mednotes-opencode 0.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (430) hide show
  1. package/.opencode/agents/med-chat-triager.md +204 -0
  2. package/.opencode/agents/med-flashcard-maker.md +63 -0
  3. package/.opencode/agents/med-knowledge-architect.md +230 -0
  4. package/.opencode/agents/med-link-graph-curator.md +177 -0
  5. package/.opencode/agents/med-publish-guard.md +62 -0
  6. package/.opencode/commands/flashcards.md +25 -0
  7. package/.opencode/commands/mednotes/create.md +25 -0
  8. package/.opencode/commands/mednotes/enrich.md +27 -0
  9. package/.opencode/commands/mednotes/fix-wiki.md +27 -0
  10. package/.opencode/commands/mednotes/history.md +22 -0
  11. package/.opencode/commands/mednotes/link-body.md +25 -0
  12. package/.opencode/commands/mednotes/link-related.md +27 -0
  13. package/.opencode/commands/mednotes/link.md +27 -0
  14. package/.opencode/commands/mednotes/pdf-library.md +27 -0
  15. package/.opencode/commands/mednotes/process-chats.md +23 -0
  16. package/.opencode/commands/mednotes/setup.md +21 -0
  17. package/.opencode/commands/mednotes/status.md +27 -0
  18. package/.opencode/commands/mednotes/telemetry.md +27 -0
  19. package/.opencode/commands/report.md +26 -0
  20. package/.opencode/mednotes/AGENTS.md +57 -0
  21. package/.opencode/mednotes/agents/med-chat-triager.md +197 -0
  22. package/.opencode/mednotes/agents/med-flashcard-maker.md +56 -0
  23. package/.opencode/mednotes/agents/med-knowledge-architect.md +224 -0
  24. package/.opencode/mednotes/agents/med-link-graph-curator.md +171 -0
  25. package/.opencode/mednotes/agents/med-publish-guard.md +55 -0
  26. package/.opencode/mednotes/contracts/.gitkeep +1 -0
  27. package/.opencode/mednotes/contracts/agents.json +116 -0
  28. package/.opencode/mednotes/contracts/opencode-plugin.json +70 -0
  29. package/.opencode/mednotes/docs/agent-prompt-hardening.md +567 -0
  30. package/.opencode/mednotes/docs/agent-role-contracts.md +94 -0
  31. package/.opencode/mednotes/docs/anki-mcp-twenty-rules.md +214 -0
  32. package/.opencode/mednotes/docs/anki-templates/README.md +39 -0
  33. package/.opencode/mednotes/docs/anki-templates/cloze.back.html +23 -0
  34. package/.opencode/mednotes/docs/anki-templates/cloze.front.html +14 -0
  35. package/.opencode/mednotes/docs/anki-templates/qa.back.html +24 -0
  36. package/.opencode/mednotes/docs/anki-templates/qa.front.html +14 -0
  37. package/.opencode/mednotes/docs/anki-templates/style.css +182 -0
  38. package/.opencode/mednotes/docs/atomicity-splitting-policy.md +113 -0
  39. package/.opencode/mednotes/docs/extension-docs.md +40 -0
  40. package/.opencode/mednotes/docs/flashcard-ingestion.md +278 -0
  41. package/.opencode/mednotes/docs/knowledge-architect.md +208 -0
  42. package/.opencode/mednotes/docs/merge-policy.md +110 -0
  43. package/.opencode/mednotes/docs/public-vocabulary.md +104 -0
  44. package/.opencode/mednotes/docs/semantic-linker.md +141 -0
  45. package/.opencode/mednotes/docs/taxonomy-policy.md +90 -0
  46. package/.opencode/mednotes/docs/triage-policy.md +187 -0
  47. package/.opencode/mednotes/docs/vault-version-control.md +758 -0
  48. package/.opencode/mednotes/docs/vocabulary-db-recovery.md +58 -0
  49. package/.opencode/mednotes/docs/workflow-output-contract.md +779 -0
  50. package/.opencode/mednotes/hooks/hooks.json +79 -0
  51. package/.opencode/mednotes/package-lock.json +6361 -0
  52. package/.opencode/mednotes/package.json +15 -0
  53. package/.opencode/mednotes/pyproject.toml +48 -0
  54. package/.opencode/mednotes/scripts/bootstrap_windows_python_uv.cmd +13 -0
  55. package/.opencode/mednotes/scripts/bootstrap_windows_python_uv.ps1 +172 -0
  56. package/.opencode/mednotes/scripts/enrich_notes.py +23 -0
  57. package/.opencode/mednotes/scripts/full_reset_windows_python_uv.cmd +13 -0
  58. package/.opencode/mednotes/scripts/hooks/antigravity_hook_status.mjs +212 -0
  59. package/.opencode/mednotes/scripts/hooks/mednotes_hook/adapters/antigravity.mjs +169 -0
  60. package/.opencode/mednotes/scripts/hooks/mednotes_hook/adapters/harness_payload.mjs +103 -0
  61. package/.opencode/mednotes/scripts/hooks/mednotes_hook/adapters/opencode_plugin.mjs +341 -0
  62. package/.opencode/mednotes/scripts/hooks/mednotes_hook/adapters/opencode_user_config_sync.mjs +177 -0
  63. package/.opencode/mednotes/scripts/hooks/mednotes_hook/anki_preflight.mjs +214 -0
  64. package/.opencode/mednotes/scripts/hooks/mednotes_hook/cli.mjs +143 -0
  65. package/.opencode/mednotes/scripts/hooks/mednotes_hook/diagnostics.mjs +11 -0
  66. package/.opencode/mednotes/scripts/hooks/mednotes_hook/domain/agent_directive_core.mjs +160 -0
  67. package/.opencode/mednotes/scripts/hooks/mednotes_hook/fsm_directive.mjs +1470 -0
  68. package/.opencode/mednotes/scripts/hooks/mednotes_hook/hook_errors.mjs +120 -0
  69. package/.opencode/mednotes/scripts/hooks/mednotes_hook/retention.mjs +114 -0
  70. package/.opencode/mednotes/scripts/hooks/mednotes_hook/runtime.mjs +174 -0
  71. package/.opencode/mednotes/scripts/hooks/mednotes_hook/telemetry_capture.mjs +511 -0
  72. package/.opencode/mednotes/scripts/hooks/mednotes_hook/vault_guard.mjs +624 -0
  73. package/.opencode/mednotes/scripts/hooks/mednotes_hook.mjs +5 -0
  74. package/.opencode/mednotes/scripts/mednotes/_runtime_paths.py +24 -0
  75. package/.opencode/mednotes/scripts/mednotes/anki_model_validator.py +18 -0
  76. package/.opencode/mednotes/scripts/mednotes/capture_extension_diff.py +1562 -0
  77. package/.opencode/mednotes/scripts/mednotes/feedback_report.py +16 -0
  78. package/.opencode/mednotes/scripts/mednotes/flashcard_index.py +18 -0
  79. package/.opencode/mednotes/scripts/mednotes/flashcard_pipeline.py +18 -0
  80. package/.opencode/mednotes/scripts/mednotes/flashcard_report.py +18 -0
  81. package/.opencode/mednotes/scripts/mednotes/flashcard_sources.py +18 -0
  82. package/.opencode/mednotes/scripts/mednotes/obsidian/README.md +6 -0
  83. package/.opencode/mednotes/scripts/mednotes/obsidian_note_utils.py +20 -0
  84. package/.opencode/mednotes/scripts/mednotes/pdf_library/cli.py +16 -0
  85. package/.opencode/mednotes/scripts/mednotes/project_fsm.py +229 -0
  86. package/.opencode/mednotes/scripts/mednotes/setup_telemetry_email.py +404 -0
  87. package/.opencode/mednotes/scripts/mednotes/sync_anki_twenty_rules.py +18 -0
  88. package/.opencode/mednotes/scripts/mednotes/sync_opencode_user_config.py +36 -0
  89. package/.opencode/mednotes/scripts/mednotes/wiki/cli.py +20 -0
  90. package/.opencode/mednotes/scripts/mednotes/wiki_graph.py +18 -0
  91. package/.opencode/mednotes/scripts/mednotes/wiki_tree.py +134 -0
  92. package/.opencode/mednotes/scripts/reset_windows_python_uv.ps1 +625 -0
  93. package/.opencode/mednotes/scripts/run_python.mjs +109 -0
  94. package/.opencode/mednotes/scripts/vault/vault_commit.ps1 +19 -0
  95. package/.opencode/mednotes/scripts/vault/vault_commit.sh +18 -0
  96. package/.opencode/mednotes/scripts/vault/vault_git.ps1 +19 -0
  97. package/.opencode/mednotes/scripts/vault/vault_git.py +3107 -0
  98. package/.opencode/mednotes/scripts/vault/vault_git.sh +18 -0
  99. package/.opencode/mednotes/scripts/vault/vault_precommit.ps1 +19 -0
  100. package/.opencode/mednotes/scripts/vault/vault_precommit.sh +18 -0
  101. package/.opencode/mednotes/skills/THIRD_PARTY_NOTICES.md +45 -0
  102. package/.opencode/mednotes/skills/create-medical-flashcards/SKILL.md +113 -0
  103. package/.opencode/mednotes/skills/create-medical-note/SKILL.md +90 -0
  104. package/.opencode/mednotes/skills/enrich-medical-note/SKILL.md +120 -0
  105. package/.opencode/mednotes/skills/fix-medical-wiki/SKILL.md +559 -0
  106. package/.opencode/mednotes/skills/link-medical-wiki/SKILL.md +224 -0
  107. package/.opencode/mednotes/skills/obsidian-cli/SKILL.md +118 -0
  108. package/.opencode/mednotes/skills/obsidian-markdown/SKILL.md +207 -0
  109. package/.opencode/mednotes/skills/obsidian-markdown/references/CALLOUTS.md +58 -0
  110. package/.opencode/mednotes/skills/obsidian-markdown/references/EMBEDS.md +63 -0
  111. package/.opencode/mednotes/skills/obsidian-markdown/references/PROPERTIES.md +61 -0
  112. package/.opencode/mednotes/skills/obsidian-ops/SKILL.md +136 -0
  113. package/.opencode/mednotes/skills/pdf-library/SKILL.md +45 -0
  114. package/.opencode/mednotes/skills/process-medical-chats/SKILL.md +246 -0
  115. package/.opencode/mednotes/skills/workflow-report/SKILL.md +100 -0
  116. package/.opencode/mednotes/src/mednotes/__init__.py +5 -0
  117. package/.opencode/mednotes/src/mednotes/domains/__init__.py +5 -0
  118. package/.opencode/mednotes/src/mednotes/domains/flashcards/README.md +26 -0
  119. package/.opencode/mednotes/src/mednotes/domains/flashcards/__init__.py +2 -0
  120. package/.opencode/mednotes/src/mednotes/domains/flashcards/build_demo_apkg.py +177 -0
  121. package/.opencode/mednotes/src/mednotes/domains/flashcards/contracts.py +385 -0
  122. package/.opencode/mednotes/src/mednotes/domains/flashcards/flashcards_machine.py +522 -0
  123. package/.opencode/mednotes/src/mednotes/domains/flashcards/fsm.py +817 -0
  124. package/.opencode/mednotes/src/mednotes/domains/flashcards/index.py +630 -0
  125. package/.opencode/mednotes/src/mednotes/domains/flashcards/install_models.py +445 -0
  126. package/.opencode/mednotes/src/mednotes/domains/flashcards/model.py +359 -0
  127. package/.opencode/mednotes/src/mednotes/domains/flashcards/obsidian_links.py +135 -0
  128. package/.opencode/mednotes/src/mednotes/domains/flashcards/obsidian_note_utils.py +546 -0
  129. package/.opencode/mednotes/src/mednotes/domains/flashcards/pipeline.py +580 -0
  130. package/.opencode/mednotes/src/mednotes/domains/flashcards/report.py +510 -0
  131. package/.opencode/mednotes/src/mednotes/domains/flashcards/sources.py +682 -0
  132. package/.opencode/mednotes/src/mednotes/domains/flashcards/sync_rules.py +184 -0
  133. package/.opencode/mednotes/src/mednotes/domains/history/__init__.py +1 -0
  134. package/.opencode/mednotes/src/mednotes/domains/history/history_fsm.py +852 -0
  135. package/.opencode/mednotes/src/mednotes/domains/history/history_machine.py +453 -0
  136. package/.opencode/mednotes/src/mednotes/domains/setup/__init__.py +7 -0
  137. package/.opencode/mednotes/src/mednotes/domains/setup/setup_fsm.py +808 -0
  138. package/.opencode/mednotes/src/mednotes/domains/setup/setup_machine.py +973 -0
  139. package/.opencode/mednotes/src/mednotes/domains/wiki/README.md +64 -0
  140. package/.opencode/mednotes/src/mednotes/domains/wiki/__init__.py +1 -0
  141. package/.opencode/mednotes/src/mednotes/domains/wiki/api.py +668 -0
  142. package/.opencode/mednotes/src/mednotes/domains/wiki/batch_state.py +102 -0
  143. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/__init__.py +1 -0
  144. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/atomicity/__init__.py +1 -0
  145. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/atomicity/atomicity.py +877 -0
  146. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/body_link/__init__.py +1 -0
  147. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/body_link/body_linker.py +1562 -0
  148. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/effects/__init__.py +1 -0
  149. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/effects/effect_adapters.py +949 -0
  150. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/effects/fix_wiki_runtime_adapters.py +433 -0
  151. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/graph/__init__.py +1 -0
  152. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/graph/coverage.py +413 -0
  153. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/graph/graph.py +396 -0
  154. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/graph/graph_fixes.py +161 -0
  155. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/hygiene/__init__.py +1 -0
  156. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/hygiene/hygiene.py +483 -0
  157. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/__init__.py +2 -0
  158. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/anchors.py +185 -0
  159. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/__init__.py +0 -0
  160. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/cache.py +223 -0
  161. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/config.py +131 -0
  162. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/download.py +224 -0
  163. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/frontmatter.py +59 -0
  164. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/insert.py +227 -0
  165. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/local_import.py +54 -0
  166. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/sources/__init__.py +42 -0
  167. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/sources/web_profiles.py +99 -0
  168. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/sources/web_search.py +203 -0
  169. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/sources/wikimedia.py +102 -0
  170. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/markdown/__init__.py +1 -0
  171. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/markdown/markdown_db_adapter.mjs +434 -0
  172. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/markdown/markdown_node_runtime.py +274 -0
  173. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/markdown/markdown_query.py +227 -0
  174. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/__init__.py +1 -0
  175. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/artifacts.py +605 -0
  176. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/canonical_merge.py +277 -0
  177. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/markdown_zones.py +85 -0
  178. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/meaning_planner.py +307 -0
  179. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_iter.py +67 -0
  180. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_merge.py +278 -0
  181. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_plan.py +409 -0
  182. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_policy.py +22 -0
  183. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/__init__.py +79 -0
  184. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/fixes.py +264 -0
  185. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/frontmatter.py +435 -0
  186. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/models.py +208 -0
  187. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/prompts.py +37 -0
  188. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/tables.py +236 -0
  189. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/validate.py +404 -0
  190. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/provenance.py +478 -0
  191. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/raw_chats.py +273 -0
  192. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/sources_backfill.py +235 -0
  193. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/__init__.py +10 -0
  194. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/anchors.py +16 -0
  195. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/captions.py +47 -0
  196. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/cli.py +179 -0
  197. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/cloud.py +52 -0
  198. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/config.py +196 -0
  199. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/context_packets.py +76 -0
  200. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/db.py +81 -0
  201. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/doctor.py +102 -0
  202. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/figure_ids.py +42 -0
  203. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/ingest.py +326 -0
  204. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/insert.py +316 -0
  205. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/mentions.py +57 -0
  206. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/ocr.py +71 -0
  207. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/paths.py +35 -0
  208. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/pdf_engine.py +77 -0
  209. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/schema.py +155 -0
  210. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/search.py +188 -0
  211. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/tui/__init__.py +1 -0
  212. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/tui/app.py +89 -0
  213. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/tui/image_backend.py +29 -0
  214. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/tui/state.py +65 -0
  215. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/publish/__init__.py +1 -0
  216. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/publish/publish.py +1139 -0
  217. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/publish/publish_receipts.py +365 -0
  218. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/publish/publish_recovery.py +240 -0
  219. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/__init__.py +1 -0
  220. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/agent_behavior_corpus.py +2069 -0
  221. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/agent_report_validation.py +4448 -0
  222. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/agent_run_audit.py +852 -0
  223. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/architect_prompt_eval.py +341 -0
  224. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/body_linker_eval.py +240 -0
  225. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/curator_output_validation.py +175 -0
  226. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/curator_prompt_eval.py +865 -0
  227. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/triager_prompt_eval.py +1295 -0
  228. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/related_notes/__init__.py +1 -0
  229. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/related_notes/related_notes.py +1920 -0
  230. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/related_notes/related_notes_headless.py +1186 -0
  231. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/specialist/__init__.py +1 -0
  232. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/specialist/plan_attestation.py +148 -0
  233. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/specialist/specialist_receipts.py +360 -0
  234. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/specialist/specialist_runtime.py +52 -0
  235. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/specialist/specialist_task_runner.py +2470 -0
  236. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/style/__init__.py +1 -0
  237. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/style/style.py +1952 -0
  238. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/subagents/__init__.py +1 -0
  239. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/subagents/agents.py +1767 -0
  240. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/__init__.py +1 -0
  241. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/alias_projection.py +331 -0
  242. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/link_terms.py +151 -0
  243. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/llm_disambiguation.py +182 -0
  244. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/__init__.py +116 -0
  245. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/audit.py +201 -0
  246. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/migration.py +314 -0
  247. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/normalize.py +72 -0
  248. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/policy.py +135 -0
  249. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/resolve.py +413 -0
  250. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/schema.py +157 -0
  251. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/status.py +137 -0
  252. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/vocabulary_bootstrap.py +509 -0
  253. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/vocabulary_curator_batch.py +1115 -0
  254. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/vocabulary_ingestion.py +632 -0
  255. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/vocabulary_map.py +930 -0
  256. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/vocabulary_recovery.py +1388 -0
  257. package/.opencode/mednotes/src/mednotes/domains/wiki/cli.py +6665 -0
  258. package/.opencode/mednotes/src/mednotes/domains/wiki/common.py +69 -0
  259. package/.opencode/mednotes/src/mednotes/domains/wiki/config.py +210 -0
  260. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/__init__.py +74 -0
  261. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/agent_report.py +242 -0
  262. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/agent_run_audit.py +196 -0
  263. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/agents.py +601 -0
  264. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/curator.py +256 -0
  265. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/effect_payloads.py +519 -0
  266. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/happy_path.py +190 -0
  267. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/link_git.py +110 -0
  268. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/link_runtime_artifact.py +52 -0
  269. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/note_plan.py +75 -0
  270. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/paths.py +114 -0
  271. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/public_report.py +53 -0
  272. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/publish.py +111 -0
  273. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/raw_coverage.py +217 -0
  274. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/related_notes.py +136 -0
  275. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/related_notes_headless.py +153 -0
  276. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/related_notes_runtime.py +395 -0
  277. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/schema_registry.py +637 -0
  278. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/specialist.py +432 -0
  279. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/status.py +62 -0
  280. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/style_rewrite.py +568 -0
  281. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/vocabulary_ingestion.py +223 -0
  282. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/workflow_blockers.py +510 -0
  283. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/workflow_guardrails.py +637 -0
  284. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/workflow_outcomes.py +121 -0
  285. package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/workflow_receipts.py +100 -0
  286. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/__init__.py +1 -0
  287. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/__init__.py +1 -0
  288. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/__main__.py +4 -0
  289. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/cli.py +275 -0
  290. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/workflow/__init__.py +2 -0
  291. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/workflow/candidates.py +193 -0
  292. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/workflow/cli.py +189 -0
  293. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/workflow/gemini.py +220 -0
  294. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/workflow/inputs.py +120 -0
  295. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/workflow/models.py +34 -0
  296. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/workflow/parsing.py +48 -0
  297. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/workflow/prompts.py +216 -0
  298. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/workflow/quality.py +54 -0
  299. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/workflow/reporting.py +24 -0
  300. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/workflow/runner.py +433 -0
  301. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/workflow/utils.py +39 -0
  302. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/enrich/workflow/vault_guard_bridge.py +17 -0
  303. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/fix_wiki/__init__.py +1 -0
  304. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/fix_wiki/fix_wiki_context_packets.py +454 -0
  305. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/fix_wiki/fix_wiki_decision_projection.py +133 -0
  306. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/fix_wiki/fix_wiki_effects.py +1260 -0
  307. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/fix_wiki/fix_wiki_fsm.py +2768 -0
  308. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/fix_wiki/fix_wiki_machine.py +1588 -0
  309. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/fix_wiki/fix_wiki_plan.py +306 -0
  310. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/fix_wiki/fix_wiki_primary_objective.py +316 -0
  311. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/fix_wiki/fix_wiki_problem.py +153 -0
  312. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/fix_wiki/fix_wiki_receipt_evidence.py +306 -0
  313. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/fix_wiki/fix_wiki_states.py +290 -0
  314. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/fix_wiki/fix_wiki_user_report.py +342 -0
  315. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/fix_wiki/health.py +6332 -0
  316. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/link/__init__.py +1 -0
  317. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/link/link_fsm.py +1119 -0
  318. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/link/link_git.py +638 -0
  319. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/link/link_machine.py +1106 -0
  320. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/link/link_retry_governance.py +374 -0
  321. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/link/link_runtime_result.py +485 -0
  322. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/link/link_triggers.py +183 -0
  323. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/link/linking.py +2758 -0
  324. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/link/reference_repair.py +718 -0
  325. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/link/related_notes_fsm.py +1855 -0
  326. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/link_related/__init__.py +1 -0
  327. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/link_related/link_related_machine.py +834 -0
  328. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/process_chats/__init__.py +1 -0
  329. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/process_chats/process_chats_fsm.py +1592 -0
  330. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/process_chats/process_chats_machine.py +3097 -0
  331. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/process_chats/process_chats_primary_objective.py +28 -0
  332. package/.opencode/mednotes/src/mednotes/domains/wiki/flows/process_chats/process_chats_runtime_result.py +185 -0
  333. package/.opencode/mednotes/src/mednotes/domains/wiki/performance.py +97 -0
  334. package/.opencode/mednotes/src/mednotes/kernel/__init__.py +6 -0
  335. package/.opencode/mednotes/src/mednotes/kernel/agent_directive.py +336 -0
  336. package/.opencode/mednotes/src/mednotes/kernel/base.py +51 -0
  337. package/.opencode/mednotes/src/mednotes/kernel/blockers.py +39 -0
  338. package/.opencode/mednotes/src/mednotes/kernel/effect_executor.py +55 -0
  339. package/.opencode/mednotes/src/mednotes/kernel/effect_intent.py +69 -0
  340. package/.opencode/mednotes/src/mednotes/kernel/effects.py +160 -0
  341. package/.opencode/mednotes/src/mednotes/kernel/errors.py +38 -0
  342. package/.opencode/mednotes/src/mednotes/kernel/fsm_event.py +35 -0
  343. package/.opencode/mednotes/src/mednotes/kernel/fsm_model.py +55 -0
  344. package/.opencode/mednotes/src/mednotes/kernel/fsm_transition_result.py +75 -0
  345. package/.opencode/mednotes/src/mednotes/kernel/guardrails.py +188 -0
  346. package/.opencode/mednotes/src/mednotes/kernel/progress.py +319 -0
  347. package/.opencode/mednotes/src/mednotes/kernel/public_report.py +346 -0
  348. package/.opencode/mednotes/src/mednotes/kernel/state_machine.py +164 -0
  349. package/.opencode/mednotes/src/mednotes/kernel/workflow.py +619 -0
  350. package/.opencode/mednotes/src/mednotes/platform/__init__.py +5 -0
  351. package/.opencode/mednotes/src/mednotes/platform/backup_policy.py +382 -0
  352. package/.opencode/mednotes/src/mednotes/platform/feedback/__init__.py +62 -0
  353. package/.opencode/mednotes/src/mednotes/platform/feedback/cli.py +275 -0
  354. package/.opencode/mednotes/src/mednotes/platform/feedback/contracts.py +83 -0
  355. package/.opencode/mednotes/src/mednotes/platform/feedback/core.py +4168 -0
  356. package/.opencode/mednotes/src/mednotes/platform/feedback/integrity.py +989 -0
  357. package/.opencode/mednotes/src/mednotes/platform/feedback/operational_contract.py +2293 -0
  358. package/.opencode/mednotes/src/mednotes/platform/feedback/telemetry.py +875 -0
  359. package/.opencode/mednotes/src/mednotes/platform/feedback/telemetry_config.py +65 -0
  360. package/.opencode/mednotes/src/mednotes/platform/opencode_runtime_config.py +182 -0
  361. package/.opencode/mednotes/src/mednotes/platform/paths/__init__.py +1560 -0
  362. package/.opencode/mednotes/src/mednotes/platform/secrets.py +89 -0
  363. package/.opencode/mednotes/src/mednotes/platform/user_config.py +103 -0
  364. package/.opencode/mednotes/src/mednotes/platform/vault_guard.py +214 -0
  365. package/.opencode/mednotes/uv.lock +932 -0
  366. package/.opencode/mednotes.generated.json +395 -0
  367. package/.opencode/opencode.json +31 -0
  368. package/.opencode/plugins/mednotes-fsm.mjs +7 -0
  369. package/.opencode/plugins/mednotes_hook/adapters/antigravity.mjs +169 -0
  370. package/.opencode/plugins/mednotes_hook/adapters/harness_payload.mjs +103 -0
  371. package/.opencode/plugins/mednotes_hook/adapters/opencode_plugin.mjs +341 -0
  372. package/.opencode/plugins/mednotes_hook/adapters/opencode_user_config_sync.mjs +177 -0
  373. package/.opencode/plugins/mednotes_hook/anki_preflight.mjs +214 -0
  374. package/.opencode/plugins/mednotes_hook/cli.mjs +143 -0
  375. package/.opencode/plugins/mednotes_hook/diagnostics.mjs +11 -0
  376. package/.opencode/plugins/mednotes_hook/domain/agent_directive_core.mjs +160 -0
  377. package/.opencode/plugins/mednotes_hook/fsm_directive.mjs +1470 -0
  378. package/.opencode/plugins/mednotes_hook/hook_errors.mjs +120 -0
  379. package/.opencode/plugins/mednotes_hook/retention.mjs +114 -0
  380. package/.opencode/plugins/mednotes_hook/runtime.mjs +174 -0
  381. package/.opencode/plugins/mednotes_hook/telemetry_capture.mjs +511 -0
  382. package/.opencode/plugins/mednotes_hook/vault_guard.mjs +624 -0
  383. package/AGENTS.md +57 -0
  384. package/README.md +194 -0
  385. package/adapters/antigravity/agents.json +80 -0
  386. package/adapters/antigravity/templates/med-chat-triager.md +214 -0
  387. package/adapters/antigravity/templates/med-flashcard-maker.md +72 -0
  388. package/adapters/antigravity/templates/med-knowledge-architect.md +241 -0
  389. package/adapters/antigravity/templates/med-link-graph-curator.md +187 -0
  390. package/adapters/antigravity/templates/med-publish-guard.md +71 -0
  391. package/adapters/gemini-cli/gemini-extension.json +14 -0
  392. package/adapters/gemini-cli/package.json +15 -0
  393. package/adapters/gemini-cli/pyproject.toml +48 -0
  394. package/bin/mednotes-opencode.mjs +155 -0
  395. package/contracts/agents.json +116 -0
  396. package/core/agents/med-chat-triager.md +197 -0
  397. package/core/agents/med-flashcard-maker.md +56 -0
  398. package/core/agents/med-knowledge-architect.md +224 -0
  399. package/core/agents/med-link-graph-curator.md +171 -0
  400. package/core/agents/med-publish-guard.md +55 -0
  401. package/core/commands/flashcards.toml +22 -0
  402. package/core/commands/mednotes/create.toml +22 -0
  403. package/core/commands/mednotes/enrich.toml +24 -0
  404. package/core/commands/mednotes/fix-wiki.toml +24 -0
  405. package/core/commands/mednotes/history.toml +19 -0
  406. package/core/commands/mednotes/link-body.toml +22 -0
  407. package/core/commands/mednotes/link-related.toml +24 -0
  408. package/core/commands/mednotes/link.toml +24 -0
  409. package/core/commands/mednotes/pdf-library.toml +24 -0
  410. package/core/commands/mednotes/process-chats.toml +20 -0
  411. package/core/commands/mednotes/setup.toml +18 -0
  412. package/core/commands/mednotes/status.toml +24 -0
  413. package/core/commands/mednotes/telemetry.toml +24 -0
  414. package/core/commands/report.toml +23 -0
  415. package/core/skills/THIRD_PARTY_NOTICES.md +45 -0
  416. package/core/skills/create-medical-flashcards/SKILL.md +113 -0
  417. package/core/skills/create-medical-note/SKILL.md +90 -0
  418. package/core/skills/enrich-medical-note/SKILL.md +120 -0
  419. package/core/skills/fix-medical-wiki/SKILL.md +559 -0
  420. package/core/skills/link-medical-wiki/SKILL.md +224 -0
  421. package/core/skills/obsidian-cli/SKILL.md +118 -0
  422. package/core/skills/obsidian-markdown/SKILL.md +207 -0
  423. package/core/skills/obsidian-markdown/references/CALLOUTS.md +58 -0
  424. package/core/skills/obsidian-markdown/references/EMBEDS.md +63 -0
  425. package/core/skills/obsidian-markdown/references/PROPERTIES.md +61 -0
  426. package/core/skills/obsidian-ops/SKILL.md +136 -0
  427. package/core/skills/pdf-library/SKILL.md +45 -0
  428. package/core/skills/process-medical-chats/SKILL.md +246 -0
  429. package/core/skills/workflow-report/SKILL.md +100 -0
  430. package/package.json +45 -0
@@ -0,0 +1,177 @@
1
+ #!/usr/bin/env python3
2
+ """Gera um .apkg de demonstração com os modelos `Medicina` e `Medicina Cloze`.
3
+
4
+ Lê os templates HTML/CSS de `bundle/docs/anki-templates/`, monta os dois
5
+ note types e adiciona alguns cards exemplares para inspeção visual no Anki
6
+ Desktop. Útil sempre que os templates mudarem e você quiser ver o resultado sem
7
+ mexer no deck real.
8
+
9
+ Uso:
10
+
11
+ uv run --with genanki python ${extensionPath}/scripts/mednotes/flashcards/build_demo_apkg.py \\
12
+ --output ~/Downloads/medicina-flashcards-demo.apkg
13
+ """
14
+ from __future__ import annotations
15
+
16
+ import argparse
17
+ import sys
18
+ from pathlib import Path
19
+
20
+ try:
21
+ import genanki # type: ignore[import-error] # optional dep, guarded by except below
22
+ except ModuleNotFoundError: # pragma: no cover
23
+ print(
24
+ "Falta a dep `genanki`. Rode com: uv run --with genanki python ...",
25
+ file=sys.stderr,
26
+ )
27
+ raise
28
+
29
+
30
+ TEMPLATES_DIR = Path(__file__).resolve().parents[4] / "docs" / "anki-templates"
31
+
32
+ # IDs estáveis pra Anki não tratar como modelo novo a cada import.
33
+ QA_MODEL_ID = 1726123001
34
+ CLOZE_MODEL_ID = 1726123002
35
+ DECK_ID = 1726123003
36
+
37
+ DECK_NAME = "Medicina::_Demo"
38
+ DEMO_OBSIDIAN = "obsidian://open?vault=Wiki_Medicina&file=Cardiologia%2FPonte_Miocardica.md"
39
+
40
+
41
+ def _read(name: str) -> str:
42
+ return (TEMPLATES_DIR / name).read_text(encoding="utf-8")
43
+
44
+
45
+ def build_qa_model(css: str) -> genanki.Model:
46
+ return genanki.Model(
47
+ QA_MODEL_ID,
48
+ "Medicina",
49
+ fields=[
50
+ {"name": "Frente"},
51
+ {"name": "Verso"},
52
+ {"name": "Verso Extra"},
53
+ {"name": "Obsidian"},
54
+ ],
55
+ templates=[
56
+ {
57
+ "name": "Card 1",
58
+ "qfmt": _read("qa.front.html"),
59
+ "afmt": _read("qa.back.html"),
60
+ }
61
+ ],
62
+ css=css,
63
+ )
64
+
65
+
66
+ def build_cloze_model(css: str) -> genanki.Model:
67
+ return genanki.Model(
68
+ CLOZE_MODEL_ID,
69
+ "Medicina Cloze",
70
+ fields=[
71
+ {"name": "Texto"},
72
+ {"name": "Verso Extra"},
73
+ {"name": "Obsidian"},
74
+ ],
75
+ templates=[
76
+ {
77
+ "name": "Cloze",
78
+ "qfmt": _read("cloze.front.html"),
79
+ "afmt": _read("cloze.back.html"),
80
+ }
81
+ ],
82
+ css=css,
83
+ model_type=genanki.Model.CLOZE,
84
+ )
85
+
86
+
87
+ def demo_notes(qa_model: genanki.Model, cloze_model: genanki.Model) -> list[genanki.Note]:
88
+ return [
89
+ genanki.Note(
90
+ model=qa_model,
91
+ fields=[
92
+ "O que é ponte miocárdica?",
93
+ "Trajeto intramiocárdico de uma artéria coronária epicárdica.",
94
+ (
95
+ "<br><br>"
96
+ "<ul>"
97
+ "<li>Mais frequente na <strong>artéria descendente anterior</strong>.</li>"
98
+ "<li>Geralmente <em>assintomática</em>; pode causar isquemia em compressão sistólica intensa.</li>"
99
+ "<li>Diagnóstico padrão por angio-CT coronariana ou ICA.</li>"
100
+ "</ul>"
101
+ ),
102
+ DEMO_OBSIDIAN,
103
+ ],
104
+ ),
105
+ genanki.Note(
106
+ model=qa_model,
107
+ fields=[
108
+ "Qual o achado angiográfico clássico de ponte miocárdica?",
109
+ "<em>Milking effect</em> — estreitamento sistólico transitório com normalização diastólica.",
110
+ (
111
+ "<br><br>"
112
+ "Procurar segmento comprimido apenas na sístole. "
113
+ "Use <code>FFR</code> com dobutamina quando dúvida sobre repercussão funcional."
114
+ ),
115
+ DEMO_OBSIDIAN,
116
+ ],
117
+ ),
118
+ genanki.Note(
119
+ model=cloze_model,
120
+ fields=[
121
+ (
122
+ "A {{c1::ponte miocárdica}} envolve com mais frequência a "
123
+ "{{c2::artéria descendente anterior}} e tipicamente cursa com "
124
+ "{{c3::compressão sistólica}} do segmento tunelizado."
125
+ ),
126
+ (
127
+ "<br><br>"
128
+ "Cloze múltiplo demonstrando a Twenty Rules #5: três fatos "
129
+ "atômicos no mesmo contexto, cada um vira um card distinto."
130
+ ),
131
+ DEMO_OBSIDIAN,
132
+ ],
133
+ ),
134
+ genanki.Note(
135
+ model=cloze_model,
136
+ fields=[
137
+ (
138
+ "O diagnóstico de ponte miocárdica pode ser feito por "
139
+ "{{c1::angio-CT coronariana}} ou {{c2::angiografia invasiva}}, "
140
+ "sendo o achado clássico o {{c3::milking effect}}."
141
+ ),
142
+ "",
143
+ DEMO_OBSIDIAN,
144
+ ],
145
+ ),
146
+ ]
147
+
148
+
149
+ def build_package(output: Path) -> Path:
150
+ css = _read("style.css")
151
+ qa_model = build_qa_model(css)
152
+ cloze_model = build_cloze_model(css)
153
+ deck = genanki.Deck(DECK_ID, DECK_NAME)
154
+ for note in demo_notes(qa_model, cloze_model):
155
+ deck.add_note(note)
156
+ package = genanki.Package(deck)
157
+ output.parent.mkdir(parents=True, exist_ok=True)
158
+ package.write_to_file(str(output))
159
+ return output
160
+
161
+
162
+ def main(argv: list[str] | None = None) -> int:
163
+ parser = argparse.ArgumentParser(description=__doc__)
164
+ parser.add_argument(
165
+ "--output",
166
+ default=str(Path.home() / "Downloads" / "medicina-flashcards-demo.apkg"),
167
+ help="caminho do .apkg de saída (default: ~/Downloads/medicina-flashcards-demo.apkg)",
168
+ )
169
+ args = parser.parse_args(argv)
170
+
171
+ output = build_package(Path(args.output).expanduser())
172
+ print(f"OK: {output}")
173
+ return 0
174
+
175
+
176
+ if __name__ == "__main__":
177
+ raise SystemExit(main())
@@ -0,0 +1,385 @@
1
+ from __future__ import annotations
2
+
3
+ from typing import Literal
4
+
5
+ from pydantic import Field, StrictBool, StrictStr, ValidationInfo, field_validator, model_validator
6
+
7
+ from mednotes.kernel.base import ContractModel, JsonObject
8
+
9
+ ANKI_MODEL_SET_VALIDATION_SCHEMA = "medical-notes-workbench.anki-model-set-validation.v1"
10
+ FLASHCARD_REPORT_SCHEMA = "medical-notes-workbench.flashcard-report.v1"
11
+ FLASHCARD_APPLY_SCHEMA = "medical-notes-workbench.flashcard-apply-result.v1"
12
+ FLASHCARDS_TAGGING_RECEIPT_SCHEMA = "medical-notes-workbench.flashcards-tagging-receipt.v1"
13
+
14
+
15
+ class FlashcardObsidianLinkError(ValueError):
16
+ """Raised when a candidate card carries a divergent Obsidian deeplink."""
17
+
18
+
19
+ def _clean(value: str) -> str:
20
+ return str(value or "").strip()
21
+
22
+
23
+ class FlashcardsTaggingReceipt(ContractModel):
24
+ """Receipt proving the Obsidian `anki` tag step ran through the FSM effect."""
25
+
26
+ schema_id: Literal["medical-notes-workbench.flashcards-tagging-receipt.v1"] = Field(
27
+ default=FLASHCARDS_TAGGING_RECEIPT_SCHEMA,
28
+ alias="schema",
29
+ )
30
+ workflow: Literal["/flashcards"] = "/flashcards"
31
+ effect_target: Literal["flashcards.tag_obsidian"] = "flashcards.tag_obsidian"
32
+ status: Literal["completed", "completed_noop", "dry_run"]
33
+ changed_files: list[str] = Field(default_factory=list)
34
+ tag: str = Field(min_length=1)
35
+ vault_guard_receipt: JsonObject = Field(default_factory=dict)
36
+ records: list[JsonObject] = Field(default_factory=list)
37
+
38
+
39
+ class FlashcardsVaultGuardReceipt(ContractModel):
40
+ """Vault guard proof required before the flashcards workflow mutates Obsidian tags."""
41
+
42
+ schema_id: StrictStr = Field(default="", alias="schema")
43
+ workflow: Literal["/flashcards"]
44
+ effect_kind: Literal["run_subworkflow"]
45
+ effect_target: Literal["flashcards.tag_obsidian"]
46
+ resource_guard_active: StrictBool
47
+ rollback_declared: StrictBool
48
+ receipt_id: StrictStr = Field(min_length=1)
49
+
50
+
51
+ class FlashcardSourceNote(ContractModel):
52
+ path: str
53
+ title: str = ""
54
+ absolute_path: str
55
+ path_style: Literal["posix", "windows_drive", "windows_unc"]
56
+ vault_root: str = ""
57
+ vault_name: str = ""
58
+ vault_relative_path: str = ""
59
+ link_mode: Literal["vault_file", "absolute_path"] = "absolute_path"
60
+ deeplink: str
61
+ deeplink_mode: Literal["vault_file", "absolute_path"]
62
+ deeplink_candidates: list[str] = Field(default_factory=list)
63
+ deck: str
64
+ frontmatter_tags: list[str] = Field(default_factory=list)
65
+ inline_tags: list[str] = Field(default_factory=list)
66
+ content_sha256: str
67
+ tags: list[str] = Field(default_factory=list)
68
+ already_marked_anki: bool = False
69
+ line_count: int = Field(default=0, ge=0)
70
+ heading_count: int = Field(default=0, ge=0)
71
+ skip_reason: str = ""
72
+ skip_tags: list[str] = Field(default_factory=list)
73
+
74
+ @field_validator("path", "absolute_path", "deeplink", "deck", "content_sha256")
75
+ @classmethod
76
+ def _required_text(cls, value: str, info: ValidationInfo) -> str:
77
+ cleaned = _clean(value)
78
+ if not cleaned:
79
+ raise ValueError(f"{info.field_name} must be non-empty")
80
+ return cleaned
81
+
82
+
83
+ class FlashcardSourceScope(ContractModel):
84
+ raw: str = ""
85
+ inputs: list[str] = Field(default_factory=list)
86
+ tags: list[str] = Field(default_factory=list)
87
+ skip_tags: list[str] = Field(default_factory=list)
88
+ folders: list[str] = Field(default_factory=list)
89
+ tag_match: str = "any"
90
+ vault_root: str = ""
91
+ vault_name: str = ""
92
+
93
+
94
+ class FlashcardSourceSummary(ContractModel):
95
+ candidate_file_count: int = Field(default=0, ge=0)
96
+ file_count: int = Field(default=0, ge=0)
97
+ skipped_count: int = Field(default=0, ge=0)
98
+ requires_confirmation: bool = False
99
+ confirmation_reasons: list[str] = Field(default_factory=list)
100
+ card_candidate_confirmation_limit: int = Field(default=0, ge=0)
101
+
102
+
103
+ class FlashcardSourceManifest(ContractModel):
104
+ schema_id: str = Field(default="medical-notes-workbench.flashcard-sources.v1", alias="schema")
105
+ dry_run: bool = False
106
+ scope: FlashcardSourceScope = Field(default_factory=FlashcardSourceScope)
107
+ summary: FlashcardSourceSummary = Field(default_factory=FlashcardSourceSummary)
108
+ notes: list[FlashcardSourceNote] = Field(default_factory=list)
109
+ skipped_notes: list[FlashcardSourceNote] = Field(default_factory=list)
110
+ warnings: list[str] = Field(default_factory=list)
111
+
112
+ def note_by_path(self) -> dict[str, FlashcardSourceNote]:
113
+ return {note.path: note for note in self.notes}
114
+
115
+
116
+ class FlashcardCandidateFields(ContractModel):
117
+ Frente: str = ""
118
+ Verso: str = ""
119
+ Verso_Extra: str = Field(default="", alias="Verso Extra")
120
+ Obsidian: str = ""
121
+ Texto: str = ""
122
+
123
+
124
+ class FlashcardCandidateCard(ContractModel):
125
+ source_path: str
126
+ source_content_sha256: str
127
+ deck: str = ""
128
+ note_model: str
129
+ fields: FlashcardCandidateFields
130
+
131
+ @field_validator("source_path", "source_content_sha256", "note_model")
132
+ @classmethod
133
+ def _required_text(cls, value: str, info: ValidationInfo) -> str:
134
+ cleaned = _clean(value)
135
+ if not cleaned:
136
+ raise ValueError(f"{info.field_name} must be non-empty")
137
+ return cleaned
138
+
139
+
140
+ class FlashcardCandidateBatch(ContractModel):
141
+ source_manifest: FlashcardSourceManifest
142
+ candidate_cards: list[FlashcardCandidateCard] = Field(default_factory=list)
143
+
144
+ @model_validator(mode="after")
145
+ def _sources_must_match_manifest(self) -> FlashcardCandidateBatch:
146
+ notes = self.source_manifest.note_by_path()
147
+ for card in self.candidate_cards:
148
+ if card.source_path not in notes:
149
+ raise ValueError(
150
+ f"candidate source_path not present in source_manifest: {card.source_path}"
151
+ )
152
+ note = notes[card.source_path]
153
+ if card.source_content_sha256 != note.content_sha256:
154
+ raise ValueError(f"source_content_sha256 mismatch for {card.source_path}")
155
+ return self
156
+
157
+
158
+ class FlashcardPreparedCard(FlashcardCandidateCard):
159
+ card_hash: str
160
+ source_relative_path: str = ""
161
+ duplicate_of: str = ""
162
+
163
+
164
+ class FlashcardAnkiNoteOptions(ContractModel):
165
+ allowDuplicate: bool = False
166
+
167
+
168
+ class FlashcardAnkiNote(ContractModel):
169
+ deckName: str
170
+ modelName: str
171
+ fields: FlashcardCandidateFields
172
+ tags: list[str] = Field(default_factory=list)
173
+ options: FlashcardAnkiNoteOptions = Field(default_factory=FlashcardAnkiNoteOptions)
174
+
175
+
176
+ class FlashcardFindQuery(ContractModel):
177
+ card_hash: str
178
+ query: str
179
+
180
+
181
+ class FlashcardIndexSummary(ContractModel):
182
+ candidate_count: int = Field(ge=0)
183
+ new_count: int = Field(ge=0)
184
+ duplicate_count: int = Field(ge=0)
185
+
186
+
187
+ class FlashcardIndexCheck(ContractModel):
188
+ schema_id: str = Field(
189
+ default="medical-notes-workbench.flashcard-index-check.v1",
190
+ alias="schema",
191
+ )
192
+ new_cards: list[FlashcardPreparedCard] = Field(default_factory=list)
193
+ duplicate_cards: list[FlashcardPreparedCard] = Field(default_factory=list)
194
+ summary: FlashcardIndexSummary
195
+
196
+
197
+ class FlashcardCheckedModel(ContractModel):
198
+ name: str
199
+ fields: list[str] = Field(default_factory=list)
200
+ missing_fields: list[str] = Field(default_factory=list)
201
+
202
+
203
+ class FlashcardResolvedModel(ContractModel):
204
+ ok: bool = False
205
+ model: str = ""
206
+ fields: list[str] = Field(default_factory=list)
207
+ required_fields: list[str] = Field(default_factory=list)
208
+ checked_models: list[FlashcardCheckedModel] = Field(default_factory=list)
209
+
210
+
211
+ class FlashcardModelValidation(ContractModel):
212
+ schema_id: str = Field(default="", alias="schema")
213
+ ok: bool
214
+ model: str = ""
215
+ fields: list[str] = Field(default_factory=list)
216
+ required_fields: list[str] = Field(default_factory=list)
217
+ checked_models: list[FlashcardCheckedModel] = Field(default_factory=list)
218
+ missing_fields: list[str] = Field(default_factory=list)
219
+ missing_kinds: list[str] = Field(default_factory=list)
220
+ qa: FlashcardResolvedModel | None = None
221
+ cloze: FlashcardResolvedModel | None = None
222
+ warning: str = ""
223
+
224
+ @model_validator(mode="after")
225
+ def _model_set_ok_requires_complete_models(self) -> FlashcardModelValidation:
226
+ if self.schema_id != ANKI_MODEL_SET_VALIDATION_SCHEMA or not self.ok:
227
+ return self
228
+
229
+ invalid_kinds: list[str] = []
230
+ for kind, resolved_model in (("qa", self.qa), ("cloze", self.cloze)):
231
+ if (
232
+ resolved_model is None
233
+ or not resolved_model.ok
234
+ or not _clean(resolved_model.model)
235
+ ):
236
+ invalid_kinds.append(kind)
237
+
238
+ if invalid_kinds:
239
+ kinds = ", ".join(invalid_kinds)
240
+ raise ValueError(
241
+ "model-set validation with ok=true requires complete qa and cloze "
242
+ f"model results; missing or invalid: {kinds}"
243
+ )
244
+ return self
245
+
246
+
247
+ class FlashcardPreferredModels(ContractModel):
248
+ qa: str = ""
249
+ cloze: str = ""
250
+
251
+ @field_validator("qa", "cloze", mode="before")
252
+ @classmethod
253
+ def _optional_text(cls, value: object) -> str:
254
+ return value.strip() if isinstance(value, str) else ""
255
+
256
+
257
+ class FlashcardModelPreference(ContractModel):
258
+ preferred_model: str = ""
259
+ preferred_models: FlashcardPreferredModels = Field(default_factory=FlashcardPreferredModels)
260
+
261
+ @field_validator("preferred_model", mode="before")
262
+ @classmethod
263
+ def _optional_text(cls, value: object) -> str:
264
+ return value.strip() if isinstance(value, str) else ""
265
+
266
+
267
+ class FlashcardSourceStatusRecord(ContractModel):
268
+ path: str
269
+ vault_relative_path: str = ""
270
+ status: str
271
+ current_content_sha256: str = ""
272
+ indexed_content_sha256: str = ""
273
+ indexed_card_count: int = Field(default=0, ge=0)
274
+
275
+
276
+ class FlashcardSourceStatusSummary(ContractModel):
277
+ new_count: int = Field(default=0, ge=0)
278
+ unchanged_count: int = Field(default=0, ge=0)
279
+ changed_count: int = Field(default=0, ge=0)
280
+
281
+
282
+ class FlashcardSourceStatus(ContractModel):
283
+ schema_id: str = Field(
284
+ default="medical-notes-workbench.flashcards-source-status.v1",
285
+ alias="schema",
286
+ )
287
+ summary: FlashcardSourceStatusSummary = Field(default_factory=FlashcardSourceStatusSummary)
288
+ sources: list[FlashcardSourceStatusRecord] = Field(default_factory=list)
289
+
290
+
291
+ class FlashcardWriteSummary(ContractModel):
292
+ candidate_count: int = Field(ge=0)
293
+ new_count: int = Field(ge=0)
294
+ duplicate_count: int = Field(ge=0)
295
+ changed_source_count: int = Field(ge=0)
296
+ anki_note_count: int = Field(ge=0)
297
+
298
+
299
+ class FlashcardWritePlan(ContractModel):
300
+ schema_id: Literal["medical-notes-workbench.flashcard-write-plan.v1"] = Field(
301
+ default="medical-notes-workbench.flashcard-write-plan.v1",
302
+ alias="schema",
303
+ )
304
+ blocked: bool = False
305
+ blocked_reason: str = ""
306
+ next_action: str = ""
307
+ requires_reprocess_confirmation: bool = False
308
+ model_validation: FlashcardModelValidation
309
+ source_status: FlashcardSourceStatus
310
+ index_check: FlashcardIndexCheck
311
+ changed_sources: list[FlashcardSourceStatusRecord] = Field(default_factory=list)
312
+ anki_find_queries: list[FlashcardFindQuery] = Field(default_factory=list)
313
+ anki_notes: list[FlashcardAnkiNote] = Field(default_factory=list)
314
+ new_cards: list[FlashcardPreparedCard] = Field(default_factory=list)
315
+ duplicate_cards: list[FlashcardPreparedCard] = Field(default_factory=list)
316
+ summary: FlashcardWriteSummary
317
+
318
+
319
+ class FlashcardAcceptedCard(FlashcardPreparedCard):
320
+ anki_note_id: int
321
+
322
+
323
+ class FlashcardReportSummary(ContractModel):
324
+ processed_note_count: int = Field(ge=0)
325
+ created_card_count: int = Field(ge=0)
326
+ duplicate_card_count: int = Field(ge=0)
327
+ skipped_note_count: int = Field(ge=0)
328
+ model_error_count: int = Field(ge=0)
329
+ anki_error_count: int = Field(ge=0)
330
+ obsidian_links_valid: bool = Field(strict=True)
331
+
332
+
333
+ class FlashcardModelErrorSummary(ContractModel):
334
+ required_fields: list[str] = Field(default_factory=list)
335
+ checked_models: list[FlashcardCheckedModel] = Field(default_factory=list)
336
+
337
+
338
+ class FlashcardReport(ContractModel):
339
+ """Typed final report consumed by /flashcards FSM apply projection."""
340
+
341
+ schema_id: Literal["medical-notes-workbench.flashcard-report.v1"] = Field(
342
+ default=FLASHCARD_REPORT_SCHEMA,
343
+ alias="schema",
344
+ )
345
+ summary: FlashcardReportSummary
346
+ processed_sources: list[str] = Field(default_factory=list)
347
+ duplicate_cards: list[JsonObject] = Field(default_factory=list)
348
+ skipped_notes: list[JsonObject] = Field(default_factory=list)
349
+ model_error: FlashcardModelErrorSummary | None = None
350
+ anki_errors: list[str] = Field(default_factory=list)
351
+
352
+
353
+ class FlashcardApplyResult(ContractModel):
354
+ """Typed apply command result; this is the only apply payload the FSM reads."""
355
+
356
+ schema_id: Literal["medical-notes-workbench.flashcard-apply-result.v1"] = Field(
357
+ default=FLASHCARD_APPLY_SCHEMA,
358
+ alias="schema",
359
+ )
360
+ summary: JsonObject = Field(default_factory=dict)
361
+ report: FlashcardReport
362
+
363
+
364
+ def normalize_candidate_batch(batch: FlashcardCandidateBatch) -> FlashcardCandidateBatch:
365
+ notes = batch.source_manifest.note_by_path()
366
+ normalized_cards: list[FlashcardCandidateCard] = []
367
+ for card in batch.candidate_cards:
368
+ note = notes[card.source_path]
369
+ fields = card.fields.model_copy()
370
+ if not fields.Obsidian:
371
+ fields.Obsidian = note.deeplink
372
+ elif fields.Obsidian != note.deeplink:
373
+ raise FlashcardObsidianLinkError(f"divergent Obsidian link for {card.source_path}")
374
+ normalized_cards.append(
375
+ card.model_copy(
376
+ update={
377
+ "deck": card.deck or note.deck,
378
+ "fields": fields,
379
+ }
380
+ )
381
+ )
382
+ return FlashcardCandidateBatch(
383
+ source_manifest=batch.source_manifest,
384
+ candidate_cards=normalized_cards,
385
+ )