])
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class VideoCorrectionView(APIView):
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"""
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GET /api/video/media/video-correction/{id}/ - Get video details for correction
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"""
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permission_classes = [EnvironmentAwarePermission]
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def get(self, request, pk):
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video = get_object_or_404(VideoFile, pk=pk)
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ser = VideoDetailSerializer(video, context={"request": request})
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return Response(ser.data, status=status.HTTP_200_OK)
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def update_segments_after_frame_removal(video: VideoFile, removed_frames: list) -> dict:
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"""
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Update LabelVideoSegment frame boundaries after frame removal.
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This function shifts segment start/end frames based on which frames were removed.
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Segments are deleted if all their frames are removed.
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Args:
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video: VideoFile instance whose segments should be updated
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removed_frames: List of frame numbers that were removed (sorted)
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Returns:
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dict: {
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'segments_updated': int,
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'segments_deleted': int,
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'segments_unchanged': int
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}
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Algorithm:
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For each segment:
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1. Count frames removed before segment → shift start_frame
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2. Count frames removed within segment → shift end_frame
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3. Delete segment if start_frame >= end_frame (all frames removed)
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Example:
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Original segment: frames 100-200
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Removed frames: [50, 75, 120, 150, 180]
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Frames before segment (< 100): 2 frames (50, 75)
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Frames within segment (100-200): 3 frames (120, 150, 180)
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New segment: frames (100-2) to (200-2-3) = 98-195
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"""
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if not removed_frames:
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return {"segments_updated": 0, "segments_deleted": 0, "segments_unchanged": 0}
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removed_frames = sorted(set(removed_frames)) # Ensure sorted and unique
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segments = LabelVideoSegment.objects.filter(video_file=video).order_by(
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"start_frame_number"
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)
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segments_updated = 0
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segments_deleted = 0
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segments_unchanged = 0
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for segment in segments:
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original_start = segment.start_frame_number
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original_end = segment.end_frame_number
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# Count frames removed before this segment
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frames_before = sum(1 for f in removed_frames if f < original_start)
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# Count frames removed within this segment
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frames_within = sum(
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1 for f in removed_frames if original_start <= f <= original_end
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)
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# Calculate new boundaries
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new_start = original_start - frames_before
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new_end = original_end - frames_before - frames_within
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# Delete segment if all frames were removed
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if new_start >= new_end:
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logger.info(
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f"Deleting segment {segment.pk} (original: {original_start}-{original_end}) "
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f"- all {frames_within} frames removed"
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)
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segment.delete()
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segments_deleted += 1
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elif new_start != original_start or new_end != original_end:
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# Update segment boundaries
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logger.info(
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f"Updating segment {segment.pk}: "
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f"{original_start}-{original_end} → {new_start}-{new_end} "
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f"(before: {frames_before}, within: {frames_within})"
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)
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segment.start_frame_number = new_start
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segment.end_frame_number = new_end
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segment.save(update_fields=["start_frame_number", "end_frame_number"])
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segments_updated += 1
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else:
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# No change needed
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segments_unchanged += 1
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logger.info(
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f"Segment update complete for video {video.pk}: "
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f"{segments_updated} updated, {segments_deleted} deleted, {segments_unchanged} unchanged"
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)
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return {
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"segments_updated": segments_updated,
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"segments_deleted": segments_deleted,
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"segments_unchanged": segments_unchanged,
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}
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class VideoProcessingHistoryView(APIView):
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"""
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GET /api/media/videos/{pk}/processing-history/
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Retrieve processing history for a video.
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Returns list of processing operations:
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[
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{
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"id": 1,
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"video": 123,
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"operation": "mask_overlay",
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"operation_display": "Mask Overlay",
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"status": "success",
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"status_display": "Success",
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"config": {"mask_type": "device", "device_name": "olympus"},
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"output_file": "/path/to/masked_video.mp4",
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"download_url": "/api/media/processed-videos/123/1/",
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"details": "",
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"task_id": "abc-123-def",
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"created_at": "2025-10-09T10:00:00Z",
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"completed_at": "2025-10-09T10:05:00Z",
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"duration": 300.5,
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"is_complete": true
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},
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...
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]
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"""
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def get(self, request, pk):
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"""Get processing history for a video."""
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video = get_object_or_404(VideoFile, pk=pk)
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# Get all history records, newest first
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history = VideoProcessingHistory.objects.filter(video=video).order_by(
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"-created_at"
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)
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serializer = VideoProcessingHistorySerializer(
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history, many=True, context={"request": request}
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)
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return Response(serializer.data)
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class VideoApplyMaskView(APIView):
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"""
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POST /api/media/videos/{pk}/apply-mask/
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Apply device mask or custom ROI mask to video.
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Request body:
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{
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"mask_type": "device", // or "custom"
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"device_name": "olympus", // required if mask_type=device
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"roi": { // required if mask_type=custom
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"x": 550,
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|
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"y": 0,
|
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217
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"width": 1350,
|
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|
+
"height": 1080
|
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219
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+
},
|
|
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|
+
"processing_method": "streaming" // or "direct" (default: streaming)
|
|
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|
+
}
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|
222
|
+
|
|
223
|
+
Returns:
|
|
224
|
+
{
|
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225
|
+
"task_id": "abc-123-def", // Celery task ID (future)
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|
+
"output_file": "/path/to/masked_video.mp4",
|
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|
+
"message": "Masking complete",
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228
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+
"processing_time": 125.5
|
|
229
|
+
}
|
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230
|
+
|
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231
|
+
Note: Currently synchronous. Will be converted to Celery task in Phase 1.2.
|
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|
+
"""
|
|
233
|
+
|
|
234
|
+
def post(self, request, pk):
|
|
235
|
+
"""Apply masking to video."""
|
|
236
|
+
video = get_object_or_404(VideoFile, pk=pk)
|
|
237
|
+
|
|
238
|
+
# Extract parameters
|
|
239
|
+
mask_type = request.data.get("mask_type", "device")
|
|
240
|
+
device_name = request.data.get("device_name")
|
|
241
|
+
roi = request.data.get("roi")
|
|
242
|
+
processing_method = request.data.get("processing_method", "streaming")
|
|
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|
+
|
|
244
|
+
# Validate required parameters
|
|
245
|
+
if mask_type == "device" and not device_name:
|
|
246
|
+
return Response(
|
|
247
|
+
{"error": "device_name required for device mask"},
|
|
248
|
+
status=status.HTTP_400_BAD_REQUEST,
|
|
249
|
+
)
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|
250
|
+
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|
251
|
+
if mask_type == "custom" and not roi:
|
|
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|
+
return Response(
|
|
253
|
+
{"error": "roi required for custom mask"},
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|
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+
status=status.HTTP_400_BAD_REQUEST,
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|
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|
+
)
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|
256
|
+
|
|
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|
+
# Create processing history record
|
|
258
|
+
history = VideoProcessingHistory.objects.create(
|
|
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|
+
video=video,
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|
260
|
+
operation=VideoProcessingHistory.OPERATION_MASKING,
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|
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|
+
status=VideoProcessingHistory.STATUS_PENDING,
|
|
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|
+
config={
|
|
263
|
+
"mask_type": mask_type,
|
|
264
|
+
"device_name": device_name,
|
|
265
|
+
"roi": roi,
|
|
266
|
+
"processing_method": processing_method,
|
|
267
|
+
},
|
|
268
|
+
)
|
|
269
|
+
|
|
270
|
+
try:
|
|
271
|
+
history.mark_running()
|
|
272
|
+
|
|
273
|
+
# Initialize FrameCleaner
|
|
274
|
+
frame_cleaner = FrameCleaner()
|
|
275
|
+
|
|
276
|
+
# Get video paths
|
|
277
|
+
video_path = (
|
|
278
|
+
Path(video.raw_file.path)
|
|
279
|
+
if hasattr(video.raw_file, "path")
|
|
280
|
+
else Path(str(video.raw_file))
|
|
281
|
+
)
|
|
282
|
+
output_path = video.get_output_path()
|
|
283
|
+
output_path.parent.mkdir(parents=True, exist_ok=True)
|
|
284
|
+
|
|
285
|
+
# Load or create mask config
|
|
286
|
+
if mask_type == "device":
|
|
287
|
+
# Load device-specific mask from lx_anonymizer/masks/
|
|
288
|
+
mask_config = frame_cleaner._load_mask(device_name)
|
|
289
|
+
else: # custom
|
|
290
|
+
# Convert ROI to mask config
|
|
291
|
+
mask_config = frame_cleaner._create_mask_config_from_roi(
|
|
292
|
+
endoscope_roi=roi,
|
|
293
|
+
)
|
|
294
|
+
|
|
295
|
+
# Apply mask (uses existing FrameCleaner._mask_video)
|
|
296
|
+
import time
|
|
297
|
+
|
|
298
|
+
start_time = time.time()
|
|
299
|
+
|
|
300
|
+
success = frame_cleaner._mask_video(
|
|
301
|
+
input_video=video_path,
|
|
302
|
+
mask_config=mask_config,
|
|
303
|
+
output_video=output_path,
|
|
304
|
+
)
|
|
305
|
+
|
|
306
|
+
processing_time = time.time() - start_time
|
|
307
|
+
|
|
308
|
+
if success:
|
|
309
|
+
# Update video record with anonymized file
|
|
310
|
+
|
|
311
|
+
processed_file_path = output_path
|
|
312
|
+
update_processed_file(video, processed_file_path)
|
|
313
|
+
# Mark history as success
|
|
314
|
+
history.mark_success(
|
|
315
|
+
output_file=str(output_path),
|
|
316
|
+
details=f"Masking completed in {processing_time:.1f}s",
|
|
317
|
+
)
|
|
318
|
+
|
|
319
|
+
logger.info(f"Video {pk} masked successfully: {output_path}")
|
|
320
|
+
|
|
321
|
+
return Response(
|
|
322
|
+
{
|
|
323
|
+
"task_id": None, # Will be Celery task ID in Phase 1.2
|
|
324
|
+
"output_file": str(output_path),
|
|
325
|
+
"message": "Masking complete",
|
|
326
|
+
"processing_time": processing_time,
|
|
327
|
+
}
|
|
328
|
+
)
|
|
329
|
+
else:
|
|
330
|
+
raise Exception("Masking failed - check FFmpeg logs")
|
|
331
|
+
|
|
332
|
+
except Exception as e:
|
|
333
|
+
logger.error(f"Video masking failed for {pk}: {str(e)}", exc_info=True)
|
|
334
|
+
|
|
335
|
+
history.mark_failure(str(e))
|
|
336
|
+
|
|
337
|
+
return Response(
|
|
338
|
+
{"error": f"Masking failed: {str(e)}"},
|
|
339
|
+
status=status.HTTP_500_INTERNAL_SERVER_ERROR,
|
|
340
|
+
)
|
|
341
|
+
|
|
342
|
+
|
|
343
|
+
class VideoRemoveFramesView(APIView):
|
|
344
|
+
"""
|
|
345
|
+
POST /api/media/videos/{pk}/remove-frames/
|
|
346
|
+
|
|
347
|
+
Remove specified frames from video.
|
|
348
|
+
|
|
349
|
+
Request body:
|
|
350
|
+
{
|
|
351
|
+
"frame_list": [10, 15, 20, 30], // explicit frame numbers
|
|
352
|
+
// OR
|
|
353
|
+
"frame_ranges": "10-20,30,45-50", // range string
|
|
354
|
+
// OR
|
|
355
|
+
"detection_method": "automatic", // use analysis results
|
|
356
|
+
|
|
357
|
+
"processing_method": "streaming" // or "traditional"
|
|
358
|
+
}
|
|
359
|
+
|
|
360
|
+
Returns:
|
|
361
|
+
{
|
|
362
|
+
"task_id": "abc-123-def",
|
|
363
|
+
"output_file": "/path/to/cleaned_video.mp4",
|
|
364
|
+
"frames_removed": 42,
|
|
365
|
+
"message": "Frame removal complete",
|
|
366
|
+
"processing_time": 180.3
|
|
367
|
+
}
|
|
368
|
+
|
|
369
|
+
Note: Currently synchronous. Will be converted to Celery task in Phase 1.2.
|
|
370
|
+
"""
|
|
371
|
+
|
|
372
|
+
def post(self, request, pk):
|
|
373
|
+
"""Remove frames from video."""
|
|
374
|
+
video = get_object_or_404(VideoFile, pk=pk)
|
|
375
|
+
|
|
376
|
+
# Extract parameters
|
|
377
|
+
frame_list = request.data.get("frame_list")
|
|
378
|
+
frame_ranges = request.data.get("frame_ranges")
|
|
379
|
+
detection_method = request.data.get("detection_method")
|
|
380
|
+
processing_method = request.data.get("processing_method", "streaming")
|
|
381
|
+
|
|
382
|
+
# Determine frames to remove
|
|
383
|
+
frames_to_remove = []
|
|
384
|
+
|
|
385
|
+
if frame_list:
|
|
386
|
+
frames_to_remove = frame_list
|
|
387
|
+
elif frame_ranges:
|
|
388
|
+
frames_to_remove = self._parse_frame_ranges(frame_ranges)
|
|
389
|
+
elif detection_method == "automatic":
|
|
390
|
+
# Use existing analysis results
|
|
391
|
+
try:
|
|
392
|
+
metadata = VideoMetadata.objects.get(video=video)
|
|
393
|
+
if metadata.sensitive_frame_ids:
|
|
394
|
+
frames_to_remove = json.loads(metadata.sensitive_frame_ids)
|
|
395
|
+
else:
|
|
396
|
+
return Response(
|
|
397
|
+
{"error": "No analysis results available. Run analysis first."},
|
|
398
|
+
status=status.HTTP_400_BAD_REQUEST,
|
|
399
|
+
)
|
|
400
|
+
except VideoMetadata.DoesNotExist:
|
|
401
|
+
return Response(
|
|
402
|
+
{"error": "Video not analyzed. Run analysis first."},
|
|
403
|
+
status=status.HTTP_400_BAD_REQUEST,
|
|
404
|
+
)
|
|
405
|
+
else:
|
|
406
|
+
return Response(
|
|
407
|
+
{
|
|
408
|
+
"error": "Must provide frame_list, frame_ranges, or detection_method=automatic"
|
|
409
|
+
},
|
|
410
|
+
status=status.HTTP_400_BAD_REQUEST,
|
|
411
|
+
)
|
|
412
|
+
|
|
413
|
+
if not frames_to_remove:
|
|
414
|
+
return Response(
|
|
415
|
+
{"error": "No frames to remove"}, status=status.HTTP_400_BAD_REQUEST
|
|
416
|
+
)
|
|
417
|
+
|
|
418
|
+
# Create processing history record
|
|
419
|
+
history = VideoProcessingHistory.objects.create(
|
|
420
|
+
video=video,
|
|
421
|
+
operation=VideoProcessingHistory.OPERATION_FRAME_REMOVAL,
|
|
422
|
+
status=VideoProcessingHistory.STATUS_PENDING,
|
|
423
|
+
config={
|
|
424
|
+
"frames_to_remove": frames_to_remove,
|
|
425
|
+
"frame_count": len(frames_to_remove),
|
|
426
|
+
"processing_method": processing_method,
|
|
427
|
+
},
|
|
428
|
+
)
|
|
429
|
+
|
|
430
|
+
try:
|
|
431
|
+
history.mark_running()
|
|
432
|
+
|
|
433
|
+
# Initialize FrameCleaner
|
|
434
|
+
frame_cleaner = FrameCleaner()
|
|
435
|
+
|
|
436
|
+
# Get video paths
|
|
437
|
+
video_path = (
|
|
438
|
+
Path(video.raw_file.path)
|
|
439
|
+
if hasattr(video.raw_file, "path")
|
|
440
|
+
else Path(str(video.raw_file))
|
|
441
|
+
)
|
|
442
|
+
output_path = (
|
|
443
|
+
Path(settings.MEDIA_ROOT)
|
|
444
|
+
/ "anonym_videos"
|
|
445
|
+
/ f"{video.video_hash}_cleaned.mp4"
|
|
446
|
+
)
|
|
447
|
+
output_path.parent.mkdir(parents=True, exist_ok=True)
|
|
448
|
+
|
|
449
|
+
# Remove frames (uses existing FrameCleaner.remove_frames_from_video)
|
|
450
|
+
import time
|
|
451
|
+
|
|
452
|
+
start_time = time.time()
|
|
453
|
+
|
|
454
|
+
success = frame_cleaner.remove_frames_from_video(
|
|
455
|
+
original_video=video_path,
|
|
456
|
+
frames_to_remove=frames_to_remove,
|
|
457
|
+
output_video=output_path,
|
|
458
|
+
)
|
|
459
|
+
|
|
460
|
+
processing_time = time.time() - start_time
|
|
461
|
+
|
|
462
|
+
if success:
|
|
463
|
+
# Update video record
|
|
464
|
+
update_processed_file(video, output_path)
|
|
465
|
+
|
|
466
|
+
# Phase 1.4: Update LabelVideoSegments (shift frame numbers)
|
|
467
|
+
segment_update_result = update_segments_after_frame_removal(
|
|
468
|
+
video, frames_to_remove
|
|
469
|
+
)
|
|
470
|
+
|
|
471
|
+
# Mark history as success with segment update info
|
|
472
|
+
details_parts = [
|
|
473
|
+
f"Removed {len(frames_to_remove)} frames in {processing_time:.1f}s"
|
|
474
|
+
]
|
|
475
|
+
if segment_update_result["segments_updated"] > 0:
|
|
476
|
+
details_parts.append(
|
|
477
|
+
f"Updated {segment_update_result['segments_updated']} segments"
|
|
478
|
+
)
|
|
479
|
+
if segment_update_result["segments_deleted"] > 0:
|
|
480
|
+
details_parts.append(
|
|
481
|
+
f"Deleted {segment_update_result['segments_deleted']} segments (all frames removed)"
|
|
482
|
+
)
|
|
483
|
+
|
|
484
|
+
history.mark_success(
|
|
485
|
+
output_file=str(output_path), details="; ".join(details_parts)
|
|
486
|
+
)
|
|
487
|
+
|
|
488
|
+
logger.info(
|
|
489
|
+
f"Video {pk} cleaned: removed {len(frames_to_remove)} frames"
|
|
490
|
+
)
|
|
491
|
+
|
|
492
|
+
return Response(
|
|
493
|
+
{
|
|
494
|
+
"task_id": None, # Will be Celery task ID in Phase 1.2
|
|
495
|
+
"output_file": str(output_path),
|
|
496
|
+
"frames_removed": len(frames_to_remove),
|
|
497
|
+
"segment_updates": segment_update_result,
|
|
498
|
+
"message": "Frame removal complete",
|
|
499
|
+
"processing_time": processing_time,
|
|
500
|
+
}
|
|
501
|
+
)
|
|
502
|
+
else:
|
|
503
|
+
raise Exception("Frame removal failed - check FFmpeg logs")
|
|
504
|
+
|
|
505
|
+
except Exception as e:
|
|
506
|
+
logger.error(f"Frame removal failed for {pk}: {str(e)}", exc_info=True)
|
|
507
|
+
|
|
508
|
+
history.mark_failure(str(e))
|
|
509
|
+
|
|
510
|
+
return Response(
|
|
511
|
+
{"error": f"Frame removal failed: {str(e)}"},
|
|
512
|
+
status=status.HTTP_500_INTERNAL_SERVER_ERROR,
|
|
513
|
+
)
|
|
514
|
+
|
|
515
|
+
def _parse_frame_ranges(self, ranges_str: str) -> list:
|
|
516
|
+
"""
|
|
517
|
+
Parse frame ranges string to list of frame numbers.
|
|
518
|
+
|
|
519
|
+
Example: "10-20,30,45-50" -> [10,11,...,20,30,45,...,50]
|
|
520
|
+
"""
|
|
521
|
+
frames = []
|
|
522
|
+
for part in ranges_str.split(","):
|
|
523
|
+
part = part.strip()
|
|
524
|
+
if "-" in part:
|
|
525
|
+
start, end = map(int, part.split("-"))
|
|
526
|
+
frames.extend(range(start, end + 1))
|
|
527
|
+
else:
|
|
528
|
+
frames.append(int(part))
|
|
529
|
+
return sorted(set(frames)) # Remove duplicates and sort
|