arctrl 3.0.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- arctrl/__init__.py +23 -0
- arctrl/cwl.py +12 -0
- arctrl/py/CWL/__init__.py +0 -0
- arctrl/py/CWL/cwlprocessing_unit.py +221 -0
- arctrl/py/CWL/cwltypes.py +364 -0
- arctrl/py/CWL/decode.py +3532 -0
- arctrl/py/CWL/encode.py +1905 -0
- arctrl/py/CWL/expression_tool_description.py +192 -0
- arctrl/py/CWL/hash_helpers.py +60 -0
- arctrl/py/CWL/inputs.py +122 -0
- arctrl/py/CWL/operation_description.py +169 -0
- arctrl/py/CWL/outputs.py +171 -0
- arctrl/py/CWL/parameter_reference.py +74 -0
- arctrl/py/CWL/requirements.py +350 -0
- arctrl/py/CWL/tool_description.py +192 -0
- arctrl/py/CWL/workflow_description.py +181 -0
- arctrl/py/CWL/workflow_steps.py +354 -0
- arctrl/py/Contract/__init__.py +0 -0
- arctrl/py/Contract/arc.py +89 -0
- arctrl/py/Contract/arc_assay.py +125 -0
- arctrl/py/Contract/arc_investigation.py +88 -0
- arctrl/py/Contract/arc_run.py +291 -0
- arctrl/py/Contract/arc_study.py +126 -0
- arctrl/py/Contract/arc_workflow.py +213 -0
- arctrl/py/Contract/contract.py +153 -0
- arctrl/py/Contract/datamap.py +396 -0
- arctrl/py/Contract/git.py +116 -0
- arctrl/py/Contract/license.py +58 -0
- arctrl/py/Contract/validation_packages_config.py +107 -0
- arctrl/py/ContractIO/__init__.py +0 -0
- arctrl/py/ContractIO/contract_io.py +350 -0
- arctrl/py/ContractIO/file_system_helper.py +264 -0
- arctrl/py/Conversion/__init__.py +0 -0
- arctrl/py/Conversion/assay.py +151 -0
- arctrl/py/Conversion/basic.py +559 -0
- arctrl/py/Conversion/column_index.py +91 -0
- arctrl/py/Conversion/datamap.py +36 -0
- arctrl/py/Conversion/date_time.py +32 -0
- arctrl/py/Conversion/investigation.py +171 -0
- arctrl/py/Conversion/person.py +148 -0
- arctrl/py/Conversion/process.py +828 -0
- arctrl/py/Conversion/run.py +367 -0
- arctrl/py/Conversion/scholarly_article.py +163 -0
- arctrl/py/Conversion/study.py +99 -0
- arctrl/py/Conversion/table.py +229 -0
- arctrl/py/Conversion/workflow.py +680 -0
- arctrl/py/Core/Helper/__init__.py +0 -0
- arctrl/py/Core/Helper/collections_.py +512 -0
- arctrl/py/Core/Helper/date_time.py +26 -0
- arctrl/py/Core/Helper/hash_codes.py +60 -0
- arctrl/py/Core/Helper/identifier.py +290 -0
- arctrl/py/Core/Helper/orcid.py +42 -0
- arctrl/py/Core/Helper/printer.py +13 -0
- arctrl/py/Core/Helper/regex.py +554 -0
- arctrl/py/Core/Helper/sem_ver.py +71 -0
- arctrl/py/Core/Helper/url.py +148 -0
- arctrl/py/Core/Process/__init__.py +0 -0
- arctrl/py/Core/Process/column_index.py +280 -0
- arctrl/py/Core/Process/component.py +200 -0
- arctrl/py/Core/Process/factor.py +151 -0
- arctrl/py/Core/Process/factor_value.py +182 -0
- arctrl/py/Core/Process/material.py +74 -0
- arctrl/py/Core/Process/material_attribute.py +95 -0
- arctrl/py/Core/Process/material_attribute_value.py +184 -0
- arctrl/py/Core/Process/material_type.py +45 -0
- arctrl/py/Core/Process/process.py +477 -0
- arctrl/py/Core/Process/process_input.py +265 -0
- arctrl/py/Core/Process/process_output.py +235 -0
- arctrl/py/Core/Process/process_parameter_value.py +200 -0
- arctrl/py/Core/Process/process_sequence.py +435 -0
- arctrl/py/Core/Process/protocol.py +175 -0
- arctrl/py/Core/Process/protocol_parameter.py +98 -0
- arctrl/py/Core/Process/sample.py +82 -0
- arctrl/py/Core/Process/source.py +62 -0
- arctrl/py/Core/Table/__init__.py +0 -0
- arctrl/py/Core/Table/arc_table.py +1206 -0
- arctrl/py/Core/Table/arc_table_aux.py +1308 -0
- arctrl/py/Core/Table/arc_tables.py +574 -0
- arctrl/py/Core/Table/composite_cell.py +319 -0
- arctrl/py/Core/Table/composite_column.py +73 -0
- arctrl/py/Core/Table/composite_header.py +739 -0
- arctrl/py/Core/__init__.py +0 -0
- arctrl/py/Core/arc_types.py +5312 -0
- arctrl/py/Core/comment.py +128 -0
- arctrl/py/Core/comment_list.py +127 -0
- arctrl/py/Core/conversion.py +1375 -0
- arctrl/py/Core/data.py +247 -0
- arctrl/py/Core/data_context.py +157 -0
- arctrl/py/Core/data_file.py +112 -0
- arctrl/py/Core/datamap.py +217 -0
- arctrl/py/Core/identifier_setters.py +43 -0
- arctrl/py/Core/iproperty_value.py +36 -0
- arctrl/py/Core/ontology_annotation.py +298 -0
- arctrl/py/Core/ontology_source_reference.py +114 -0
- arctrl/py/Core/person.py +259 -0
- arctrl/py/Core/publication.py +161 -0
- arctrl/py/Core/template.py +231 -0
- arctrl/py/Core/templates.py +148 -0
- arctrl/py/Core/uri.py +11 -0
- arctrl/py/Core/value.py +188 -0
- arctrl/py/FileSystem/__init__.py +0 -0
- arctrl/py/FileSystem/commit.py +21 -0
- arctrl/py/FileSystem/default_gitattributes.py +1 -0
- arctrl/py/FileSystem/default_gitignore.py +1 -0
- arctrl/py/FileSystem/default_license.py +1 -0
- arctrl/py/FileSystem/file_system.py +58 -0
- arctrl/py/FileSystem/file_system_tree.py +483 -0
- arctrl/py/FileSystem/path.py +266 -0
- arctrl/py/Json/Datamap/__init__.py +0 -0
- arctrl/py/Json/Datamap/data_context.py +101 -0
- arctrl/py/Json/Datamap/datamap.py +53 -0
- arctrl/py/Json/Process/__init__.py +0 -0
- arctrl/py/Json/Process/assay_materials.py +46 -0
- arctrl/py/Json/Process/component.py +125 -0
- arctrl/py/Json/Process/factor.py +107 -0
- arctrl/py/Json/Process/factor_value.py +101 -0
- arctrl/py/Json/Process/material.py +226 -0
- arctrl/py/Json/Process/material_attribute.py +79 -0
- arctrl/py/Json/Process/material_attribute_value.py +101 -0
- arctrl/py/Json/Process/material_type.py +53 -0
- arctrl/py/Json/Process/process.py +296 -0
- arctrl/py/Json/Process/process_input.py +83 -0
- arctrl/py/Json/Process/process_output.py +67 -0
- arctrl/py/Json/Process/process_parameter_value.py +81 -0
- arctrl/py/Json/Process/protocol.py +354 -0
- arctrl/py/Json/Process/protocol_parameter.py +91 -0
- arctrl/py/Json/Process/sample.py +277 -0
- arctrl/py/Json/Process/source.py +214 -0
- arctrl/py/Json/Process/study_materials.py +52 -0
- arctrl/py/Json/Process/value.py +56 -0
- arctrl/py/Json/ROCrate/__init__.py +0 -0
- arctrl/py/Json/ROCrate/ldcontext.py +143 -0
- arctrl/py/Json/ROCrate/ldgraph.py +117 -0
- arctrl/py/Json/ROCrate/ldnode.py +304 -0
- arctrl/py/Json/ROCrate/ldref.py +44 -0
- arctrl/py/Json/ROCrate/ldvalue.py +102 -0
- arctrl/py/Json/Table/__init__.py +0 -0
- arctrl/py/Json/Table/arc_table.py +375 -0
- arctrl/py/Json/Table/cell_table.py +83 -0
- arctrl/py/Json/Table/composite_cell.py +136 -0
- arctrl/py/Json/Table/composite_header.py +67 -0
- arctrl/py/Json/Table/iotype.py +24 -0
- arctrl/py/Json/Table/oatable.py +82 -0
- arctrl/py/Json/Table/templates.py +281 -0
- arctrl/py/Json/__init__.py +0 -0
- arctrl/py/Json/assay.py +600 -0
- arctrl/py/Json/comment.py +206 -0
- arctrl/py/Json/context/rocrate/__init__.py +0 -0
- arctrl/py/Json/context/rocrate/isa_assay_context.py +101 -0
- arctrl/py/Json/context/rocrate/isa_comment_context.py +60 -0
- arctrl/py/Json/context/rocrate/isa_component_context.py +77 -0
- arctrl/py/Json/context/rocrate/isa_data_context.py +74 -0
- arctrl/py/Json/context/rocrate/isa_factor_context.py +74 -0
- arctrl/py/Json/context/rocrate/isa_factor_value_context.py +84 -0
- arctrl/py/Json/context/rocrate/isa_investigation_context.py +110 -0
- arctrl/py/Json/context/rocrate/isa_material_attribute_context.py +64 -0
- arctrl/py/Json/context/rocrate/isa_material_attribute_value_context.py +80 -0
- arctrl/py/Json/context/rocrate/isa_material_context.py +71 -0
- arctrl/py/Json/context/rocrate/isa_ontology_annotation_context.py +68 -0
- arctrl/py/Json/context/rocrate/isa_ontology_source_reference_context.py +75 -0
- arctrl/py/Json/context/rocrate/isa_organization_context.py +55 -0
- arctrl/py/Json/context/rocrate/isa_person_context.py +131 -0
- arctrl/py/Json/context/rocrate/isa_process_context.py +94 -0
- arctrl/py/Json/context/rocrate/isa_process_parameter_value_context.py +80 -0
- arctrl/py/Json/context/rocrate/isa_protocol_context.py +97 -0
- arctrl/py/Json/context/rocrate/isa_protocol_parameter_context.py +64 -0
- arctrl/py/Json/context/rocrate/isa_publication_context.py +78 -0
- arctrl/py/Json/context/rocrate/isa_sample_context.py +65 -0
- arctrl/py/Json/context/rocrate/isa_source_context.py +66 -0
- arctrl/py/Json/context/rocrate/isa_study_context.py +125 -0
- arctrl/py/Json/context/rocrate/property_value_context.py +73 -0
- arctrl/py/Json/context/rocrate/rocrate_context.py +81 -0
- arctrl/py/Json/converter_options.py +23 -0
- arctrl/py/Json/data.py +356 -0
- arctrl/py/Json/data_file.py +63 -0
- arctrl/py/Json/decode.py +271 -0
- arctrl/py/Json/encode.py +140 -0
- arctrl/py/Json/idtable.py +44 -0
- arctrl/py/Json/investigation.py +695 -0
- arctrl/py/Json/ontology_annotation.py +404 -0
- arctrl/py/Json/ontology_source_reference.py +255 -0
- arctrl/py/Json/person.py +658 -0
- arctrl/py/Json/property_value.py +359 -0
- arctrl/py/Json/publication.py +279 -0
- arctrl/py/Json/run.py +275 -0
- arctrl/py/Json/string_table.py +87 -0
- arctrl/py/Json/study.py +793 -0
- arctrl/py/Json/workflow.py +307 -0
- arctrl/py/JsonIO/Process/__init__.py +0 -0
- arctrl/py/JsonIO/Process/component.py +60 -0
- arctrl/py/JsonIO/Process/factor.py +36 -0
- arctrl/py/JsonIO/Process/factor_value.py +38 -0
- arctrl/py/JsonIO/Process/material.py +60 -0
- arctrl/py/JsonIO/Process/material_attribute.py +38 -0
- arctrl/py/JsonIO/Process/material_attribute_value.py +60 -0
- arctrl/py/JsonIO/Process/material_type.py +36 -0
- arctrl/py/JsonIO/Process/process.py +60 -0
- arctrl/py/JsonIO/Process/process_input.py +38 -0
- arctrl/py/JsonIO/Process/process_output.py +60 -0
- arctrl/py/JsonIO/Process/process_parameter_value.py +60 -0
- arctrl/py/JsonIO/Process/process_sequence.py +71 -0
- arctrl/py/JsonIO/Process/protocol.py +60 -0
- arctrl/py/JsonIO/Process/protocol_parameter.py +36 -0
- arctrl/py/JsonIO/Process/sample.py +60 -0
- arctrl/py/JsonIO/Process/source.py +60 -0
- arctrl/py/JsonIO/Process/study_materials.py +52 -0
- arctrl/py/JsonIO/Process/value.py +32 -0
- arctrl/py/JsonIO/Table/__init__.py +0 -0
- arctrl/py/JsonIO/Table/arc_table.py +103 -0
- arctrl/py/JsonIO/Table/composite_cell.py +36 -0
- arctrl/py/JsonIO/Table/composite_header.py +36 -0
- arctrl/py/JsonIO/Table/compression.py +67 -0
- arctrl/py/JsonIO/Table/iotype.py +36 -0
- arctrl/py/JsonIO/Table/templates.py +113 -0
- arctrl/py/JsonIO/__init__.py +0 -0
- arctrl/py/JsonIO/assay.py +113 -0
- arctrl/py/JsonIO/comment.py +80 -0
- arctrl/py/JsonIO/data.py +60 -0
- arctrl/py/JsonIO/data_file.py +58 -0
- arctrl/py/JsonIO/datamap.py +36 -0
- arctrl/py/JsonIO/decode.py +9 -0
- arctrl/py/JsonIO/encode.py +1 -0
- arctrl/py/JsonIO/investigation.py +91 -0
- arctrl/py/JsonIO/ldobject.py +106 -0
- arctrl/py/JsonIO/ontology_annotation.py +80 -0
- arctrl/py/JsonIO/ontology_source_reference.py +80 -0
- arctrl/py/JsonIO/person.py +82 -0
- arctrl/py/JsonIO/publication.py +82 -0
- arctrl/py/JsonIO/run.py +68 -0
- arctrl/py/JsonIO/study.py +114 -0
- arctrl/py/JsonIO/workflow.py +68 -0
- arctrl/py/ROCrate/ISAProfile/__init__.py +0 -0
- arctrl/py/ROCrate/ISAProfile/assay.py +70 -0
- arctrl/py/ROCrate/ISAProfile/data.py +65 -0
- arctrl/py/ROCrate/ISAProfile/dataset.py +24 -0
- arctrl/py/ROCrate/ISAProfile/investigation.py +73 -0
- arctrl/py/ROCrate/ISAProfile/lab_process.py +162 -0
- arctrl/py/ROCrate/ISAProfile/lab_protocol.py +37 -0
- arctrl/py/ROCrate/ISAProfile/person.py +72 -0
- arctrl/py/ROCrate/ISAProfile/property_value.py +98 -0
- arctrl/py/ROCrate/ISAProfile/sample.py +64 -0
- arctrl/py/ROCrate/ISAProfile/scholarly_article.py +98 -0
- arctrl/py/ROCrate/ISAProfile/study.py +74 -0
- arctrl/py/ROCrate/LDTypes/__init__.py +0 -0
- arctrl/py/ROCrate/LDTypes/comment.py +131 -0
- arctrl/py/ROCrate/LDTypes/computational_workflow.py +455 -0
- arctrl/py/ROCrate/LDTypes/computer_language.py +269 -0
- arctrl/py/ROCrate/LDTypes/create_action.py +303 -0
- arctrl/py/ROCrate/LDTypes/creative_work.py +566 -0
- arctrl/py/ROCrate/LDTypes/dataset.py +943 -0
- arctrl/py/ROCrate/LDTypes/defined_term.py +131 -0
- arctrl/py/ROCrate/LDTypes/file.py +281 -0
- arctrl/py/ROCrate/LDTypes/formal_parameter.py +431 -0
- arctrl/py/ROCrate/LDTypes/lab_process.py +352 -0
- arctrl/py/ROCrate/LDTypes/lab_protocol.py +395 -0
- arctrl/py/ROCrate/LDTypes/organization.py +83 -0
- arctrl/py/ROCrate/LDTypes/person.py +484 -0
- arctrl/py/ROCrate/LDTypes/postal_address.py +195 -0
- arctrl/py/ROCrate/LDTypes/property_value.py +952 -0
- arctrl/py/ROCrate/LDTypes/sample.py +202 -0
- arctrl/py/ROCrate/LDTypes/scholarly_article.py +229 -0
- arctrl/py/ROCrate/LDTypes/software_source_code.py +310 -0
- arctrl/py/ROCrate/LDTypes/workflow_invocation.py +48 -0
- arctrl/py/ROCrate/LDTypes/workflow_protocol.py +52 -0
- arctrl/py/ROCrate/__init__.py +0 -0
- arctrl/py/ROCrate/arc_rocrate_metadata.py +39 -0
- arctrl/py/ROCrate/dyn_obj_extensions.py +1 -0
- arctrl/py/ROCrate/helper.py +8 -0
- arctrl/py/ROCrate/ldcontext.py +406 -0
- arctrl/py/ROCrate/ldobject.py +1247 -0
- arctrl/py/ROCrate/rocrate_context.py +51 -0
- arctrl/py/Spreadsheet/AnnotationTable/__init__.py +0 -0
- arctrl/py/Spreadsheet/AnnotationTable/arc_table.py +203 -0
- arctrl/py/Spreadsheet/AnnotationTable/composite_cell.py +78 -0
- arctrl/py/Spreadsheet/AnnotationTable/composite_column.py +305 -0
- arctrl/py/Spreadsheet/AnnotationTable/composite_header.py +623 -0
- arctrl/py/Spreadsheet/DatamapTable/__init__.py +0 -0
- arctrl/py/Spreadsheet/DatamapTable/datamap_column.py +114 -0
- arctrl/py/Spreadsheet/DatamapTable/datamap_header.py +621 -0
- arctrl/py/Spreadsheet/DatamapTable/datamap_table.py +118 -0
- arctrl/py/Spreadsheet/Metadata/__init__.py +0 -0
- arctrl/py/Spreadsheet/Metadata/assays.py +125 -0
- arctrl/py/Spreadsheet/Metadata/comment.py +77 -0
- arctrl/py/Spreadsheet/Metadata/contacts.py +134 -0
- arctrl/py/Spreadsheet/Metadata/conversions.py +190 -0
- arctrl/py/Spreadsheet/Metadata/design_descriptors.py +34 -0
- arctrl/py/Spreadsheet/Metadata/factors.py +107 -0
- arctrl/py/Spreadsheet/Metadata/ontology_annotation.py +88 -0
- arctrl/py/Spreadsheet/Metadata/ontology_source_reference.py +96 -0
- arctrl/py/Spreadsheet/Metadata/protocols.py +146 -0
- arctrl/py/Spreadsheet/Metadata/publication.py +122 -0
- arctrl/py/Spreadsheet/Metadata/run.py +122 -0
- arctrl/py/Spreadsheet/Metadata/sparse_table.py +499 -0
- arctrl/py/Spreadsheet/Metadata/study.py +312 -0
- arctrl/py/Spreadsheet/Metadata/workflow.py +159 -0
- arctrl/py/Spreadsheet/__init__.py +0 -0
- arctrl/py/Spreadsheet/arc_assay.py +233 -0
- arctrl/py/Spreadsheet/arc_investigation.py +435 -0
- arctrl/py/Spreadsheet/arc_run.py +190 -0
- arctrl/py/Spreadsheet/arc_study.py +144 -0
- arctrl/py/Spreadsheet/arc_workflow.py +177 -0
- arctrl/py/Spreadsheet/assembly_info.py +1 -0
- arctrl/py/Spreadsheet/collection_aux.py +167 -0
- arctrl/py/Spreadsheet/datamap.py +43 -0
- arctrl/py/Spreadsheet/template.py +460 -0
- arctrl/py/ValidationPackages/__init__.py +0 -0
- arctrl/py/ValidationPackages/validation_package.py +82 -0
- arctrl/py/ValidationPackages/validation_packages_config.py +132 -0
- arctrl/py/WebRequest/__init__.py +0 -0
- arctrl/py/WebRequest/web_request.py +9 -0
- arctrl/py/WebRequest/web_request_py.py +135 -0
- arctrl/py/WorkflowGraph/__init__.py +0 -0
- arctrl/py/WorkflowGraph/adapters.py +141 -0
- arctrl/py/WorkflowGraph/build_options.py +45 -0
- arctrl/py/WorkflowGraph/builder.py +720 -0
- arctrl/py/WorkflowGraph/graph_types.py +260 -0
- arctrl/py/WorkflowGraph/query_helpers.py +76 -0
- arctrl/py/WorkflowGraph/reference_parsing.py +59 -0
- arctrl/py/WorkflowGraph/visualization_siren.py +574 -0
- arctrl/py/WorkflowGraph/workflow_graph.py +119 -0
- arctrl/py/Yaml/__init__.py +0 -0
- arctrl/py/Yaml/decode.py +1 -0
- arctrl/py/Yaml/encode.py +10 -0
- arctrl/py/Yaml/validation_package.py +77 -0
- arctrl/py/Yaml/validation_packages_config.py +86 -0
- arctrl/py/__init__.py +0 -0
- arctrl/py/arc.py +1891 -0
- arctrl/py/column_index.py +280 -0
- arctrl/py/conversion.py +142 -0
- arctrl/py/cross_async.py +76 -0
- arctrl/py/cwlrun_resolver.py +228 -0
- arctrl/py/fable_modules/dynamic_obj/__init__.py +0 -0
- arctrl/py/fable_modules/dynamic_obj/dyn_obj.py +136 -0
- arctrl/py/fable_modules/dynamic_obj/dynamic_obj.py +415 -0
- arctrl/py/fable_modules/dynamic_obj/fable_js.py +1 -0
- arctrl/py/fable_modules/dynamic_obj/fable_py.py +288 -0
- arctrl/py/fable_modules/dynamic_obj/hash_codes.py +82 -0
- arctrl/py/fable_modules/dynamic_obj/property_helper.py +25 -0
- arctrl/py/fable_modules/dynamic_obj/reflection_utils.py +87 -0
- arctrl/py/fable_modules/fable_library/__init__.py +0 -0
- arctrl/py/fable_modules/fable_library/array_.py +1528 -0
- arctrl/py/fable_modules/fable_library/async_.py +377 -0
- arctrl/py/fable_modules/fable_library/async_builder.py +379 -0
- arctrl/py/fable_modules/fable_library/big_int.py +330 -0
- arctrl/py/fable_modules/fable_library/bit_converter.py +131 -0
- arctrl/py/fable_modules/fable_library/boolean.py +26 -0
- arctrl/py/fable_modules/fable_library/char.py +237 -0
- arctrl/py/fable_modules/fable_library/choice.py +212 -0
- arctrl/py/fable_modules/fable_library/date.py +779 -0
- arctrl/py/fable_modules/fable_library/date_offset.py +79 -0
- arctrl/py/fable_modules/fable_library/decimal_.py +190 -0
- arctrl/py/fable_modules/fable_library/diagnostics.py +54 -0
- arctrl/py/fable_modules/fable_library/double.py +87 -0
- arctrl/py/fable_modules/fable_library/encoding.py +41 -0
- arctrl/py/fable_modules/fable_library/event.py +206 -0
- arctrl/py/fable_modules/fable_library/file.py +107 -0
- arctrl/py/fable_modules/fable_library/fsharp_collections.py +52 -0
- arctrl/py/fable_modules/fable_library/fsharp_core.py +123 -0
- arctrl/py/fable_modules/fable_library/global_.py +63 -0
- arctrl/py/fable_modules/fable_library/guid.py +41 -0
- arctrl/py/fable_modules/fable_library/int32.py +73 -0
- arctrl/py/fable_modules/fable_library/list.py +1788 -0
- arctrl/py/fable_modules/fable_library/long.py +240 -0
- arctrl/py/fable_modules/fable_library/mailbox_processor.py +179 -0
- arctrl/py/fable_modules/fable_library/map.py +1854 -0
- arctrl/py/fable_modules/fable_library/map_util.py +148 -0
- arctrl/py/fable_modules/fable_library/mutable_map.py +397 -0
- arctrl/py/fable_modules/fable_library/mutable_set.py +279 -0
- arctrl/py/fable_modules/fable_library/native.py +45 -0
- arctrl/py/fable_modules/fable_library/numeric.py +46 -0
- arctrl/py/fable_modules/fable_library/observable.py +222 -0
- arctrl/py/fable_modules/fable_library/option.py +128 -0
- arctrl/py/fable_modules/fable_library/path.py +62 -0
- arctrl/py/fable_modules/fable_library/range.py +117 -0
- arctrl/py/fable_modules/fable_library/reflection.py +463 -0
- arctrl/py/fable_modules/fable_library/reg_exp.py +137 -0
- arctrl/py/fable_modules/fable_library/resize_array.py +31 -0
- arctrl/py/fable_modules/fable_library/result.py +212 -0
- arctrl/py/fable_modules/fable_library/seq.py +1979 -0
- arctrl/py/fable_modules/fable_library/seq2.py +221 -0
- arctrl/py/fable_modules/fable_library/set.py +2414 -0
- arctrl/py/fable_modules/fable_library/singleton_local_time_zone.py +36 -0
- arctrl/py/fable_modules/fable_library/string_.py +573 -0
- arctrl/py/fable_modules/fable_library/system_collections_generic.py +462 -0
- arctrl/py/fable_modules/fable_library/system_text.py +237 -0
- arctrl/py/fable_modules/fable_library/task.py +116 -0
- arctrl/py/fable_modules/fable_library/task_builder.py +122 -0
- arctrl/py/fable_modules/fable_library/thread.py +5 -0
- arctrl/py/fable_modules/fable_library/time_span.py +283 -0
- arctrl/py/fable_modules/fable_library/timer.py +24 -0
- arctrl/py/fable_modules/fable_library/types.py +401 -0
- arctrl/py/fable_modules/fable_library/uri.py +109 -0
- arctrl/py/fable_modules/fable_library/util.py +2735 -0
- arctrl/py/fable_modules/fable_openpyxl/__init__.py +0 -0
- arctrl/py/fable_modules/fable_openpyxl/openpyxl.py +362 -0
- arctrl/py/fable_modules/fable_python/cognite-sdk/__init__.py +0 -0
- arctrl/py/fable_modules/fable_python/cognite-sdk/cognite_sdk.py +22 -0
- arctrl/py/fable_modules/fable_python/flask/__init__.py +0 -0
- arctrl/py/fable_modules/fable_python/flask/flask.py +34 -0
- arctrl/py/fable_modules/fable_python/jupyter/__init__.py +0 -0
- arctrl/py/fable_modules/fable_python/jupyter/ipy_widgets.py +47 -0
- arctrl/py/fable_modules/fable_python/jupyter/ipython.py +13 -0
- arctrl/py/fable_modules/fable_python/stdlib/__init__.py +0 -0
- arctrl/py/fable_modules/fable_python/stdlib/ast.py +1 -0
- arctrl/py/fable_modules/fable_python/stdlib/asyncio/__init__.py +0 -0
- arctrl/py/fable_modules/fable_python/stdlib/asyncio/events.py +17 -0
- arctrl/py/fable_modules/fable_python/stdlib/asyncio/futures.py +52 -0
- arctrl/py/fable_modules/fable_python/stdlib/asyncio/tasks.py +38 -0
- arctrl/py/fable_modules/fable_python/stdlib/base64_.py +1 -0
- arctrl/py/fable_modules/fable_python/stdlib/builtins_.py +38 -0
- arctrl/py/fable_modules/fable_python/stdlib/html.py +1 -0
- arctrl/py/fable_modules/fable_python/stdlib/json.py +1 -0
- arctrl/py/fable_modules/fable_python/stdlib/math_.py +1 -0
- arctrl/py/fable_modules/fable_python/stdlib/os_.py +1 -0
- arctrl/py/fable_modules/fable_python/stdlib/queue_.py +1 -0
- arctrl/py/fable_modules/fable_python/stdlib/string_.py +1 -0
- arctrl/py/fable_modules/fable_python/stdlib/sys_.py +30 -0
- arctrl/py/fable_modules/fable_python/stdlib/time_.py +1 -0
- arctrl/py/fable_modules/fable_python/stdlib/tk_inter.py +1 -0
- arctrl/py/fable_modules/fs_spreadsheet/Cells/__init__.py +0 -0
- arctrl/py/fable_modules/fs_spreadsheet/Cells/fs_cell.py +340 -0
- arctrl/py/fable_modules/fs_spreadsheet/Cells/fs_cells_collection.py +466 -0
- arctrl/py/fable_modules/fs_spreadsheet/DSL/__init__.py +0 -0
- arctrl/py/fable_modules/fs_spreadsheet/DSL/cell_builder.py +214 -0
- arctrl/py/fable_modules/fs_spreadsheet/DSL/column_builder.py +139 -0
- arctrl/py/fable_modules/fs_spreadsheet/DSL/dsl.py +50 -0
- arctrl/py/fable_modules/fs_spreadsheet/DSL/expression.py +65 -0
- arctrl/py/fable_modules/fs_spreadsheet/DSL/operators.py +9 -0
- arctrl/py/fable_modules/fs_spreadsheet/DSL/row_builder.py +139 -0
- arctrl/py/fable_modules/fs_spreadsheet/DSL/sheet_builder.py +118 -0
- arctrl/py/fable_modules/fs_spreadsheet/DSL/table_builder.py +122 -0
- arctrl/py/fable_modules/fs_spreadsheet/DSL/transform.py +463 -0
- arctrl/py/fable_modules/fs_spreadsheet/DSL/types.py +314 -0
- arctrl/py/fable_modules/fs_spreadsheet/DSL/workbook_builder.py +106 -0
- arctrl/py/fable_modules/fs_spreadsheet/Json/__init__.py +0 -0
- arctrl/py/fable_modules/fs_spreadsheet/Json/cell.py +103 -0
- arctrl/py/fable_modules/fs_spreadsheet/Json/column.py +70 -0
- arctrl/py/fable_modules/fs_spreadsheet/Json/row.py +70 -0
- arctrl/py/fable_modules/fs_spreadsheet/Json/table.py +54 -0
- arctrl/py/fable_modules/fs_spreadsheet/Json/value.py +93 -0
- arctrl/py/fable_modules/fs_spreadsheet/Json/workbook.py +71 -0
- arctrl/py/fable_modules/fs_spreadsheet/Json/worksheet.py +216 -0
- arctrl/py/fable_modules/fs_spreadsheet/Ranges/__init__.py +0 -0
- arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range.py +43 -0
- arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_address.py +190 -0
- arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_base.py +92 -0
- arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_column.py +77 -0
- arctrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_row.py +48 -0
- arctrl/py/fable_modules/fs_spreadsheet/Tables/__init__.py +0 -0
- arctrl/py/fable_modules/fs_spreadsheet/Tables/fs_table.py +461 -0
- arctrl/py/fable_modules/fs_spreadsheet/Tables/fs_table_field.py +117 -0
- arctrl/py/fable_modules/fs_spreadsheet/Tables/fs_table_row.py +23 -0
- arctrl/py/fable_modules/fs_spreadsheet/__init__.py +0 -0
- arctrl/py/fable_modules/fs_spreadsheet/fs_address.py +236 -0
- arctrl/py/fable_modules/fs_spreadsheet/fs_column.py +172 -0
- arctrl/py/fable_modules/fs_spreadsheet/fs_row.py +183 -0
- arctrl/py/fable_modules/fs_spreadsheet/fs_workbook.py +192 -0
- arctrl/py/fable_modules/fs_spreadsheet/fs_worksheet.py +610 -0
- arctrl/py/fable_modules/fs_spreadsheet/hash_codes.py +60 -0
- arctrl/py/fable_modules/fs_spreadsheet/sheet_builder.py +329 -0
- arctrl/py/fable_modules/fs_spreadsheet_py/__init__.py +0 -0
- arctrl/py/fable_modules/fs_spreadsheet_py/cell.py +60 -0
- arctrl/py/fable_modules/fs_spreadsheet_py/cell_type.py +50 -0
- arctrl/py/fable_modules/fs_spreadsheet_py/fs_extension.py +60 -0
- arctrl/py/fable_modules/fs_spreadsheet_py/json.py +47 -0
- arctrl/py/fable_modules/fs_spreadsheet_py/table.py +54 -0
- arctrl/py/fable_modules/fs_spreadsheet_py/workbook.py +41 -0
- arctrl/py/fable_modules/fs_spreadsheet_py/worksheet.py +52 -0
- arctrl/py/fable_modules/fs_spreadsheet_py/xlsx.py +37 -0
- arctrl/py/fable_modules/siren/__init__.py +0 -0
- arctrl/py/fable_modules/siren/config.py +1038 -0
- arctrl/py/fable_modules/siren/formatting.py +1121 -0
- arctrl/py/fable_modules/siren/siren.py +1941 -0
- arctrl/py/fable_modules/siren/siren_types.py +1229 -0
- arctrl/py/fable_modules/siren/theme_variables.py +517 -0
- arctrl/py/fable_modules/siren/util.py +37 -0
- arctrl/py/fable_modules/siren/yaml.py +101 -0
- arctrl/py/fable_modules/thoth_json_core/__init__.py +0 -0
- arctrl/py/fable_modules/thoth_json_core/decode.py +1614 -0
- arctrl/py/fable_modules/thoth_json_core/encode.py +305 -0
- arctrl/py/fable_modules/thoth_json_core/types.py +181 -0
- arctrl/py/fable_modules/thoth_json_python/__init__.py +0 -0
- arctrl/py/fable_modules/thoth_json_python/decode.py +112 -0
- arctrl/py/fable_modules/thoth_json_python/encode.py +72 -0
- arctrl/py/fable_modules/thoth_json_python/python.py +1 -0
- arctrl/py/fable_modules/yamlicious/Interop/__init__.py +0 -0
- arctrl/py/fable_modules/yamlicious/Interop/js_interop.py +1 -0
- arctrl/py/fable_modules/yamlicious/Interop/py_interop.py +7 -0
- arctrl/py/fable_modules/yamlicious/__init__.py +0 -0
- arctrl/py/fable_modules/yamlicious/decode.py +1784 -0
- arctrl/py/fable_modules/yamlicious/encode.py +84 -0
- arctrl/py/fable_modules/yamlicious/flow_to_block.py +994 -0
- arctrl/py/fable_modules/yamlicious/library.py +10 -0
- arctrl/py/fable_modules/yamlicious/persil.py +57 -0
- arctrl/py/fable_modules/yamlicious/preprocessing.py +99 -0
- arctrl/py/fable_modules/yamlicious/reader.py +739 -0
- arctrl/py/fable_modules/yamlicious/regex.py +29 -0
- arctrl/py/fable_modules/yamlicious/regex_active_patterns.py +265 -0
- arctrl/py/fable_modules/yamlicious/writer.py +175 -0
- arctrl/py/fable_modules/yamlicious/yamlicious_types.py +128 -0
- arctrl/py/json.py +389 -0
- arctrl/py/license.py +169 -0
- arctrl/py/rocrate_io.py +242 -0
- arctrl/py/template_web.py +23 -0
- arctrl/py/xlsx.py +212 -0
- arctrl/py/yaml.py +79 -0
- arctrl/rocrate.py +21 -0
- arctrl-3.0.0.dist-info/METADATA +157 -0
- arctrl-3.0.0.dist-info/RECORD +511 -0
- arctrl-3.0.0.dist-info/WHEEL +4 -0
- arctrl-3.0.0.dist-info/licenses/LICENSE +21 -0
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from collections.abc import Callable
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from typing import (Any, TypeVar)
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from ...fable_modules.fable_library.array_ import (iterate_indexed, fold, fill)
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from ...fable_modules.fable_library.list import (FSharpList, empty as empty_1, of_array)
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from ...fable_modules.fable_library.map import empty as empty_2
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from ...fable_modules.fable_library.map_util import get_item_from_dict
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from ...fable_modules.fable_library.result import FSharpResult_2
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from ...fable_modules.fable_library.seq import (to_list, delay, append, singleton, map, empty)
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from ...fable_modules.fable_library.types import Array
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from ...fable_modules.fable_library.util import (IEnumerable_1, compare_arrays, equal_arrays, array_hash, get_enumerator, dispose, int32_to_string, ignore)
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from ...fable_modules.thoth_json_core.decode import (object, list_1 as list_1_1, IOptionalGetter, map_0027, tuple2, int_1, IRequiredGetter, string, IGetters, map as map_1, resize_array, array as array_1, Helpers_prependPath)
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from ...fable_modules.thoth_json_core.encode import list_1
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from ...fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1, Decoder_1, IDecoderHelpers_1, ErrorReason_1)
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from ...Core.ontology_annotation import OntologyAnnotation
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from ...Core.Table.arc_table import ArcTable
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from ...Core.Table.arc_table_aux import (ColumnValueRefs, ensure_cell_hash_in_value_map, ArcTableValues, Unchecked_setCellAt)
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from ...Core.Table.composite_header import CompositeHeader
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from ..decode import (Decode_tryOneOf, Decode_intDictionary, Decode_dictionary)
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from ..encode import int_dictionary
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from ..string_table import (encode_string, decode_string)
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from .cell_table import (decode_cell, encode_cell)
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from .composite_cell import (encoder as encoder_1, decoder as decoder_3)
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from .composite_header import (encoder as encoder_2, decoder as decoder_2)
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def encoder(table: ArcTable) -> IEncodable:
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def cell_encoder(hash_1: int, table: Any=table) -> IEncodable:
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def _arrow3472(__unit: None=None, table: Any=table) -> IEnumerable_1[tuple[str, IEncodable]]:
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def _arrow3459(__unit: None=None) -> IEncodable:
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value: str = table.Name
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def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
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+
def _arrow3471(__unit: None=None) -> IEnumerable_1[tuple[str, IEncodable]]:
|
|
50
|
+
def _arrow3464(__unit: None=None) -> IEnumerable_1[IEncodable]:
|
|
51
|
+
return map(encoder_2, table.Headers)
|
|
52
|
+
|
|
53
|
+
def _arrow3470(__unit: None=None) -> IEnumerable_1[tuple[str, IEncodable]]:
|
|
54
|
+
def column_encoder(col: ColumnValueRefs) -> IEncodable:
|
|
55
|
+
if col.tag == 1:
|
|
56
|
+
return int_dictionary(cell_encoder, col.fields[0])
|
|
57
|
+
|
|
58
|
+
else:
|
|
59
|
+
return cell_encoder(col.fields[0])
|
|
60
|
+
|
|
61
|
+
|
|
62
|
+
def _arrow3469(__unit: None=None) -> IEnumerable_1[tuple[str, IEncodable]]:
|
|
63
|
+
def _arrow3468(__unit: None=None) -> IEncodable:
|
|
64
|
+
value_1: int = table.RowCount or 0
|
|
65
|
+
class ObjectExpr3467(IEncodable):
|
|
66
|
+
def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
|
|
67
|
+
return helpers_1.encode_signed_integral_number(value_1)
|
|
68
|
+
|
|
69
|
+
return ObjectExpr3467()
|
|
70
|
+
|
|
71
|
+
return singleton(("rowCount", _arrow3468()))
|
|
72
|
+
|
|
73
|
+
return append(singleton(("columns", int_dictionary(column_encoder, table.Values.Columns))), delay(_arrow3469)) if (table.Values.RowCount != 0) else empty()
|
|
74
|
+
|
|
75
|
+
return append(singleton(("headers", list_1(to_list(delay(_arrow3464))))) if (len(table.Headers) != 0) else empty(), delay(_arrow3470))
|
|
76
|
+
|
|
77
|
+
return append(singleton(("name", _arrow3459())), delay(_arrow3471))
|
|
78
|
+
|
|
79
|
+
values: IEnumerable_1[tuple[str, IEncodable]] = to_list(delay(_arrow3472))
|
|
80
|
+
class ObjectExpr3475(IEncodable):
|
|
81
|
+
def Encode(self, helpers_2: IEncoderHelpers_1[Any], table: Any=table) -> Any:
|
|
82
|
+
def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
|
|
83
|
+
return (tupled_arg[0], tupled_arg[1].Encode(helpers_2))
|
|
84
|
+
|
|
85
|
+
arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
|
|
86
|
+
return helpers_2.encode_object(arg)
|
|
87
|
+
|
|
88
|
+
return ObjectExpr3475()
|
|
89
|
+
|
|
90
|
+
|
|
91
|
+
def _arrow3486(get: IGetters) -> ArcTable:
|
|
92
|
+
def _arrow3480(__unit: None=None) -> FSharpList[CompositeHeader] | None:
|
|
93
|
+
arg_1: Decoder_1[FSharpList[CompositeHeader]] = list_1_1(decoder_2)
|
|
94
|
+
object_arg: IOptionalGetter = get.Optional
|
|
95
|
+
return object_arg.Field("header", arg_1)
|
|
96
|
+
|
|
97
|
+
decoded_header: Array[CompositeHeader] = list(default_arg(_arrow3480(), empty_1()))
|
|
98
|
+
def _arrow3481(__unit: None=None) -> Any | None:
|
|
99
|
+
arg_3: Decoder_1[Any] = map_0027(tuple2(int_1, int_1), decoder_3)
|
|
100
|
+
object_arg_1: IOptionalGetter = get.Optional
|
|
101
|
+
return object_arg_1.Field("values", arg_3)
|
|
102
|
+
|
|
103
|
+
class ObjectExpr3482:
|
|
104
|
+
@property
|
|
105
|
+
def Compare(self) -> Callable[[tuple[int, int], tuple[int, int]], int]:
|
|
106
|
+
return compare_arrays
|
|
107
|
+
|
|
108
|
+
class ObjectExpr3483:
|
|
109
|
+
@property
|
|
110
|
+
def Equals(self) -> Callable[[tuple[int, int], tuple[int, int]], bool]:
|
|
111
|
+
return equal_arrays
|
|
112
|
+
|
|
113
|
+
@property
|
|
114
|
+
def GetHashCode(self) -> Callable[[tuple[int, int]], int]:
|
|
115
|
+
return array_hash
|
|
116
|
+
|
|
117
|
+
decoded_values: Any = Dictionary(default_arg(_arrow3481(), empty_2(ObjectExpr3482())), ObjectExpr3483())
|
|
118
|
+
def _arrow3484(__unit: None=None) -> str:
|
|
119
|
+
object_arg_2: IRequiredGetter = get.Required
|
|
120
|
+
return object_arg_2.Field("name", string)
|
|
121
|
+
|
|
122
|
+
t: ArcTable = ArcTable.create(_arrow3484(), decoded_header, [])
|
|
123
|
+
enumerator: Any = get_enumerator(decoded_values)
|
|
124
|
+
try:
|
|
125
|
+
while enumerator.System_Collections_IEnumerator_MoveNext():
|
|
126
|
+
active_pattern_result: tuple[tuple[int, int], CompositeCell] = enumerator.System_Collections_Generic_IEnumerator_1_get_Current()
|
|
127
|
+
t.SetCellAt(active_pattern_result[0][0], active_pattern_result[0][1], active_pattern_result[1])
|
|
128
|
+
|
|
129
|
+
finally:
|
|
130
|
+
dispose(enumerator)
|
|
131
|
+
|
|
132
|
+
return t
|
|
133
|
+
|
|
134
|
+
|
|
135
|
+
decoder_v2deprecated: Decoder_1[ArcTable] = object(_arrow3486)
|
|
136
|
+
|
|
137
|
+
def _arrow3513(__unit: None=None) -> Decoder_1[ArcTable]:
|
|
138
|
+
value_map: Any = dict([])
|
|
139
|
+
def ctor(cell: CompositeCell) -> int:
|
|
140
|
+
return ensure_cell_hash_in_value_map(cell, value_map)
|
|
141
|
+
|
|
142
|
+
cell_decoder: Decoder_1[int] = map_1(ctor, decoder_3)
|
|
143
|
+
def ctor_1(Item: int) -> ColumnValueRefs:
|
|
144
|
+
return ColumnValueRefs(0, Item)
|
|
145
|
+
|
|
146
|
+
def ctor_2(Item_1: Any) -> ColumnValueRefs:
|
|
147
|
+
return ColumnValueRefs(1, Item_1)
|
|
148
|
+
|
|
149
|
+
column_decoder: Decoder_1[ColumnValueRefs] = Decode_tryOneOf(of_array([map_1(ctor_1, cell_decoder), map_1(ctor_2, Decode_intDictionary(cell_decoder))]))
|
|
150
|
+
def _arrow3501(get: IGetters) -> ArcTable:
|
|
151
|
+
def _arrow3492(__unit: None=None) -> Array[CompositeHeader] | None:
|
|
152
|
+
arg_1: Decoder_1[Array[CompositeHeader]] = resize_array(decoder_2)
|
|
153
|
+
object_arg: IOptionalGetter = get.Optional
|
|
154
|
+
return object_arg.Field("headers", arg_1)
|
|
155
|
+
|
|
156
|
+
decoded_header: Array[CompositeHeader] = default_arg(_arrow3492(), [])
|
|
157
|
+
def _arrow3495(__unit: None=None) -> Any | None:
|
|
158
|
+
arg_3: Decoder_1[Any] = Decode_dictionary(int_1, column_decoder)
|
|
159
|
+
object_arg_1: IOptionalGetter = get.Optional
|
|
160
|
+
return object_arg_1.Field("columns", arg_3)
|
|
161
|
+
|
|
162
|
+
def _arrow3496(__unit: None=None) -> int | None:
|
|
163
|
+
object_arg_2: IOptionalGetter = get.Optional
|
|
164
|
+
return object_arg_2.Field("rowCount", int_1)
|
|
165
|
+
|
|
166
|
+
values: ArcTableValues = ArcTableValues(default_arg(_arrow3495(), dict([])), value_map, default_arg(_arrow3496(), 0))
|
|
167
|
+
def _arrow3499(__unit: None=None) -> str:
|
|
168
|
+
object_arg_3: IRequiredGetter = get.Required
|
|
169
|
+
return object_arg_3.Field("name", string)
|
|
170
|
+
|
|
171
|
+
return ArcTable.from_arc_table_values(_arrow3499(), decoded_header, values)
|
|
172
|
+
|
|
173
|
+
decoder_1: Decoder_1[ArcTable] = object(_arrow3501)
|
|
174
|
+
class ObjectExpr3510(Decoder_1[ArcTable]):
|
|
175
|
+
def Decode(self, helper: IDecoderHelpers_1[Any], column: Any) -> FSharpResult_2[ArcTable, tuple[str, ErrorReason_1[__A_]]]:
|
|
176
|
+
return decoder_v2deprecated.Decode(helper, column) if helper.has_property("values", column) else decoder_1.Decode(helper, column)
|
|
177
|
+
|
|
178
|
+
return ObjectExpr3510()
|
|
179
|
+
|
|
180
|
+
|
|
181
|
+
decoder: Decoder_1[ArcTable] = _arrow3513()
|
|
182
|
+
|
|
183
|
+
def decoder_compressed_column(cell_table: Array[CompositeCell], table: ArcTable, column_index: int) -> Decoder_1[None]:
|
|
184
|
+
class ObjectExpr3520(Decoder_1[None]):
|
|
185
|
+
def Decode(self, helper: IDecoderHelpers_1[Any], column: Any, cell_table: Any=cell_table, table: Any=table, column_index: Any=column_index) -> FSharpResult_2[None, tuple[str, ErrorReason_1[__A_]]]:
|
|
186
|
+
match_value: FSharpResult_2[Array[CompositeCell], tuple[str, ErrorReason_1[__A_]]] = array_1(decode_cell(cell_table)).Decode(helper, column)
|
|
187
|
+
if match_value.tag == 1:
|
|
188
|
+
def _arrow3518(get: IGetters) -> None:
|
|
189
|
+
from_: int
|
|
190
|
+
object_arg: IRequiredGetter = get.Required
|
|
191
|
+
from_ = object_arg.Field("f", int_1)
|
|
192
|
+
to_: int
|
|
193
|
+
object_arg_1: IRequiredGetter = get.Required
|
|
194
|
+
to_ = object_arg_1.Field("t", int_1)
|
|
195
|
+
value: CompositeCell
|
|
196
|
+
arg_5: Decoder_1[CompositeCell] = decode_cell(cell_table)
|
|
197
|
+
object_arg_2: IRequiredGetter = get.Required
|
|
198
|
+
value = object_arg_2.Field("v", arg_5)
|
|
199
|
+
for i in range(from_, to_ + 1, 1):
|
|
200
|
+
Unchecked_setCellAt(column_index, i, value, table.Values)
|
|
201
|
+
|
|
202
|
+
range_decoder: Decoder_1[None] = object(_arrow3518)
|
|
203
|
+
match_value_1: FSharpResult_2[Array[None], tuple[str, ErrorReason_1[__A_]]] = array_1(range_decoder).Decode(helper, column)
|
|
204
|
+
return FSharpResult_2(1, match_value_1.fields[0]) if (match_value_1.tag == 1) else FSharpResult_2(0, None)
|
|
205
|
+
|
|
206
|
+
else:
|
|
207
|
+
def action(r: int, cell: CompositeCell) -> None:
|
|
208
|
+
Unchecked_setCellAt(column_index, r, cell, table.Values)
|
|
209
|
+
|
|
210
|
+
iterate_indexed(action, match_value.fields[0])
|
|
211
|
+
return FSharpResult_2(0, None)
|
|
212
|
+
|
|
213
|
+
|
|
214
|
+
return ObjectExpr3520()
|
|
215
|
+
|
|
216
|
+
|
|
217
|
+
def arrayi(decoderi: Callable[[int], Decoder_1[_VALUE]]) -> Decoder_1[Array[Any]]:
|
|
218
|
+
class ObjectExpr3529(Decoder_1[Array[_VALUE_]]):
|
|
219
|
+
def Decode(self, helpers: IDecoderHelpers_1[Any], value: Any, decoderi: Any=decoderi) -> FSharpResult_2[Array[_VALUE_], tuple[str, ErrorReason_1[__A_]]]:
|
|
220
|
+
if helpers.is_array(value):
|
|
221
|
+
i: int = -1
|
|
222
|
+
tokens: Array[__A_] = helpers.as_array(value)
|
|
223
|
+
def folder(acc: FSharpResult_2[Array[_VALUE_], tuple[str, ErrorReason_1[__A_]]], value_1: __A_) -> FSharpResult_2[Array[_VALUE_], tuple[str, ErrorReason_1[__A_]]]:
|
|
224
|
+
nonlocal i
|
|
225
|
+
i = (i + 1) or 0
|
|
226
|
+
if acc.tag == 0:
|
|
227
|
+
acc_1: Array[_VALUE_] = acc.fields[0]
|
|
228
|
+
match_value: FSharpResult_2[_VALUE_, tuple[str, ErrorReason_1[__A_]]] = decoderi(i).Decode(helpers, value_1)
|
|
229
|
+
if match_value.tag == 0:
|
|
230
|
+
acc_1[i] = match_value.fields[0]
|
|
231
|
+
return FSharpResult_2(0, acc_1)
|
|
232
|
+
|
|
233
|
+
else:
|
|
234
|
+
def _arrow3527(__unit: None=None, acc: Any=acc, value_1: Any=value_1) -> tuple[str, ErrorReason_1[__A_]]:
|
|
235
|
+
tupled_arg: tuple[str, ErrorReason_1[__A_]] = match_value.fields[0]
|
|
236
|
+
return Helpers_prependPath((".[" + int32_to_string(i)) + "]", tupled_arg[0], tupled_arg[1])
|
|
237
|
+
|
|
238
|
+
return FSharpResult_2(1, _arrow3527())
|
|
239
|
+
|
|
240
|
+
|
|
241
|
+
else:
|
|
242
|
+
return acc
|
|
243
|
+
|
|
244
|
+
|
|
245
|
+
return fold(folder, FSharpResult_2(0, fill([0] * len(tokens), 0, len(tokens), None)), tokens)
|
|
246
|
+
|
|
247
|
+
else:
|
|
248
|
+
return FSharpResult_2(1, ("", ErrorReason_1(0, "an array", value)))
|
|
249
|
+
|
|
250
|
+
|
|
251
|
+
return ObjectExpr3529()
|
|
252
|
+
|
|
253
|
+
|
|
254
|
+
def encoder_compressed(string_table: Any, oa_table: Any, cell_table: Any, table: ArcTable) -> IEncodable:
|
|
255
|
+
def cell_encoder(hash_1: int, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, table: Any=table) -> IEncodable:
|
|
256
|
+
return encode_cell(cell_table, get_item_from_dict(table.Values.ValueMap, hash_1))
|
|
257
|
+
|
|
258
|
+
def _arrow3540(__unit: None=None, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, table: Any=table) -> IEnumerable_1[tuple[str, IEncodable]]:
|
|
259
|
+
def _arrow3539(__unit: None=None) -> IEnumerable_1[tuple[str, IEncodable]]:
|
|
260
|
+
def _arrow3534(__unit: None=None) -> IEnumerable_1[IEncodable]:
|
|
261
|
+
return map(encoder_2, table.Headers)
|
|
262
|
+
|
|
263
|
+
def _arrow3538(__unit: None=None) -> IEnumerable_1[tuple[str, IEncodable]]:
|
|
264
|
+
def column_encoder(col: ColumnValueRefs) -> IEncodable:
|
|
265
|
+
if col.tag == 1:
|
|
266
|
+
return int_dictionary(cell_encoder, col.fields[0])
|
|
267
|
+
|
|
268
|
+
else:
|
|
269
|
+
return cell_encoder(col.fields[0])
|
|
270
|
+
|
|
271
|
+
|
|
272
|
+
def _arrow3537(__unit: None=None) -> IEnumerable_1[tuple[str, IEncodable]]:
|
|
273
|
+
def _arrow3536(__unit: None=None) -> IEncodable:
|
|
274
|
+
value: int = table.RowCount or 0
|
|
275
|
+
class ObjectExpr3535(IEncodable):
|
|
276
|
+
def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
|
|
277
|
+
return helpers.encode_signed_integral_number(value)
|
|
278
|
+
|
|
279
|
+
return ObjectExpr3535()
|
|
280
|
+
|
|
281
|
+
return singleton(("r", _arrow3536()))
|
|
282
|
+
|
|
283
|
+
return append(singleton(("c", int_dictionary(column_encoder, table.Values.Columns))), delay(_arrow3537)) if (table.Values.RowCount != 0) else empty()
|
|
284
|
+
|
|
285
|
+
return append(singleton(("h", list_1(to_list(delay(_arrow3534))))) if (len(table.Headers) != 0) else empty(), delay(_arrow3538))
|
|
286
|
+
|
|
287
|
+
return append(singleton(("n", encode_string(string_table, table.Name))), delay(_arrow3539))
|
|
288
|
+
|
|
289
|
+
values: IEnumerable_1[tuple[str, IEncodable]] = to_list(delay(_arrow3540))
|
|
290
|
+
class ObjectExpr3542(IEncodable):
|
|
291
|
+
def Encode(self, helpers_1: IEncoderHelpers_1[Any], string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table, table: Any=table) -> Any:
|
|
292
|
+
def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
|
|
293
|
+
return (tupled_arg[0], tupled_arg[1].Encode(helpers_1))
|
|
294
|
+
|
|
295
|
+
arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
|
|
296
|
+
return helpers_1.encode_object(arg)
|
|
297
|
+
|
|
298
|
+
return ObjectExpr3542()
|
|
299
|
+
|
|
300
|
+
|
|
301
|
+
def decoder_compressed_v2deprecated(string_table: Array[str], oa_table: Array[OntologyAnnotation], cell_table: Array[CompositeCell]) -> Decoder_1[ArcTable]:
|
|
302
|
+
def _arrow3547(get: IGetters, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table) -> ArcTable:
|
|
303
|
+
def _arrow3543(__unit: None=None) -> FSharpList[CompositeHeader] | None:
|
|
304
|
+
arg_1: Decoder_1[FSharpList[CompositeHeader]] = list_1_1(decoder_2)
|
|
305
|
+
object_arg: IOptionalGetter = get.Optional
|
|
306
|
+
return object_arg.Field("h", arg_1)
|
|
307
|
+
|
|
308
|
+
decoded_header: Array[CompositeHeader] = list(default_arg(_arrow3543(), empty_1()))
|
|
309
|
+
def _arrow3544(__unit: None=None) -> str:
|
|
310
|
+
arg_3: Decoder_1[str] = decode_string(string_table)
|
|
311
|
+
object_arg_1: IRequiredGetter = get.Required
|
|
312
|
+
return object_arg_1.Field("n", arg_3)
|
|
313
|
+
|
|
314
|
+
table: ArcTable = ArcTable.create(_arrow3544(), decoded_header, [])
|
|
315
|
+
def _arrow3546(__unit: None=None) -> Array[None] | None:
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def _arrow3545(column_index: int) -> Decoder_1[None]:
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return decoder_compressed_column(cell_table, table, column_index)
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318
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+
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319
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+
arg_5: Decoder_1[Array[None]] = arrayi(_arrow3545)
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object_arg_2: IOptionalGetter = get.Optional
|
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return object_arg_2.Field("c", arg_5)
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ignore(_arrow3546())
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return table
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325
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return object(_arrow3547)
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327
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328
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329
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def decoder_compressed(string_table: Array[str], oa_table: Array[OntologyAnnotation], cell_table: Array[CompositeCell]) -> Decoder_1[ArcTable]:
|
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330
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+
value_map: Any = dict([])
|
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331
|
+
def ctor(i: int, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table) -> int:
|
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332
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+
return ensure_cell_hash_in_value_map(cell_table[i], value_map)
|
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333
|
+
|
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334
|
+
cell_decoder: Decoder_1[int] = map_1(ctor, int_1)
|
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335
|
+
def ctor_1(Item: int, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table) -> ColumnValueRefs:
|
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336
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+
return ColumnValueRefs(0, Item)
|
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337
|
+
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338
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+
def ctor_2(Item_1: Any, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table) -> ColumnValueRefs:
|
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339
|
+
return ColumnValueRefs(1, Item_1)
|
|
340
|
+
|
|
341
|
+
column_decoder: Decoder_1[ColumnValueRefs] = Decode_tryOneOf(of_array([map_1(ctor_1, cell_decoder), map_1(ctor_2, Decode_intDictionary(cell_decoder))]))
|
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342
|
+
def _arrow3552(get: IGetters, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table) -> ArcTable:
|
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343
|
+
def _arrow3548(__unit: None=None) -> Array[CompositeHeader] | None:
|
|
344
|
+
arg_1: Decoder_1[Array[CompositeHeader]] = resize_array(decoder_2)
|
|
345
|
+
object_arg: IOptionalGetter = get.Optional
|
|
346
|
+
return object_arg.Field("h", arg_1)
|
|
347
|
+
|
|
348
|
+
decoded_header: Array[CompositeHeader] = default_arg(_arrow3548(), [])
|
|
349
|
+
def _arrow3549(__unit: None=None) -> Any | None:
|
|
350
|
+
arg_3: Decoder_1[Any] = Decode_dictionary(int_1, column_decoder)
|
|
351
|
+
object_arg_1: IOptionalGetter = get.Optional
|
|
352
|
+
return object_arg_1.Field("c", arg_3)
|
|
353
|
+
|
|
354
|
+
def _arrow3550(__unit: None=None) -> int | None:
|
|
355
|
+
object_arg_2: IOptionalGetter = get.Optional
|
|
356
|
+
return object_arg_2.Field("r", int_1)
|
|
357
|
+
|
|
358
|
+
values: ArcTableValues = ArcTableValues(default_arg(_arrow3549(), dict([])), value_map, default_arg(_arrow3550(), 0))
|
|
359
|
+
def _arrow3551(__unit: None=None) -> str:
|
|
360
|
+
arg_7: Decoder_1[str] = decode_string(string_table)
|
|
361
|
+
object_arg_3: IRequiredGetter = get.Required
|
|
362
|
+
return object_arg_3.Field("n", arg_7)
|
|
363
|
+
|
|
364
|
+
return ArcTable.from_arc_table_values(_arrow3551(), decoded_header, values)
|
|
365
|
+
|
|
366
|
+
decoder_1: Decoder_1[ArcTable] = object(_arrow3552)
|
|
367
|
+
class ObjectExpr3553(Decoder_1[ArcTable]):
|
|
368
|
+
def Decode(self, helper: IDecoderHelpers_1[Any], column: Any, string_table: Any=string_table, oa_table: Any=oa_table, cell_table: Any=cell_table) -> FSharpResult_2[ArcTable, tuple[str, ErrorReason_1[__A_]]]:
|
|
369
|
+
return decoder_compressed_v2deprecated(string_table, oa_table, cell_table).Decode(helper, column) if (not helper.has_property("r", column)) else decoder_1.Decode(helper, column)
|
|
370
|
+
|
|
371
|
+
return ObjectExpr3553()
|
|
372
|
+
|
|
373
|
+
|
|
374
|
+
__all__ = ["encoder", "decoder_v2deprecated", "decoder", "decoder_compressed_column", "arrayi", "encoder_compressed", "decoder_compressed_v2deprecated", "decoder_compressed"]
|
|
375
|
+
|
|
@@ -0,0 +1,83 @@
|
|
|
1
|
+
from __future__ import annotations
|
|
2
|
+
from collections.abc import Callable
|
|
3
|
+
from typing import (Any, TypeVar)
|
|
4
|
+
from ...fable_modules.fable_library.array_ import map as map_1
|
|
5
|
+
from ...fable_modules.fable_library.map_util import add_to_dict
|
|
6
|
+
from ...fable_modules.fable_library.seq import (to_array, map, sort_by)
|
|
7
|
+
from ...fable_modules.fable_library.types import Array
|
|
8
|
+
from ...fable_modules.fable_library.util import compare_primitives
|
|
9
|
+
from ...fable_modules.thoth_json_core.decode import (array as array_2, object, int_1, IGetters)
|
|
10
|
+
from ...fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1, Decoder_1)
|
|
11
|
+
from ...Core.Helper.collections_ import (Dictionary_items, Dictionary_tryFind)
|
|
12
|
+
from ...Core.ontology_annotation import OntologyAnnotation
|
|
13
|
+
from ...Core.Table.composite_cell import CompositeCell
|
|
14
|
+
from .composite_cell import (encoder_compressed, decoder_compressed)
|
|
15
|
+
|
|
16
|
+
__A_ = TypeVar("__A_")
|
|
17
|
+
|
|
18
|
+
def array_from_map(otm: Any) -> Array[CompositeCell]:
|
|
19
|
+
def mapping(kv_1: Any, otm: Any=otm) -> CompositeCell:
|
|
20
|
+
return kv_1[0]
|
|
21
|
+
|
|
22
|
+
def projection(kv: Any, otm: Any=otm) -> int:
|
|
23
|
+
return kv[1]
|
|
24
|
+
|
|
25
|
+
class ObjectExpr3432:
|
|
26
|
+
@property
|
|
27
|
+
def Compare(self) -> Callable[[int, int], int]:
|
|
28
|
+
return compare_primitives
|
|
29
|
+
|
|
30
|
+
return to_array(map(mapping, sort_by(projection, Dictionary_items(otm), ObjectExpr3432())))
|
|
31
|
+
|
|
32
|
+
|
|
33
|
+
def encoder(string_table: Any, oa_table: Any, ot: Array[CompositeCell]) -> IEncodable:
|
|
34
|
+
def mapping(cc: CompositeCell, string_table: Any=string_table, oa_table: Any=oa_table, ot: Any=ot) -> IEncodable:
|
|
35
|
+
return encoder_compressed(string_table, oa_table, cc)
|
|
36
|
+
|
|
37
|
+
values: Array[IEncodable] = map_1(mapping, ot, None)
|
|
38
|
+
class ObjectExpr3433(IEncodable):
|
|
39
|
+
def Encode(self, helpers: IEncoderHelpers_1[Any], string_table: Any=string_table, oa_table: Any=oa_table, ot: Any=ot) -> Any:
|
|
40
|
+
def mapping_1(v: IEncodable) -> __A_:
|
|
41
|
+
return v.Encode(helpers)
|
|
42
|
+
|
|
43
|
+
arg: Array[__A_] = map_1(mapping_1, values, None)
|
|
44
|
+
return helpers.encode_array(arg)
|
|
45
|
+
|
|
46
|
+
return ObjectExpr3433()
|
|
47
|
+
|
|
48
|
+
|
|
49
|
+
def decoder(string_table: Array[str], oa_table: Array[OntologyAnnotation]) -> Decoder_1[Array[CompositeCell]]:
|
|
50
|
+
return array_2(decoder_compressed(string_table, oa_table))
|
|
51
|
+
|
|
52
|
+
|
|
53
|
+
def encode_cell(otm: Any, cc: CompositeCell) -> IEncodable:
|
|
54
|
+
match_value: int | None = Dictionary_tryFind(cc, otm)
|
|
55
|
+
if match_value is None:
|
|
56
|
+
i_1: int = len(otm) or 0
|
|
57
|
+
add_to_dict(otm, cc, i_1)
|
|
58
|
+
class ObjectExpr3434(IEncodable):
|
|
59
|
+
def Encode(self, helpers_1: IEncoderHelpers_1[Any], otm: Any=otm, cc: Any=cc) -> Any:
|
|
60
|
+
return helpers_1.encode_signed_integral_number(i_1)
|
|
61
|
+
|
|
62
|
+
return ObjectExpr3434()
|
|
63
|
+
|
|
64
|
+
else:
|
|
65
|
+
i: int = match_value or 0
|
|
66
|
+
class ObjectExpr3435(IEncodable):
|
|
67
|
+
def Encode(self, helpers: IEncoderHelpers_1[Any], otm: Any=otm, cc: Any=cc) -> Any:
|
|
68
|
+
return helpers.encode_signed_integral_number(i)
|
|
69
|
+
|
|
70
|
+
return ObjectExpr3435()
|
|
71
|
+
|
|
72
|
+
|
|
73
|
+
|
|
74
|
+
def decode_cell(ot: Array[CompositeCell]) -> Decoder_1[CompositeCell]:
|
|
75
|
+
def _arrow3436(get: IGetters, ot: Any=ot) -> CompositeCell:
|
|
76
|
+
i: int = get.Required.Raw(int_1) or 0
|
|
77
|
+
return ot[i].Copy()
|
|
78
|
+
|
|
79
|
+
return object(_arrow3436)
|
|
80
|
+
|
|
81
|
+
|
|
82
|
+
__all__ = ["array_from_map", "encoder", "decoder", "encode_cell", "decode_cell"]
|
|
83
|
+
|