arctrl 3.0.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (511) hide show
  1. arctrl/__init__.py +23 -0
  2. arctrl/cwl.py +12 -0
  3. arctrl/py/CWL/__init__.py +0 -0
  4. arctrl/py/CWL/cwlprocessing_unit.py +221 -0
  5. arctrl/py/CWL/cwltypes.py +364 -0
  6. arctrl/py/CWL/decode.py +3532 -0
  7. arctrl/py/CWL/encode.py +1905 -0
  8. arctrl/py/CWL/expression_tool_description.py +192 -0
  9. arctrl/py/CWL/hash_helpers.py +60 -0
  10. arctrl/py/CWL/inputs.py +122 -0
  11. arctrl/py/CWL/operation_description.py +169 -0
  12. arctrl/py/CWL/outputs.py +171 -0
  13. arctrl/py/CWL/parameter_reference.py +74 -0
  14. arctrl/py/CWL/requirements.py +350 -0
  15. arctrl/py/CWL/tool_description.py +192 -0
  16. arctrl/py/CWL/workflow_description.py +181 -0
  17. arctrl/py/CWL/workflow_steps.py +354 -0
  18. arctrl/py/Contract/__init__.py +0 -0
  19. arctrl/py/Contract/arc.py +89 -0
  20. arctrl/py/Contract/arc_assay.py +125 -0
  21. arctrl/py/Contract/arc_investigation.py +88 -0
  22. arctrl/py/Contract/arc_run.py +291 -0
  23. arctrl/py/Contract/arc_study.py +126 -0
  24. arctrl/py/Contract/arc_workflow.py +213 -0
  25. arctrl/py/Contract/contract.py +153 -0
  26. arctrl/py/Contract/datamap.py +396 -0
  27. arctrl/py/Contract/git.py +116 -0
  28. arctrl/py/Contract/license.py +58 -0
  29. arctrl/py/Contract/validation_packages_config.py +107 -0
  30. arctrl/py/ContractIO/__init__.py +0 -0
  31. arctrl/py/ContractIO/contract_io.py +350 -0
  32. arctrl/py/ContractIO/file_system_helper.py +264 -0
  33. arctrl/py/Conversion/__init__.py +0 -0
  34. arctrl/py/Conversion/assay.py +151 -0
  35. arctrl/py/Conversion/basic.py +559 -0
  36. arctrl/py/Conversion/column_index.py +91 -0
  37. arctrl/py/Conversion/datamap.py +36 -0
  38. arctrl/py/Conversion/date_time.py +32 -0
  39. arctrl/py/Conversion/investigation.py +171 -0
  40. arctrl/py/Conversion/person.py +148 -0
  41. arctrl/py/Conversion/process.py +828 -0
  42. arctrl/py/Conversion/run.py +367 -0
  43. arctrl/py/Conversion/scholarly_article.py +163 -0
  44. arctrl/py/Conversion/study.py +99 -0
  45. arctrl/py/Conversion/table.py +229 -0
  46. arctrl/py/Conversion/workflow.py +680 -0
  47. arctrl/py/Core/Helper/__init__.py +0 -0
  48. arctrl/py/Core/Helper/collections_.py +512 -0
  49. arctrl/py/Core/Helper/date_time.py +26 -0
  50. arctrl/py/Core/Helper/hash_codes.py +60 -0
  51. arctrl/py/Core/Helper/identifier.py +290 -0
  52. arctrl/py/Core/Helper/orcid.py +42 -0
  53. arctrl/py/Core/Helper/printer.py +13 -0
  54. arctrl/py/Core/Helper/regex.py +554 -0
  55. arctrl/py/Core/Helper/sem_ver.py +71 -0
  56. arctrl/py/Core/Helper/url.py +148 -0
  57. arctrl/py/Core/Process/__init__.py +0 -0
  58. arctrl/py/Core/Process/column_index.py +280 -0
  59. arctrl/py/Core/Process/component.py +200 -0
  60. arctrl/py/Core/Process/factor.py +151 -0
  61. arctrl/py/Core/Process/factor_value.py +182 -0
  62. arctrl/py/Core/Process/material.py +74 -0
  63. arctrl/py/Core/Process/material_attribute.py +95 -0
  64. arctrl/py/Core/Process/material_attribute_value.py +184 -0
  65. arctrl/py/Core/Process/material_type.py +45 -0
  66. arctrl/py/Core/Process/process.py +477 -0
  67. arctrl/py/Core/Process/process_input.py +265 -0
  68. arctrl/py/Core/Process/process_output.py +235 -0
  69. arctrl/py/Core/Process/process_parameter_value.py +200 -0
  70. arctrl/py/Core/Process/process_sequence.py +435 -0
  71. arctrl/py/Core/Process/protocol.py +175 -0
  72. arctrl/py/Core/Process/protocol_parameter.py +98 -0
  73. arctrl/py/Core/Process/sample.py +82 -0
  74. arctrl/py/Core/Process/source.py +62 -0
  75. arctrl/py/Core/Table/__init__.py +0 -0
  76. arctrl/py/Core/Table/arc_table.py +1206 -0
  77. arctrl/py/Core/Table/arc_table_aux.py +1308 -0
  78. arctrl/py/Core/Table/arc_tables.py +574 -0
  79. arctrl/py/Core/Table/composite_cell.py +319 -0
  80. arctrl/py/Core/Table/composite_column.py +73 -0
  81. arctrl/py/Core/Table/composite_header.py +739 -0
  82. arctrl/py/Core/__init__.py +0 -0
  83. arctrl/py/Core/arc_types.py +5312 -0
  84. arctrl/py/Core/comment.py +128 -0
  85. arctrl/py/Core/comment_list.py +127 -0
  86. arctrl/py/Core/conversion.py +1375 -0
  87. arctrl/py/Core/data.py +247 -0
  88. arctrl/py/Core/data_context.py +157 -0
  89. arctrl/py/Core/data_file.py +112 -0
  90. arctrl/py/Core/datamap.py +217 -0
  91. arctrl/py/Core/identifier_setters.py +43 -0
  92. arctrl/py/Core/iproperty_value.py +36 -0
  93. arctrl/py/Core/ontology_annotation.py +298 -0
  94. arctrl/py/Core/ontology_source_reference.py +114 -0
  95. arctrl/py/Core/person.py +259 -0
  96. arctrl/py/Core/publication.py +161 -0
  97. arctrl/py/Core/template.py +231 -0
  98. arctrl/py/Core/templates.py +148 -0
  99. arctrl/py/Core/uri.py +11 -0
  100. arctrl/py/Core/value.py +188 -0
  101. arctrl/py/FileSystem/__init__.py +0 -0
  102. arctrl/py/FileSystem/commit.py +21 -0
  103. arctrl/py/FileSystem/default_gitattributes.py +1 -0
  104. arctrl/py/FileSystem/default_gitignore.py +1 -0
  105. arctrl/py/FileSystem/default_license.py +1 -0
  106. arctrl/py/FileSystem/file_system.py +58 -0
  107. arctrl/py/FileSystem/file_system_tree.py +483 -0
  108. arctrl/py/FileSystem/path.py +266 -0
  109. arctrl/py/Json/Datamap/__init__.py +0 -0
  110. arctrl/py/Json/Datamap/data_context.py +101 -0
  111. arctrl/py/Json/Datamap/datamap.py +53 -0
  112. arctrl/py/Json/Process/__init__.py +0 -0
  113. arctrl/py/Json/Process/assay_materials.py +46 -0
  114. arctrl/py/Json/Process/component.py +125 -0
  115. arctrl/py/Json/Process/factor.py +107 -0
  116. arctrl/py/Json/Process/factor_value.py +101 -0
  117. arctrl/py/Json/Process/material.py +226 -0
  118. arctrl/py/Json/Process/material_attribute.py +79 -0
  119. arctrl/py/Json/Process/material_attribute_value.py +101 -0
  120. arctrl/py/Json/Process/material_type.py +53 -0
  121. arctrl/py/Json/Process/process.py +296 -0
  122. arctrl/py/Json/Process/process_input.py +83 -0
  123. arctrl/py/Json/Process/process_output.py +67 -0
  124. arctrl/py/Json/Process/process_parameter_value.py +81 -0
  125. arctrl/py/Json/Process/protocol.py +354 -0
  126. arctrl/py/Json/Process/protocol_parameter.py +91 -0
  127. arctrl/py/Json/Process/sample.py +277 -0
  128. arctrl/py/Json/Process/source.py +214 -0
  129. arctrl/py/Json/Process/study_materials.py +52 -0
  130. arctrl/py/Json/Process/value.py +56 -0
  131. arctrl/py/Json/ROCrate/__init__.py +0 -0
  132. arctrl/py/Json/ROCrate/ldcontext.py +143 -0
  133. arctrl/py/Json/ROCrate/ldgraph.py +117 -0
  134. arctrl/py/Json/ROCrate/ldnode.py +304 -0
  135. arctrl/py/Json/ROCrate/ldref.py +44 -0
  136. arctrl/py/Json/ROCrate/ldvalue.py +102 -0
  137. arctrl/py/Json/Table/__init__.py +0 -0
  138. arctrl/py/Json/Table/arc_table.py +375 -0
  139. arctrl/py/Json/Table/cell_table.py +83 -0
  140. arctrl/py/Json/Table/composite_cell.py +136 -0
  141. arctrl/py/Json/Table/composite_header.py +67 -0
  142. arctrl/py/Json/Table/iotype.py +24 -0
  143. arctrl/py/Json/Table/oatable.py +82 -0
  144. arctrl/py/Json/Table/templates.py +281 -0
  145. arctrl/py/Json/__init__.py +0 -0
  146. arctrl/py/Json/assay.py +600 -0
  147. arctrl/py/Json/comment.py +206 -0
  148. arctrl/py/Json/context/rocrate/__init__.py +0 -0
  149. arctrl/py/Json/context/rocrate/isa_assay_context.py +101 -0
  150. arctrl/py/Json/context/rocrate/isa_comment_context.py +60 -0
  151. arctrl/py/Json/context/rocrate/isa_component_context.py +77 -0
  152. arctrl/py/Json/context/rocrate/isa_data_context.py +74 -0
  153. arctrl/py/Json/context/rocrate/isa_factor_context.py +74 -0
  154. arctrl/py/Json/context/rocrate/isa_factor_value_context.py +84 -0
  155. arctrl/py/Json/context/rocrate/isa_investigation_context.py +110 -0
  156. arctrl/py/Json/context/rocrate/isa_material_attribute_context.py +64 -0
  157. arctrl/py/Json/context/rocrate/isa_material_attribute_value_context.py +80 -0
  158. arctrl/py/Json/context/rocrate/isa_material_context.py +71 -0
  159. arctrl/py/Json/context/rocrate/isa_ontology_annotation_context.py +68 -0
  160. arctrl/py/Json/context/rocrate/isa_ontology_source_reference_context.py +75 -0
  161. arctrl/py/Json/context/rocrate/isa_organization_context.py +55 -0
  162. arctrl/py/Json/context/rocrate/isa_person_context.py +131 -0
  163. arctrl/py/Json/context/rocrate/isa_process_context.py +94 -0
  164. arctrl/py/Json/context/rocrate/isa_process_parameter_value_context.py +80 -0
  165. arctrl/py/Json/context/rocrate/isa_protocol_context.py +97 -0
  166. arctrl/py/Json/context/rocrate/isa_protocol_parameter_context.py +64 -0
  167. arctrl/py/Json/context/rocrate/isa_publication_context.py +78 -0
  168. arctrl/py/Json/context/rocrate/isa_sample_context.py +65 -0
  169. arctrl/py/Json/context/rocrate/isa_source_context.py +66 -0
  170. arctrl/py/Json/context/rocrate/isa_study_context.py +125 -0
  171. arctrl/py/Json/context/rocrate/property_value_context.py +73 -0
  172. arctrl/py/Json/context/rocrate/rocrate_context.py +81 -0
  173. arctrl/py/Json/converter_options.py +23 -0
  174. arctrl/py/Json/data.py +356 -0
  175. arctrl/py/Json/data_file.py +63 -0
  176. arctrl/py/Json/decode.py +271 -0
  177. arctrl/py/Json/encode.py +140 -0
  178. arctrl/py/Json/idtable.py +44 -0
  179. arctrl/py/Json/investigation.py +695 -0
  180. arctrl/py/Json/ontology_annotation.py +404 -0
  181. arctrl/py/Json/ontology_source_reference.py +255 -0
  182. arctrl/py/Json/person.py +658 -0
  183. arctrl/py/Json/property_value.py +359 -0
  184. arctrl/py/Json/publication.py +279 -0
  185. arctrl/py/Json/run.py +275 -0
  186. arctrl/py/Json/string_table.py +87 -0
  187. arctrl/py/Json/study.py +793 -0
  188. arctrl/py/Json/workflow.py +307 -0
  189. arctrl/py/JsonIO/Process/__init__.py +0 -0
  190. arctrl/py/JsonIO/Process/component.py +60 -0
  191. arctrl/py/JsonIO/Process/factor.py +36 -0
  192. arctrl/py/JsonIO/Process/factor_value.py +38 -0
  193. arctrl/py/JsonIO/Process/material.py +60 -0
  194. arctrl/py/JsonIO/Process/material_attribute.py +38 -0
  195. arctrl/py/JsonIO/Process/material_attribute_value.py +60 -0
  196. arctrl/py/JsonIO/Process/material_type.py +36 -0
  197. arctrl/py/JsonIO/Process/process.py +60 -0
  198. arctrl/py/JsonIO/Process/process_input.py +38 -0
  199. arctrl/py/JsonIO/Process/process_output.py +60 -0
  200. arctrl/py/JsonIO/Process/process_parameter_value.py +60 -0
  201. arctrl/py/JsonIO/Process/process_sequence.py +71 -0
  202. arctrl/py/JsonIO/Process/protocol.py +60 -0
  203. arctrl/py/JsonIO/Process/protocol_parameter.py +36 -0
  204. arctrl/py/JsonIO/Process/sample.py +60 -0
  205. arctrl/py/JsonIO/Process/source.py +60 -0
  206. arctrl/py/JsonIO/Process/study_materials.py +52 -0
  207. arctrl/py/JsonIO/Process/value.py +32 -0
  208. arctrl/py/JsonIO/Table/__init__.py +0 -0
  209. arctrl/py/JsonIO/Table/arc_table.py +103 -0
  210. arctrl/py/JsonIO/Table/composite_cell.py +36 -0
  211. arctrl/py/JsonIO/Table/composite_header.py +36 -0
  212. arctrl/py/JsonIO/Table/compression.py +67 -0
  213. arctrl/py/JsonIO/Table/iotype.py +36 -0
  214. arctrl/py/JsonIO/Table/templates.py +113 -0
  215. arctrl/py/JsonIO/__init__.py +0 -0
  216. arctrl/py/JsonIO/assay.py +113 -0
  217. arctrl/py/JsonIO/comment.py +80 -0
  218. arctrl/py/JsonIO/data.py +60 -0
  219. arctrl/py/JsonIO/data_file.py +58 -0
  220. arctrl/py/JsonIO/datamap.py +36 -0
  221. arctrl/py/JsonIO/decode.py +9 -0
  222. arctrl/py/JsonIO/encode.py +1 -0
  223. arctrl/py/JsonIO/investigation.py +91 -0
  224. arctrl/py/JsonIO/ldobject.py +106 -0
  225. arctrl/py/JsonIO/ontology_annotation.py +80 -0
  226. arctrl/py/JsonIO/ontology_source_reference.py +80 -0
  227. arctrl/py/JsonIO/person.py +82 -0
  228. arctrl/py/JsonIO/publication.py +82 -0
  229. arctrl/py/JsonIO/run.py +68 -0
  230. arctrl/py/JsonIO/study.py +114 -0
  231. arctrl/py/JsonIO/workflow.py +68 -0
  232. arctrl/py/ROCrate/ISAProfile/__init__.py +0 -0
  233. arctrl/py/ROCrate/ISAProfile/assay.py +70 -0
  234. arctrl/py/ROCrate/ISAProfile/data.py +65 -0
  235. arctrl/py/ROCrate/ISAProfile/dataset.py +24 -0
  236. arctrl/py/ROCrate/ISAProfile/investigation.py +73 -0
  237. arctrl/py/ROCrate/ISAProfile/lab_process.py +162 -0
  238. arctrl/py/ROCrate/ISAProfile/lab_protocol.py +37 -0
  239. arctrl/py/ROCrate/ISAProfile/person.py +72 -0
  240. arctrl/py/ROCrate/ISAProfile/property_value.py +98 -0
  241. arctrl/py/ROCrate/ISAProfile/sample.py +64 -0
  242. arctrl/py/ROCrate/ISAProfile/scholarly_article.py +98 -0
  243. arctrl/py/ROCrate/ISAProfile/study.py +74 -0
  244. arctrl/py/ROCrate/LDTypes/__init__.py +0 -0
  245. arctrl/py/ROCrate/LDTypes/comment.py +131 -0
  246. arctrl/py/ROCrate/LDTypes/computational_workflow.py +455 -0
  247. arctrl/py/ROCrate/LDTypes/computer_language.py +269 -0
  248. arctrl/py/ROCrate/LDTypes/create_action.py +303 -0
  249. arctrl/py/ROCrate/LDTypes/creative_work.py +566 -0
  250. arctrl/py/ROCrate/LDTypes/dataset.py +943 -0
  251. arctrl/py/ROCrate/LDTypes/defined_term.py +131 -0
  252. arctrl/py/ROCrate/LDTypes/file.py +281 -0
  253. arctrl/py/ROCrate/LDTypes/formal_parameter.py +431 -0
  254. arctrl/py/ROCrate/LDTypes/lab_process.py +352 -0
  255. arctrl/py/ROCrate/LDTypes/lab_protocol.py +395 -0
  256. arctrl/py/ROCrate/LDTypes/organization.py +83 -0
  257. arctrl/py/ROCrate/LDTypes/person.py +484 -0
  258. arctrl/py/ROCrate/LDTypes/postal_address.py +195 -0
  259. arctrl/py/ROCrate/LDTypes/property_value.py +952 -0
  260. arctrl/py/ROCrate/LDTypes/sample.py +202 -0
  261. arctrl/py/ROCrate/LDTypes/scholarly_article.py +229 -0
  262. arctrl/py/ROCrate/LDTypes/software_source_code.py +310 -0
  263. arctrl/py/ROCrate/LDTypes/workflow_invocation.py +48 -0
  264. arctrl/py/ROCrate/LDTypes/workflow_protocol.py +52 -0
  265. arctrl/py/ROCrate/__init__.py +0 -0
  266. arctrl/py/ROCrate/arc_rocrate_metadata.py +39 -0
  267. arctrl/py/ROCrate/dyn_obj_extensions.py +1 -0
  268. arctrl/py/ROCrate/helper.py +8 -0
  269. arctrl/py/ROCrate/ldcontext.py +406 -0
  270. arctrl/py/ROCrate/ldobject.py +1247 -0
  271. arctrl/py/ROCrate/rocrate_context.py +51 -0
  272. arctrl/py/Spreadsheet/AnnotationTable/__init__.py +0 -0
  273. arctrl/py/Spreadsheet/AnnotationTable/arc_table.py +203 -0
  274. arctrl/py/Spreadsheet/AnnotationTable/composite_cell.py +78 -0
  275. arctrl/py/Spreadsheet/AnnotationTable/composite_column.py +305 -0
  276. arctrl/py/Spreadsheet/AnnotationTable/composite_header.py +623 -0
  277. arctrl/py/Spreadsheet/DatamapTable/__init__.py +0 -0
  278. arctrl/py/Spreadsheet/DatamapTable/datamap_column.py +114 -0
  279. arctrl/py/Spreadsheet/DatamapTable/datamap_header.py +621 -0
  280. arctrl/py/Spreadsheet/DatamapTable/datamap_table.py +118 -0
  281. arctrl/py/Spreadsheet/Metadata/__init__.py +0 -0
  282. arctrl/py/Spreadsheet/Metadata/assays.py +125 -0
  283. arctrl/py/Spreadsheet/Metadata/comment.py +77 -0
  284. arctrl/py/Spreadsheet/Metadata/contacts.py +134 -0
  285. arctrl/py/Spreadsheet/Metadata/conversions.py +190 -0
  286. arctrl/py/Spreadsheet/Metadata/design_descriptors.py +34 -0
  287. arctrl/py/Spreadsheet/Metadata/factors.py +107 -0
  288. arctrl/py/Spreadsheet/Metadata/ontology_annotation.py +88 -0
  289. arctrl/py/Spreadsheet/Metadata/ontology_source_reference.py +96 -0
  290. arctrl/py/Spreadsheet/Metadata/protocols.py +146 -0
  291. arctrl/py/Spreadsheet/Metadata/publication.py +122 -0
  292. arctrl/py/Spreadsheet/Metadata/run.py +122 -0
  293. arctrl/py/Spreadsheet/Metadata/sparse_table.py +499 -0
  294. arctrl/py/Spreadsheet/Metadata/study.py +312 -0
  295. arctrl/py/Spreadsheet/Metadata/workflow.py +159 -0
  296. arctrl/py/Spreadsheet/__init__.py +0 -0
  297. arctrl/py/Spreadsheet/arc_assay.py +233 -0
  298. arctrl/py/Spreadsheet/arc_investigation.py +435 -0
  299. arctrl/py/Spreadsheet/arc_run.py +190 -0
  300. arctrl/py/Spreadsheet/arc_study.py +144 -0
  301. arctrl/py/Spreadsheet/arc_workflow.py +177 -0
  302. arctrl/py/Spreadsheet/assembly_info.py +1 -0
  303. arctrl/py/Spreadsheet/collection_aux.py +167 -0
  304. arctrl/py/Spreadsheet/datamap.py +43 -0
  305. arctrl/py/Spreadsheet/template.py +460 -0
  306. arctrl/py/ValidationPackages/__init__.py +0 -0
  307. arctrl/py/ValidationPackages/validation_package.py +82 -0
  308. arctrl/py/ValidationPackages/validation_packages_config.py +132 -0
  309. arctrl/py/WebRequest/__init__.py +0 -0
  310. arctrl/py/WebRequest/web_request.py +9 -0
  311. arctrl/py/WebRequest/web_request_py.py +135 -0
  312. arctrl/py/WorkflowGraph/__init__.py +0 -0
  313. arctrl/py/WorkflowGraph/adapters.py +141 -0
  314. arctrl/py/WorkflowGraph/build_options.py +45 -0
  315. arctrl/py/WorkflowGraph/builder.py +720 -0
  316. arctrl/py/WorkflowGraph/graph_types.py +260 -0
  317. arctrl/py/WorkflowGraph/query_helpers.py +76 -0
  318. arctrl/py/WorkflowGraph/reference_parsing.py +59 -0
  319. arctrl/py/WorkflowGraph/visualization_siren.py +574 -0
  320. arctrl/py/WorkflowGraph/workflow_graph.py +119 -0
  321. arctrl/py/Yaml/__init__.py +0 -0
  322. arctrl/py/Yaml/decode.py +1 -0
  323. arctrl/py/Yaml/encode.py +10 -0
  324. arctrl/py/Yaml/validation_package.py +77 -0
  325. arctrl/py/Yaml/validation_packages_config.py +86 -0
  326. arctrl/py/__init__.py +0 -0
  327. arctrl/py/arc.py +1891 -0
  328. arctrl/py/column_index.py +280 -0
  329. arctrl/py/conversion.py +142 -0
  330. arctrl/py/cross_async.py +76 -0
  331. arctrl/py/cwlrun_resolver.py +228 -0
  332. arctrl/py/fable_modules/dynamic_obj/__init__.py +0 -0
  333. arctrl/py/fable_modules/dynamic_obj/dyn_obj.py +136 -0
  334. arctrl/py/fable_modules/dynamic_obj/dynamic_obj.py +415 -0
  335. arctrl/py/fable_modules/dynamic_obj/fable_js.py +1 -0
  336. arctrl/py/fable_modules/dynamic_obj/fable_py.py +288 -0
  337. arctrl/py/fable_modules/dynamic_obj/hash_codes.py +82 -0
  338. arctrl/py/fable_modules/dynamic_obj/property_helper.py +25 -0
  339. arctrl/py/fable_modules/dynamic_obj/reflection_utils.py +87 -0
  340. arctrl/py/fable_modules/fable_library/__init__.py +0 -0
  341. arctrl/py/fable_modules/fable_library/array_.py +1528 -0
  342. arctrl/py/fable_modules/fable_library/async_.py +377 -0
  343. arctrl/py/fable_modules/fable_library/async_builder.py +379 -0
  344. arctrl/py/fable_modules/fable_library/big_int.py +330 -0
  345. arctrl/py/fable_modules/fable_library/bit_converter.py +131 -0
  346. arctrl/py/fable_modules/fable_library/boolean.py +26 -0
  347. arctrl/py/fable_modules/fable_library/char.py +237 -0
  348. arctrl/py/fable_modules/fable_library/choice.py +212 -0
  349. arctrl/py/fable_modules/fable_library/date.py +779 -0
  350. arctrl/py/fable_modules/fable_library/date_offset.py +79 -0
  351. arctrl/py/fable_modules/fable_library/decimal_.py +190 -0
  352. arctrl/py/fable_modules/fable_library/diagnostics.py +54 -0
  353. arctrl/py/fable_modules/fable_library/double.py +87 -0
  354. arctrl/py/fable_modules/fable_library/encoding.py +41 -0
  355. arctrl/py/fable_modules/fable_library/event.py +206 -0
  356. arctrl/py/fable_modules/fable_library/file.py +107 -0
  357. arctrl/py/fable_modules/fable_library/fsharp_collections.py +52 -0
  358. arctrl/py/fable_modules/fable_library/fsharp_core.py +123 -0
  359. arctrl/py/fable_modules/fable_library/global_.py +63 -0
  360. arctrl/py/fable_modules/fable_library/guid.py +41 -0
  361. arctrl/py/fable_modules/fable_library/int32.py +73 -0
  362. arctrl/py/fable_modules/fable_library/list.py +1788 -0
  363. arctrl/py/fable_modules/fable_library/long.py +240 -0
  364. arctrl/py/fable_modules/fable_library/mailbox_processor.py +179 -0
  365. arctrl/py/fable_modules/fable_library/map.py +1854 -0
  366. arctrl/py/fable_modules/fable_library/map_util.py +148 -0
  367. arctrl/py/fable_modules/fable_library/mutable_map.py +397 -0
  368. arctrl/py/fable_modules/fable_library/mutable_set.py +279 -0
  369. arctrl/py/fable_modules/fable_library/native.py +45 -0
  370. arctrl/py/fable_modules/fable_library/numeric.py +46 -0
  371. arctrl/py/fable_modules/fable_library/observable.py +222 -0
  372. arctrl/py/fable_modules/fable_library/option.py +128 -0
  373. arctrl/py/fable_modules/fable_library/path.py +62 -0
  374. arctrl/py/fable_modules/fable_library/range.py +117 -0
  375. arctrl/py/fable_modules/fable_library/reflection.py +463 -0
  376. arctrl/py/fable_modules/fable_library/reg_exp.py +137 -0
  377. arctrl/py/fable_modules/fable_library/resize_array.py +31 -0
  378. arctrl/py/fable_modules/fable_library/result.py +212 -0
  379. arctrl/py/fable_modules/fable_library/seq.py +1979 -0
  380. arctrl/py/fable_modules/fable_library/seq2.py +221 -0
  381. arctrl/py/fable_modules/fable_library/set.py +2414 -0
  382. arctrl/py/fable_modules/fable_library/singleton_local_time_zone.py +36 -0
  383. arctrl/py/fable_modules/fable_library/string_.py +573 -0
  384. arctrl/py/fable_modules/fable_library/system_collections_generic.py +462 -0
  385. arctrl/py/fable_modules/fable_library/system_text.py +237 -0
  386. arctrl/py/fable_modules/fable_library/task.py +116 -0
  387. arctrl/py/fable_modules/fable_library/task_builder.py +122 -0
  388. arctrl/py/fable_modules/fable_library/thread.py +5 -0
  389. arctrl/py/fable_modules/fable_library/time_span.py +283 -0
  390. arctrl/py/fable_modules/fable_library/timer.py +24 -0
  391. arctrl/py/fable_modules/fable_library/types.py +401 -0
  392. arctrl/py/fable_modules/fable_library/uri.py +109 -0
  393. arctrl/py/fable_modules/fable_library/util.py +2735 -0
  394. arctrl/py/fable_modules/fable_openpyxl/__init__.py +0 -0
  395. arctrl/py/fable_modules/fable_openpyxl/openpyxl.py +362 -0
  396. arctrl/py/fable_modules/fable_python/cognite-sdk/__init__.py +0 -0
  397. arctrl/py/fable_modules/fable_python/cognite-sdk/cognite_sdk.py +22 -0
  398. arctrl/py/fable_modules/fable_python/flask/__init__.py +0 -0
  399. arctrl/py/fable_modules/fable_python/flask/flask.py +34 -0
  400. arctrl/py/fable_modules/fable_python/jupyter/__init__.py +0 -0
  401. arctrl/py/fable_modules/fable_python/jupyter/ipy_widgets.py +47 -0
  402. arctrl/py/fable_modules/fable_python/jupyter/ipython.py +13 -0
  403. arctrl/py/fable_modules/fable_python/stdlib/__init__.py +0 -0
  404. arctrl/py/fable_modules/fable_python/stdlib/ast.py +1 -0
  405. arctrl/py/fable_modules/fable_python/stdlib/asyncio/__init__.py +0 -0
  406. arctrl/py/fable_modules/fable_python/stdlib/asyncio/events.py +17 -0
  407. arctrl/py/fable_modules/fable_python/stdlib/asyncio/futures.py +52 -0
  408. arctrl/py/fable_modules/fable_python/stdlib/asyncio/tasks.py +38 -0
  409. arctrl/py/fable_modules/fable_python/stdlib/base64_.py +1 -0
  410. arctrl/py/fable_modules/fable_python/stdlib/builtins_.py +38 -0
  411. arctrl/py/fable_modules/fable_python/stdlib/html.py +1 -0
  412. arctrl/py/fable_modules/fable_python/stdlib/json.py +1 -0
  413. arctrl/py/fable_modules/fable_python/stdlib/math_.py +1 -0
  414. arctrl/py/fable_modules/fable_python/stdlib/os_.py +1 -0
  415. arctrl/py/fable_modules/fable_python/stdlib/queue_.py +1 -0
  416. arctrl/py/fable_modules/fable_python/stdlib/string_.py +1 -0
  417. arctrl/py/fable_modules/fable_python/stdlib/sys_.py +30 -0
  418. arctrl/py/fable_modules/fable_python/stdlib/time_.py +1 -0
  419. arctrl/py/fable_modules/fable_python/stdlib/tk_inter.py +1 -0
  420. arctrl/py/fable_modules/fs_spreadsheet/Cells/__init__.py +0 -0
  421. arctrl/py/fable_modules/fs_spreadsheet/Cells/fs_cell.py +340 -0
  422. arctrl/py/fable_modules/fs_spreadsheet/Cells/fs_cells_collection.py +466 -0
  423. arctrl/py/fable_modules/fs_spreadsheet/DSL/__init__.py +0 -0
  424. arctrl/py/fable_modules/fs_spreadsheet/DSL/cell_builder.py +214 -0
  425. arctrl/py/fable_modules/fs_spreadsheet/DSL/column_builder.py +139 -0
  426. arctrl/py/fable_modules/fs_spreadsheet/DSL/dsl.py +50 -0
  427. arctrl/py/fable_modules/fs_spreadsheet/DSL/expression.py +65 -0
  428. arctrl/py/fable_modules/fs_spreadsheet/DSL/operators.py +9 -0
  429. arctrl/py/fable_modules/fs_spreadsheet/DSL/row_builder.py +139 -0
  430. arctrl/py/fable_modules/fs_spreadsheet/DSL/sheet_builder.py +118 -0
  431. arctrl/py/fable_modules/fs_spreadsheet/DSL/table_builder.py +122 -0
  432. arctrl/py/fable_modules/fs_spreadsheet/DSL/transform.py +463 -0
  433. arctrl/py/fable_modules/fs_spreadsheet/DSL/types.py +314 -0
  434. arctrl/py/fable_modules/fs_spreadsheet/DSL/workbook_builder.py +106 -0
  435. arctrl/py/fable_modules/fs_spreadsheet/Json/__init__.py +0 -0
  436. arctrl/py/fable_modules/fs_spreadsheet/Json/cell.py +103 -0
  437. arctrl/py/fable_modules/fs_spreadsheet/Json/column.py +70 -0
  438. arctrl/py/fable_modules/fs_spreadsheet/Json/row.py +70 -0
  439. arctrl/py/fable_modules/fs_spreadsheet/Json/table.py +54 -0
  440. arctrl/py/fable_modules/fs_spreadsheet/Json/value.py +93 -0
  441. arctrl/py/fable_modules/fs_spreadsheet/Json/workbook.py +71 -0
  442. arctrl/py/fable_modules/fs_spreadsheet/Json/worksheet.py +216 -0
  443. arctrl/py/fable_modules/fs_spreadsheet/Ranges/__init__.py +0 -0
  444. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range.py +43 -0
  445. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_address.py +190 -0
  446. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_base.py +92 -0
  447. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_column.py +77 -0
  448. arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_row.py +48 -0
  449. arctrl/py/fable_modules/fs_spreadsheet/Tables/__init__.py +0 -0
  450. arctrl/py/fable_modules/fs_spreadsheet/Tables/fs_table.py +461 -0
  451. arctrl/py/fable_modules/fs_spreadsheet/Tables/fs_table_field.py +117 -0
  452. arctrl/py/fable_modules/fs_spreadsheet/Tables/fs_table_row.py +23 -0
  453. arctrl/py/fable_modules/fs_spreadsheet/__init__.py +0 -0
  454. arctrl/py/fable_modules/fs_spreadsheet/fs_address.py +236 -0
  455. arctrl/py/fable_modules/fs_spreadsheet/fs_column.py +172 -0
  456. arctrl/py/fable_modules/fs_spreadsheet/fs_row.py +183 -0
  457. arctrl/py/fable_modules/fs_spreadsheet/fs_workbook.py +192 -0
  458. arctrl/py/fable_modules/fs_spreadsheet/fs_worksheet.py +610 -0
  459. arctrl/py/fable_modules/fs_spreadsheet/hash_codes.py +60 -0
  460. arctrl/py/fable_modules/fs_spreadsheet/sheet_builder.py +329 -0
  461. arctrl/py/fable_modules/fs_spreadsheet_py/__init__.py +0 -0
  462. arctrl/py/fable_modules/fs_spreadsheet_py/cell.py +60 -0
  463. arctrl/py/fable_modules/fs_spreadsheet_py/cell_type.py +50 -0
  464. arctrl/py/fable_modules/fs_spreadsheet_py/fs_extension.py +60 -0
  465. arctrl/py/fable_modules/fs_spreadsheet_py/json.py +47 -0
  466. arctrl/py/fable_modules/fs_spreadsheet_py/table.py +54 -0
  467. arctrl/py/fable_modules/fs_spreadsheet_py/workbook.py +41 -0
  468. arctrl/py/fable_modules/fs_spreadsheet_py/worksheet.py +52 -0
  469. arctrl/py/fable_modules/fs_spreadsheet_py/xlsx.py +37 -0
  470. arctrl/py/fable_modules/siren/__init__.py +0 -0
  471. arctrl/py/fable_modules/siren/config.py +1038 -0
  472. arctrl/py/fable_modules/siren/formatting.py +1121 -0
  473. arctrl/py/fable_modules/siren/siren.py +1941 -0
  474. arctrl/py/fable_modules/siren/siren_types.py +1229 -0
  475. arctrl/py/fable_modules/siren/theme_variables.py +517 -0
  476. arctrl/py/fable_modules/siren/util.py +37 -0
  477. arctrl/py/fable_modules/siren/yaml.py +101 -0
  478. arctrl/py/fable_modules/thoth_json_core/__init__.py +0 -0
  479. arctrl/py/fable_modules/thoth_json_core/decode.py +1614 -0
  480. arctrl/py/fable_modules/thoth_json_core/encode.py +305 -0
  481. arctrl/py/fable_modules/thoth_json_core/types.py +181 -0
  482. arctrl/py/fable_modules/thoth_json_python/__init__.py +0 -0
  483. arctrl/py/fable_modules/thoth_json_python/decode.py +112 -0
  484. arctrl/py/fable_modules/thoth_json_python/encode.py +72 -0
  485. arctrl/py/fable_modules/thoth_json_python/python.py +1 -0
  486. arctrl/py/fable_modules/yamlicious/Interop/__init__.py +0 -0
  487. arctrl/py/fable_modules/yamlicious/Interop/js_interop.py +1 -0
  488. arctrl/py/fable_modules/yamlicious/Interop/py_interop.py +7 -0
  489. arctrl/py/fable_modules/yamlicious/__init__.py +0 -0
  490. arctrl/py/fable_modules/yamlicious/decode.py +1784 -0
  491. arctrl/py/fable_modules/yamlicious/encode.py +84 -0
  492. arctrl/py/fable_modules/yamlicious/flow_to_block.py +994 -0
  493. arctrl/py/fable_modules/yamlicious/library.py +10 -0
  494. arctrl/py/fable_modules/yamlicious/persil.py +57 -0
  495. arctrl/py/fable_modules/yamlicious/preprocessing.py +99 -0
  496. arctrl/py/fable_modules/yamlicious/reader.py +739 -0
  497. arctrl/py/fable_modules/yamlicious/regex.py +29 -0
  498. arctrl/py/fable_modules/yamlicious/regex_active_patterns.py +265 -0
  499. arctrl/py/fable_modules/yamlicious/writer.py +175 -0
  500. arctrl/py/fable_modules/yamlicious/yamlicious_types.py +128 -0
  501. arctrl/py/json.py +389 -0
  502. arctrl/py/license.py +169 -0
  503. arctrl/py/rocrate_io.py +242 -0
  504. arctrl/py/template_web.py +23 -0
  505. arctrl/py/xlsx.py +212 -0
  506. arctrl/py/yaml.py +79 -0
  507. arctrl/rocrate.py +21 -0
  508. arctrl-3.0.0.dist-info/METADATA +157 -0
  509. arctrl-3.0.0.dist-info/RECORD +511 -0
  510. arctrl-3.0.0.dist-info/WHEEL +4 -0
  511. arctrl-3.0.0.dist-info/licenses/LICENSE +21 -0
arctrl/py/Json/run.py ADDED
@@ -0,0 +1,275 @@
1
+ from __future__ import annotations
2
+ from typing import (Any, TypeVar)
3
+ from ..fable_modules.fable_library.list import (choose, of_array, FSharpList)
4
+ from ..fable_modules.fable_library.option import map
5
+ from ..fable_modules.fable_library.seq import map as map_1
6
+ from ..fable_modules.fable_library.types import Array
7
+ from ..fable_modules.fable_library.util import IEnumerable_1
8
+ from ..fable_modules.thoth_json_core.decode import (object, IRequiredGetter, string, IOptionalGetter, resize_array, IGetters)
9
+ from ..fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1, Decoder_1)
10
+ from ..Core.arc_types import ArcRun
11
+ from ..Core.comment import Comment
12
+ from ..Core.datamap import Datamap
13
+ from ..Core.ontology_annotation import OntologyAnnotation
14
+ from ..Core.person import Person
15
+ from ..Core.Table.arc_table import ArcTable
16
+ from ..Core.Table.composite_cell import CompositeCell
17
+ from .comment import (encoder as encoder_4, decoder as decoder_4)
18
+ from .Datamap.datamap import (encoder as encoder_1, decoder as decoder_2, encoder_compressed as encoder_compressed_1, decoder_compressed as decoder_compressed_2)
19
+ from .encode import (try_include, try_include_seq)
20
+ from .ontology_annotation import (OntologyAnnotation_encoder, OntologyAnnotation_decoder)
21
+ from .person import (encoder as encoder_3, decoder as decoder_3)
22
+ from .Table.arc_table import (encoder as encoder_2, decoder as decoder_1, encoder_compressed as encoder_compressed_2, decoder_compressed as decoder_compressed_1)
23
+
24
+ __A_ = TypeVar("__A_")
25
+
26
+ def encoder(run: ArcRun) -> IEncodable:
27
+ def chooser(tupled_arg: tuple[str, IEncodable | None], run: Any=run) -> tuple[str, IEncodable] | None:
28
+ def mapping(v_1: IEncodable, tupled_arg: Any=tupled_arg) -> tuple[str, IEncodable]:
29
+ return (tupled_arg[0], v_1)
30
+
31
+ return map(mapping, tupled_arg[1])
32
+
33
+ def _arrow3734(__unit: None=None, run: Any=run) -> IEncodable:
34
+ value: str = run.Identifier
35
+ class ObjectExpr3733(IEncodable):
36
+ def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
37
+ return helpers.encode_string(value)
38
+
39
+ return ObjectExpr3733()
40
+
41
+ def _arrow3736(value_1: str, run: Any=run) -> IEncodable:
42
+ class ObjectExpr3735(IEncodable):
43
+ def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
44
+ return helpers_1.encode_string(value_1)
45
+
46
+ return ObjectExpr3735()
47
+
48
+ def _arrow3740(value_3: str, run: Any=run) -> IEncodable:
49
+ class ObjectExpr3739(IEncodable):
50
+ def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
51
+ return helpers_2.encode_string(value_3)
52
+
53
+ return ObjectExpr3739()
54
+
55
+ def _arrow3741(oa: OntologyAnnotation, run: Any=run) -> IEncodable:
56
+ return OntologyAnnotation_encoder(oa)
57
+
58
+ def _arrow3744(oa_1: OntologyAnnotation, run: Any=run) -> IEncodable:
59
+ return OntologyAnnotation_encoder(oa_1)
60
+
61
+ def _arrow3745(oa_2: OntologyAnnotation, run: Any=run) -> IEncodable:
62
+ return OntologyAnnotation_encoder(oa_2)
63
+
64
+ def _arrow3747(dm: Datamap, run: Any=run) -> IEncodable:
65
+ return encoder_1(dm)
66
+
67
+ def _arrow3751(value_5: str, run: Any=run) -> IEncodable:
68
+ class ObjectExpr3750(IEncodable):
69
+ def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
70
+ return helpers_3.encode_string(value_5)
71
+
72
+ return ObjectExpr3750()
73
+
74
+ def _arrow3753(table: ArcTable, run: Any=run) -> IEncodable:
75
+ return encoder_2(table)
76
+
77
+ def _arrow3754(person: Person, run: Any=run) -> IEncodable:
78
+ return encoder_3(person)
79
+
80
+ def _arrow3757(comment: Comment, run: Any=run) -> IEncodable:
81
+ return encoder_4(comment)
82
+
83
+ values: FSharpList[tuple[str, IEncodable]] = choose(chooser, of_array([("Identifier", _arrow3734()), try_include("Title", _arrow3736, run.Title), try_include("Description", _arrow3740, run.Description), try_include("MeasurementType", _arrow3741, run.MeasurementType), try_include("TechnologyType", _arrow3744, run.TechnologyType), try_include("TechnologyPlatform", _arrow3745, run.TechnologyPlatform), try_include("Datamap", _arrow3747, run.Datamap), try_include_seq("WorkflowIdentifiers", _arrow3751, run.WorkflowIdentifiers), try_include_seq("Tables", _arrow3753, run.Tables), try_include_seq("Performers", _arrow3754, run.Performers), try_include_seq("Comments", _arrow3757, run.Comments)]))
84
+ class ObjectExpr3762(IEncodable):
85
+ def Encode(self, helpers_4: IEncoderHelpers_1[Any], run: Any=run) -> Any:
86
+ def mapping_1(tupled_arg_1: tuple[str, IEncodable]) -> tuple[str, __A_]:
87
+ return (tupled_arg_1[0], tupled_arg_1[1].Encode(helpers_4))
88
+
89
+ arg: IEnumerable_1[tuple[str, __A_]] = map_1(mapping_1, values)
90
+ return helpers_4.encode_object(arg)
91
+
92
+ return ObjectExpr3762()
93
+
94
+
95
+ def _arrow3784(get: IGetters) -> ArcRun:
96
+ def _arrow3769(__unit: None=None) -> str:
97
+ object_arg: IRequiredGetter = get.Required
98
+ return object_arg.Field("Identifier", string)
99
+
100
+ def _arrow3770(__unit: None=None) -> str | None:
101
+ object_arg_1: IOptionalGetter = get.Optional
102
+ return object_arg_1.Field("Title", string)
103
+
104
+ def _arrow3771(__unit: None=None) -> str | None:
105
+ object_arg_2: IOptionalGetter = get.Optional
106
+ return object_arg_2.Field("Description", string)
107
+
108
+ def _arrow3772(__unit: None=None) -> OntologyAnnotation | None:
109
+ object_arg_3: IOptionalGetter = get.Optional
110
+ return object_arg_3.Field("MeasurementType", OntologyAnnotation_decoder)
111
+
112
+ def _arrow3773(__unit: None=None) -> OntologyAnnotation | None:
113
+ object_arg_4: IOptionalGetter = get.Optional
114
+ return object_arg_4.Field("TechnologyType", OntologyAnnotation_decoder)
115
+
116
+ def _arrow3775(__unit: None=None) -> OntologyAnnotation | None:
117
+ object_arg_5: IOptionalGetter = get.Optional
118
+ return object_arg_5.Field("TechnologyPlatform", OntologyAnnotation_decoder)
119
+
120
+ def _arrow3776(__unit: None=None) -> Array[str] | None:
121
+ arg_13: Decoder_1[Array[str]] = resize_array(string)
122
+ object_arg_6: IOptionalGetter = get.Optional
123
+ return object_arg_6.Field("WorkflowIdentifiers", arg_13)
124
+
125
+ def _arrow3777(__unit: None=None) -> Array[ArcTable] | None:
126
+ arg_15: Decoder_1[Array[ArcTable]] = resize_array(decoder_1)
127
+ object_arg_7: IOptionalGetter = get.Optional
128
+ return object_arg_7.Field("Tables", arg_15)
129
+
130
+ def _arrow3778(__unit: None=None) -> Datamap | None:
131
+ object_arg_8: IOptionalGetter = get.Optional
132
+ return object_arg_8.Field("Datamap", decoder_2)
133
+
134
+ def _arrow3780(__unit: None=None) -> Array[Person] | None:
135
+ arg_19: Decoder_1[Array[Person]] = resize_array(decoder_3)
136
+ object_arg_9: IOptionalGetter = get.Optional
137
+ return object_arg_9.Field("Performers", arg_19)
138
+
139
+ def _arrow3783(__unit: None=None) -> Array[Comment] | None:
140
+ arg_21: Decoder_1[Array[Comment]] = resize_array(decoder_4)
141
+ object_arg_10: IOptionalGetter = get.Optional
142
+ return object_arg_10.Field("Comments", arg_21)
143
+
144
+ return ArcRun.create(_arrow3769(), _arrow3770(), _arrow3771(), _arrow3772(), _arrow3773(), _arrow3775(), _arrow3776(), _arrow3777(), _arrow3778(), _arrow3780(), None, None, _arrow3783())
145
+
146
+
147
+ decoder: Decoder_1[ArcRun] = object(_arrow3784)
148
+
149
+ def encoder_compressed(string_table: Any, oa_table: Any, cell_table: Any, run: ArcRun) -> IEncodable:
150
+ def chooser(tupled_arg: tuple[str, IEncodable | None], string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, run: Any=run) -> tuple[str, IEncodable] | None:
151
+ def mapping(v_1: IEncodable, tupled_arg: Any=tupled_arg) -> tuple[str, IEncodable]:
152
+ return (tupled_arg[0], v_1)
153
+
154
+ return map(mapping, tupled_arg[1])
155
+
156
+ def _arrow3793(__unit: None=None, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, run: Any=run) -> IEncodable:
157
+ value: str = run.Identifier
158
+ class ObjectExpr3792(IEncodable):
159
+ def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
160
+ return helpers.encode_string(value)
161
+
162
+ return ObjectExpr3792()
163
+
164
+ def _arrow3797(value_1: str, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, run: Any=run) -> IEncodable:
165
+ class ObjectExpr3796(IEncodable):
166
+ def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
167
+ return helpers_1.encode_string(value_1)
168
+
169
+ return ObjectExpr3796()
170
+
171
+ def _arrow3801(value_3: str, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, run: Any=run) -> IEncodable:
172
+ class ObjectExpr3800(IEncodable):
173
+ def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
174
+ return helpers_2.encode_string(value_3)
175
+
176
+ return ObjectExpr3800()
177
+
178
+ def _arrow3803(oa: OntologyAnnotation, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, run: Any=run) -> IEncodable:
179
+ return OntologyAnnotation_encoder(oa)
180
+
181
+ def _arrow3804(oa_1: OntologyAnnotation, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, run: Any=run) -> IEncodable:
182
+ return OntologyAnnotation_encoder(oa_1)
183
+
184
+ def _arrow3805(oa_2: OntologyAnnotation, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, run: Any=run) -> IEncodable:
185
+ return OntologyAnnotation_encoder(oa_2)
186
+
187
+ def _arrow3806(dm: Datamap, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, run: Any=run) -> IEncodable:
188
+ return encoder_compressed_1(string_table, oa_table, cell_table, dm)
189
+
190
+ def _arrow3810(value_5: str, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, run: Any=run) -> IEncodable:
191
+ class ObjectExpr3809(IEncodable):
192
+ def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
193
+ return helpers_3.encode_string(value_5)
194
+
195
+ return ObjectExpr3809()
196
+
197
+ def _arrow3813(table: ArcTable, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, run: Any=run) -> IEncodable:
198
+ return encoder_compressed_2(string_table, oa_table, cell_table, table)
199
+
200
+ def _arrow3814(person: Person, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, run: Any=run) -> IEncodable:
201
+ return encoder_3(person)
202
+
203
+ def _arrow3815(comment: Comment, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, run: Any=run) -> IEncodable:
204
+ return encoder_4(comment)
205
+
206
+ values: FSharpList[tuple[str, IEncodable]] = choose(chooser, of_array([("Identifier", _arrow3793()), try_include("Title", _arrow3797, run.Title), try_include("Description", _arrow3801, run.Description), try_include("MeasurementType", _arrow3803, run.MeasurementType), try_include("TechnologyType", _arrow3804, run.TechnologyType), try_include("TechnologyPlatform", _arrow3805, run.TechnologyPlatform), try_include("Datamap", _arrow3806, run.Datamap), try_include_seq("WorkflowIdentifiers", _arrow3810, run.WorkflowIdentifiers), try_include_seq("Tables", _arrow3813, run.Tables), try_include_seq("Performers", _arrow3814, run.Performers), try_include_seq("Comments", _arrow3815, run.Comments)]))
207
+ class ObjectExpr3820(IEncodable):
208
+ def Encode(self, helpers_4: IEncoderHelpers_1[Any], string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, run: Any=run) -> Any:
209
+ def mapping_1(tupled_arg_1: tuple[str, IEncodable]) -> tuple[str, __A_]:
210
+ return (tupled_arg_1[0], tupled_arg_1[1].Encode(helpers_4))
211
+
212
+ arg: IEnumerable_1[tuple[str, __A_]] = map_1(mapping_1, values)
213
+ return helpers_4.encode_object(arg)
214
+
215
+ return ObjectExpr3820()
216
+
217
+
218
+ def decoder_compressed(string_table: Array[str], oa_table: Array[OntologyAnnotation], cell_table: Array[CompositeCell]) -> Decoder_1[ArcRun]:
219
+ def _arrow3846(get: IGetters, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table) -> ArcRun:
220
+ def _arrow3829(__unit: None=None) -> str:
221
+ object_arg: IRequiredGetter = get.Required
222
+ return object_arg.Field("Identifier", string)
223
+
224
+ def _arrow3831(__unit: None=None) -> str | None:
225
+ object_arg_1: IOptionalGetter = get.Optional
226
+ return object_arg_1.Field("Title", string)
227
+
228
+ def _arrow3832(__unit: None=None) -> str | None:
229
+ object_arg_2: IOptionalGetter = get.Optional
230
+ return object_arg_2.Field("Description", string)
231
+
232
+ def _arrow3833(__unit: None=None) -> OntologyAnnotation | None:
233
+ object_arg_3: IOptionalGetter = get.Optional
234
+ return object_arg_3.Field("MeasurementType", OntologyAnnotation_decoder)
235
+
236
+ def _arrow3837(__unit: None=None) -> OntologyAnnotation | None:
237
+ object_arg_4: IOptionalGetter = get.Optional
238
+ return object_arg_4.Field("TechnologyType", OntologyAnnotation_decoder)
239
+
240
+ def _arrow3838(__unit: None=None) -> OntologyAnnotation | None:
241
+ object_arg_5: IOptionalGetter = get.Optional
242
+ return object_arg_5.Field("TechnologyPlatform", OntologyAnnotation_decoder)
243
+
244
+ def _arrow3840(__unit: None=None) -> Array[str] | None:
245
+ arg_13: Decoder_1[Array[str]] = resize_array(string)
246
+ object_arg_6: IOptionalGetter = get.Optional
247
+ return object_arg_6.Field("WorkflowIdentifiers", arg_13)
248
+
249
+ def _arrow3841(__unit: None=None) -> Array[ArcTable] | None:
250
+ arg_15: Decoder_1[Array[ArcTable]] = resize_array(decoder_compressed_1(string_table, oa_table, cell_table))
251
+ object_arg_7: IOptionalGetter = get.Optional
252
+ return object_arg_7.Field("Tables", arg_15)
253
+
254
+ def _arrow3842(__unit: None=None) -> Datamap | None:
255
+ arg_17: Decoder_1[Datamap] = decoder_compressed_2(string_table, oa_table, cell_table)
256
+ object_arg_8: IOptionalGetter = get.Optional
257
+ return object_arg_8.Field("Datamap", arg_17)
258
+
259
+ def _arrow3843(__unit: None=None) -> Array[Person] | None:
260
+ arg_19: Decoder_1[Array[Person]] = resize_array(decoder_3)
261
+ object_arg_9: IOptionalGetter = get.Optional
262
+ return object_arg_9.Field("Performers", arg_19)
263
+
264
+ def _arrow3844(__unit: None=None) -> Array[Comment] | None:
265
+ arg_21: Decoder_1[Array[Comment]] = resize_array(decoder_4)
266
+ object_arg_10: IOptionalGetter = get.Optional
267
+ return object_arg_10.Field("Comments", arg_21)
268
+
269
+ return ArcRun.create(_arrow3829(), _arrow3831(), _arrow3832(), _arrow3833(), _arrow3837(), _arrow3838(), _arrow3840(), _arrow3841(), _arrow3842(), _arrow3843(), None, None, _arrow3844())
270
+
271
+ return object(_arrow3846)
272
+
273
+
274
+ __all__ = ["encoder", "decoder", "encoder_compressed", "decoder_compressed"]
275
+
@@ -0,0 +1,87 @@
1
+ from __future__ import annotations
2
+ from typing import (Any, TypeVar)
3
+ from ..fable_modules.fable_library.array_ import (fill, map)
4
+ from ..fable_modules.fable_library.map_util import (try_get_value, add_to_dict)
5
+ from ..fable_modules.fable_library.result import FSharpResult_2
6
+ from ..fable_modules.fable_library.seq import iterate
7
+ from ..fable_modules.fable_library.types import Array
8
+ from ..fable_modules.thoth_json_core.decode import (array as array_2, string, int_1)
9
+ from ..fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1, Decoder_1, ErrorReason_1, IDecoderHelpers_1)
10
+ from ..fable_modules.fable_library.types import FSharpRef
11
+
12
+ __A_ = TypeVar("__A_")
13
+
14
+ def array_from_map(otm: Any) -> Array[str]:
15
+ a: Array[str] = fill([0] * len(otm), 0, len(otm), "")
16
+ def action(kv: Any, otm: Any=otm) -> None:
17
+ a[kv[1]] = kv[0]
18
+
19
+ iterate(action, otm)
20
+ return a
21
+
22
+
23
+ def encoder(ot: Array[str]) -> IEncodable:
24
+ def _arrow2632(value: str, ot: Any=ot) -> IEncodable:
25
+ class ObjectExpr2631(IEncodable):
26
+ def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
27
+ return helpers.encode_string(value)
28
+
29
+ return ObjectExpr2631()
30
+
31
+ values: Array[IEncodable] = map(_arrow2632, ot, None)
32
+ class ObjectExpr2633(IEncodable):
33
+ def Encode(self, helpers_1: IEncoderHelpers_1[Any], ot: Any=ot) -> Any:
34
+ def mapping(v: IEncodable) -> __A_:
35
+ return v.Encode(helpers_1)
36
+
37
+ arg: Array[__A_] = map(mapping, values, None)
38
+ return helpers_1.encode_array(arg)
39
+
40
+ return ObjectExpr2633()
41
+
42
+
43
+ decoder: Decoder_1[Array[str]] = array_2(string)
44
+
45
+ def encode_string(otm: Any, s: str) -> IEncodable:
46
+ match_value: int | None
47
+ pattern_input: tuple[bool, int]
48
+ out_arg: int = None or 0
49
+ def _arrow2634(__unit: None=None, otm: Any=otm, s: Any=s) -> int:
50
+ return out_arg
51
+
52
+ def _arrow2635(v: int, otm: Any=otm, s: Any=s) -> None:
53
+ nonlocal out_arg
54
+ out_arg = v or 0
55
+
56
+ pattern_input = (try_get_value(otm, s, FSharpRef(_arrow2634, _arrow2635)), out_arg)
57
+ match_value = pattern_input[1] if pattern_input[0] else None
58
+ if match_value is None:
59
+ i_1: int = len(otm) or 0
60
+ add_to_dict(otm, s, i_1)
61
+ class ObjectExpr2636(IEncodable):
62
+ def Encode(self, helpers_1: IEncoderHelpers_1[Any], otm: Any=otm, s: Any=s) -> Any:
63
+ return helpers_1.encode_signed_integral_number(i_1)
64
+
65
+ return ObjectExpr2636()
66
+
67
+ else:
68
+ i: int = match_value or 0
69
+ class ObjectExpr2637(IEncodable):
70
+ def Encode(self, helpers: IEncoderHelpers_1[Any], otm: Any=otm, s: Any=s) -> Any:
71
+ return helpers.encode_signed_integral_number(i)
72
+
73
+ return ObjectExpr2637()
74
+
75
+
76
+
77
+ def decode_string(ot: Array[str]) -> Decoder_1[str]:
78
+ class ObjectExpr2638(Decoder_1[str]):
79
+ def Decode(self, s: IDecoderHelpers_1[Any], json: Any, ot: Any=ot) -> FSharpResult_2[str, tuple[str, ErrorReason_1[__A_]]]:
80
+ match_value: FSharpResult_2[int, tuple[str, ErrorReason_1[__A_]]] = int_1.Decode(s, json)
81
+ return FSharpResult_2(1, match_value.fields[0]) if (match_value.tag == 1) else FSharpResult_2(0, ot[match_value.fields[0]])
82
+
83
+ return ObjectExpr2638()
84
+
85
+
86
+ __all__ = ["array_from_map", "encoder", "decoder", "encode_string", "decode_string"]
87
+