endoreg-db 0.8.9.32__py3-none-any.whl

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  1. endoreg_db/__init__.py +0 -0
  2. endoreg_db/_version.py +34 -0
  3. endoreg_db/admin.py +97 -0
  4. endoreg_db/api/serializers/finding_descriptions.py +0 -0
  5. endoreg_db/api/views/finding_descriptions.py +0 -0
  6. endoreg_db/api_urls.py +4 -0
  7. endoreg_db/apps.py +17 -0
  8. endoreg_db/assets/dummy_model.ckpt +1 -0
  9. endoreg_db/authz/auth.py +78 -0
  10. endoreg_db/authz/backends.py +168 -0
  11. endoreg_db/authz/management/commands/list_routes.py +20 -0
  12. endoreg_db/authz/middleware.py +84 -0
  13. endoreg_db/authz/permissions.py +138 -0
  14. endoreg_db/authz/policy.py +224 -0
  15. endoreg_db/authz/settings.py +64 -0
  16. endoreg_db/authz/views_auth.py +70 -0
  17. endoreg_db/codemods/readme.md +88 -0
  18. endoreg_db/codemods/rename_datetime_fields.py +99 -0
  19. endoreg_db/config/__init__.py +0 -0
  20. endoreg_db/config/env.py +106 -0
  21. endoreg_db/config/settings/__init__.py +6 -0
  22. endoreg_db/config/settings/base.py +148 -0
  23. endoreg_db/config/settings/case_gen.py +32 -0
  24. endoreg_db/config/settings/dev.py +108 -0
  25. endoreg_db/config/settings/keycloak.py +177 -0
  26. endoreg_db/config/settings/prod.py +66 -0
  27. endoreg_db/config/settings/test.py +72 -0
  28. endoreg_db/data/__init__.py +135 -0
  29. endoreg_db/data/ai_model/data.yaml +7 -0
  30. endoreg_db/data/ai_model_label/label/data.yaml +88 -0
  31. endoreg_db/data/ai_model_label/label/polyp_classification.yaml +52 -0
  32. endoreg_db/data/ai_model_label/label-set/data.yaml +40 -0
  33. endoreg_db/data/ai_model_label/label-set/polyp_classifications.yaml +25 -0
  34. endoreg_db/data/ai_model_label/label-type/data.yaml +7 -0
  35. endoreg_db/data/ai_model_meta/default_multilabel_classification.yaml +27 -0
  36. endoreg_db/data/ai_model_type/data.yaml +7 -0
  37. endoreg_db/data/ai_model_video_segmentation_label/base_segmentation.yaml +176 -0
  38. endoreg_db/data/ai_model_video_segmentation_labelset/data.yaml +20 -0
  39. endoreg_db/data/case_template/rule/00_patient_lab_sample_add_default_value.yaml +167 -0
  40. endoreg_db/data/case_template/rule/01_patient-set-age.yaml +8 -0
  41. endoreg_db/data/case_template/rule/01_patient-set-gender.yaml +9 -0
  42. endoreg_db/data/case_template/rule/11_create_patient_lab_sample.yaml +23 -0
  43. endoreg_db/data/case_template/rule/12_create-patient_medication-anticoagulation.yaml +19 -0
  44. endoreg_db/data/case_template/rule/13_create-patient_medication_schedule-anticoagulation.yaml +19 -0
  45. endoreg_db/data/case_template/rule/19_create_patient.yaml +17 -0
  46. endoreg_db/data/case_template/rule_type/base_types.yaml +35 -0
  47. endoreg_db/data/case_template/rule_value/.init +0 -0
  48. endoreg_db/data/case_template/rule_value_type/base_types.yaml +59 -0
  49. endoreg_db/data/case_template/template/base.yaml +8 -0
  50. endoreg_db/data/case_template/template_type/pre_endoscopy.yaml +3 -0
  51. endoreg_db/data/case_template/tmp/_rule_value +13 -0
  52. endoreg_db/data/case_template/tmp/rule/01_atrial_fibrillation.yaml +21 -0
  53. endoreg_db/data/case_template/tmp/rule/02_create_object.yaml +10 -0
  54. endoreg_db/data/case_template/tmp/template/atrial_fibrillation_low_risk.yaml +7 -0
  55. endoreg_db/data/center/data.yaml +99 -0
  56. endoreg_db/data/center_resource/green_endoscopy_dashboard_CenterResource.yaml +144 -0
  57. endoreg_db/data/center_shift/ukw.yaml +9 -0
  58. endoreg_db/data/center_waste/green_endoscopy_dashboard_CenterWaste.yaml +48 -0
  59. endoreg_db/data/contraindication/bleeding.yaml +11 -0
  60. endoreg_db/data/db_summary.csv +58 -0
  61. endoreg_db/data/db_summary.xlsx +0 -0
  62. endoreg_db/data/disease/cardiovascular.yaml +37 -0
  63. endoreg_db/data/disease/hepatology.yaml +5 -0
  64. endoreg_db/data/disease/misc.yaml +5 -0
  65. endoreg_db/data/disease/renal.yaml +5 -0
  66. endoreg_db/data/disease_classification/chronic_kidney_disease.yaml +6 -0
  67. endoreg_db/data/disease_classification/coronary_vessel_disease.yaml +6 -0
  68. endoreg_db/data/disease_classification_choice/chronic_kidney_disease.yaml +41 -0
  69. endoreg_db/data/disease_classification_choice/coronary_vessel_disease.yaml +20 -0
  70. endoreg_db/data/distribution/date/patient.yaml +7 -0
  71. endoreg_db/data/distribution/multiple_categorical/.init +0 -0
  72. endoreg_db/data/distribution/numeric/data.yaml +14 -0
  73. endoreg_db/data/distribution/single_categorical/patient.yaml +7 -0
  74. endoreg_db/data/emission_factor/green_endoscopy_dashboard_EmissionFactor.yaml +132 -0
  75. endoreg_db/data/endoscope/data.yaml +93 -0
  76. endoreg_db/data/endoscope_type/data.yaml +11 -0
  77. endoreg_db/data/endoscopy_processor/data.yaml +50 -0
  78. endoreg_db/data/event/cardiology.yaml +15 -0
  79. endoreg_db/data/event/neurology.yaml +14 -0
  80. endoreg_db/data/event/surgery.yaml +13 -0
  81. endoreg_db/data/event/thrombembolism.yaml +20 -0
  82. endoreg_db/data/event_classification/data.yaml +4 -0
  83. endoreg_db/data/event_classification_choice/data.yaml +9 -0
  84. endoreg_db/data/examination/examinations/data.yaml +172 -0
  85. endoreg_db/data/examination/time/data.yaml +48 -0
  86. endoreg_db/data/examination/time-type/data.yaml +5 -0
  87. endoreg_db/data/examination/type/data.yaml +17 -0
  88. endoreg_db/data/examination_indication/endoscopy.yaml +359 -0
  89. endoreg_db/data/examination_indication_classification/endoscopy.yaml +90 -0
  90. endoreg_db/data/examination_indication_classification_choice/endoscopy.yaml +97 -0
  91. endoreg_db/data/examination_requirement_set/colonoscopy.yaml +15 -0
  92. endoreg_db/data/finding/00_generic.yaml +35 -0
  93. endoreg_db/data/finding/00_generic_complication.yaml +9 -0
  94. endoreg_db/data/finding/01_gastroscopy_baseline.yaml +88 -0
  95. endoreg_db/data/finding/01_gastroscopy_observation.yaml +113 -0
  96. endoreg_db/data/finding/02_colonoscopy_baseline.yaml +53 -0
  97. endoreg_db/data/finding/02_colonoscopy_hidden.yaml +119 -0
  98. endoreg_db/data/finding/02_colonoscopy_observation.yaml +152 -0
  99. endoreg_db/data/finding_classification/00_generic.yaml +44 -0
  100. endoreg_db/data/finding_classification/00_generic_histology.yaml +28 -0
  101. endoreg_db/data/finding_classification/00_generic_lesion.yaml +52 -0
  102. endoreg_db/data/finding_classification/02_colonoscopy_baseline.yaml +83 -0
  103. endoreg_db/data/finding_classification/02_colonoscopy_histology.yaml +13 -0
  104. endoreg_db/data/finding_classification/02_colonoscopy_other.yaml +12 -0
  105. endoreg_db/data/finding_classification/02_colonoscopy_polyp.yaml +101 -0
  106. endoreg_db/data/finding_classification_choice/00_generic.yaml +15 -0
  107. endoreg_db/data/finding_classification_choice/00_generic_baseline.yaml +23 -0
  108. endoreg_db/data/finding_classification_choice/00_generic_complication.yaml +15 -0
  109. endoreg_db/data/finding_classification_choice/00_generic_histology.yaml +21 -0
  110. endoreg_db/data/finding_classification_choice/00_generic_lesion.yaml +158 -0
  111. endoreg_db/data/finding_classification_choice/02_colonoscopy_bowel_preparation.yaml +49 -0
  112. endoreg_db/data/finding_classification_choice/02_colonoscopy_generic.yaml +19 -0
  113. endoreg_db/data/finding_classification_choice/02_colonoscopy_histology.yaml +20 -0
  114. endoreg_db/data/finding_classification_choice/02_colonoscopy_location.yaml +248 -0
  115. endoreg_db/data/finding_classification_choice/02_colonoscopy_other.yaml +34 -0
  116. endoreg_db/data/finding_classification_choice/02_colonoscopy_polyp_advanced_imaging.yaml +76 -0
  117. endoreg_db/data/finding_classification_choice/02_colonoscopy_polyp_morphology.yaml +75 -0
  118. endoreg_db/data/finding_classification_choice/02_colonoscopy_size.yaml +27 -0
  119. endoreg_db/data/finding_classification_type/00_generic.yaml +53 -0
  120. endoreg_db/data/finding_classification_type/02_colonoscopy.yaml +9 -0
  121. endoreg_db/data/finding_intervention/00_generic_endoscopy.yaml +59 -0
  122. endoreg_db/data/finding_intervention/00_generic_endoscopy_ablation.yaml +44 -0
  123. endoreg_db/data/finding_intervention/00_generic_endoscopy_bleeding.yaml +55 -0
  124. endoreg_db/data/finding_intervention/00_generic_endoscopy_resection.yaml +85 -0
  125. endoreg_db/data/finding_intervention/00_generic_endoscopy_stenosis.yaml +17 -0
  126. endoreg_db/data/finding_intervention/00_generic_endoscopy_stent.yaml +9 -0
  127. endoreg_db/data/finding_intervention/01_gastroscopy.yaml +19 -0
  128. endoreg_db/data/finding_intervention/04_eus.yaml +39 -0
  129. endoreg_db/data/finding_intervention/05_ercp.yaml +3 -0
  130. endoreg_db/data/finding_intervention_type/endoscopy.yaml +15 -0
  131. endoreg_db/data/finding_type/data.yaml +39 -0
  132. endoreg_db/data/gender/data.yaml +42 -0
  133. endoreg_db/data/information_source/annotation.yaml +6 -0
  134. endoreg_db/data/information_source/data.yaml +30 -0
  135. endoreg_db/data/information_source/endoscopy_guidelines.yaml +7 -0
  136. endoreg_db/data/information_source/medication.yaml +6 -0
  137. endoreg_db/data/information_source/prediction.yaml +7 -0
  138. endoreg_db/data/information_source_type/data.yaml +8 -0
  139. endoreg_db/data/lab_value/cardiac_enzymes.yaml +37 -0
  140. endoreg_db/data/lab_value/coagulation.yaml +54 -0
  141. endoreg_db/data/lab_value/electrolytes.yaml +228 -0
  142. endoreg_db/data/lab_value/gastrointestinal_function.yaml +133 -0
  143. endoreg_db/data/lab_value/hematology.yaml +184 -0
  144. endoreg_db/data/lab_value/hormones.yaml +59 -0
  145. endoreg_db/data/lab_value/lipids.yaml +53 -0
  146. endoreg_db/data/lab_value/misc.yaml +76 -0
  147. endoreg_db/data/lab_value/renal_function.yaml +12 -0
  148. endoreg_db/data/log_type/data.yaml +57 -0
  149. endoreg_db/data/lx_client_tag/base.yaml +54 -0
  150. endoreg_db/data/lx_client_type/base.yaml +30 -0
  151. endoreg_db/data/lx_permission/base.yaml +24 -0
  152. endoreg_db/data/lx_permission/endoreg.yaml +52 -0
  153. endoreg_db/data/material/material.yaml +91 -0
  154. endoreg_db/data/medication/anticoagulation.yaml +65 -0
  155. endoreg_db/data/medication/tah.yaml +70 -0
  156. endoreg_db/data/medication_indication/anticoagulation.yaml +115 -0
  157. endoreg_db/data/medication_indication_type/data.yaml +11 -0
  158. endoreg_db/data/medication_indication_type/thrombembolism.yaml +41 -0
  159. endoreg_db/data/medication_intake_time/base.yaml +31 -0
  160. endoreg_db/data/medication_schedule/apixaban.yaml +95 -0
  161. endoreg_db/data/medication_schedule/ass.yaml +12 -0
  162. endoreg_db/data/medication_schedule/enoxaparin.yaml +26 -0
  163. endoreg_db/data/names_first/first_names.yaml +54 -0
  164. endoreg_db/data/names_last/last_names.yaml +51 -0
  165. endoreg_db/data/network_device/data.yaml +59 -0
  166. endoreg_db/data/network_device_type/data.yaml +12 -0
  167. endoreg_db/data/organ/data.yaml +29 -0
  168. endoreg_db/data/patient_lab_sample_type/generic.yaml +6 -0
  169. endoreg_db/data/pdf_type/data.yaml +46 -0
  170. endoreg_db/data/product/green_endoscopy_dashboard_Product.yaml +66 -0
  171. endoreg_db/data/product_group/green_endoscopy_dashboard_ProductGroup.yaml +33 -0
  172. endoreg_db/data/product_material/green_endoscopy_dashboard_ProductMaterial.yaml +308 -0
  173. endoreg_db/data/product_weight/green_endoscopy_dashboard_ProductWeight.yaml +88 -0
  174. endoreg_db/data/profession/data.yaml +70 -0
  175. endoreg_db/data/qualification/endoscopy.yaml +36 -0
  176. endoreg_db/data/qualification/m2.yaml +39 -0
  177. endoreg_db/data/qualification/outpatient_clinic.yaml +35 -0
  178. endoreg_db/data/qualification/sonography.yaml +36 -0
  179. endoreg_db/data/qualification_type/base.yaml +29 -0
  180. endoreg_db/data/reference_product/green_endoscopy_dashboard_ReferenceProduct.yaml +55 -0
  181. endoreg_db/data/report_reader_flag/rkh-histology-generic.yaml +10 -0
  182. endoreg_db/data/report_reader_flag/ukw-examination-generic.yaml +30 -0
  183. endoreg_db/data/report_reader_flag/ukw-histology-generic.yaml +24 -0
  184. endoreg_db/data/requirement/01_patient_data.yaml +93 -0
  185. endoreg_db/data/requirement/old/colon_polyp_intervention.yaml +49 -0
  186. endoreg_db/data/requirement/old/colonoscopy_baseline_austria.yaml +45 -0
  187. endoreg_db/data/requirement/old/coloreg_colon_polyp.yaml +49 -0
  188. endoreg_db/data/requirement/old/disease_cardiovascular.yaml +79 -0
  189. endoreg_db/data/requirement/old/disease_classification_choice_cardiovascular.yaml +41 -0
  190. endoreg_db/data/requirement/old/disease_hepatology.yaml +12 -0
  191. endoreg_db/data/requirement/old/disease_misc.yaml +12 -0
  192. endoreg_db/data/requirement/old/disease_renal.yaml +96 -0
  193. endoreg_db/data/requirement/old/endoscopy_bleeding_risk.yaml +59 -0
  194. endoreg_db/data/requirement/old/event_cardiology.yaml +251 -0
  195. endoreg_db/data/requirement/old/event_requirements.yaml +145 -0
  196. endoreg_db/data/requirement/old/finding_colon_polyp.yaml +50 -0
  197. endoreg_db/data/requirement/old/gender.yaml +0 -0
  198. endoreg_db/data/requirement/old/lab_value.yaml +441 -0
  199. endoreg_db/data/requirement/old/medication.yaml +93 -0
  200. endoreg_db/data/requirement_operator/_old/age.yaml +13 -0
  201. endoreg_db/data/requirement_operator/_old/lab_operators.yaml +129 -0
  202. endoreg_db/data/requirement_operator/_old/model_operators.yaml +96 -0
  203. endoreg_db/data/requirement_operator/new_operators.yaml +36 -0
  204. endoreg_db/data/requirement_set/01_endoscopy_generic.yaml +65 -0
  205. endoreg_db/data/requirement_set/01_laboratory.yaml +13 -0
  206. endoreg_db/data/requirement_set/02_endoscopy_bleeding_risk.yaml +46 -0
  207. endoreg_db/data/requirement_set/90_coloreg.yaml +190 -0
  208. endoreg_db/data/requirement_set/_old_ +109 -0
  209. endoreg_db/data/requirement_set/colonoscopy_austria_screening.yaml +57 -0
  210. endoreg_db/data/requirement_set_type/data.yaml +41 -0
  211. endoreg_db/data/requirement_type/requirement_types.yaml +165 -0
  212. endoreg_db/data/resource/green_endoscopy_dashboard_Resource.yaml +15 -0
  213. endoreg_db/data/risk/bleeding.yaml +26 -0
  214. endoreg_db/data/risk/thrombosis.yaml +37 -0
  215. endoreg_db/data/risk_type/data.yaml +27 -0
  216. endoreg_db/data/setup_config.yaml +38 -0
  217. endoreg_db/data/shift/endoscopy.yaml +21 -0
  218. endoreg_db/data/shift/m2.yaml +0 -0
  219. endoreg_db/data/shift_type/base.yaml +35 -0
  220. endoreg_db/data/tag/requirement_set_tags.yaml +32 -0
  221. endoreg_db/data/tmp/chronic_kidney_disease.yaml +0 -0
  222. endoreg_db/data/tmp/congestive_heart_failure.yaml +0 -0
  223. endoreg_db/data/transport_route/green_endoscopy_dashboard_TransportRoute.yaml +12 -0
  224. endoreg_db/data/unit/concentration.yaml +115 -0
  225. endoreg_db/data/unit/data.yaml +17 -0
  226. endoreg_db/data/unit/length.yaml +31 -0
  227. endoreg_db/data/unit/misc.yaml +20 -0
  228. endoreg_db/data/unit/rate.yaml +6 -0
  229. endoreg_db/data/unit/time.yaml +48 -0
  230. endoreg_db/data/unit/volume.yaml +35 -0
  231. endoreg_db/data/unit/weight.yaml +38 -0
  232. endoreg_db/data/waste/data.yaml +12 -0
  233. endoreg_db/exceptions.py +24 -0
  234. endoreg_db/export/frames/export.py +6 -0
  235. endoreg_db/export/frames/export_frames_with_labels.py +616 -0
  236. endoreg_db/factories/__init__.py +0 -0
  237. endoreg_db/forms/__init__.py +4 -0
  238. endoreg_db/forms/examination_form.py +12 -0
  239. endoreg_db/forms/patient_finding_intervention_form.py +40 -0
  240. endoreg_db/forms/patient_form.py +23 -0
  241. endoreg_db/forms/questionnaires/__init__.py +1 -0
  242. endoreg_db/forms/questionnaires/tto_questionnaire.py +23 -0
  243. endoreg_db/forms/settings/__init__.py +11 -0
  244. endoreg_db/forms/unit.py +7 -0
  245. endoreg_db/helpers/__init__.py +0 -0
  246. endoreg_db/helpers/count_db.py +48 -0
  247. endoreg_db/helpers/data_loader.py +280 -0
  248. endoreg_db/helpers/default_objects.py +414 -0
  249. endoreg_db/helpers/download_segmentation_model.py +32 -0
  250. endoreg_db/helpers/interact.py +1 -0
  251. endoreg_db/helpers/test_video_helper.py +127 -0
  252. endoreg_db/import_files/__init__.py +27 -0
  253. endoreg_db/import_files/context/__init__.py +7 -0
  254. endoreg_db/import_files/context/default_sensitive_meta.py +83 -0
  255. endoreg_db/import_files/context/ensure_center.py +17 -0
  256. endoreg_db/import_files/context/file_lock.py +66 -0
  257. endoreg_db/import_files/context/import_context.py +42 -0
  258. endoreg_db/import_files/context/validate_directories.py +57 -0
  259. endoreg_db/import_files/file_storage/__init__.py +15 -0
  260. endoreg_db/import_files/file_storage/create_report_file.py +99 -0
  261. endoreg_db/import_files/file_storage/create_video_file.py +104 -0
  262. endoreg_db/import_files/file_storage/sensitive_meta_storage.py +42 -0
  263. endoreg_db/import_files/file_storage/state_management.py +463 -0
  264. endoreg_db/import_files/file_storage/storage.py +42 -0
  265. endoreg_db/import_files/import_service.md +26 -0
  266. endoreg_db/import_files/processing/__init__.py +11 -0
  267. endoreg_db/import_files/processing/report_processing/report_anonymization.py +99 -0
  268. endoreg_db/import_files/processing/sensitive_meta_adapter.py +51 -0
  269. endoreg_db/import_files/processing/video_processing/video_anonymization.py +107 -0
  270. endoreg_db/import_files/pseudonymization/__init__.py +0 -0
  271. endoreg_db/import_files/pseudonymization/fake.py +52 -0
  272. endoreg_db/import_files/pseudonymization/k_anonymity.py +181 -0
  273. endoreg_db/import_files/pseudonymization/k_pseudonymity.py +139 -0
  274. endoreg_db/import_files/pseudonymization/pseudonymize.py +0 -0
  275. endoreg_db/import_files/report_import_service.py +147 -0
  276. endoreg_db/import_files/video_import_service.py +154 -0
  277. endoreg_db/logger_conf.py +156 -0
  278. endoreg_db/management/__init__.py +1 -0
  279. endoreg_db/management/commands/__init__.py +1 -0
  280. endoreg_db/management/commands/anonymize_video.py +0 -0
  281. endoreg_db/management/commands/check_auth.py +132 -0
  282. endoreg_db/management/commands/create_model_meta_from_huggingface.py +177 -0
  283. endoreg_db/management/commands/create_multilabel_model_meta.py +419 -0
  284. endoreg_db/management/commands/export_frame_annot.py +196 -0
  285. endoreg_db/management/commands/fix_missing_patient_data.py +206 -0
  286. endoreg_db/management/commands/fix_video_paths.py +186 -0
  287. endoreg_db/management/commands/import_report.py +361 -0
  288. endoreg_db/management/commands/list_routes.py +20 -0
  289. endoreg_db/management/commands/load_ai_model_data.py +83 -0
  290. endoreg_db/management/commands/load_ai_model_label_data.py +60 -0
  291. endoreg_db/management/commands/load_base_db_data.py +63 -0
  292. endoreg_db/management/commands/load_center_data.py +68 -0
  293. endoreg_db/management/commands/load_contraindication_data.py +39 -0
  294. endoreg_db/management/commands/load_disease_classification_choices_data.py +38 -0
  295. endoreg_db/management/commands/load_disease_classification_data.py +38 -0
  296. endoreg_db/management/commands/load_disease_data.py +59 -0
  297. endoreg_db/management/commands/load_distribution_data.py +63 -0
  298. endoreg_db/management/commands/load_endoscope_data.py +58 -0
  299. endoreg_db/management/commands/load_event_data.py +39 -0
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  604. endoreg_db/serializers/video/__init__.py +7 -0
  605. endoreg_db/serializers/video/video_file.py +283 -0
  606. endoreg_db/serializers/video/video_file_brief.py +14 -0
  607. endoreg_db/serializers/video/video_file_detail.py +96 -0
  608. endoreg_db/serializers/video/video_file_list.py +100 -0
  609. endoreg_db/serializers/video/video_processing_history.py +172 -0
  610. endoreg_db/serializers/video_examination.py +198 -0
  611. endoreg_db/services/__init__.py +5 -0
  612. endoreg_db/services/anonymization.py +274 -0
  613. endoreg_db/services/examination_evaluation.py +172 -0
  614. endoreg_db/services/finding_description_service.py +0 -0
  615. endoreg_db/services/lookup_service.py +424 -0
  616. endoreg_db/services/lookup_store.py +266 -0
  617. endoreg_db/services/model_meta_from_hf.py +76 -0
  618. endoreg_db/services/pdf_import.py +0 -0
  619. endoreg_db/services/polling_coordinator.py +319 -0
  620. endoreg_db/services/pseudonym_service.py +94 -0
  621. endoreg_db/services/report_import.py +13 -0
  622. endoreg_db/services/segment_sync.py +171 -0
  623. endoreg_db/services/video_import.py +9 -0
  624. endoreg_db/templates/admin/patient_finding_intervention.html +253 -0
  625. endoreg_db/templates/admin/start_examination.html +12 -0
  626. endoreg_db/templates/timeline.html +176 -0
  627. endoreg_db/urls/__init__.py +56 -0
  628. endoreg_db/urls/ai.py +14 -0
  629. endoreg_db/urls/anonymization.py +78 -0
  630. endoreg_db/urls/auth.py +16 -0
  631. endoreg_db/urls/classification.py +34 -0
  632. endoreg_db/urls/examination.py +63 -0
  633. endoreg_db/urls/media.py +251 -0
  634. endoreg_db/urls/patient.py +23 -0
  635. endoreg_db/urls/requirements.py +15 -0
  636. endoreg_db/urls/root_urls.py +28 -0
  637. endoreg_db/urls/stats.py +54 -0
  638. endoreg_db/urls/upload.py +12 -0
  639. endoreg_db/urls.py +9 -0
  640. endoreg_db/utils/__init__.py +97 -0
  641. endoreg_db/utils/ai/__init__.py +9 -0
  642. endoreg_db/utils/ai/data_loader_for_model_input.py +262 -0
  643. endoreg_db/utils/ai/data_loader_for_model_training.py +262 -0
  644. endoreg_db/utils/ai/get.py +6 -0
  645. endoreg_db/utils/ai/inference_dataset.py +51 -0
  646. endoreg_db/utils/ai/model_training/config.py +117 -0
  647. endoreg_db/utils/ai/model_training/dataset.py +74 -0
  648. endoreg_db/utils/ai/model_training/losses.py +68 -0
  649. endoreg_db/utils/ai/model_training/metrics.py +78 -0
  650. endoreg_db/utils/ai/model_training/model_backbones.py +155 -0
  651. endoreg_db/utils/ai/model_training/model_gastronet_resnet.py +118 -0
  652. endoreg_db/utils/ai/model_training/trainer_gastronet_multilabel.py +771 -0
  653. endoreg_db/utils/ai/multilabel_classification_net.py +270 -0
  654. endoreg_db/utils/ai/postprocess.py +63 -0
  655. endoreg_db/utils/ai/predict.py +293 -0
  656. endoreg_db/utils/ai/preprocess.py +76 -0
  657. endoreg_db/utils/calc_duration_seconds.py +24 -0
  658. endoreg_db/utils/case_generator/__init__.py +3 -0
  659. endoreg_db/utils/case_generator/lab_sample_factory.py +32 -0
  660. endoreg_db/utils/check_video_files.py +175 -0
  661. endoreg_db/utils/cropping.py +30 -0
  662. endoreg_db/utils/dataloader.py +285 -0
  663. endoreg_db/utils/dates.py +59 -0
  664. endoreg_db/utils/defaults/set_default_center.py +33 -0
  665. endoreg_db/utils/env.py +37 -0
  666. endoreg_db/utils/extract_specific_frames.py +87 -0
  667. endoreg_db/utils/file_operations.py +70 -0
  668. endoreg_db/utils/fix_video_path_direct.py +157 -0
  669. endoreg_db/utils/frame_anonymization_utils.py +463 -0
  670. endoreg_db/utils/hashs.py +138 -0
  671. endoreg_db/utils/links/__init__.py +0 -0
  672. endoreg_db/utils/links/requirement_link.py +237 -0
  673. endoreg_db/utils/mime_types.py +0 -0
  674. endoreg_db/utils/names.py +82 -0
  675. endoreg_db/utils/ocr.py +195 -0
  676. endoreg_db/utils/operation_log.py +87 -0
  677. endoreg_db/utils/parse_and_generate_yaml.py +45 -0
  678. endoreg_db/utils/paths.py +159 -0
  679. endoreg_db/utils/permissions.py +160 -0
  680. endoreg_db/utils/pipelines/Readme.md +235 -0
  681. endoreg_db/utils/pipelines/__init__.py +0 -0
  682. endoreg_db/utils/pipelines/process_video_dir.py +144 -0
  683. endoreg_db/utils/product/__init__.py +0 -0
  684. endoreg_db/utils/product/sum_emissions.py +22 -0
  685. endoreg_db/utils/product/sum_weights.py +20 -0
  686. endoreg_db/utils/pydantic_models/__init__.py +5 -0
  687. endoreg_db/utils/pydantic_models/db_config.py +57 -0
  688. endoreg_db/utils/requirement_helpers.py +0 -0
  689. endoreg_db/utils/requirement_operator_logic/__init__.py +0 -0
  690. endoreg_db/utils/requirement_operator_logic/_old/lab_value_operators.py +678 -0
  691. endoreg_db/utils/requirement_operator_logic/_old/model_evaluators.py +842 -0
  692. endoreg_db/utils/requirement_operator_logic/new_operator_logic.py +114 -0
  693. endoreg_db/utils/setup_config.py +196 -0
  694. endoreg_db/utils/storage.py +117 -0
  695. endoreg_db/utils/translation.py +31 -0
  696. endoreg_db/utils/uuid.py +5 -0
  697. endoreg_db/utils/validate_endo_roi.py +33 -0
  698. endoreg_db/utils/validate_subcategory_dict.py +93 -0
  699. endoreg_db/utils/validate_video_detailed.py +415 -0
  700. endoreg_db/utils/video/__init__.py +30 -0
  701. endoreg_db/utils/video/extract_frames.py +100 -0
  702. endoreg_db/utils/video/ffmpeg_wrapper.py +996 -0
  703. endoreg_db/utils/video/names.py +47 -0
  704. endoreg_db/utils/video/streaming_processor.py +386 -0
  705. endoreg_db/utils/video/video_splitter.py +105 -0
  706. endoreg_db/versioning.md +79 -0
  707. endoreg_db/views/Frames_NICE_and_PARIS_classifications_views.py +247 -0
  708. endoreg_db/views/__init__.py +157 -0
  709. endoreg_db/views/anonymization/__init__.py +31 -0
  710. endoreg_db/views/anonymization/media_management.py +486 -0
  711. endoreg_db/views/anonymization/overview.py +307 -0
  712. endoreg_db/views/anonymization/validate.py +310 -0
  713. endoreg_db/views/auth/__init__.py +13 -0
  714. endoreg_db/views/auth/keycloak.py +146 -0
  715. endoreg_db/views/examination/__init__.py +30 -0
  716. endoreg_db/views/examination/examination.py +37 -0
  717. endoreg_db/views/examination/examination_manifest_cache.py +26 -0
  718. endoreg_db/views/examination/get_finding_classification_choices.py +62 -0
  719. endoreg_db/views/examination/get_finding_classifications.py +38 -0
  720. endoreg_db/views/examination/get_findings.py +39 -0
  721. endoreg_db/views/examination/get_instruments.py +19 -0
  722. endoreg_db/views/examination/get_interventions.py +14 -0
  723. endoreg_db/views/finding/__init__.py +9 -0
  724. endoreg_db/views/finding/finding.py +116 -0
  725. endoreg_db/views/finding/get_classifications.py +14 -0
  726. endoreg_db/views/finding/get_interventions.py +17 -0
  727. endoreg_db/views/finding_classification/__init__.py +13 -0
  728. endoreg_db/views/finding_classification/base.py +0 -0
  729. endoreg_db/views/finding_classification/finding_classification.py +41 -0
  730. endoreg_db/views/finding_classification/get_classification_choices.py +54 -0
  731. endoreg_db/views/media/__init__.py +32 -0
  732. endoreg_db/views/media/pdf_media.py +411 -0
  733. endoreg_db/views/media/sensitive_metadata.py +372 -0
  734. endoreg_db/views/media/video_media.py +275 -0
  735. endoreg_db/views/meta/__init__.py +7 -0
  736. endoreg_db/views/meta/sensitive_meta_list.py +102 -0
  737. endoreg_db/views/meta/sensitive_meta_verification.py +74 -0
  738. endoreg_db/views/misc/__init__.py +29 -0
  739. endoreg_db/views/misc/center.py +14 -0
  740. endoreg_db/views/misc/csrf.py +8 -0
  741. endoreg_db/views/misc/gender.py +15 -0
  742. endoreg_db/views/misc/stats.py +255 -0
  743. endoreg_db/views/misc/upload_views.py +241 -0
  744. endoreg_db/views/patient/__init__.py +3 -0
  745. endoreg_db/views/patient/patient.py +253 -0
  746. endoreg_db/views/patient_examination/__init__.py +11 -0
  747. endoreg_db/views/patient_examination/patient_examination.py +141 -0
  748. endoreg_db/views/patient_examination/patient_examination_create.py +58 -0
  749. endoreg_db/views/patient_examination/patient_examination_detail.py +63 -0
  750. endoreg_db/views/patient_examination/patient_examination_list.py +72 -0
  751. endoreg_db/views/patient_examination/video.py +228 -0
  752. endoreg_db/views/patient_finding/__init__.py +7 -0
  753. endoreg_db/views/patient_finding/base.py +0 -0
  754. endoreg_db/views/patient_finding/patient_finding.py +71 -0
  755. endoreg_db/views/patient_finding/patient_finding_optimized.py +291 -0
  756. endoreg_db/views/patient_finding_classification/__init__.py +5 -0
  757. endoreg_db/views/patient_finding_classification/pfc_create.py +75 -0
  758. endoreg_db/views/report/__init__.py +7 -0
  759. endoreg_db/views/report/reimport.py +177 -0
  760. endoreg_db/views/report/report_stream.py +191 -0
  761. endoreg_db/views/requirement/__init__.py +11 -0
  762. endoreg_db/views/requirement/evaluate.py +278 -0
  763. endoreg_db/views/requirement/lookup.py +380 -0
  764. endoreg_db/views/requirement/lookup_store.py +183 -0
  765. endoreg_db/views/requirement/requirement_utils.py +87 -0
  766. endoreg_db/views/requirement_lookup/lookup.py +0 -0
  767. endoreg_db/views/requirement_lookup/lookup_store.py +0 -0
  768. endoreg_db/views/stats/__init__.py +13 -0
  769. endoreg_db/views/stats/stats_views.py +266 -0
  770. endoreg_db/views/video/__init__.py +49 -0
  771. endoreg_db/views/video/ai/__init__.py +8 -0
  772. endoreg_db/views/video/ai/label.py +159 -0
  773. endoreg_db/views/video/correction.py +529 -0
  774. endoreg_db/views/video/reimport.py +230 -0
  775. endoreg_db/views/video/segments_crud.py +709 -0
  776. endoreg_db/views/video/video_apply_mask.py +49 -0
  777. endoreg_db/views/video/video_correction.py +22 -0
  778. endoreg_db/views/video/video_download_processed.py +58 -0
  779. endoreg_db/views/video/video_examination_viewset.py +242 -0
  780. endoreg_db/views/video/video_metadata.py +101 -0
  781. endoreg_db/views/video/video_processing_history.py +25 -0
  782. endoreg_db/views/video/video_remove_frames.py +49 -0
  783. endoreg_db/views/video/video_stream.py +334 -0
  784. endoreg_db-0.8.9.32.dist-info/METADATA +404 -0
  785. endoreg_db-0.8.9.32.dist-info/RECORD +787 -0
  786. endoreg_db-0.8.9.32.dist-info/WHEEL +4 -0
  787. endoreg_db-0.8.9.32.dist-info/licenses/LICENSE +674 -0
@@ -0,0 +1,486 @@
1
+ # endoreg_db/views/media_management.py
2
+
3
+ import logging
4
+ from datetime import timedelta
5
+ from typing import Any, Dict
6
+
7
+ from django.db import transaction
8
+ from django.utils import timezone
9
+ from rest_framework import status
10
+ from rest_framework.decorators import api_view, permission_classes
11
+ from rest_framework.response import Response
12
+ from rest_framework.views import APIView
13
+
14
+ from endoreg_db.models import RawPdfFile, VideoFile, VideoState
15
+ from endoreg_db.utils.permissions import DEBUG_PERMISSIONS
16
+
17
+ logger = logging.getLogger(__name__)
18
+
19
+ # ---------------------------------------------------------------------------
20
+ # Media Cleanup and Management API
21
+ # ---------------------------------------------------------------------------
22
+
23
+
24
+ class MediaManagementView(APIView):
25
+ """
26
+ Comprehensive Media Management API for cleanup and maintenance operations
27
+ """
28
+
29
+ permission_classes = DEBUG_PERMISSIONS
30
+
31
+ def get(self, request):
32
+ """
33
+ GET /api/media-management/status/
34
+ Get overview of media status and cleanup opportunities
35
+ """
36
+ try:
37
+ status_overview = self._get_status_overview()
38
+ return Response(status_overview)
39
+ except Exception as e:
40
+ logger.error(f"Error getting media status overview: {e}")
41
+ return Response(
42
+ {"error": "Failed to get status overview"},
43
+ status=status.HTTP_500_INTERNAL_SERVER_ERROR,
44
+ )
45
+
46
+ def delete(self, request):
47
+ """
48
+ DELETE /api/media-management/cleanup/
49
+ Cleanup unfinished, failed, or stale media processing entries
50
+ """
51
+ cleanup_type = request.query_params.get("type", "unfinished")
52
+ force = request.query_params.get("force", "false").lower() == "true"
53
+ media_type = request.query_params.get("file_type", "all")
54
+ file_id = request.query_params.get("file_id", None)
55
+
56
+ try:
57
+ result = self._perform_cleanup(cleanup_type, force, media_type, file_id)
58
+
59
+ return Response(result)
60
+ except Exception as e:
61
+ logger.error(f"Error during media cleanup: {e}")
62
+ return Response(
63
+ {"error": "Cleanup operation failed"},
64
+ status=status.HTTP_500_INTERNAL_SERVER_ERROR,
65
+ )
66
+
67
+ def _get_status_overview(self) -> Dict[str, Any]:
68
+ """Get comprehensive status overview"""
69
+ video_stats = self._get_video_stats()
70
+ pdf_stats = self._get_pdf_stats()
71
+
72
+ # Stale processing detection (older than 2 hours)
73
+ stale_threshold = timezone.now() - timedelta(hours=2)
74
+ # Use VideoState boolean fields instead of non-existent name field
75
+ stale_videos = VideoFile.objects.filter(
76
+ uploaded_at__lt=stale_threshold,
77
+ state__frames_extracted=True,
78
+ state__sensitive_meta_processed=False,
79
+ ).count()
80
+
81
+ return {
82
+ "videos": video_stats,
83
+ "pdfs": pdf_stats,
84
+ "cleanup_opportunities": {
85
+ "stale_processing": stale_videos,
86
+ "failed_videos": video_stats["failed"],
87
+ "unfinished_total": video_stats["unfinished"] + pdf_stats["unfinished"],
88
+ },
89
+ "total_files": video_stats["total"] + pdf_stats["total"],
90
+ "timestamp": timezone.now().isoformat(),
91
+ }
92
+
93
+ def _get_video_stats(self) -> Dict[str, int]:
94
+ """Get video file statistics using VideoState boolean fields"""
95
+ videos = VideoFile.objects.select_related("state").all()
96
+
97
+ stats = {
98
+ "total": videos.count(),
99
+ "not_started": 0,
100
+ "processing": 0,
101
+ "done": 0,
102
+ "failed": 0,
103
+ "validated": 0,
104
+ "unfinished": 0,
105
+ }
106
+
107
+ for video in videos:
108
+ if not video.state:
109
+ stats["not_started"] += 1
110
+ stats["unfinished"] += 1
111
+ continue
112
+
113
+ # Use the anonymization_status property
114
+ video_status = video.state.anonymization_status
115
+
116
+ if video_status.value == "not_started":
117
+ stats["not_started"] += 1
118
+ stats["unfinished"] += 1
119
+ elif video_status.value in [
120
+ "extracting_frames",
121
+ "processing_anonymization",
122
+ ]:
123
+ stats["processing"] += 1
124
+ stats["unfinished"] += 1
125
+ elif video_status.value == "done_processing_anonymization":
126
+ stats["done"] += 1
127
+ elif video_status.value == "failed":
128
+ stats["failed"] += 1
129
+ stats["unfinished"] += 1
130
+ elif video_status.value == "validated":
131
+ stats["validated"] += 1
132
+ else:
133
+ stats["unfinished"] += 1
134
+ return stats
135
+
136
+ def _get_pdf_stats(self) -> Dict[str, int]:
137
+ """Get report file statistics"""
138
+ pdfs = RawPdfFile.objects.all()
139
+
140
+ stats = {
141
+ "total": pdfs.count(),
142
+ "not_started": 0,
143
+ "processing": 0,
144
+ "done": 0,
145
+ "failed": 0,
146
+ "validated": 0,
147
+ "unfinished": 0,
148
+ }
149
+
150
+ for pdf in pdfs:
151
+ # report status logic based on anonymized_text presence and validation
152
+ has_anonymized = bool(pdf.anonymized_text and pdf.anonymized_text.strip())
153
+ is_validated = (
154
+ getattr(pdf.sensitive_meta, "is_verified", False)
155
+ if pdf.sensitive_meta
156
+ else False
157
+ )
158
+
159
+ if not has_anonymized:
160
+ stats["not_started"] += 1
161
+ stats["unfinished"] += 1
162
+ elif has_anonymized and is_validated:
163
+ stats["validated"] += 1
164
+ elif has_anonymized and not is_validated:
165
+ stats["done"] += 1
166
+ else:
167
+ stats["unfinished"] += 1
168
+
169
+ return stats
170
+
171
+ def _perform_cleanup(
172
+ self, cleanup_type: str, force: bool, media_type: str, file_id: int
173
+ ) -> Dict[str, Any]:
174
+ """Perform the actual cleanup operations"""
175
+
176
+ result = {
177
+ "cleanup_type": cleanup_type,
178
+ "force": force,
179
+ "removed_items": [],
180
+ "summary": {},
181
+ }
182
+
183
+ if media_type not in ["video", "pdf", "all"]:
184
+ raise ValueError(f"Unknown media type: {media_type}")
185
+
186
+ if file_id is not None:
187
+ try:
188
+ file_id = int(file_id)
189
+ except ValueError:
190
+ raise ValueError(f"Invalid file ID: {file_id}")
191
+
192
+ video_file_obj = None
193
+ pdf_file_obj = None
194
+
195
+ if media_type == "video":
196
+ video_file_obj = VideoFile.get_video_by_pk(pk=file_id) if file_id else None
197
+
198
+ elif media_type == "pdf":
199
+ pdf_file_obj = RawPdfFile.get_report_by_pk(pk=file_id) if file_id else None
200
+
201
+ with transaction.atomic():
202
+ if video_file_obj:
203
+ video_file_obj.delete()
204
+ if pdf_file_obj:
205
+ pdf_file_obj.delete()
206
+
207
+ if cleanup_type == "unfinished":
208
+ result.update(self._cleanup_unfinished_media(force))
209
+ elif cleanup_type == "failed":
210
+ result.update(self._cleanup_failed_media(force))
211
+ elif cleanup_type == "stale":
212
+ result.update(self._cleanup_stale_processing(force))
213
+ elif cleanup_type == "all":
214
+ unfinished = self._cleanup_unfinished_media(force)
215
+ failed = self._cleanup_failed_media(force)
216
+ stale = self._cleanup_stale_processing(force)
217
+
218
+ result["removed_items"] = (
219
+ unfinished.get("removed_items", [])
220
+ + failed.get("removed_items", [])
221
+ + stale.get("removed_items", [])
222
+ )
223
+ result["summary"] = {
224
+ "unfinished": unfinished.get("summary", {}),
225
+ "failed": failed.get("summary", {}),
226
+ "stale": stale.get("summary", {}),
227
+ }
228
+ else:
229
+ raise ValueError(f"Unknown cleanup type: {cleanup_type}")
230
+
231
+ return result
232
+
233
+ def _cleanup_unfinished_media(self, force: bool) -> Dict[str, Any]:
234
+ """Remove unfinished media processing entries"""
235
+ removed_videos = []
236
+ removed_pdfs = []
237
+
238
+ # Find unfinished videos using VideoState boolean fields
239
+ unfinished_videos = VideoFile.objects.select_related("state").all()
240
+
241
+ for video in unfinished_videos:
242
+ if not video.state:
243
+ if force: # Only remove videos without state if force=True
244
+ removed_videos.append(
245
+ {
246
+ "id": video.id,
247
+ "type": "video",
248
+ "filename": video.original_file_name,
249
+ "status": "no_state",
250
+ "uploaded_at": video.uploaded_at.isoformat(),
251
+ }
252
+ )
253
+ video.delete()
254
+ continue
255
+
256
+ video_status = video.state.anonymization_status
257
+ is_unfinished = video_status.value in [
258
+ "not_started",
259
+ "extracting_frames",
260
+ "processing_anonymization",
261
+ "failed",
262
+ ]
263
+
264
+ # Remove unfinished videos
265
+ if is_unfinished and (force or video_status.value != "not_started"):
266
+ removed_videos.append(
267
+ {
268
+ "id": video.id,
269
+ "type": "video",
270
+ "filename": video.original_file_name,
271
+ "status": video_status.value,
272
+ "uploaded_at": video.uploaded_at.isoformat(),
273
+ }
274
+ )
275
+ if force:
276
+ video.delete()
277
+
278
+ # Return the results
279
+ return {
280
+ "removed_items": removed_videos + removed_pdfs,
281
+ "summary": {
282
+ "videos_removed": len(removed_videos),
283
+ "pdfs_removed": len(removed_pdfs),
284
+ "total_removed": len(removed_videos) + len(removed_pdfs),
285
+ "dry_run": not force,
286
+ },
287
+ }
288
+
289
+ def _cleanup_failed_media(self, force: bool) -> Dict[str, Any]:
290
+ """Remove failed media processing entries"""
291
+ removed_items = []
292
+
293
+ # Find failed videos using VideoState boolean fields
294
+ failed_videos = VideoFile.objects.select_related("state").all()
295
+
296
+ for video in failed_videos:
297
+ if video.state and video.state.anonymization_status.value == "failed":
298
+ removed_items.append(
299
+ {
300
+ "id": video.id,
301
+ "type": "video",
302
+ "filename": video.original_file_name,
303
+ "status": "failed",
304
+ "uploaded_at": video.uploaded_at.isoformat(),
305
+ }
306
+ )
307
+ if force:
308
+ video.delete()
309
+
310
+ if force:
311
+ # Count actual deletions
312
+ videos_deleted = len([v for v in removed_items if v["type"] == "video"])
313
+ return {
314
+ "removed_items": removed_items,
315
+ "summary": {
316
+ "videos_removed": videos_deleted,
317
+ "total_removed": videos_deleted,
318
+ "dry_run": False,
319
+ },
320
+ }
321
+ else:
322
+ return {
323
+ "removed_items": removed_items,
324
+ "summary": {
325
+ "videos_removed": len(removed_items),
326
+ "total_removed": len(removed_items),
327
+ "dry_run": True,
328
+ },
329
+ }
330
+
331
+ def _cleanup_stale_processing(self, force: bool) -> Dict[str, Any]:
332
+ """Remove stale processing entries (older than 2 hours)"""
333
+ stale_threshold = timezone.now() - timedelta(hours=2)
334
+ removed_items = []
335
+
336
+ # Find stale videos using VideoState boolean fields
337
+ stale_videos = VideoFile.objects.filter(
338
+ uploaded_at__lt=stale_threshold,
339
+ state__frames_extracted=True,
340
+ state__sensitive_meta_processed=False,
341
+ ).select_related("state")
342
+
343
+ for video in stale_videos:
344
+ video_status = (
345
+ video.state.anonymization_status if video.state else "no_state"
346
+ )
347
+ removed_items.append(
348
+ {
349
+ "id": video.id,
350
+ "type": "video",
351
+ "filename": video.original_file_name,
352
+ "status": f"stale_{video_status.value if hasattr(video_status, 'value') else video_status}",
353
+ "uploaded_at": video.uploaded_at.isoformat(),
354
+ "stale_duration_hours": (
355
+ timezone.now() - video.uploaded_at
356
+ ).total_seconds()
357
+ / 3600,
358
+ }
359
+ )
360
+
361
+ if force:
362
+ videos_deleted = stale_videos.delete()[0]
363
+ return {
364
+ "removed_items": removed_items,
365
+ "summary": {
366
+ "stale_videos_removed": videos_deleted,
367
+ "total_removed": videos_deleted,
368
+ "dry_run": False,
369
+ },
370
+ }
371
+ else:
372
+ return {
373
+ "removed_items": removed_items,
374
+ "summary": {
375
+ "stale_videos_removed": len(removed_items),
376
+ "total_removed": len(removed_items),
377
+ "dry_run": True,
378
+ },
379
+ }
380
+
381
+
382
+ @api_view(["DELETE"])
383
+ @permission_classes(DEBUG_PERMISSIONS)
384
+ def force_remove_media(request, file_id: int):
385
+ """
386
+ DELETE /api/media-management/force-remove/{file_id}/
387
+ Force remove a specific media item regardless of status
388
+ """
389
+ try:
390
+ # Try to find and delete from VideoFile first
391
+ try:
392
+ video = VideoFile.objects.get(id=file_id)
393
+ filename = video.original_file_name
394
+ video.delete()
395
+
396
+ return Response(
397
+ {
398
+ "detail": f"Video file '{filename}' (ID: {file_id}) removed successfully",
399
+ "file_type": "video",
400
+ "file_id": file_id,
401
+ }
402
+ )
403
+ except VideoFile.DoesNotExist:
404
+ pass
405
+
406
+ # Try to find and delete from RawPdfFile
407
+ try:
408
+ pdf = RawPdfFile.objects.get(id=file_id)
409
+ filename = getattr(pdf.file, "name", "Unknown")
410
+ pdf.delete()
411
+
412
+ return Response(
413
+ {
414
+ "detail": f"report file '{filename}' (ID: {file_id}) removed successfully",
415
+ "file_type": "pdf",
416
+ "file_id": file_id,
417
+ }
418
+ )
419
+ except RawPdfFile.DoesNotExist:
420
+ pass
421
+
422
+ return Response({"detail": "File not found"}, status=status.HTTP_404_NOT_FOUND)
423
+
424
+ except Exception as e:
425
+ logger.error(f"Error force removing media {file_id}: {e}")
426
+ return Response(
427
+ {"error": "Force removal failed"},
428
+ status=status.HTTP_500_INTERNAL_SERVER_ERROR,
429
+ )
430
+
431
+
432
+ @api_view(["POST"])
433
+ @permission_classes(DEBUG_PERMISSIONS)
434
+ def reset_processing_status(request, file_id: int):
435
+ """
436
+ POST /api/media-management/reset-status/{file_id}/
437
+ Reset processing status for a stuck/failed media item
438
+ """
439
+ try:
440
+ # Try VideoFile first
441
+ try:
442
+ video = VideoFile.objects.get(id=file_id)
443
+
444
+ # Reset to 'not_started' state
445
+ not_started_state, created = VideoState.objects.get_or_create(
446
+ name="not_started"
447
+ )
448
+ video.state = not_started_state
449
+ video.save()
450
+
451
+ return Response(
452
+ {
453
+ "detail": "Video file status reset to 'not_started'",
454
+ "file_type": "video",
455
+ "file_id": file_id,
456
+ "new_status": "not_started",
457
+ }
458
+ )
459
+ except VideoFile.DoesNotExist:
460
+ pass
461
+
462
+ # report files don't have state, but we can clear anonymized_text
463
+ try:
464
+ pdf = RawPdfFile.objects.get(id=file_id)
465
+ pdf.anonymized_text = ""
466
+ pdf.save()
467
+
468
+ return Response(
469
+ {
470
+ "detail": "report file processing reset",
471
+ "file_type": "pdf",
472
+ "file_id": file_id,
473
+ "new_status": "not_started",
474
+ }
475
+ )
476
+ except RawPdfFile.DoesNotExist:
477
+ pass
478
+
479
+ return Response({"detail": "File not found"}, status=status.HTTP_404_NOT_FOUND)
480
+
481
+ except Exception as e:
482
+ logger.error(f"Error resetting status for media {file_id}: {e}")
483
+ return Response(
484
+ {"error": "Status reset failed"},
485
+ status=status.HTTP_500_INTERNAL_SERVER_ERROR,
486
+ )