dsh-eval-guard 0.2.3 → 0.3.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +91 -13
- package/assets/commit0/instance.json +30 -0
- package/assets/commit0/workspace.zip +0 -0
- package/assets/featurebench/hidden/test_regression.py +690 -0
- package/assets/featurebench/instance.json +16 -0
- package/assets/featurebench/workspace.zip +0 -0
- package/assets/swe-bench-pro/hidden/test.patch +36 -0
- package/assets/swe-bench-pro/instance.json +10 -0
- package/assets/swe-bench-pro/workspace.zip +0 -0
- package/eval/README.md +18 -0
- package/eval/arena/arena/README.md +21 -0
- package/eval/arena/arena/bt.py +104 -0
- package/eval/arena/arena/clock.py +15 -0
- package/eval/arena/arena/core.py +265 -0
- package/eval/arena/arena/run.cmd +24 -0
- package/eval/arena/arena/run.sh +11 -0
- package/eval/arena/arena/schedule.py +79 -0
- package/eval/arena/arena/tournament.py +183 -0
- package/eval/arena/bomberman/bots/README.md +16 -0
- package/eval/arena/bomberman/bots/deepseek-v4.1-flash.cpp +447 -0
- package/eval/arena/bomberman/bots/doubao-seed-2.1.cpp +542 -0
- package/eval/arena/bomberman/bots/glm-5.3.cpp +406 -0
- package/eval/arena/bomberman/bots/gpt-6-astra.cpp +768 -0
- package/eval/arena/bomberman/bots/gpt-6-sol.cpp +444 -0
- package/eval/arena/bomberman/bots/kimi-k3.cpp +432 -0
- package/eval/arena/bomberman/bots/mimo-v2.6-pro.cpp +529 -0
- package/eval/arena/bomberman/bots/opus-5.5.cpp +548 -0
- package/eval/arena/bomberman/bots/qwen-3.8-max.cpp +836 -0
- package/eval/arena/bomberman/tournament/README.md +11 -0
- package/eval/arena/bomberman/tournament/bt.py +56 -0
- package/eval/arena/bomberman/tournament/evaluate.py +199 -0
- package/eval/arena/bomberman/tournament/run.py +79 -0
- package/eval/arena/bomberman/tournament/schedule-2to10.json.gz +0 -0
- package/eval/arena/bomberman/workspace/MANIFEST.json +13 -0
- package/eval/arena/bomberman/workspace/README.md +29 -0
- package/eval/arena/bomberman/workspace/RULES.md +100 -0
- package/eval/arena/bomberman/workspace/baseline.cpp +240 -0
- package/eval/arena/bomberman/workspace/clock.py +25 -0
- package/eval/arena/bomberman/workspace/engine/arena.py +198 -0
- package/eval/arena/bomberman/workspace/engine/build.py +35 -0
- package/eval/arena/bomberman/workspace/engine/engine.py +256 -0
- package/eval/arena/bomberman/workspace/engine/verify_replay.py +24 -0
- package/eval/arena/bomberman/workspace/run.cmd +28 -0
- package/eval/arena/bomberman/workspace/run.sh +16 -0
- package/eval/arena/bomberman/workspace/viewer/index.html +42 -0
- package/eval/arena/ctf/bots/README.md +18 -0
- package/eval/arena/ctf/bots/deepseek-v4.1-flash.cpp +601 -0
- package/eval/arena/ctf/bots/doubao-seed-2.1-turbo.cpp +320 -0
- package/eval/arena/ctf/bots/fable-5.1.cpp +634 -0
- package/eval/arena/ctf/bots/glm-5.3.cpp +689 -0
- package/eval/arena/ctf/bots/gpt-6-astra.cpp +657 -0
- package/eval/arena/ctf/bots/gpt-6.1-sol.cpp +725 -0
- package/eval/arena/ctf/bots/kimi-k3.cpp +667 -0
- package/eval/arena/ctf/bots/mimo-v2.6-pro.cpp +533 -0
- package/eval/arena/ctf/bots/opus-5.5.cpp +645 -0
- package/eval/arena/ctf/bots/qwen-3.8-max.cpp +726 -0
- package/eval/arena/ctf/bots/sonnet-5.5.cpp +569 -0
- package/eval/arena/ctf/tournament/README.md +15 -0
- package/eval/arena/ctf/tournament/formal-2to8.json +31 -0
- package/eval/arena/ctf/tournament/formal-9to15.json +31 -0
- package/eval/arena/ctf/workspace/README.md +41 -0
- package/eval/arena/ctf/workspace/RULES.md +119 -0
- package/eval/arena/ctf/workspace/arena.py +186 -0
- package/eval/arena/ctf/workspace/baseline.cpp +257 -0
- package/eval/arena/ctf/workspace/clock.py +15 -0
- package/eval/arena/ctf/workspace/core.py +265 -0
- package/eval/arena/ctf/workspace/engine.py +389 -0
- package/eval/arena/ctf/workspace/run.cmd +24 -0
- package/eval/arena/ctf/workspace/run.sh +11 -0
- package/eval/arena/ctf/workspace/viewer.html +71 -0
- package/eval/arena/land/bots/README.md +17 -0
- package/eval/arena/land/bots/deepseek-4.1f@workbuddy#1/bot.cpp +608 -0
- package/eval/arena/land/bots/glm-5.3@workbuddy#1/bot.cpp +521 -0
- package/eval/arena/land/bots/gpt-6-astra@codex#1/bot.cpp +373 -0
- package/eval/arena/land/bots/gpt-6-sol@codex#1/bot.cpp +341 -0
- package/eval/arena/land/bots/kimi-k3@workbuddy#1/bot.cpp +492 -0
- package/eval/arena/land/bots/mimo-2.6-pro@zcode#1/bot.cpp +652 -0
- package/eval/arena/land/bots/mystery-model@zcode#1/bot.cpp +466 -0
- package/eval/arena/land/bots/opus-5.5@claude-code#1/bot.cpp +630 -0
- package/eval/arena/land/bots/sonnet-5@claude-code#1/bot.cpp +619 -0
- package/eval/arena/land/tournament/make_replay_page.py +17 -0
- package/eval/arena/land/tournament/rate.py +290 -0
- package/eval/arena/land/tournament/round_robin.py +172 -0
- package/eval/arena/land/tournament/sparring.cpp +356 -0
- package/eval/arena/land/workspace/RULES.md +114 -0
- package/eval/arena/land/workspace/TASK.md +46 -0
- package/eval/arena/land/workspace/anchors/.build/greedy_f2e6d2dea5ca +0 -0
- package/eval/arena/land/workspace/anchors/greedy.cpp +194 -0
- package/eval/arena/land/workspace/anchors/random.cpp +80 -0
- package/eval/arena/land/workspace/clock.py +64 -0
- package/eval/arena/land/workspace/engine/build.py +33 -0
- package/eval/arena/land/workspace/engine/game.py +273 -0
- package/eval/arena/land/workspace/engine/referee.py +308 -0
- package/eval/arena/land/workspace/starter/.build/bot_be32b45b4699 +0 -0
- package/eval/arena/land/workspace/starter/bot.cpp +82 -0
- package/eval/arena/land/workspace/viewer/viewer.html +210 -0
- package/eval/arena/tank/bots/README.md +24 -0
- package/eval/arena/tank/bots/half1/deepseek-v4.1-flash.cpp +367 -0
- package/eval/arena/tank/bots/half1/doubao-seed-evolving.cpp +402 -0
- package/eval/arena/tank/bots/half1/gemini-4-argon.cpp +1132 -0
- package/eval/arena/tank/bots/half1/glm-5.3.cpp +551 -0
- package/eval/arena/tank/bots/half1/gpt-6-astra.cpp +233 -0
- package/eval/arena/tank/bots/half1/gpt-6.1-sol-ultrafast.cpp +350 -0
- package/eval/arena/tank/bots/half1/gpt-6.1-sol.cpp +78 -0
- package/eval/arena/tank/bots/half1/grok-4.7.cpp +1099 -0
- package/eval/arena/tank/bots/half1/haiku-5.5.cpp +210 -0
- package/eval/arena/tank/bots/half1/kimi-k3.cpp +353 -0
- package/eval/arena/tank/bots/half1/mimo-v2.6-pro.cpp +336 -0
- package/eval/arena/tank/bots/half1/muse-wonder-full.cpp +560 -0
- package/eval/arena/tank/bots/half1/opus-5.5.cpp +435 -0
- package/eval/arena/tank/bots/half1/qwen-3.8-max.cpp +537 -0
- package/eval/arena/tank/bots/half2/deepseek-v4.1-flash.cpp +425 -0
- package/eval/arena/tank/bots/half2/doubao-seed-evolving.cpp +308 -0
- package/eval/arena/tank/bots/half2/gemini-4-argon.cpp +1390 -0
- package/eval/arena/tank/bots/half2/glm-5.3.cpp +651 -0
- package/eval/arena/tank/bots/half2/gpt-6-astra.cpp +241 -0
- package/eval/arena/tank/bots/half2/gpt-6.1-sol-ultrafast.cpp +356 -0
- package/eval/arena/tank/bots/half2/gpt-6.1-sol.cpp +87 -0
- package/eval/arena/tank/bots/half2/grok-4.7.cpp +1205 -0
- package/eval/arena/tank/bots/half2/haiku-5.5.cpp +210 -0
- package/eval/arena/tank/bots/half2/kimi-k3.cpp +487 -0
- package/eval/arena/tank/bots/half2/mimo-v2.6-pro.cpp +336 -0
- package/eval/arena/tank/bots/half2/muse-wonder-full.cpp +560 -0
- package/eval/arena/tank/bots/half2/opus-5.5.cpp +476 -0
- package/eval/arena/tank/bots/half2/qwen-3.8-max.cpp +392 -0
- package/eval/arena/tank/tournament/README.md +24 -0
- package/eval/arena/tank/tournament/bt.py +218 -0
- package/eval/arena/tank/tournament/final.json +202 -0
- package/eval/arena/tank/tournament/halftime.json +146 -0
- package/eval/arena/tank/tournament/progress.json +911 -0
- package/eval/arena/tank/tournament/schedule.py +100 -0
- package/eval/arena/tank/tournament/sparring.cpp +928 -0
- package/eval/arena/tank/tournament/tournament.py +1426 -0
- package/eval/arena/tank/workspace/README.md +169 -0
- package/eval/arena/tank/workspace/RULES.md +443 -0
- package/eval/arena/tank/workspace/arena.py +862 -0
- package/eval/arena/tank/workspace/baseline.cpp +259 -0
- package/eval/arena/tank/workspace/clock.py +103 -0
- package/eval/arena/tank/workspace/core.py +712 -0
- package/eval/arena/tank/workspace/engine.py +573 -0
- package/eval/arena/tank/workspace/history/.lock +0 -0
- package/eval/arena/tank/workspace/history/20261017-193610-08715287f91f-bot.cpp +109 -0
- package/eval/arena/tank/workspace/history/20261017-193619-f00b2d5635fa-gpt-6-astra.cpp +241 -0
- package/eval/arena/tank/workspace/history/20261017-193643-63319e0a2b1a-gpt-6_1-sol-ultrafast.cpp +356 -0
- package/eval/arena/tank/workspace/history/20261017-193647-41c1341d0a8a-gemini-4-argon.cpp +1390 -0
- package/eval/arena/tank/workspace/history/20261017-193652-e34c0f45539a-gpt-6_1-sol.cpp +87 -0
- package/eval/arena/tank/workspace/history/20261017-193654-c026348ce96e-opus-5_5.cpp +476 -0
- package/eval/arena/tank/workspace/history/20261017-193655-4a21366e94d1-muse-wonder-full.cpp +560 -0
- package/eval/arena/tank/workspace/history/20261017-193657-dbc4e9969c52-mimo-v2_6-pro.cpp +336 -0
- package/eval/arena/tank/workspace/history/20261017-193703-723cd036eb31-grok-4_7.cpp +1205 -0
- package/eval/arena/tank/workspace/history/20261017-193707-1ebbb227be68-deepseek-v4_1-flash.cpp +425 -0
- package/eval/arena/tank/workspace/history/20261017-193709-aeb0e7202ad5-doubao-seed-evolving.cpp +308 -0
- package/eval/arena/tank/workspace/history/20261017-193710-b21ebeb9bc76-kimi-k3.cpp +487 -0
- package/eval/arena/tank/workspace/history/20261017-193712-54cd86531905-haiku-5_5.cpp +210 -0
- package/eval/arena/tank/workspace/history/20261017-193714-efdb8e35c0bf-qwen-3_8-max.cpp +392 -0
- package/eval/arena/tank/workspace/history/20261017-193715-681423c23fdb-glm-5_3.cpp +651 -0
- package/eval/arena/tank/workspace/history/20261017-193717-1a8b3c75181d-sparring.cpp +928 -0
- package/eval/arena/tank/workspace/history/20261017-193720-1e0803a541e8-baseline.cpp +259 -0
- package/eval/arena/tank/workspace/history/log.jsonl +103 -0
- package/eval/arena/tank/workspace/judge/cycles.hpp +53 -0
- package/eval/arena/tank/workspace/judge/fast.cpp +337 -0
- package/eval/arena/tank/workspace/judge/referee.cpp +125 -0
- package/eval/arena/tank/workspace/judge/speed.cpp +99 -0
- package/eval/arena/tank/workspace/run.cmd +31 -0
- package/eval/arena/tank/workspace/run.sh +23 -0
- package/eval/arena/tank/workspace/tank.hpp +1762 -0
- package/eval/arena/tank/workspace/tank_main.cpp +215 -0
- package/eval/arena/tank/workspace/viewer.html +1150 -0
- package/eval/arena/warehouse/workspace/SPEC.md +130 -0
- package/eval/arena/warehouse/workspace/TASK.md +71 -0
- package/eval/arena/warehouse/workspace/baseline/common.h +88 -0
- package/eval/arena/warehouse/workspace/baseline/main.cpp +27 -0
- package/eval/arena/warehouse/workspace/baseline/old_stuff.cpp +87 -0
- package/eval/arena/warehouse/workspace/baseline/sim.cpp +427 -0
- package/eval/arena/warehouse/workspace/baseline/util.cpp +220 -0
- package/eval/arena/warehouse/workspace/clock.py +42 -0
- package/eval/arena/warehouse/workspace/src/common.h +88 -0
- package/eval/arena/warehouse/workspace/src/main.cpp +27 -0
- package/eval/arena/warehouse/workspace/src/old_stuff.cpp +87 -0
- package/eval/arena/warehouse/workspace/src/sim.cpp +427 -0
- package/eval/arena/warehouse/workspace/src/util.cpp +220 -0
- package/eval/arena/warehouse/workspace/tools/bench.py +119 -0
- package/eval/arena/warehouse/workspace/tools/check_input.py +161 -0
- package/eval/arena/warehouse/workspace/tools/gen.py +132 -0
- package/eval/arena/warehouse/workspace/tools/measure.py +107 -0
- package/eval/arena/warehouse/workspace/workloads/public/pub_crowded.in +1420 -0
- package/eval/arena/warehouse/workspace/workloads/public/pub_crowded.out +9162 -0
- package/eval/arena/warehouse/workspace/workloads/public/pub_dynamic.in +1465 -0
- package/eval/arena/warehouse/workspace/workloads/public/pub_dynamic.out +3439 -0
- package/eval/arena/warehouse/workspace/workloads/public/pub_flood.in +2757 -0
- package/eval/arena/warehouse/workspace/workloads/public/pub_flood.out +3126 -0
- package/eval/arena/warehouse/workspace/workloads/public/pub_small.in +731 -0
- package/eval/arena/warehouse/workspace/workloads/public/pub_small.out +2578 -0
- package/eval/arena/warehouse/workspace/workloads/public/pub_wide.in +528 -0
- package/eval/arena/warehouse/workspace/workloads/public/pub_wide.out +2026 -0
- package/eval/bomberman.py +20 -0
- package/eval/commit0.py +21 -0
- package/eval/common.py +61 -0
- package/eval/ctf.py +20 -0
- package/eval/featurebench.py +25 -0
- package/eval/land.py +20 -0
- package/eval/legacy/bomberman-prices.json +4 -0
- package/eval/legacy/bomberman.py +161 -0
- package/eval/legacy/commit0.py +91 -0
- package/eval/legacy/ctf-prices.json +4 -0
- package/eval/legacy/ctf.py +178 -0
- package/eval/legacy/featurebench.py +103 -0
- package/eval/legacy/land-prices.json +4 -0
- package/eval/legacy/land.py +177 -0
- package/eval/legacy/swe_bench_pro.py +116 -0
- package/eval/legacy/tank-prices.json +3 -0
- package/eval/legacy/tank.py +408 -0
- package/eval/legacy/warehouse-prices.json +4 -0
- package/eval/legacy/warehouse.py +365 -0
- package/eval/swe-bench-pro.py +25 -0
- package/eval/tank.py +20 -0
- package/eval/warehouse.py +20 -0
- package/lib/client/index.js +376 -63
- package/lib/client/index.js.map +1 -1
- package/lib/index.js +684 -27
- package/package.json +2 -1
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import numpy as np
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import pytest
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try:
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import statsmodels.regression.linear_model as smlm
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def test_establish_variables_from_frame(self):
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p.establish_variables(self.df, x="x", y="y")
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pdt.assert_series_equal(p.x, self.df.x)
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p.establish_variables(None, x=self.df.x, y=self.df.y)
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npt.assert_array_equal(p.x, self.df.x)
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def test_establish_variables_from_mix(self):
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pdt.assert_series_equal(p.x, self.df.x)
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def test_establish_variables_from_bad(self):
|
|
80
|
+
|
|
81
|
+
p = lm._LinearPlotter()
|
|
82
|
+
with pytest.raises(ValueError):
|
|
83
|
+
p.establish_variables(None, x="x", y=self.df.y)
|
|
84
|
+
|
|
85
|
+
def test_dropna(self):
|
|
86
|
+
|
|
87
|
+
p = lm._LinearPlotter()
|
|
88
|
+
p.establish_variables(self.df, x="x", y_na="y_na")
|
|
89
|
+
pdt.assert_series_equal(p.x, self.df.x)
|
|
90
|
+
pdt.assert_series_equal(p.y_na, self.df.y_na)
|
|
91
|
+
|
|
92
|
+
p.dropna("x", "y_na")
|
|
93
|
+
mask = self.df.y_na.notnull()
|
|
94
|
+
pdt.assert_series_equal(p.x, self.df.x[mask])
|
|
95
|
+
pdt.assert_series_equal(p.y_na, self.df.y_na[mask])
|
|
96
|
+
|
|
97
|
+
|
|
98
|
+
class TestRegressionPlotter:
|
|
99
|
+
|
|
100
|
+
rs = np.random.RandomState(49)
|
|
101
|
+
|
|
102
|
+
grid = np.linspace(-3, 3, 30)
|
|
103
|
+
n_boot = 100
|
|
104
|
+
bins_numeric = 3
|
|
105
|
+
bins_given = [-1, 0, 1]
|
|
106
|
+
|
|
107
|
+
df = pd.DataFrame(dict(x=rs.normal(size=60),
|
|
108
|
+
d=rs.randint(-2, 3, 60),
|
|
109
|
+
y=rs.gamma(4, size=60),
|
|
110
|
+
s=np.tile(list(range(6)), 10)))
|
|
111
|
+
df["z"] = df.y + rs.randn(60)
|
|
112
|
+
df["y_na"] = df.y.copy()
|
|
113
|
+
|
|
114
|
+
bw_err = rs.randn(6)[df.s.values] * 2
|
|
115
|
+
df.y += bw_err
|
|
116
|
+
|
|
117
|
+
p = 1 / (1 + np.exp(-(df.x * 2 + rs.randn(60))))
|
|
118
|
+
df["c"] = [rs.binomial(1, p_i) for p_i in p]
|
|
119
|
+
df.loc[[10, 20, 30], 'y_na'] = np.nan
|
|
120
|
+
|
|
121
|
+
def test_variables_from_frame(self):
|
|
122
|
+
|
|
123
|
+
p = lm._RegressionPlotter("x", "y", data=self.df, units="s")
|
|
124
|
+
|
|
125
|
+
pdt.assert_series_equal(p.x, self.df.x)
|
|
126
|
+
pdt.assert_series_equal(p.y, self.df.y)
|
|
127
|
+
pdt.assert_series_equal(p.units, self.df.s)
|
|
128
|
+
pdt.assert_frame_equal(p.data, self.df)
|
|
129
|
+
|
|
130
|
+
def test_variables_from_series(self):
|
|
131
|
+
|
|
132
|
+
p = lm._RegressionPlotter(self.df.x, self.df.y, units=self.df.s)
|
|
133
|
+
|
|
134
|
+
npt.assert_array_equal(p.x, self.df.x)
|
|
135
|
+
npt.assert_array_equal(p.y, self.df.y)
|
|
136
|
+
npt.assert_array_equal(p.units, self.df.s)
|
|
137
|
+
assert p.data is None
|
|
138
|
+
|
|
139
|
+
def test_variables_from_mix(self):
|
|
140
|
+
|
|
141
|
+
p = lm._RegressionPlotter("x", self.df.y + 1, data=self.df)
|
|
142
|
+
|
|
143
|
+
npt.assert_array_equal(p.x, self.df.x)
|
|
144
|
+
npt.assert_array_equal(p.y, self.df.y + 1)
|
|
145
|
+
pdt.assert_frame_equal(p.data, self.df)
|
|
146
|
+
|
|
147
|
+
def test_variables_must_be_1d(self):
|
|
148
|
+
|
|
149
|
+
array_2d = np.random.randn(20, 2)
|
|
150
|
+
array_1d = np.random.randn(20)
|
|
151
|
+
with pytest.raises(ValueError):
|
|
152
|
+
lm._RegressionPlotter(array_2d, array_1d)
|
|
153
|
+
with pytest.raises(ValueError):
|
|
154
|
+
lm._RegressionPlotter(array_1d, array_2d)
|
|
155
|
+
|
|
156
|
+
def test_dropna(self):
|
|
157
|
+
|
|
158
|
+
p = lm._RegressionPlotter("x", "y_na", data=self.df)
|
|
159
|
+
assert len(p.x) == pd.notnull(self.df.y_na).sum()
|
|
160
|
+
|
|
161
|
+
p = lm._RegressionPlotter("x", "y_na", data=self.df, dropna=False)
|
|
162
|
+
assert len(p.x) == len(self.df.y_na)
|
|
163
|
+
|
|
164
|
+
@pytest.mark.parametrize("x,y",
|
|
165
|
+
[([1.5], [2]),
|
|
166
|
+
(np.array([1.5]), np.array([2])),
|
|
167
|
+
(pd.Series(1.5), pd.Series(2))])
|
|
168
|
+
def test_singleton(self, x, y):
|
|
169
|
+
p = lm._RegressionPlotter(x, y)
|
|
170
|
+
assert not p.fit_reg
|
|
171
|
+
|
|
172
|
+
def test_ci(self):
|
|
173
|
+
|
|
174
|
+
p = lm._RegressionPlotter("x", "y", data=self.df, ci=95)
|
|
175
|
+
assert p.ci == 95
|
|
176
|
+
assert p.x_ci == 95
|
|
177
|
+
|
|
178
|
+
p = lm._RegressionPlotter("x", "y", data=self.df, ci=95, x_ci=68)
|
|
179
|
+
assert p.ci == 95
|
|
180
|
+
assert p.x_ci == 68
|
|
181
|
+
|
|
182
|
+
p = lm._RegressionPlotter("x", "y", data=self.df, ci=95, x_ci="sd")
|
|
183
|
+
assert p.ci == 95
|
|
184
|
+
assert p.x_ci == "sd"
|
|
185
|
+
|
|
186
|
+
@pytest.mark.skipif(_no_statsmodels, reason="no statsmodels")
|
|
187
|
+
def test_fast_regression(self):
|
|
188
|
+
|
|
189
|
+
p = lm._RegressionPlotter("x", "y", data=self.df, n_boot=self.n_boot)
|
|
190
|
+
|
|
191
|
+
# Fit with the "fast" function, which just does linear algebra
|
|
192
|
+
yhat_fast, _ = p.fit_fast(self.grid)
|
|
193
|
+
|
|
194
|
+
# Fit using the statsmodels function with an OLS model
|
|
195
|
+
yhat_smod, _ = p.fit_statsmodels(self.grid, smlm.OLS)
|
|
196
|
+
|
|
197
|
+
# Compare the vector of y_hat values
|
|
198
|
+
npt.assert_array_almost_equal(yhat_fast, yhat_smod)
|
|
199
|
+
|
|
200
|
+
@pytest.mark.skipif(_no_statsmodels, reason="no statsmodels")
|
|
201
|
+
def test_regress_poly(self):
|
|
202
|
+
|
|
203
|
+
p = lm._RegressionPlotter("x", "y", data=self.df, n_boot=self.n_boot)
|
|
204
|
+
|
|
205
|
+
# Fit an first-order polynomial
|
|
206
|
+
yhat_poly, _ = p.fit_poly(self.grid, 1)
|
|
207
|
+
|
|
208
|
+
# Fit using the statsmodels function with an OLS model
|
|
209
|
+
yhat_smod, _ = p.fit_statsmodels(self.grid, smlm.OLS)
|
|
210
|
+
|
|
211
|
+
# Compare the vector of y_hat values
|
|
212
|
+
npt.assert_array_almost_equal(yhat_poly, yhat_smod)
|
|
213
|
+
|
|
214
|
+
@pytest.mark.parametrize("option", ["logistic", "robust", "lowess"])
|
|
215
|
+
@pytest.mark.skipif(not _no_statsmodels, reason="statsmodels installed")
|
|
216
|
+
def test_statsmodels_missing_errors(self, long_df, option):
|
|
217
|
+
with pytest.raises(RuntimeError, match=rf"`{option}=True` requires"):
|
|
218
|
+
lm.regplot(long_df, x="x", y="y", **{option: True})
|
|
219
|
+
|
|
220
|
+
def test_regress_logx(self):
|
|
221
|
+
|
|
222
|
+
x = np.arange(1, 10)
|
|
223
|
+
y = np.arange(1, 10)
|
|
224
|
+
grid = np.linspace(1, 10, 100)
|
|
225
|
+
p = lm._RegressionPlotter(x, y, n_boot=self.n_boot)
|
|
226
|
+
|
|
227
|
+
yhat_lin, _ = p.fit_fast(grid)
|
|
228
|
+
yhat_log, _ = p.fit_logx(grid)
|
|
229
|
+
|
|
230
|
+
assert yhat_lin[0] > yhat_log[0]
|
|
231
|
+
assert yhat_log[20] > yhat_lin[20]
|
|
232
|
+
assert yhat_lin[90] > yhat_log[90]
|
|
233
|
+
|
|
234
|
+
@pytest.mark.skipif(_no_statsmodels, reason="no statsmodels")
|
|
235
|
+
def test_regress_n_boot(self):
|
|
236
|
+
|
|
237
|
+
p = lm._RegressionPlotter("x", "y", data=self.df, n_boot=self.n_boot)
|
|
238
|
+
|
|
239
|
+
# Fast (linear algebra) version
|
|
240
|
+
_, boots_fast = p.fit_fast(self.grid)
|
|
241
|
+
npt.assert_equal(boots_fast.shape, (self.n_boot, self.grid.size))
|
|
242
|
+
|
|
243
|
+
# Slower (np.polyfit) version
|
|
244
|
+
_, boots_poly = p.fit_poly(self.grid, 1)
|
|
245
|
+
npt.assert_equal(boots_poly.shape, (self.n_boot, self.grid.size))
|
|
246
|
+
|
|
247
|
+
# Slowest (statsmodels) version
|
|
248
|
+
_, boots_smod = p.fit_statsmodels(self.grid, smlm.OLS)
|
|
249
|
+
npt.assert_equal(boots_smod.shape, (self.n_boot, self.grid.size))
|
|
250
|
+
|
|
251
|
+
@pytest.mark.skipif(_no_statsmodels, reason="no statsmodels")
|
|
252
|
+
def test_regress_without_bootstrap(self):
|
|
253
|
+
|
|
254
|
+
p = lm._RegressionPlotter("x", "y", data=self.df,
|
|
255
|
+
n_boot=self.n_boot, ci=None)
|
|
256
|
+
|
|
257
|
+
# Fast (linear algebra) version
|
|
258
|
+
_, boots_fast = p.fit_fast(self.grid)
|
|
259
|
+
assert boots_fast is None
|
|
260
|
+
|
|
261
|
+
# Slower (np.polyfit) version
|
|
262
|
+
_, boots_poly = p.fit_poly(self.grid, 1)
|
|
263
|
+
assert boots_poly is None
|
|
264
|
+
|
|
265
|
+
# Slowest (statsmodels) version
|
|
266
|
+
_, boots_smod = p.fit_statsmodels(self.grid, smlm.OLS)
|
|
267
|
+
assert boots_smod is None
|
|
268
|
+
|
|
269
|
+
def test_regress_bootstrap_seed(self):
|
|
270
|
+
|
|
271
|
+
seed = 200
|
|
272
|
+
p1 = lm._RegressionPlotter("x", "y", data=self.df,
|
|
273
|
+
n_boot=self.n_boot, seed=seed)
|
|
274
|
+
p2 = lm._RegressionPlotter("x", "y", data=self.df,
|
|
275
|
+
n_boot=self.n_boot, seed=seed)
|
|
276
|
+
|
|
277
|
+
_, boots1 = p1.fit_fast(self.grid)
|
|
278
|
+
_, boots2 = p2.fit_fast(self.grid)
|
|
279
|
+
npt.assert_array_equal(boots1, boots2)
|
|
280
|
+
|
|
281
|
+
def test_numeric_bins(self):
|
|
282
|
+
|
|
283
|
+
p = lm._RegressionPlotter(self.df.x, self.df.y)
|
|
284
|
+
x_binned, bins = p.bin_predictor(self.bins_numeric)
|
|
285
|
+
npt.assert_equal(len(bins), self.bins_numeric)
|
|
286
|
+
npt.assert_array_equal(np.unique(x_binned), bins)
|
|
287
|
+
|
|
288
|
+
def test_provided_bins(self):
|
|
289
|
+
|
|
290
|
+
p = lm._RegressionPlotter(self.df.x, self.df.y)
|
|
291
|
+
x_binned, bins = p.bin_predictor(self.bins_given)
|
|
292
|
+
npt.assert_array_equal(np.unique(x_binned), self.bins_given)
|
|
293
|
+
|
|
294
|
+
def test_bin_results(self):
|
|
295
|
+
|
|
296
|
+
p = lm._RegressionPlotter(self.df.x, self.df.y)
|
|
297
|
+
x_binned, bins = p.bin_predictor(self.bins_given)
|
|
298
|
+
assert self.df.x[x_binned == 0].min() > self.df.x[x_binned == -1].max()
|
|
299
|
+
assert self.df.x[x_binned == 1].min() > self.df.x[x_binned == 0].max()
|
|
300
|
+
|
|
301
|
+
def test_scatter_data(self):
|
|
302
|
+
|
|
303
|
+
p = lm._RegressionPlotter(self.df.x, self.df.y)
|
|
304
|
+
x, y = p.scatter_data
|
|
305
|
+
npt.assert_array_equal(x, self.df.x)
|
|
306
|
+
npt.assert_array_equal(y, self.df.y)
|
|
307
|
+
|
|
308
|
+
p = lm._RegressionPlotter(self.df.d, self.df.y)
|
|
309
|
+
x, y = p.scatter_data
|
|
310
|
+
npt.assert_array_equal(x, self.df.d)
|
|
311
|
+
npt.assert_array_equal(y, self.df.y)
|
|
312
|
+
|
|
313
|
+
p = lm._RegressionPlotter(self.df.d, self.df.y, x_jitter=.1)
|
|
314
|
+
x, y = p.scatter_data
|
|
315
|
+
assert (x != self.df.d).any()
|
|
316
|
+
npt.assert_array_less(np.abs(self.df.d - x), np.repeat(.1, len(x)))
|
|
317
|
+
npt.assert_array_equal(y, self.df.y)
|
|
318
|
+
|
|
319
|
+
p = lm._RegressionPlotter(self.df.d, self.df.y, y_jitter=.05)
|
|
320
|
+
x, y = p.scatter_data
|
|
321
|
+
npt.assert_array_equal(x, self.df.d)
|
|
322
|
+
npt.assert_array_less(np.abs(self.df.y - y), np.repeat(.1, len(y)))
|
|
323
|
+
|
|
324
|
+
def test_estimate_data(self):
|
|
325
|
+
|
|
326
|
+
p = lm._RegressionPlotter(self.df.d, self.df.y, x_estimator=np.mean)
|
|
327
|
+
|
|
328
|
+
x, y, ci = p.estimate_data
|
|
329
|
+
|
|
330
|
+
npt.assert_array_equal(x, np.sort(np.unique(self.df.d)))
|
|
331
|
+
npt.assert_array_almost_equal(y, self.df.groupby("d").y.mean())
|
|
332
|
+
npt.assert_array_less(np.array(ci)[:, 0], y)
|
|
333
|
+
npt.assert_array_less(y, np.array(ci)[:, 1])
|
|
334
|
+
|
|
335
|
+
def test_estimate_cis(self):
|
|
336
|
+
|
|
337
|
+
seed = 123
|
|
338
|
+
|
|
339
|
+
p = lm._RegressionPlotter(self.df.d, self.df.y,
|
|
340
|
+
x_estimator=np.mean, ci=95, seed=seed)
|
|
341
|
+
_, _, ci_big = p.estimate_data
|
|
342
|
+
|
|
343
|
+
p = lm._RegressionPlotter(self.df.d, self.df.y,
|
|
344
|
+
x_estimator=np.mean, ci=50, seed=seed)
|
|
345
|
+
_, _, ci_wee = p.estimate_data
|
|
346
|
+
npt.assert_array_less(np.diff(ci_wee), np.diff(ci_big))
|
|
347
|
+
|
|
348
|
+
p = lm._RegressionPlotter(self.df.d, self.df.y,
|
|
349
|
+
x_estimator=np.mean, ci=None)
|
|
350
|
+
_, _, ci_nil = p.estimate_data
|
|
351
|
+
npt.assert_array_equal(ci_nil, [None] * len(ci_nil))
|
|
352
|
+
|
|
353
|
+
def test_estimate_units(self):
|
|
354
|
+
|
|
355
|
+
# Seed the RNG locally
|
|
356
|
+
seed = 345
|
|
357
|
+
|
|
358
|
+
p = lm._RegressionPlotter("x", "y", data=self.df,
|
|
359
|
+
units="s", seed=seed, x_bins=3)
|
|
360
|
+
_, _, ci_big = p.estimate_data
|
|
361
|
+
ci_big = np.diff(ci_big, axis=1)
|
|
362
|
+
|
|
363
|
+
p = lm._RegressionPlotter("x", "y", data=self.df, seed=seed, x_bins=3)
|
|
364
|
+
_, _, ci_wee = p.estimate_data
|
|
365
|
+
ci_wee = np.diff(ci_wee, axis=1)
|
|
366
|
+
|
|
367
|
+
npt.assert_array_less(ci_wee, ci_big)
|
|
368
|
+
|
|
369
|
+
def test_partial(self):
|
|
370
|
+
|
|
371
|
+
x = self.rs.randn(100)
|
|
372
|
+
y = x + self.rs.randn(100)
|
|
373
|
+
z = x + self.rs.randn(100)
|
|
374
|
+
|
|
375
|
+
p = lm._RegressionPlotter(y, z)
|
|
376
|
+
_, r_orig = np.corrcoef(p.x, p.y)[0]
|
|
377
|
+
|
|
378
|
+
p = lm._RegressionPlotter(y, z, y_partial=x)
|
|
379
|
+
_, r_semipartial = np.corrcoef(p.x, p.y)[0]
|
|
380
|
+
assert r_semipartial < r_orig
|
|
381
|
+
|
|
382
|
+
p = lm._RegressionPlotter(y, z, x_partial=x, y_partial=x)
|
|
383
|
+
_, r_partial = np.corrcoef(p.x, p.y)[0]
|
|
384
|
+
assert r_partial < r_orig
|
|
385
|
+
|
|
386
|
+
x = pd.Series(x)
|
|
387
|
+
y = pd.Series(y)
|
|
388
|
+
p = lm._RegressionPlotter(y, z, x_partial=x, y_partial=x)
|
|
389
|
+
_, r_partial = np.corrcoef(p.x, p.y)[0]
|
|
390
|
+
assert r_partial < r_orig
|
|
391
|
+
|
|
392
|
+
@pytest.mark.skipif(_no_statsmodels, reason="no statsmodels")
|
|
393
|
+
def test_logistic_regression(self):
|
|
394
|
+
|
|
395
|
+
p = lm._RegressionPlotter("x", "c", data=self.df,
|
|
396
|
+
logistic=True, n_boot=self.n_boot)
|
|
397
|
+
_, yhat, _ = p.fit_regression(x_range=(-3, 3))
|
|
398
|
+
npt.assert_array_less(yhat, 1)
|
|
399
|
+
npt.assert_array_less(0, yhat)
|
|
400
|
+
|
|
401
|
+
@pytest.mark.skipif(_no_statsmodels, reason="no statsmodels")
|
|
402
|
+
def test_logistic_perfect_separation(self):
|
|
403
|
+
|
|
404
|
+
y = self.df.x > self.df.x.mean()
|
|
405
|
+
p = lm._RegressionPlotter("x", y, data=self.df,
|
|
406
|
+
logistic=True, n_boot=10)
|
|
407
|
+
with warnings.catch_warnings():
|
|
408
|
+
warnings.simplefilter("ignore", RuntimeWarning)
|
|
409
|
+
_, yhat, _ = p.fit_regression(x_range=(-3, 3))
|
|
410
|
+
assert np.isnan(yhat).all()
|
|
411
|
+
|
|
412
|
+
@pytest.mark.skipif(_no_statsmodels, reason="no statsmodels")
|
|
413
|
+
def test_robust_regression(self):
|
|
414
|
+
|
|
415
|
+
p_ols = lm._RegressionPlotter("x", "y", data=self.df,
|
|
416
|
+
n_boot=self.n_boot)
|
|
417
|
+
_, ols_yhat, _ = p_ols.fit_regression(x_range=(-3, 3))
|
|
418
|
+
|
|
419
|
+
p_robust = lm._RegressionPlotter("x", "y", data=self.df,
|
|
420
|
+
robust=True, n_boot=self.n_boot)
|
|
421
|
+
_, robust_yhat, _ = p_robust.fit_regression(x_range=(-3, 3))
|
|
422
|
+
|
|
423
|
+
assert len(ols_yhat) == len(robust_yhat)
|
|
424
|
+
|
|
425
|
+
@pytest.mark.skipif(_no_statsmodels, reason="no statsmodels")
|
|
426
|
+
def test_lowess_regression(self):
|
|
427
|
+
|
|
428
|
+
p = lm._RegressionPlotter("x", "y", data=self.df, lowess=True)
|
|
429
|
+
grid, yhat, err_bands = p.fit_regression(x_range=(-3, 3))
|
|
430
|
+
|
|
431
|
+
assert len(grid) == len(yhat)
|
|
432
|
+
assert err_bands is None
|
|
433
|
+
|
|
434
|
+
def test_regression_options(self):
|
|
435
|
+
|
|
436
|
+
with pytest.raises(ValueError):
|
|
437
|
+
lm._RegressionPlotter("x", "y", data=self.df,
|
|
438
|
+
lowess=True, order=2)
|
|
439
|
+
|
|
440
|
+
with pytest.raises(ValueError):
|
|
441
|
+
lm._RegressionPlotter("x", "y", data=self.df,
|
|
442
|
+
lowess=True, logistic=True)
|
|
443
|
+
|
|
444
|
+
def test_regression_limits(self):
|
|
445
|
+
|
|
446
|
+
f, ax = plt.subplots()
|
|
447
|
+
ax.scatter(self.df.x, self.df.y)
|
|
448
|
+
p = lm._RegressionPlotter("x", "y", data=self.df)
|
|
449
|
+
grid, _, _ = p.fit_regression(ax)
|
|
450
|
+
xlim = ax.get_xlim()
|
|
451
|
+
assert grid.min() == xlim[0]
|
|
452
|
+
assert grid.max() == xlim[1]
|
|
453
|
+
|
|
454
|
+
p = lm._RegressionPlotter("x", "y", data=self.df, truncate=True)
|
|
455
|
+
grid, _, _ = p.fit_regression()
|
|
456
|
+
assert grid.min() == self.df.x.min()
|
|
457
|
+
assert grid.max() == self.df.x.max()
|
|
458
|
+
|
|
459
|
+
|
|
460
|
+
class TestRegressionPlots:
|
|
461
|
+
|
|
462
|
+
rs = np.random.RandomState(56)
|
|
463
|
+
df = pd.DataFrame(dict(x=rs.randn(90),
|
|
464
|
+
y=rs.randn(90) + 5,
|
|
465
|
+
z=rs.randint(0, 1, 90),
|
|
466
|
+
g=np.repeat(list("abc"), 30),
|
|
467
|
+
h=np.tile(list("xy"), 45),
|
|
468
|
+
u=np.tile(np.arange(6), 15)))
|
|
469
|
+
bw_err = rs.randn(6)[df.u.values]
|
|
470
|
+
df.y += bw_err
|
|
471
|
+
|
|
472
|
+
def test_regplot_basic(self):
|
|
473
|
+
|
|
474
|
+
f, ax = plt.subplots()
|
|
475
|
+
lm.regplot(x="x", y="y", data=self.df)
|
|
476
|
+
assert len(ax.lines) == 1
|
|
477
|
+
assert len(ax.collections) == 2
|
|
478
|
+
|
|
479
|
+
x, y = ax.collections[0].get_offsets().T
|
|
480
|
+
npt.assert_array_equal(x, self.df.x)
|
|
481
|
+
npt.assert_array_equal(y, self.df.y)
|
|
482
|
+
|
|
483
|
+
def test_regplot_selective(self):
|
|
484
|
+
|
|
485
|
+
f, ax = plt.subplots()
|
|
486
|
+
ax = lm.regplot(x="x", y="y", data=self.df, scatter=False, ax=ax)
|
|
487
|
+
assert len(ax.lines) == 1
|
|
488
|
+
assert len(ax.collections) == 1
|
|
489
|
+
ax.clear()
|
|
490
|
+
|
|
491
|
+
f, ax = plt.subplots()
|
|
492
|
+
ax = lm.regplot(x="x", y="y", data=self.df, fit_reg=False)
|
|
493
|
+
assert len(ax.lines) == 0
|
|
494
|
+
assert len(ax.collections) == 1
|
|
495
|
+
ax.clear()
|
|
496
|
+
|
|
497
|
+
f, ax = plt.subplots()
|
|
498
|
+
ax = lm.regplot(x="x", y="y", data=self.df, ci=None)
|
|
499
|
+
assert len(ax.lines) == 1
|
|
500
|
+
assert len(ax.collections) == 1
|
|
501
|
+
ax.clear()
|
|
502
|
+
|
|
503
|
+
def test_regplot_scatter_kws_alpha(self):
|
|
504
|
+
|
|
505
|
+
f, ax = plt.subplots()
|
|
506
|
+
color = np.array([[0.3, 0.8, 0.5, 0.5]])
|
|
507
|
+
ax = lm.regplot(x="x", y="y", data=self.df,
|
|
508
|
+
scatter_kws={'color': color})
|
|
509
|
+
assert ax.collections[0]._alpha is None
|
|
510
|
+
assert ax.collections[0]._facecolors[0, 3] == 0.5
|
|
511
|
+
|
|
512
|
+
f, ax = plt.subplots()
|
|
513
|
+
color = np.array([[0.3, 0.8, 0.5]])
|
|
514
|
+
ax = lm.regplot(x="x", y="y", data=self.df,
|
|
515
|
+
scatter_kws={'color': color})
|
|
516
|
+
assert ax.collections[0]._alpha == 0.8
|
|
517
|
+
|
|
518
|
+
f, ax = plt.subplots()
|
|
519
|
+
color = np.array([[0.3, 0.8, 0.5]])
|
|
520
|
+
ax = lm.regplot(x="x", y="y", data=self.df,
|
|
521
|
+
scatter_kws={'color': color, 'alpha': 0.4})
|
|
522
|
+
assert ax.collections[0]._alpha == 0.4
|
|
523
|
+
|
|
524
|
+
f, ax = plt.subplots()
|
|
525
|
+
color = 'r'
|
|
526
|
+
ax = lm.regplot(x="x", y="y", data=self.df,
|
|
527
|
+
scatter_kws={'color': color})
|
|
528
|
+
assert ax.collections[0]._alpha == 0.8
|
|
529
|
+
|
|
530
|
+
f, ax = plt.subplots()
|
|
531
|
+
alpha = .3
|
|
532
|
+
ax = lm.regplot(x="x", y="y", data=self.df,
|
|
533
|
+
x_bins=5, fit_reg=False,
|
|
534
|
+
scatter_kws={"alpha": alpha})
|
|
535
|
+
for line in ax.lines:
|
|
536
|
+
assert line.get_alpha() == alpha
|
|
537
|
+
|
|
538
|
+
def test_regplot_binned(self):
|
|
539
|
+
|
|
540
|
+
ax = lm.regplot(x="x", y="y", data=self.df, x_bins=5)
|
|
541
|
+
assert len(ax.lines) == 6
|
|
542
|
+
assert len(ax.collections) == 2
|
|
543
|
+
|
|
544
|
+
def test_lmplot_no_data(self):
|
|
545
|
+
|
|
546
|
+
with pytest.raises(TypeError):
|
|
547
|
+
# keyword argument `data` is required
|
|
548
|
+
lm.lmplot(x="x", y="y")
|
|
549
|
+
|
|
550
|
+
def test_lmplot_basic(self):
|
|
551
|
+
|
|
552
|
+
g = lm.lmplot(x="x", y="y", data=self.df)
|
|
553
|
+
ax = g.axes[0, 0]
|
|
554
|
+
assert len(ax.lines) == 1
|
|
555
|
+
assert len(ax.collections) == 2
|
|
556
|
+
|
|
557
|
+
x, y = ax.collections[0].get_offsets().T
|
|
558
|
+
npt.assert_array_equal(x, self.df.x)
|
|
559
|
+
npt.assert_array_equal(y, self.df.y)
|
|
560
|
+
|
|
561
|
+
def test_lmplot_hue(self):
|
|
562
|
+
|
|
563
|
+
g = lm.lmplot(x="x", y="y", data=self.df, hue="h")
|
|
564
|
+
ax = g.axes[0, 0]
|
|
565
|
+
|
|
566
|
+
assert len(ax.lines) == 2
|
|
567
|
+
assert len(ax.collections) == 4
|
|
568
|
+
|
|
569
|
+
def test_lmplot_markers(self):
|
|
570
|
+
|
|
571
|
+
g1 = lm.lmplot(x="x", y="y", data=self.df, hue="h", markers="s")
|
|
572
|
+
assert g1.hue_kws == {"marker": ["s", "s"]}
|
|
573
|
+
|
|
574
|
+
g2 = lm.lmplot(x="x", y="y", data=self.df, hue="h", markers=["o", "s"])
|
|
575
|
+
assert g2.hue_kws == {"marker": ["o", "s"]}
|
|
576
|
+
|
|
577
|
+
with pytest.raises(ValueError):
|
|
578
|
+
lm.lmplot(x="x", y="y", data=self.df, hue="h",
|
|
579
|
+
markers=["o", "s", "d"])
|
|
580
|
+
|
|
581
|
+
def test_lmplot_marker_linewidths(self):
|
|
582
|
+
|
|
583
|
+
g = lm.lmplot(x="x", y="y", data=self.df, hue="h",
|
|
584
|
+
fit_reg=False, markers=["o", "+"])
|
|
585
|
+
c = g.axes[0, 0].collections
|
|
586
|
+
assert c[1].get_linewidths()[0] == mpl.rcParams["lines.linewidth"]
|
|
587
|
+
|
|
588
|
+
def test_lmplot_facets(self):
|
|
589
|
+
|
|
590
|
+
g = lm.lmplot(x="x", y="y", data=self.df, row="g", col="h")
|
|
591
|
+
assert g.axes.shape == (3, 2)
|
|
592
|
+
|
|
593
|
+
g = lm.lmplot(x="x", y="y", data=self.df, col="u", col_wrap=4)
|
|
594
|
+
assert g.axes.shape == (6,)
|
|
595
|
+
|
|
596
|
+
g = lm.lmplot(x="x", y="y", data=self.df, hue="h", col="u")
|
|
597
|
+
assert g.axes.shape == (1, 6)
|
|
598
|
+
|
|
599
|
+
def test_lmplot_hue_col_nolegend(self):
|
|
600
|
+
|
|
601
|
+
g = lm.lmplot(x="x", y="y", data=self.df, col="h", hue="h")
|
|
602
|
+
assert g._legend is None
|
|
603
|
+
|
|
604
|
+
def test_lmplot_scatter_kws(self):
|
|
605
|
+
|
|
606
|
+
g = lm.lmplot(x="x", y="y", hue="h", data=self.df, ci=None)
|
|
607
|
+
red_scatter, blue_scatter = g.axes[0, 0].collections
|
|
608
|
+
|
|
609
|
+
red, blue = color_palette(n_colors=2)
|
|
610
|
+
npt.assert_array_equal(red, red_scatter.get_facecolors()[0, :3])
|
|
611
|
+
npt.assert_array_equal(blue, blue_scatter.get_facecolors()[0, :3])
|
|
612
|
+
|
|
613
|
+
@pytest.mark.parametrize("sharex", [True, False])
|
|
614
|
+
def test_lmplot_facet_truncate(self, sharex):
|
|
615
|
+
|
|
616
|
+
g = lm.lmplot(
|
|
617
|
+
data=self.df, x="x", y="y", hue="g", col="h",
|
|
618
|
+
truncate=False, facet_kws=dict(sharex=sharex),
|
|
619
|
+
)
|
|
620
|
+
|
|
621
|
+
for ax in g.axes.flat:
|
|
622
|
+
for line in ax.lines:
|
|
623
|
+
xdata = line.get_xdata()
|
|
624
|
+
assert ax.get_xlim() == tuple(xdata[[0, -1]])
|
|
625
|
+
|
|
626
|
+
def test_lmplot_sharey(self):
|
|
627
|
+
|
|
628
|
+
df = pd.DataFrame(dict(
|
|
629
|
+
x=[0, 1, 2, 0, 1, 2],
|
|
630
|
+
y=[1, -1, 0, -100, 200, 0],
|
|
631
|
+
z=["a", "a", "a", "b", "b", "b"],
|
|
632
|
+
))
|
|
633
|
+
|
|
634
|
+
with pytest.warns(UserWarning):
|
|
635
|
+
g = lm.lmplot(data=df, x="x", y="y", col="z", sharey=False)
|
|
636
|
+
ax1, ax2 = g.axes.flat
|
|
637
|
+
assert ax1.get_ylim()[0] > ax2.get_ylim()[0]
|
|
638
|
+
assert ax1.get_ylim()[1] < ax2.get_ylim()[1]
|
|
639
|
+
|
|
640
|
+
def test_lmplot_facet_kws(self):
|
|
641
|
+
|
|
642
|
+
xlim = -4, 20
|
|
643
|
+
g = lm.lmplot(
|
|
644
|
+
data=self.df, x="x", y="y", col="h", facet_kws={"xlim": xlim}
|
|
645
|
+
)
|
|
646
|
+
for ax in g.axes.flat:
|
|
647
|
+
assert ax.get_xlim() == xlim
|
|
648
|
+
|
|
649
|
+
def test_residplot(self):
|
|
650
|
+
|
|
651
|
+
x, y = self.df.x, self.df.y
|
|
652
|
+
ax = lm.residplot(x=x, y=y)
|
|
653
|
+
|
|
654
|
+
resid = y - np.polyval(np.polyfit(x, y, 1), x)
|
|
655
|
+
x_plot, y_plot = ax.collections[0].get_offsets().T
|
|
656
|
+
|
|
657
|
+
npt.assert_array_equal(x, x_plot)
|
|
658
|
+
npt.assert_array_almost_equal(resid, y_plot)
|
|
659
|
+
|
|
660
|
+
@pytest.mark.skipif(_no_statsmodels, reason="no statsmodels")
|
|
661
|
+
def test_residplot_lowess(self):
|
|
662
|
+
|
|
663
|
+
ax = lm.residplot(x="x", y="y", data=self.df, lowess=True)
|
|
664
|
+
assert len(ax.lines) == 2
|
|
665
|
+
|
|
666
|
+
x, y = ax.lines[1].get_xydata().T
|
|
667
|
+
npt.assert_array_equal(x, np.sort(self.df.x))
|
|
668
|
+
|
|
669
|
+
@pytest.mark.parametrize("option", ["robust", "lowess"])
|
|
670
|
+
@pytest.mark.skipif(not _no_statsmodels, reason="statsmodels installed")
|
|
671
|
+
def test_residplot_statsmodels_missing_errors(self, long_df, option):
|
|
672
|
+
with pytest.raises(RuntimeError, match=rf"`{option}=True` requires"):
|
|
673
|
+
lm.residplot(long_df, x="x", y="y", **{option: True})
|
|
674
|
+
|
|
675
|
+
def test_three_point_colors(self):
|
|
676
|
+
|
|
677
|
+
x, y = np.random.randn(2, 3)
|
|
678
|
+
ax = lm.regplot(x=x, y=y, color=(1, 0, 0))
|
|
679
|
+
color = ax.collections[0].get_facecolors()
|
|
680
|
+
npt.assert_almost_equal(color[0, :3],
|
|
681
|
+
(1, 0, 0))
|
|
682
|
+
|
|
683
|
+
def test_regplot_xlim(self):
|
|
684
|
+
|
|
685
|
+
f, ax = plt.subplots()
|
|
686
|
+
x, y1, y2 = np.random.randn(3, 50)
|
|
687
|
+
lm.regplot(x=x, y=y1, truncate=False)
|
|
688
|
+
lm.regplot(x=x, y=y2, truncate=False)
|
|
689
|
+
line1, line2 = ax.lines
|
|
690
|
+
assert np.array_equal(line1.get_xdata(), line2.get_xdata())
|