arctrl 3.0.0__py3-none-any.whl

arctrl/py/Json/context/rocrate/isa_person_context.py

@@ -0,0 +1,131 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr2404() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.Person.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Person", string_type), ("first_name", string_type), ("last_name", string_type), ("mid_initials", string_type), ("email", string_type), ("address", string_type), ("phone", string_type), ("fax", string_type), ("comments", string_type), ("roles", string_type), ("affiliation", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    Person: str
+    first_name: str
+    last_name: str
+    mid_initials: str
+    email: str
+    address: str
+    phone: str
+    fax: str
+    comments: str
+    roles: str
+    affiliation: str
+
+IContext_reflection = _expr2404
+
+def _arrow2419(__unit: None=None) -> IEncodable:
+    class ObjectExpr2405(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr2406(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("sdo:Person")
+
+    class ObjectExpr2407(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("sdo:identifier")
+
+    class ObjectExpr2408(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("sdo:givenName")
+
+    class ObjectExpr2409(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("sdo:familyName")
+
+    class ObjectExpr2410(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_5.encode_string("sdo:additionalName")
+
+    class ObjectExpr2411(IEncodable):
+        def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_6.encode_string("sdo:email")
+
+    class ObjectExpr2412(IEncodable):
+        def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_7.encode_string("sdo:address")
+
+    class ObjectExpr2413(IEncodable):
+        def Encode(self, helpers_8: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_8.encode_string("sdo:telephone")
+
+    class ObjectExpr2414(IEncodable):
+        def Encode(self, helpers_9: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_9.encode_string("sdo:faxNumber")
+
+    class ObjectExpr2415(IEncodable):
+        def Encode(self, helpers_10: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_10.encode_string("sdo:disambiguatingDescription")
+
+    class ObjectExpr2416(IEncodable):
+        def Encode(self, helpers_11: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_11.encode_string("sdo:jobTitle")
+
+    class ObjectExpr2417(IEncodable):
+        def Encode(self, helpers_12: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_12.encode_string("sdo:affiliation")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr2405()), ("Person", ObjectExpr2406()), ("orcid", ObjectExpr2407()), ("firstName", ObjectExpr2408()), ("lastName", ObjectExpr2409()), ("midInitials", ObjectExpr2410()), ("email", ObjectExpr2411()), ("address", ObjectExpr2412()), ("phone", ObjectExpr2413()), ("fax", ObjectExpr2414()), ("comments", ObjectExpr2415()), ("roles", ObjectExpr2416()), ("affiliation", ObjectExpr2417())])
+    class ObjectExpr2418(IEncodable):
+        def Encode(self, helpers_13: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_13))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_13.encode_object(arg)
+
+    return ObjectExpr2418()
+
+
+context_jsonvalue: IEncodable = _arrow2419()
+
+def _arrow2424(__unit: None=None) -> IEncodable:
+    class ObjectExpr2420(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr2421(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("sdo:Person")
+
+    class ObjectExpr2422(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("sdo:name")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr2420()), ("Person", ObjectExpr2421()), ("name", ObjectExpr2422())])
+    class ObjectExpr2423(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_3))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_3.encode_object(arg)
+
+    return ObjectExpr2423()
+
+
+context_minimal_json_value: IEncodable = _arrow2424()
+
+context_str: str = "\r\n{\r\n  \"@context\": {\r\n    \"sdo\": \"http://schema.org/\",\r\n    \"arc\": \"http://purl.org/nfdi4plants/ontology/\",\r\n\r\n    \"Person\": \"sdo:Person\",\r\n    \"firstName\": \"sdo:givenName\",\r\n    \"lastName\": \"sdo:familyName\",\r\n    \"midInitials\": \"sdo:additionalName\",\r\n    \"email\": \"sdo:email\",\r\n    \"address\": \"sdo:address\",\r\n    \"phone\": \"sdo:telephone\",\r\n    \"fax\": \"sdo:faxNumber\",\r\n    \"comments\": \"sdo:disambiguatingDescription\",\r\n    \"roles\": \"sdo:jobTitle\",\r\n    \"affiliation\": \"sdo:affiliation\"\r\n  }\r\n}\r\n    "
+
+__all__ = ["IContext_reflection", "context_jsonvalue", "context_minimal_json_value", "context_str"]
+

arctrl/py/Json/context/rocrate/isa_process_context.py

@@ -0,0 +1,94 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr2425() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.Process.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Process", string_type), ("ArcProcess", string_type), ("name", string_type), ("executes_protocol", string_type), ("performer", string_type), ("date", string_type), ("previous_process", string_type), ("next_process", string_type), ("input", string_type), ("output", string_type), ("comments", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    Process: str
+    ArcProcess: str
+    name: str
+    executes_protocol: str
+    performer: str
+    date: str
+    previous_process: str
+    next_process: str
+    input: str
+    output: str
+    comments: str
+
+IContext_reflection = _expr2425
+
+def _arrow2438(__unit: None=None) -> IEncodable:
+    class ObjectExpr2426(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr2427(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("https://bioschemas.org/")
+
+    class ObjectExpr2428(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("bio:LabProcess")
+
+    class ObjectExpr2429(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("sdo:name")
+
+    class ObjectExpr2430(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("bio:executesLabProtocol")
+
+    class ObjectExpr2431(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_5.encode_string("bio:parameterValue")
+
+    class ObjectExpr2432(IEncodable):
+        def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_6.encode_string("sdo:agent")
+
+    class ObjectExpr2433(IEncodable):
+        def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_7.encode_string("sdo:endTime")
+
+    class ObjectExpr2434(IEncodable):
+        def Encode(self, helpers_8: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_8.encode_string("sdo:object")
+
+    class ObjectExpr2435(IEncodable):
+        def Encode(self, helpers_9: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_9.encode_string("sdo:result")
+
+    class ObjectExpr2436(IEncodable):
+        def Encode(self, helpers_10: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_10.encode_string("sdo:disambiguatingDescription")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr2426()), ("bio", ObjectExpr2427()), ("Process", ObjectExpr2428()), ("name", ObjectExpr2429()), ("executesProtocol", ObjectExpr2430()), ("parameterValues", ObjectExpr2431()), ("performer", ObjectExpr2432()), ("date", ObjectExpr2433()), ("inputs", ObjectExpr2434()), ("outputs", ObjectExpr2435()), ("comments", ObjectExpr2436())])
+    class ObjectExpr2437(IEncodable):
+        def Encode(self, helpers_11: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_11))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_11.encode_object(arg)
+
+    return ObjectExpr2437()
+
+
+context_jsonvalue: IEncodable = _arrow2438()
+
+__all__ = ["IContext_reflection", "context_jsonvalue"]
+

arctrl/py/Json/context/rocrate/isa_process_parameter_value_context.py

@@ -0,0 +1,80 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr2439() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.ProcessParameterValue.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("ProcessParameterValue", string_type), ("ArcProcessParameterValue", string_type), ("category", string_type), ("value", string_type), ("unit", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    ProcessParameterValue: str
+    ArcProcessParameterValue: str
+    category: str
+    value: str
+    unit: str
+
+IContext_reflection = _expr2439
+
+def _arrow2450(__unit: None=None) -> IEncodable:
+    class ObjectExpr2440(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr2441(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("sdo:additionalType")
+
+    class ObjectExpr2442(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("sdo:PropertyValue")
+
+    class ObjectExpr2443(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("sdo:name")
+
+    class ObjectExpr2444(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("sdo:propertyID")
+
+    class ObjectExpr2445(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_5.encode_string("sdo:value")
+
+    class ObjectExpr2446(IEncodable):
+        def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_6.encode_string("sdo:valueReference")
+
+    class ObjectExpr2447(IEncodable):
+        def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_7.encode_string("sdo:unitText")
+
+    class ObjectExpr2448(IEncodable):
+        def Encode(self, helpers_8: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_8.encode_string("sdo:unitCode")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr2440()), ("additionalType", ObjectExpr2441()), ("ProcessParameterValue", ObjectExpr2442()), ("category", ObjectExpr2443()), ("categoryCode", ObjectExpr2444()), ("value", ObjectExpr2445()), ("valueCode", ObjectExpr2446()), ("unit", ObjectExpr2447()), ("unitCode", ObjectExpr2448())])
+    class ObjectExpr2449(IEncodable):
+        def Encode(self, helpers_9: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_9))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_9.encode_object(arg)
+
+    return ObjectExpr2449()
+
+
+context_jsonvalue: IEncodable = _arrow2450()
+
+__all__ = ["IContext_reflection", "context_jsonvalue"]
+

arctrl/py/Json/context/rocrate/isa_protocol_context.py

@@ -0,0 +1,97 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr2451() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.Protocol.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Protocol", string_type), ("ArcProtocol", string_type), ("name", string_type), ("protocol_type", string_type), ("description", string_type), ("version", string_type), ("components", string_type), ("parameters", string_type), ("uri", string_type), ("comments", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    Protocol: str
+    ArcProtocol: str
+    name: str
+    protocol_type: str
+    description: str
+    version: str
+    components: str
+    parameters: str
+    uri: str
+    comments: str
+
+IContext_reflection = _expr2451
+
+def _arrow2465(__unit: None=None) -> IEncodable:
+    class ObjectExpr2452(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr2453(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("https://bioschemas.org/")
+
+    class ObjectExpr2454(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("bio:LabProtocol")
+
+    class ObjectExpr2455(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("sdo:name")
+
+    class ObjectExpr2456(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("bio:intendedUse")
+
+    class ObjectExpr2457(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_5.encode_string("sdo:description")
+
+    class ObjectExpr2458(IEncodable):
+        def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_6.encode_string("sdo:version")
+
+    class ObjectExpr2459(IEncodable):
+        def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_7.encode_string("bio:labEquipment")
+
+    class ObjectExpr2460(IEncodable):
+        def Encode(self, helpers_8: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_8.encode_string("bio:reagent")
+
+    class ObjectExpr2461(IEncodable):
+        def Encode(self, helpers_9: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_9.encode_string("bio:computationalTool")
+
+    class ObjectExpr2462(IEncodable):
+        def Encode(self, helpers_10: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_10.encode_string("sdo:url")
+
+    class ObjectExpr2463(IEncodable):
+        def Encode(self, helpers_11: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_11.encode_string("sdo:comment")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr2452()), ("bio", ObjectExpr2453()), ("Protocol", ObjectExpr2454()), ("name", ObjectExpr2455()), ("protocolType", ObjectExpr2456()), ("description", ObjectExpr2457()), ("version", ObjectExpr2458()), ("components", ObjectExpr2459()), ("reagents", ObjectExpr2460()), ("computationalTools", ObjectExpr2461()), ("uri", ObjectExpr2462()), ("comments", ObjectExpr2463())])
+    class ObjectExpr2464(IEncodable):
+        def Encode(self, helpers_12: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_12))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_12.encode_object(arg)
+
+    return ObjectExpr2464()
+
+
+context_jsonvalue: IEncodable = _arrow2465()
+
+__all__ = ["IContext_reflection", "context_jsonvalue"]
+

arctrl/py/Json/context/rocrate/isa_protocol_parameter_context.py

@@ -0,0 +1,64 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr2466() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.ProtocolParameter.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("ProtocolParamter", string_type), ("ArcProtocolParameter", string_type), ("parameter_name", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    ProtocolParamter: str
+    ArcProtocolParameter: str
+    parameter_name: str
+
+IContext_reflection = _expr2466
+
+def _arrow2473(__unit: None=None) -> IEncodable:
+    class ObjectExpr2467(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr2468(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("http://purl.org/nfdi4plants/ontology/")
+
+    class ObjectExpr2469(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("sdo:Thing")
+
+    class ObjectExpr2470(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("arc:ARC#ARC_00000063")
+
+    class ObjectExpr2471(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("arc:ARC#ARC_00000100")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr2467()), ("arc", ObjectExpr2468()), ("ProtocolParameter", ObjectExpr2469()), ("ArcProtocolParameter", ObjectExpr2470()), ("parameterName", ObjectExpr2471())])
+    class ObjectExpr2472(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_5))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_5.encode_object(arg)
+
+    return ObjectExpr2472()
+
+
+context_jsonvalue: IEncodable = _arrow2473()
+
+context_str: str = "\r\n{\r\n  \"@context\": {\r\n    \"sdo\": \"http://schema.org/\",\r\n    \"arc\": \"http://purl.org/nfdi4plants/ontology/\",\r\n\r\n    \"ProtocolParameter\": \"sdo:Thing\",\r\n    \"ArcProtocolParameter\": \"arc:ARC#ARC_00000063\",\r\n\r\n    \"parameterName\": \"arc:ARC#ARC_00000100\"\r\n  }\r\n}\r\n    "
+
+__all__ = ["IContext_reflection", "context_jsonvalue", "context_str"]
+

arctrl/py/Json/context/rocrate/isa_publication_context.py

@@ -0,0 +1,78 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr2474() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.Publication.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Publication", string_type), ("pub_med_id", string_type), ("doi", string_type), ("title", string_type), ("status", string_type), ("author_list", string_type), ("comments", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    Publication: str
+    pub_med_id: str
+    doi: str
+    title: str
+    status: str
+    author_list: str
+    comments: str
+
+IContext_reflection = _expr2474
+
+def _arrow2484(__unit: None=None) -> IEncodable:
+    class ObjectExpr2475(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr2476(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("sdo:ScholarlyArticle")
+
+    class ObjectExpr2477(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("sdo:url")
+
+    class ObjectExpr2478(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("sdo:sameAs")
+
+    class ObjectExpr2479(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("sdo:headline")
+
+    class ObjectExpr2480(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_5.encode_string("sdo:creativeWorkStatus")
+
+    class ObjectExpr2481(IEncodable):
+        def Encode(self, helpers_6: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_6.encode_string("sdo:author")
+
+    class ObjectExpr2482(IEncodable):
+        def Encode(self, helpers_7: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_7.encode_string("sdo:disambiguatingDescription")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr2475()), ("Publication", ObjectExpr2476()), ("pubMedID", ObjectExpr2477()), ("doi", ObjectExpr2478()), ("title", ObjectExpr2479()), ("status", ObjectExpr2480()), ("authorList", ObjectExpr2481()), ("comments", ObjectExpr2482())])
+    class ObjectExpr2483(IEncodable):
+        def Encode(self, helpers_8: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_8))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_8.encode_object(arg)
+
+    return ObjectExpr2483()
+
+
+context_jsonvalue: IEncodable = _arrow2484()
+
+__all__ = ["IContext_reflection", "context_jsonvalue"]
+

arctrl/py/Json/context/rocrate/isa_sample_context.py

@@ -0,0 +1,65 @@
+from __future__ import annotations
+from dataclasses import dataclass
+from typing import (Any, TypeVar)
+from ....fable_modules.fable_library.reflection import (TypeInfo, string_type, record_type)
+from ....fable_modules.fable_library.seq import map
+from ....fable_modules.fable_library.types import Record
+from ....fable_modules.fable_library.util import (to_enumerable, IEnumerable_1)
+from ....fable_modules.thoth_json_core.types import (IEncodable, IEncoderHelpers_1)
+
+__A_ = TypeVar("__A_")
+
+def _expr2485() -> TypeInfo:
+    return record_type("ARCtrl.Json.ROCrateContext.Sample.IContext", [], IContext, lambda: [("sdo", string_type), ("arc", string_type), ("Sample", string_type), ("ArcSample", string_type), ("name", string_type), ("characteristics", string_type), ("factor_values", string_type), ("derives_from", string_type)])
+
+
+@dataclass(eq = False, repr = False, slots = True)
+class IContext(Record):
+    sdo: str
+    arc: str
+    Sample: str
+    ArcSample: str
+    name: str
+    characteristics: str
+    factor_values: str
+    derives_from: str
+
+IContext_reflection = _expr2485
+
+def _arrow2492(__unit: None=None) -> IEncodable:
+    class ObjectExpr2486(IEncodable):
+        def Encode(self, helpers: IEncoderHelpers_1[Any]) -> Any:
+            return helpers.encode_string("http://schema.org/")
+
+    class ObjectExpr2487(IEncodable):
+        def Encode(self, helpers_1: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_1.encode_string("https://bioschemas.org/")
+
+    class ObjectExpr2488(IEncodable):
+        def Encode(self, helpers_2: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_2.encode_string("bio:Sample")
+
+    class ObjectExpr2489(IEncodable):
+        def Encode(self, helpers_3: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_3.encode_string("sdo:name")
+
+    class ObjectExpr2490(IEncodable):
+        def Encode(self, helpers_4: IEncoderHelpers_1[Any]) -> Any:
+            return helpers_4.encode_string("bio:additionalProperty")
+
+    values: IEnumerable_1[tuple[str, IEncodable]] = to_enumerable([("sdo", ObjectExpr2486()), ("bio", ObjectExpr2487()), ("Sample", ObjectExpr2488()), ("name", ObjectExpr2489()), ("additionalProperties", ObjectExpr2490())])
+    class ObjectExpr2491(IEncodable):
+        def Encode(self, helpers_5: IEncoderHelpers_1[Any]) -> Any:
+            def mapping(tupled_arg: tuple[str, IEncodable]) -> tuple[str, __A_]:
+                return (tupled_arg[0], tupled_arg[1].Encode(helpers_5))
+
+            arg: IEnumerable_1[tuple[str, __A_]] = map(mapping, values)
+            return helpers_5.encode_object(arg)
+
+    return ObjectExpr2491()
+
+
+context_jsonvalue: IEncodable = _arrow2492()
+
+__all__ = ["IContext_reflection", "context_jsonvalue"]
+