mednotes-opencode 0.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.opencode/agents/med-chat-triager.md +204 -0
- package/.opencode/agents/med-flashcard-maker.md +63 -0
- package/.opencode/agents/med-knowledge-architect.md +230 -0
- package/.opencode/agents/med-link-graph-curator.md +177 -0
- package/.opencode/agents/med-publish-guard.md +62 -0
- package/.opencode/commands/flashcards.md +25 -0
- package/.opencode/commands/mednotes/create.md +25 -0
- package/.opencode/commands/mednotes/enrich.md +27 -0
- package/.opencode/commands/mednotes/fix-wiki.md +27 -0
- package/.opencode/commands/mednotes/history.md +22 -0
- package/.opencode/commands/mednotes/link-body.md +25 -0
- package/.opencode/commands/mednotes/link-related.md +27 -0
- package/.opencode/commands/mednotes/link.md +27 -0
- package/.opencode/commands/mednotes/pdf-library.md +27 -0
- package/.opencode/commands/mednotes/process-chats.md +23 -0
- package/.opencode/commands/mednotes/setup.md +21 -0
- package/.opencode/commands/mednotes/status.md +27 -0
- package/.opencode/commands/mednotes/telemetry.md +27 -0
- package/.opencode/commands/report.md +26 -0
- package/.opencode/mednotes/AGENTS.md +57 -0
- package/.opencode/mednotes/agents/med-chat-triager.md +197 -0
- package/.opencode/mednotes/agents/med-flashcard-maker.md +56 -0
- package/.opencode/mednotes/agents/med-knowledge-architect.md +224 -0
- package/.opencode/mednotes/agents/med-link-graph-curator.md +171 -0
- package/.opencode/mednotes/agents/med-publish-guard.md +55 -0
- package/.opencode/mednotes/contracts/.gitkeep +1 -0
- package/.opencode/mednotes/contracts/agents.json +116 -0
- package/.opencode/mednotes/contracts/opencode-plugin.json +70 -0
- package/.opencode/mednotes/docs/agent-prompt-hardening.md +567 -0
- package/.opencode/mednotes/docs/agent-role-contracts.md +94 -0
- package/.opencode/mednotes/docs/anki-mcp-twenty-rules.md +214 -0
- package/.opencode/mednotes/docs/anki-templates/README.md +39 -0
- package/.opencode/mednotes/docs/anki-templates/cloze.back.html +23 -0
- package/.opencode/mednotes/docs/anki-templates/cloze.front.html +14 -0
- package/.opencode/mednotes/docs/anki-templates/qa.back.html +24 -0
- package/.opencode/mednotes/docs/anki-templates/qa.front.html +14 -0
- package/.opencode/mednotes/docs/anki-templates/style.css +182 -0
- package/.opencode/mednotes/docs/atomicity-splitting-policy.md +113 -0
- package/.opencode/mednotes/docs/extension-docs.md +40 -0
- package/.opencode/mednotes/docs/flashcard-ingestion.md +278 -0
- package/.opencode/mednotes/docs/knowledge-architect.md +208 -0
- package/.opencode/mednotes/docs/merge-policy.md +110 -0
- package/.opencode/mednotes/docs/public-vocabulary.md +104 -0
- package/.opencode/mednotes/docs/semantic-linker.md +141 -0
- package/.opencode/mednotes/docs/taxonomy-policy.md +90 -0
- package/.opencode/mednotes/docs/triage-policy.md +187 -0
- package/.opencode/mednotes/docs/vault-version-control.md +758 -0
- package/.opencode/mednotes/docs/vocabulary-db-recovery.md +58 -0
- package/.opencode/mednotes/docs/workflow-output-contract.md +779 -0
- package/.opencode/mednotes/hooks/hooks.json +79 -0
- package/.opencode/mednotes/package-lock.json +6361 -0
- package/.opencode/mednotes/package.json +15 -0
- package/.opencode/mednotes/pyproject.toml +48 -0
- package/.opencode/mednotes/scripts/bootstrap_windows_python_uv.cmd +13 -0
- package/.opencode/mednotes/scripts/bootstrap_windows_python_uv.ps1 +172 -0
- package/.opencode/mednotes/scripts/enrich_notes.py +23 -0
- package/.opencode/mednotes/scripts/full_reset_windows_python_uv.cmd +13 -0
- package/.opencode/mednotes/scripts/hooks/antigravity_hook_status.mjs +212 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/adapters/antigravity.mjs +169 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/adapters/harness_payload.mjs +103 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/adapters/opencode_plugin.mjs +341 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/adapters/opencode_user_config_sync.mjs +177 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/anki_preflight.mjs +214 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/cli.mjs +143 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/diagnostics.mjs +11 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/domain/agent_directive_core.mjs +160 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/fsm_directive.mjs +1470 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/hook_errors.mjs +120 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/retention.mjs +114 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/runtime.mjs +174 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/telemetry_capture.mjs +511 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook/vault_guard.mjs +624 -0
- package/.opencode/mednotes/scripts/hooks/mednotes_hook.mjs +5 -0
- package/.opencode/mednotes/scripts/mednotes/_runtime_paths.py +24 -0
- package/.opencode/mednotes/scripts/mednotes/anki_model_validator.py +18 -0
- package/.opencode/mednotes/scripts/mednotes/capture_extension_diff.py +1562 -0
- package/.opencode/mednotes/scripts/mednotes/feedback_report.py +16 -0
- package/.opencode/mednotes/scripts/mednotes/flashcard_index.py +18 -0
- package/.opencode/mednotes/scripts/mednotes/flashcard_pipeline.py +18 -0
- package/.opencode/mednotes/scripts/mednotes/flashcard_report.py +18 -0
- package/.opencode/mednotes/scripts/mednotes/flashcard_sources.py +18 -0
- package/.opencode/mednotes/scripts/mednotes/obsidian/README.md +6 -0
- package/.opencode/mednotes/scripts/mednotes/obsidian_note_utils.py +20 -0
- package/.opencode/mednotes/scripts/mednotes/pdf_library/cli.py +16 -0
- package/.opencode/mednotes/scripts/mednotes/project_fsm.py +229 -0
- package/.opencode/mednotes/scripts/mednotes/setup_telemetry_email.py +404 -0
- package/.opencode/mednotes/scripts/mednotes/sync_anki_twenty_rules.py +18 -0
- package/.opencode/mednotes/scripts/mednotes/sync_opencode_user_config.py +36 -0
- package/.opencode/mednotes/scripts/mednotes/wiki/cli.py +20 -0
- package/.opencode/mednotes/scripts/mednotes/wiki_graph.py +18 -0
- package/.opencode/mednotes/scripts/mednotes/wiki_tree.py +134 -0
- package/.opencode/mednotes/scripts/reset_windows_python_uv.ps1 +625 -0
- package/.opencode/mednotes/scripts/run_python.mjs +109 -0
- package/.opencode/mednotes/scripts/vault/vault_commit.ps1 +19 -0
- package/.opencode/mednotes/scripts/vault/vault_commit.sh +18 -0
- package/.opencode/mednotes/scripts/vault/vault_git.ps1 +19 -0
- package/.opencode/mednotes/scripts/vault/vault_git.py +3107 -0
- package/.opencode/mednotes/scripts/vault/vault_git.sh +18 -0
- package/.opencode/mednotes/scripts/vault/vault_precommit.ps1 +19 -0
- package/.opencode/mednotes/scripts/vault/vault_precommit.sh +18 -0
- package/.opencode/mednotes/skills/THIRD_PARTY_NOTICES.md +45 -0
- package/.opencode/mednotes/skills/create-medical-flashcards/SKILL.md +113 -0
- package/.opencode/mednotes/skills/create-medical-note/SKILL.md +90 -0
- package/.opencode/mednotes/skills/enrich-medical-note/SKILL.md +120 -0
- package/.opencode/mednotes/skills/fix-medical-wiki/SKILL.md +559 -0
- package/.opencode/mednotes/skills/link-medical-wiki/SKILL.md +224 -0
- package/.opencode/mednotes/skills/obsidian-cli/SKILL.md +118 -0
- package/.opencode/mednotes/skills/obsidian-markdown/SKILL.md +207 -0
- package/.opencode/mednotes/skills/obsidian-markdown/references/CALLOUTS.md +58 -0
- package/.opencode/mednotes/skills/obsidian-markdown/references/EMBEDS.md +63 -0
- package/.opencode/mednotes/skills/obsidian-markdown/references/PROPERTIES.md +61 -0
- package/.opencode/mednotes/skills/obsidian-ops/SKILL.md +136 -0
- package/.opencode/mednotes/skills/pdf-library/SKILL.md +45 -0
- package/.opencode/mednotes/skills/process-medical-chats/SKILL.md +246 -0
- package/.opencode/mednotes/skills/workflow-report/SKILL.md +100 -0
- package/.opencode/mednotes/src/mednotes/__init__.py +5 -0
- package/.opencode/mednotes/src/mednotes/domains/__init__.py +5 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/README.md +26 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/__init__.py +2 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/build_demo_apkg.py +177 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/contracts.py +385 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/flashcards_machine.py +522 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/fsm.py +817 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/index.py +630 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/install_models.py +445 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/model.py +359 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/obsidian_links.py +135 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/obsidian_note_utils.py +546 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/pipeline.py +580 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/report.py +510 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/sources.py +682 -0
- package/.opencode/mednotes/src/mednotes/domains/flashcards/sync_rules.py +184 -0
- package/.opencode/mednotes/src/mednotes/domains/history/__init__.py +1 -0
- package/.opencode/mednotes/src/mednotes/domains/history/history_fsm.py +852 -0
- package/.opencode/mednotes/src/mednotes/domains/history/history_machine.py +453 -0
- package/.opencode/mednotes/src/mednotes/domains/setup/__init__.py +7 -0
- package/.opencode/mednotes/src/mednotes/domains/setup/setup_fsm.py +808 -0
- package/.opencode/mednotes/src/mednotes/domains/setup/setup_machine.py +973 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/README.md +64 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/__init__.py +1 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/api.py +668 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/batch_state.py +102 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/__init__.py +1 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/atomicity/__init__.py +1 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/atomicity/atomicity.py +877 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/body_link/__init__.py +1 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/body_link/body_linker.py +1562 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/effects/__init__.py +1 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/effects/effect_adapters.py +949 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/effects/fix_wiki_runtime_adapters.py +433 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/graph/__init__.py +1 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/graph/coverage.py +413 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/graph/graph.py +396 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/graph/graph_fixes.py +161 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/hygiene/__init__.py +1 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/hygiene/hygiene.py +483 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/__init__.py +2 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/anchors.py +185 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/__init__.py +0 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/cache.py +223 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/config.py +131 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/download.py +224 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/frontmatter.py +59 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/insert.py +227 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/local_import.py +54 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/sources/__init__.py +42 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/sources/web_profiles.py +99 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/sources/web_search.py +203 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/sources/wikimedia.py +102 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/markdown/__init__.py +1 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/markdown/markdown_db_adapter.mjs +434 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/markdown/markdown_node_runtime.py +274 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/markdown/markdown_query.py +227 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/__init__.py +1 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/artifacts.py +605 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/canonical_merge.py +277 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/markdown_zones.py +85 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/meaning_planner.py +307 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_iter.py +67 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_merge.py +278 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_plan.py +409 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_policy.py +22 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/__init__.py +79 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/fixes.py +264 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/frontmatter.py +435 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/models.py +208 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/prompts.py +37 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/tables.py +236 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/validate.py +404 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/provenance.py +478 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/raw_chats.py +273 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/sources_backfill.py +235 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/__init__.py +10 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/anchors.py +16 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/captions.py +47 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/cli.py +179 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/cloud.py +52 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/config.py +196 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/context_packets.py +76 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/db.py +81 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/doctor.py +102 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/figure_ids.py +42 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/ingest.py +326 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/insert.py +316 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/mentions.py +57 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/ocr.py +71 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/paths.py +35 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/pdf_engine.py +77 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/schema.py +155 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/search.py +188 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/tui/__init__.py +1 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/tui/app.py +89 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/tui/image_backend.py +29 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/tui/state.py +65 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/publish/__init__.py +1 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/publish/publish.py +1139 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/publish/publish_receipts.py +365 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/publish/publish_recovery.py +240 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/__init__.py +1 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/agent_behavior_corpus.py +2069 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/agent_report_validation.py +4448 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/agent_run_audit.py +852 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/architect_prompt_eval.py +341 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/body_linker_eval.py +240 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/curator_output_validation.py +175 -0
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- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/quality/triager_prompt_eval.py +1295 -0
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- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/specialist/__init__.py +1 -0
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- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/subagents/__init__.py +1 -0
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- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/__init__.py +1 -0
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- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/llm_disambiguation.py +182 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/__init__.py +116 -0
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- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/normalize.py +72 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/policy.py +135 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/resolve.py +413 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/schema.py +157 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/taxonomy/status.py +137 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/vocabulary_bootstrap.py +509 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/vocabulary_curator_batch.py +1115 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/vocabulary_ingestion.py +632 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/vocabulary_map.py +930 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/vocabulary_recovery.py +1388 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/cli.py +6665 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/common.py +69 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/config.py +210 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/__init__.py +74 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/agent_report.py +242 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/agent_run_audit.py +196 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/agents.py +601 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/curator.py +256 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/effect_payloads.py +519 -0
- package/.opencode/mednotes/src/mednotes/domains/wiki/contracts/happy_path.py +190 -0
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- package/package.json +45 -0
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"""Operational StateChart for `/mednotes:link`.
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This is the target FSM for the link package. It intentionally uses operational
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leaf states for stale diagnosis, vocabulary bootstrap, agent work, external
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quota and human apply confirmation so the public state does not collapse into
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`status + blocked_reason` from the historical linker report.
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"""
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from __future__ import annotations
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from enum import StrEnum
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from typing import Annotated, Literal
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from pydantic import Field, TypeAdapter, field_validator, model_validator
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from statemachine import StateChart
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from statemachine.states import States
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from mednotes.domains.wiki.contracts.effect_payloads import (
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LinkWorkflowRunEffectPayload,
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LinkWorkflowRunKind,
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RelatedNotesExportEffectPayload,
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RelatedNotesRecoveryStateEffectPayload,
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WaitExternalEffectPayload,
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)
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from mednotes.kernel.base import ContractModel, JsonObject
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from mednotes.kernel.effect_intent import WorkflowEffect, WorkflowEffectKind
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from mednotes.kernel.fsm_model import WorkflowModel
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from mednotes.kernel.fsm_transition_result import WorkflowTransitionResult
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from mednotes.kernel.state_machine import WorkflowStateCategory
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from mednotes.kernel.workflow import (
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DecisionEvidence,
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HumanDecisionOption,
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HumanDecisionPacket,
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RejectedAutomation,
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WorkflowDecision,
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)
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LINK_WORKFLOW: Literal["/mednotes:link"] = "/mednotes:link"
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LINK_BODY_WORKFLOW: Literal["/mednotes:link-body"] = "/mednotes:link-body"
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LINK_PUBLIC_WORKFLOWS = frozenset({LINK_WORKFLOW, LINK_BODY_WORKFLOW})
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LINK_BODY_FORBIDDEN_EVENT_NAMES = frozenset(
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{
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"vocabulary_bootstrap_required",
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"vocabulary_bootstrap_completed",
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"related_notes_planned",
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"related_notes_apply_requested",
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"vocabulary_semantic_repair_planned",
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"vocabulary_semantic_repair_apply_requested",
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"vocabulary_curator_required",
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"vocabulary_curator_completed",
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"related_notes_export_recovered",
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"related_notes_quota_wait",
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"related_notes_quota_ready",
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"related_notes_applied",
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"vocabulary_semantic_repair_applied",
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}
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)
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class LinkMode(StrEnum):
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FULL = "full"
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BODY_ONLY = "body_only"
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class LinkState(StrEnum):
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CHECKING_TRIGGER_CONTEXT = "checking_trigger_context"
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DIAGNOSING_GRAPH = "diagnosing_graph"
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VOCABULARY_BOOTSTRAP_REQUIRED = "vocabulary_bootstrap_required"
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PLANNING_BODY_LINKS = "planning_body_links"
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PLANNING_RELATED_NOTES = "planning_related_notes"
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PLANNING_VOCABULARY_SEMANTIC_REPAIR = "planning_vocabulary_semantic_repair"
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WAITING_AGENT_DISAMBIGUATION = "waiting_agent_disambiguation"
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WAITING_AGENT_RELATED_NOTES_EXPORT_RECOVERY = "waiting_agent_related_notes_export_recovery"
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WAITING_AGENT_VOCABULARY_CURATOR = "waiting_agent_vocabulary_curator"
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WAITING_EXTERNAL_RELATED_NOTES_QUOTA = "waiting_external_related_notes_quota"
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WAITING_HUMAN_CONFIRMATION = "waiting_human_confirmation"
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APPLYING_BODY_LINKS = "applying_body_links"
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APPLYING_RELATED_NOTES = "applying_related_notes"
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APPLYING_VOCABULARY_SEMANTIC_REPAIR = "applying_vocabulary_semantic_repair"
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STALE_DIAGNOSIS = "stale_diagnosis"
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APPLY_CANCELLED = "apply_cancelled"
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GRAPH_DIAGNOSIS_BLOCKED = "graph_diagnosis_blocked"
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BODY_LINKS_BLOCKED = "body_links_blocked"
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RELATED_NOTES_BLOCKED = "related_notes_blocked"
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VOCABULARY_SEMANTIC_REPAIR_BLOCKED = "vocabulary_semantic_repair_blocked"
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COMPLETED = "completed"
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COMPLETED_WITH_LINK_BLOCKERS = "completed_with_link_blockers"
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FAILED = "failed"
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class LinkEvent(ContractModel):
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"""Base event accepted by the link StateChart."""
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workflow: str = LINK_WORKFLOW
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run_id: str = Field(min_length=1)
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current_state: str = Field(min_length=1)
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audit_evidence: JsonObject = Field(default_factory=dict)
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@field_validator("workflow")
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@classmethod
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def _workflow_must_be_link(cls, value: str) -> str:
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if value not in LINK_PUBLIC_WORKFLOWS:
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raise ValueError(f"link event workflow must be one of {sorted(LINK_PUBLIC_WORKFLOWS)}")
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return value
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@model_validator(mode="after")
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def _body_only_rejects_full_package_events(self) -> LinkEvent:
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event_name = _event_name(self)
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if self.workflow == LINK_BODY_WORKFLOW and event_name in LINK_BODY_FORBIDDEN_EVENT_NAMES:
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raise ValueError(f"{event_name} is not valid for {LINK_BODY_WORKFLOW}")
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return self
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def _event_name(event: LinkEvent) -> str:
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"""Return the concrete Literal discriminator declared by each event class."""
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name = getattr(event, "name", "")
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if not isinstance(name, str) or not name.strip():
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raise ValueError("link events must declare a name discriminator")
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return name
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+
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122
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+
|
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123
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+
class TriggerContextReadyEvent(LinkEvent):
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124
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+
name: Literal["trigger_context_ready"] = "trigger_context_ready"
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125
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+
trigger_context_path: str = Field(min_length=1)
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126
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+
|
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127
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+
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128
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+
class StaleDiagnosisEvent(LinkEvent):
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129
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+
name: Literal["stale_diagnosis"] = "stale_diagnosis"
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130
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+
reason_code: Literal["stale_diagnosis"]
|
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131
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+
|
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132
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+
|
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133
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+
class DiagnosisRefreshRequestedEvent(LinkEvent):
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134
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+
name: Literal["diagnosis_refresh_requested"] = "diagnosis_refresh_requested"
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135
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+
reason_code: Literal["stale_diagnosis"] = "stale_diagnosis"
|
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136
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+
|
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137
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+
|
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138
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+
class DiagnosisCleanEvent(LinkEvent):
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139
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+
name: Literal["diagnosis_clean"] = "diagnosis_clean"
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140
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+
changed_file_count: int = Field(default=0, ge=0, strict=True)
|
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141
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+
|
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142
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+
|
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143
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+
class DiagnosisCompletedWithLinkBlockersEvent(LinkEvent):
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144
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+
name: Literal["diagnosis_completed_with_link_blockers"] = "diagnosis_completed_with_link_blockers"
|
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145
|
+
blocker_count: int = Field(ge=1, strict=True)
|
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146
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+
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147
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+
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148
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+
class LinkRuntimeObservation(ContractModel):
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+
"""Adapter facts observed at the boundary; guards decide the leaf state."""
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150
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+
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151
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+
mode: LinkMode = LinkMode.FULL
|
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+
operation: Literal["diagnose", "apply"]
|
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+
failed: bool = False
|
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154
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+
stale_diagnosis: bool = False
|
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155
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+
changed_file_count: int = Field(default=0, ge=0, strict=True)
|
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156
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+
planned_link_count: int = Field(default=0, ge=0, strict=True)
|
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157
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+
rewritten_link_count: int = Field(default=0, ge=0, strict=True)
|
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158
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+
blocker_count: int = Field(default=0, ge=0, strict=True)
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159
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+
body_linker_blocked: bool = False
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160
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+
body_linker_blocked_reason: str = ""
|
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+
related_notes_present: bool = False
|
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162
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+
related_notes_blocked: bool = False
|
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163
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+
related_notes_export_recovery_required: bool = False
|
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+
related_notes_export_recovery_reason: str = ""
|
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165
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+
related_notes_waiting_external: bool = False
|
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+
related_notes_applied: bool = False
|
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+
vocabulary_bootstrap_required: bool = False
|
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|
+
vocabulary_curator_required: bool = False
|
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+
vocabulary_db_path: str = ""
|
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170
|
+
vocabulary_curator_batch_plan_path: str = ""
|
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171
|
+
vocabulary_curator_work_item_count: int = Field(default=1, ge=1, strict=True)
|
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172
|
+
next_action: str = ""
|
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173
|
+
reason_code: str = ""
|
|
174
|
+
related_notes_recovery_state: RelatedNotesRecoveryStateEffectPayload = Field(
|
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|
+
default_factory=RelatedNotesRecoveryStateEffectPayload
|
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176
|
+
)
|
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177
|
+
|
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178
|
+
|
|
179
|
+
class LinkRuntimeObservedEvent(LinkEvent):
|
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180
|
+
"""Single runtime observation event; LinkMachine owns outcome priority."""
|
|
181
|
+
|
|
182
|
+
name: Literal["runtime_observed"] = "runtime_observed"
|
|
183
|
+
observation: LinkRuntimeObservation
|
|
184
|
+
|
|
185
|
+
|
|
186
|
+
class VocabularyBootstrapRequiredEvent(LinkEvent):
|
|
187
|
+
name: Literal["vocabulary_bootstrap_required"] = "vocabulary_bootstrap_required"
|
|
188
|
+
db_path: str = Field(min_length=1)
|
|
189
|
+
|
|
190
|
+
|
|
191
|
+
class VocabularyBootstrapCompletedEvent(LinkEvent):
|
|
192
|
+
name: Literal["vocabulary_bootstrap_completed"] = "vocabulary_bootstrap_completed"
|
|
193
|
+
db_path: str = Field(min_length=1)
|
|
194
|
+
|
|
195
|
+
|
|
196
|
+
class BodyLinksPlannedEvent(LinkEvent):
|
|
197
|
+
name: Literal["body_links_planned"] = "body_links_planned"
|
|
198
|
+
planned_link_count: int = Field(ge=0, strict=True)
|
|
199
|
+
|
|
200
|
+
|
|
201
|
+
class BodyLinksReadyForConfirmationEvent(LinkEvent):
|
|
202
|
+
name: Literal["body_links_ready_for_confirmation"] = "body_links_ready_for_confirmation"
|
|
203
|
+
planned_link_count: int = Field(ge=0, strict=True)
|
|
204
|
+
|
|
205
|
+
|
|
206
|
+
class RelatedNotesPlannedEvent(LinkEvent):
|
|
207
|
+
name: Literal["related_notes_planned"] = "related_notes_planned"
|
|
208
|
+
planned_note_count: int = Field(ge=0, strict=True)
|
|
209
|
+
|
|
210
|
+
|
|
211
|
+
class RelatedNotesApplyRequestedEvent(LinkEvent):
|
|
212
|
+
name: Literal["related_notes_apply_requested"] = "related_notes_apply_requested"
|
|
213
|
+
planned_note_count: int = Field(ge=0, strict=True)
|
|
214
|
+
|
|
215
|
+
|
|
216
|
+
class VocabularySemanticRepairPlannedEvent(LinkEvent):
|
|
217
|
+
name: Literal["vocabulary_semantic_repair_planned"] = "vocabulary_semantic_repair_planned"
|
|
218
|
+
planned_repair_count: int = Field(ge=0, strict=True)
|
|
219
|
+
|
|
220
|
+
|
|
221
|
+
class VocabularySemanticRepairApplyRequestedEvent(LinkEvent):
|
|
222
|
+
name: Literal["vocabulary_semantic_repair_apply_requested"] = "vocabulary_semantic_repair_apply_requested"
|
|
223
|
+
planned_repair_count: int = Field(ge=0, strict=True)
|
|
224
|
+
|
|
225
|
+
|
|
226
|
+
class AgentDisambiguationRequiredEvent(LinkEvent):
|
|
227
|
+
name: Literal["agent_disambiguation_required"] = "agent_disambiguation_required"
|
|
228
|
+
ambiguous_alias_count: int = Field(ge=1, strict=True)
|
|
229
|
+
|
|
230
|
+
|
|
231
|
+
class AgentDisambiguationCompletedEvent(LinkEvent):
|
|
232
|
+
name: Literal["agent_disambiguation_completed"] = "agent_disambiguation_completed"
|
|
233
|
+
summary: str = Field(min_length=1)
|
|
234
|
+
|
|
235
|
+
|
|
236
|
+
class VocabularyCuratorRequiredEvent(LinkEvent):
|
|
237
|
+
name: Literal["vocabulary_curator_required"] = "vocabulary_curator_required"
|
|
238
|
+
work_item_count: int = Field(ge=1, strict=True)
|
|
239
|
+
batch_plan_path: str = ""
|
|
240
|
+
|
|
241
|
+
|
|
242
|
+
class VocabularyCuratorCompletedEvent(LinkEvent):
|
|
243
|
+
name: Literal["vocabulary_curator_completed"] = "vocabulary_curator_completed"
|
|
244
|
+
summary: str = Field(min_length=1)
|
|
245
|
+
|
|
246
|
+
|
|
247
|
+
class RelatedNotesQuotaWaitEvent(LinkEvent):
|
|
248
|
+
name: Literal["related_notes_quota_wait"] = "related_notes_quota_wait"
|
|
249
|
+
resume_action: str = Field(min_length=1)
|
|
250
|
+
related_notes_recovery_state: RelatedNotesRecoveryStateEffectPayload = Field(
|
|
251
|
+
default_factory=RelatedNotesRecoveryStateEffectPayload
|
|
252
|
+
)
|
|
253
|
+
|
|
254
|
+
@field_validator("related_notes_recovery_state", mode="before")
|
|
255
|
+
@classmethod
|
|
256
|
+
def _coerce_related_notes_recovery_state(cls, value: object) -> RelatedNotesRecoveryStateEffectPayload:
|
|
257
|
+
return RelatedNotesRecoveryStateEffectPayload.from_payload(value)
|
|
258
|
+
|
|
259
|
+
|
|
260
|
+
class RelatedNotesExportRecoveredEvent(LinkEvent):
|
|
261
|
+
name: Literal["related_notes_export_recovered"] = "related_notes_export_recovered"
|
|
262
|
+
summary: str = Field(min_length=1)
|
|
263
|
+
|
|
264
|
+
|
|
265
|
+
class RelatedNotesQuotaReadyEvent(LinkEvent):
|
|
266
|
+
name: Literal["related_notes_quota_ready"] = "related_notes_quota_ready"
|
|
267
|
+
restored_by: str = Field(min_length=1)
|
|
268
|
+
|
|
269
|
+
|
|
270
|
+
class HumanApplyApprovedEvent(LinkEvent):
|
|
271
|
+
name: Literal["human_apply_approved"] = "human_apply_approved"
|
|
272
|
+
approved_by: str = Field(min_length=1)
|
|
273
|
+
|
|
274
|
+
|
|
275
|
+
class HumanApplyCancelledEvent(LinkEvent):
|
|
276
|
+
name: Literal["human_apply_cancelled"] = "human_apply_cancelled"
|
|
277
|
+
cancelled_by: str = Field(min_length=1)
|
|
278
|
+
|
|
279
|
+
|
|
280
|
+
class BodyLinksAppliedEvent(LinkEvent):
|
|
281
|
+
name: Literal["body_links_applied"] = "body_links_applied"
|
|
282
|
+
changed_file_count: int = Field(ge=0, strict=True)
|
|
283
|
+
|
|
284
|
+
|
|
285
|
+
class RelatedNotesAppliedEvent(LinkEvent):
|
|
286
|
+
name: Literal["related_notes_applied"] = "related_notes_applied"
|
|
287
|
+
changed_file_count: int = Field(ge=0, strict=True)
|
|
288
|
+
|
|
289
|
+
|
|
290
|
+
class VocabularySemanticRepairAppliedEvent(LinkEvent):
|
|
291
|
+
name: Literal["vocabulary_semantic_repair_applied"] = "vocabulary_semantic_repair_applied"
|
|
292
|
+
changed_file_count: int = Field(ge=0, strict=True)
|
|
293
|
+
|
|
294
|
+
|
|
295
|
+
class LinkBlockedEvent(LinkEvent):
|
|
296
|
+
name: Literal["link_blocked"] = "link_blocked"
|
|
297
|
+
reason_code: str = Field(min_length=1)
|
|
298
|
+
next_action: str = Field(min_length=1)
|
|
299
|
+
|
|
300
|
+
|
|
301
|
+
class LinkFailedEvent(LinkEvent):
|
|
302
|
+
name: Literal["link_failed"] = "link_failed"
|
|
303
|
+
reason_code: str = Field(min_length=1)
|
|
304
|
+
next_action: str = Field(min_length=1)
|
|
305
|
+
|
|
306
|
+
|
|
307
|
+
LinkBoundaryEvent = Annotated[
|
|
308
|
+
TriggerContextReadyEvent
|
|
309
|
+
| StaleDiagnosisEvent
|
|
310
|
+
| DiagnosisRefreshRequestedEvent
|
|
311
|
+
| DiagnosisCleanEvent
|
|
312
|
+
| DiagnosisCompletedWithLinkBlockersEvent
|
|
313
|
+
| LinkRuntimeObservedEvent
|
|
314
|
+
| VocabularyBootstrapRequiredEvent
|
|
315
|
+
| VocabularyBootstrapCompletedEvent
|
|
316
|
+
| BodyLinksPlannedEvent
|
|
317
|
+
| BodyLinksReadyForConfirmationEvent
|
|
318
|
+
| RelatedNotesPlannedEvent
|
|
319
|
+
| RelatedNotesApplyRequestedEvent
|
|
320
|
+
| VocabularySemanticRepairPlannedEvent
|
|
321
|
+
| VocabularySemanticRepairApplyRequestedEvent
|
|
322
|
+
| AgentDisambiguationRequiredEvent
|
|
323
|
+
| AgentDisambiguationCompletedEvent
|
|
324
|
+
| VocabularyCuratorRequiredEvent
|
|
325
|
+
| VocabularyCuratorCompletedEvent
|
|
326
|
+
| RelatedNotesExportRecoveredEvent
|
|
327
|
+
| RelatedNotesQuotaWaitEvent
|
|
328
|
+
| RelatedNotesQuotaReadyEvent
|
|
329
|
+
| HumanApplyApprovedEvent
|
|
330
|
+
| HumanApplyCancelledEvent
|
|
331
|
+
| BodyLinksAppliedEvent
|
|
332
|
+
| RelatedNotesAppliedEvent
|
|
333
|
+
| VocabularySemanticRepairAppliedEvent
|
|
334
|
+
| LinkBlockedEvent
|
|
335
|
+
| LinkFailedEvent,
|
|
336
|
+
Field(discriminator="name"),
|
|
337
|
+
]
|
|
338
|
+
LinkBoundaryEventAdapter = TypeAdapter(LinkBoundaryEvent)
|
|
339
|
+
|
|
340
|
+
|
|
341
|
+
class LinkMachine(StateChart[WorkflowModel]):
|
|
342
|
+
"""Pure domain StateChart for link state and effect intents."""
|
|
343
|
+
|
|
344
|
+
allow_event_without_transition = False
|
|
345
|
+
catch_errors_as_events = False
|
|
346
|
+
states = States.from_enum(
|
|
347
|
+
LinkState,
|
|
348
|
+
initial=LinkState.CHECKING_TRIGGER_CONTEXT,
|
|
349
|
+
final={
|
|
350
|
+
LinkState.COMPLETED,
|
|
351
|
+
LinkState.COMPLETED_WITH_LINK_BLOCKERS,
|
|
352
|
+
LinkState.APPLY_CANCELLED,
|
|
353
|
+
LinkState.GRAPH_DIAGNOSIS_BLOCKED,
|
|
354
|
+
LinkState.BODY_LINKS_BLOCKED,
|
|
355
|
+
LinkState.RELATED_NOTES_BLOCKED,
|
|
356
|
+
LinkState.VOCABULARY_SEMANTIC_REPAIR_BLOCKED,
|
|
357
|
+
LinkState.FAILED,
|
|
358
|
+
},
|
|
359
|
+
use_enum_instance=False,
|
|
360
|
+
)
|
|
361
|
+
|
|
362
|
+
trigger_context_ready = states.CHECKING_TRIGGER_CONTEXT.to(states.DIAGNOSING_GRAPH, on="_on_diagnose")
|
|
363
|
+
stale_diagnosis = (
|
|
364
|
+
states.CHECKING_TRIGGER_CONTEXT.to(states.STALE_DIAGNOSIS, on="_on_blocked")
|
|
365
|
+
| states.DIAGNOSING_GRAPH.to(states.STALE_DIAGNOSIS, on="_on_blocked")
|
|
366
|
+
)
|
|
367
|
+
diagnosis_refresh_requested = states.STALE_DIAGNOSIS.to(states.DIAGNOSING_GRAPH, on="_on_diagnose")
|
|
368
|
+
diagnosis_clean = states.DIAGNOSING_GRAPH.to(states.COMPLETED, on="_on_completed")
|
|
369
|
+
diagnosis_completed_with_link_blockers = states.DIAGNOSING_GRAPH.to(
|
|
370
|
+
states.COMPLETED_WITH_LINK_BLOCKERS,
|
|
371
|
+
on="_on_completed",
|
|
372
|
+
)
|
|
373
|
+
runtime_observed = (
|
|
374
|
+
states.DIAGNOSING_GRAPH.to(states.FAILED, cond="_observed_failed", on="_on_runtime_failed")
|
|
375
|
+
| states.DIAGNOSING_GRAPH.to(
|
|
376
|
+
states.STALE_DIAGNOSIS,
|
|
377
|
+
cond="_observed_stale_diagnosis",
|
|
378
|
+
on="_on_runtime_blocked",
|
|
379
|
+
)
|
|
380
|
+
| states.DIAGNOSING_GRAPH.to(
|
|
381
|
+
states.WAITING_EXTERNAL_RELATED_NOTES_QUOTA,
|
|
382
|
+
cond="_observed_related_notes_quota",
|
|
383
|
+
on="_on_runtime_wait_external",
|
|
384
|
+
)
|
|
385
|
+
| states.DIAGNOSING_GRAPH.to(
|
|
386
|
+
states.VOCABULARY_BOOTSTRAP_REQUIRED,
|
|
387
|
+
cond="_observed_vocabulary_bootstrap_required",
|
|
388
|
+
on="_on_runtime_agent_required",
|
|
389
|
+
)
|
|
390
|
+
| states.DIAGNOSING_GRAPH.to(
|
|
391
|
+
states.WAITING_AGENT_VOCABULARY_CURATOR,
|
|
392
|
+
cond="_observed_vocabulary_curator_required",
|
|
393
|
+
on="_on_runtime_agent_required",
|
|
394
|
+
)
|
|
395
|
+
| states.DIAGNOSING_GRAPH.to(
|
|
396
|
+
states.WAITING_AGENT_RELATED_NOTES_EXPORT_RECOVERY,
|
|
397
|
+
cond="_observed_related_notes_export_recovery_required",
|
|
398
|
+
on="_on_runtime_agent_required",
|
|
399
|
+
)
|
|
400
|
+
| states.DIAGNOSING_GRAPH.to(
|
|
401
|
+
states.RELATED_NOTES_BLOCKED,
|
|
402
|
+
cond="_observed_related_notes_blocked",
|
|
403
|
+
on="_on_runtime_blocked",
|
|
404
|
+
)
|
|
405
|
+
| states.DIAGNOSING_GRAPH.to(
|
|
406
|
+
states.BODY_LINKS_BLOCKED,
|
|
407
|
+
cond="_observed_body_linker_blocked",
|
|
408
|
+
on="_on_runtime_blocked",
|
|
409
|
+
)
|
|
410
|
+
| states.DIAGNOSING_GRAPH.to(
|
|
411
|
+
states.COMPLETED_WITH_LINK_BLOCKERS,
|
|
412
|
+
cond="_observed_completed_with_warnings",
|
|
413
|
+
on="_on_completed",
|
|
414
|
+
)
|
|
415
|
+
| states.DIAGNOSING_GRAPH.to(
|
|
416
|
+
states.COMPLETED,
|
|
417
|
+
cond="_observed_completed",
|
|
418
|
+
on="_on_completed",
|
|
419
|
+
)
|
|
420
|
+
)
|
|
421
|
+
|
|
422
|
+
vocabulary_bootstrap_required = states.DIAGNOSING_GRAPH.to(
|
|
423
|
+
states.VOCABULARY_BOOTSTRAP_REQUIRED,
|
|
424
|
+
on="_on_agent_required",
|
|
425
|
+
)
|
|
426
|
+
vocabulary_bootstrap_completed = states.VOCABULARY_BOOTSTRAP_REQUIRED.to(
|
|
427
|
+
states.DIAGNOSING_GRAPH,
|
|
428
|
+
on="_on_transition",
|
|
429
|
+
)
|
|
430
|
+
body_links_planned = states.DIAGNOSING_GRAPH.to(states.PLANNING_BODY_LINKS, on="_on_transition")
|
|
431
|
+
body_links_ready_for_confirmation = states.PLANNING_BODY_LINKS.to(
|
|
432
|
+
states.WAITING_HUMAN_CONFIRMATION,
|
|
433
|
+
on="_on_human_confirmation",
|
|
434
|
+
)
|
|
435
|
+
related_notes_planned = states.DIAGNOSING_GRAPH.to(states.PLANNING_RELATED_NOTES, on="_on_transition")
|
|
436
|
+
related_notes_apply_requested = states.PLANNING_RELATED_NOTES.to(
|
|
437
|
+
states.APPLYING_RELATED_NOTES,
|
|
438
|
+
on="_on_apply_related_notes",
|
|
439
|
+
)
|
|
440
|
+
vocabulary_semantic_repair_planned = states.DIAGNOSING_GRAPH.to(
|
|
441
|
+
states.PLANNING_VOCABULARY_SEMANTIC_REPAIR,
|
|
442
|
+
on="_on_transition",
|
|
443
|
+
)
|
|
444
|
+
vocabulary_semantic_repair_apply_requested = states.PLANNING_VOCABULARY_SEMANTIC_REPAIR.to(
|
|
445
|
+
states.APPLYING_VOCABULARY_SEMANTIC_REPAIR,
|
|
446
|
+
on="_on_apply_vocabulary_semantic_repair",
|
|
447
|
+
)
|
|
448
|
+
agent_disambiguation_required = states.DIAGNOSING_GRAPH.to(
|
|
449
|
+
states.WAITING_AGENT_DISAMBIGUATION,
|
|
450
|
+
on="_on_agent_required",
|
|
451
|
+
)
|
|
452
|
+
agent_disambiguation_completed = states.WAITING_AGENT_DISAMBIGUATION.to(
|
|
453
|
+
states.DIAGNOSING_GRAPH,
|
|
454
|
+
on="_on_transition",
|
|
455
|
+
)
|
|
456
|
+
vocabulary_curator_required = states.DIAGNOSING_GRAPH.to(
|
|
457
|
+
states.WAITING_AGENT_VOCABULARY_CURATOR,
|
|
458
|
+
on="_on_agent_required",
|
|
459
|
+
)
|
|
460
|
+
vocabulary_curator_completed = states.WAITING_AGENT_VOCABULARY_CURATOR.to(
|
|
461
|
+
states.DIAGNOSING_GRAPH,
|
|
462
|
+
on="_on_transition",
|
|
463
|
+
)
|
|
464
|
+
related_notes_export_recovered = states.WAITING_AGENT_RELATED_NOTES_EXPORT_RECOVERY.to(
|
|
465
|
+
states.DIAGNOSING_GRAPH,
|
|
466
|
+
on="_on_transition",
|
|
467
|
+
)
|
|
468
|
+
|
|
469
|
+
related_notes_quota_wait = (
|
|
470
|
+
states.DIAGNOSING_GRAPH.to(states.WAITING_EXTERNAL_RELATED_NOTES_QUOTA, on="_on_wait_external")
|
|
471
|
+
| states.PLANNING_RELATED_NOTES.to(states.WAITING_EXTERNAL_RELATED_NOTES_QUOTA, on="_on_wait_external")
|
|
472
|
+
)
|
|
473
|
+
related_notes_quota_ready = states.WAITING_EXTERNAL_RELATED_NOTES_QUOTA.to(
|
|
474
|
+
states.DIAGNOSING_GRAPH,
|
|
475
|
+
on="_on_transition",
|
|
476
|
+
)
|
|
477
|
+
|
|
478
|
+
human_apply_approved = states.WAITING_HUMAN_CONFIRMATION.to(states.APPLYING_BODY_LINKS, on="_on_apply_body_links")
|
|
479
|
+
human_apply_cancelled = states.WAITING_HUMAN_CONFIRMATION.to(states.APPLY_CANCELLED, on="_on_blocked")
|
|
480
|
+
body_links_applied = states.APPLYING_BODY_LINKS.to(states.COMPLETED, on="_on_completed")
|
|
481
|
+
related_notes_applied = states.APPLYING_RELATED_NOTES.to(states.COMPLETED, on="_on_completed")
|
|
482
|
+
vocabulary_semantic_repair_applied = states.APPLYING_VOCABULARY_SEMANTIC_REPAIR.to(
|
|
483
|
+
states.COMPLETED,
|
|
484
|
+
on="_on_completed",
|
|
485
|
+
)
|
|
486
|
+
link_blocked = (
|
|
487
|
+
states.DIAGNOSING_GRAPH.to(states.GRAPH_DIAGNOSIS_BLOCKED, on="_on_blocked")
|
|
488
|
+
| states.PLANNING_BODY_LINKS.to(states.BODY_LINKS_BLOCKED, on="_on_blocked")
|
|
489
|
+
| states.APPLYING_BODY_LINKS.to(states.BODY_LINKS_BLOCKED, on="_on_blocked")
|
|
490
|
+
| states.PLANNING_RELATED_NOTES.to(states.RELATED_NOTES_BLOCKED, on="_on_blocked")
|
|
491
|
+
| states.APPLYING_RELATED_NOTES.to(states.RELATED_NOTES_BLOCKED, on="_on_blocked")
|
|
492
|
+
| states.PLANNING_VOCABULARY_SEMANTIC_REPAIR.to(
|
|
493
|
+
states.VOCABULARY_SEMANTIC_REPAIR_BLOCKED,
|
|
494
|
+
on="_on_blocked",
|
|
495
|
+
)
|
|
496
|
+
| states.APPLYING_VOCABULARY_SEMANTIC_REPAIR.to(
|
|
497
|
+
states.VOCABULARY_SEMANTIC_REPAIR_BLOCKED,
|
|
498
|
+
on="_on_blocked",
|
|
499
|
+
)
|
|
500
|
+
)
|
|
501
|
+
link_failed = (
|
|
502
|
+
states.DIAGNOSING_GRAPH.to(states.FAILED, on="_on_failed")
|
|
503
|
+
| states.APPLYING_BODY_LINKS.to(states.FAILED, on="_on_failed")
|
|
504
|
+
| states.APPLYING_RELATED_NOTES.to(states.FAILED, on="_on_failed")
|
|
505
|
+
| states.APPLYING_VOCABULARY_SEMANTIC_REPAIR.to(states.FAILED, on="_on_failed")
|
|
506
|
+
)
|
|
507
|
+
|
|
508
|
+
def category_for_state(self, state: str) -> WorkflowStateCategory:
|
|
509
|
+
return category_for_link_state(LinkState(state))
|
|
510
|
+
|
|
511
|
+
def _on_transition(self, workflow_event: LinkEvent, target: object) -> WorkflowTransitionResult:
|
|
512
|
+
return _transition(workflow_event, _target_state(target))
|
|
513
|
+
|
|
514
|
+
def _on_diagnose(self, workflow_event: LinkEvent, target: object) -> WorkflowTransitionResult:
|
|
515
|
+
to_state = _target_state(target)
|
|
516
|
+
return _transition(workflow_event, to_state, effects=[_link_effect(workflow_event, to_state)])
|
|
517
|
+
|
|
518
|
+
def _on_agent_required(self, workflow_event: LinkEvent, target: object) -> WorkflowTransitionResult:
|
|
519
|
+
to_state = _target_state(target)
|
|
520
|
+
return _transition(
|
|
521
|
+
workflow_event,
|
|
522
|
+
to_state,
|
|
523
|
+
reason_code=str(getattr(workflow_event, "reason_code", _event_name(workflow_event))),
|
|
524
|
+
effects=[_agent_required_effect(workflow_event, to_state)],
|
|
525
|
+
resume_action=_resume_action_for_link_state(to_state),
|
|
526
|
+
)
|
|
527
|
+
|
|
528
|
+
def _on_wait_external(self, workflow_event: RelatedNotesQuotaWaitEvent, target: object) -> WorkflowTransitionResult:
|
|
529
|
+
to_state = _target_state(target)
|
|
530
|
+
return _transition(
|
|
531
|
+
workflow_event,
|
|
532
|
+
to_state,
|
|
533
|
+
reason_code="related_notes_quota_wait",
|
|
534
|
+
effects=[_wait_external_effect(workflow_event, to_state)],
|
|
535
|
+
resume_action=workflow_event.resume_action,
|
|
536
|
+
)
|
|
537
|
+
|
|
538
|
+
def _on_human_confirmation(self, workflow_event: LinkEvent, target: object) -> WorkflowTransitionResult:
|
|
539
|
+
to_state = _target_state(target)
|
|
540
|
+
return _human_transition(workflow_event, to_state, reason_code="link_apply_confirmation_required")
|
|
541
|
+
|
|
542
|
+
def _on_apply_body_links(self, workflow_event: LinkEvent, target: object) -> WorkflowTransitionResult:
|
|
543
|
+
to_state = _target_state(target)
|
|
544
|
+
return _transition(
|
|
545
|
+
workflow_event,
|
|
546
|
+
to_state,
|
|
547
|
+
effects=[_link_effect(workflow_event, to_state)],
|
|
548
|
+
resume_action=_resume_action_for_link_state(to_state),
|
|
549
|
+
)
|
|
550
|
+
|
|
551
|
+
def _on_apply_related_notes(self, workflow_event: LinkEvent, target: object) -> WorkflowTransitionResult:
|
|
552
|
+
to_state = _target_state(target)
|
|
553
|
+
return _transition(
|
|
554
|
+
workflow_event,
|
|
555
|
+
to_state,
|
|
556
|
+
effects=[_link_effect(workflow_event, to_state)],
|
|
557
|
+
resume_action=_resume_action_for_link_state(to_state),
|
|
558
|
+
)
|
|
559
|
+
|
|
560
|
+
def _on_apply_vocabulary_semantic_repair(
|
|
561
|
+
self,
|
|
562
|
+
workflow_event: LinkEvent,
|
|
563
|
+
target: object,
|
|
564
|
+
) -> WorkflowTransitionResult:
|
|
565
|
+
to_state = _target_state(target)
|
|
566
|
+
return _transition(
|
|
567
|
+
workflow_event,
|
|
568
|
+
to_state,
|
|
569
|
+
effects=[_link_effect(workflow_event, to_state)],
|
|
570
|
+
resume_action=_resume_action_for_link_state(to_state),
|
|
571
|
+
)
|
|
572
|
+
|
|
573
|
+
def _on_blocked(self, workflow_event: LinkEvent, target: object) -> WorkflowTransitionResult:
|
|
574
|
+
to_state = _target_state(target)
|
|
575
|
+
reason_code = str(getattr(workflow_event, "reason_code", to_state.value))
|
|
576
|
+
next_action = str(getattr(workflow_event, "next_action", "")) or _resume_action_for_link_state(to_state)
|
|
577
|
+
return _transition(
|
|
578
|
+
workflow_event,
|
|
579
|
+
to_state,
|
|
580
|
+
reason_code=reason_code,
|
|
581
|
+
decision=_decision(kind="hard_block", phase=to_state.value, reason_code=reason_code, next_action=next_action),
|
|
582
|
+
resume_action=next_action,
|
|
583
|
+
)
|
|
584
|
+
|
|
585
|
+
def _on_failed(self, workflow_event: LinkEvent, target: object) -> WorkflowTransitionResult:
|
|
586
|
+
to_state = _target_state(target)
|
|
587
|
+
reason_code = str(getattr(workflow_event, "reason_code", to_state.value))
|
|
588
|
+
next_action = str(getattr(workflow_event, "next_action", "")) or "Retomar pelo diagnostico oficial de links."
|
|
589
|
+
return _transition(
|
|
590
|
+
workflow_event,
|
|
591
|
+
to_state,
|
|
592
|
+
reason_code=reason_code,
|
|
593
|
+
decision=_decision(kind="failed", phase=to_state.value, reason_code=reason_code, next_action=next_action),
|
|
594
|
+
)
|
|
595
|
+
|
|
596
|
+
def _on_completed(self, workflow_event: LinkEvent, target: object) -> WorkflowTransitionResult:
|
|
597
|
+
return _transition(workflow_event, _target_state(target))
|
|
598
|
+
|
|
599
|
+
def _on_runtime_agent_required(
|
|
600
|
+
self,
|
|
601
|
+
workflow_event: LinkRuntimeObservedEvent,
|
|
602
|
+
target: object,
|
|
603
|
+
) -> WorkflowTransitionResult:
|
|
604
|
+
to_state = _target_state(target)
|
|
605
|
+
return _transition(
|
|
606
|
+
workflow_event,
|
|
607
|
+
to_state,
|
|
608
|
+
reason_code=_runtime_reason_code(workflow_event, to_state),
|
|
609
|
+
effects=[_agent_required_effect(workflow_event, to_state)],
|
|
610
|
+
resume_action=_resume_action_for_link_state(to_state),
|
|
611
|
+
)
|
|
612
|
+
|
|
613
|
+
def _on_runtime_wait_external(
|
|
614
|
+
self,
|
|
615
|
+
workflow_event: LinkRuntimeObservedEvent,
|
|
616
|
+
target: object,
|
|
617
|
+
) -> WorkflowTransitionResult:
|
|
618
|
+
to_state = _target_state(target)
|
|
619
|
+
next_action = workflow_event.observation.next_action or _resume_action_for_link_state(to_state)
|
|
620
|
+
return _transition(
|
|
621
|
+
workflow_event,
|
|
622
|
+
to_state,
|
|
623
|
+
reason_code="related_notes_quota_wait",
|
|
624
|
+
effects=[_wait_external_effect(workflow_event, to_state)],
|
|
625
|
+
resume_action=next_action,
|
|
626
|
+
)
|
|
627
|
+
|
|
628
|
+
def _on_runtime_blocked(
|
|
629
|
+
self,
|
|
630
|
+
workflow_event: LinkRuntimeObservedEvent,
|
|
631
|
+
target: object,
|
|
632
|
+
) -> WorkflowTransitionResult:
|
|
633
|
+
to_state = _target_state(target)
|
|
634
|
+
reason_code = _runtime_reason_code(workflow_event, to_state)
|
|
635
|
+
next_action = workflow_event.observation.next_action or _resume_action_for_link_state(to_state)
|
|
636
|
+
return _transition(
|
|
637
|
+
workflow_event,
|
|
638
|
+
to_state,
|
|
639
|
+
reason_code=reason_code,
|
|
640
|
+
decision=_decision(kind="hard_block", phase=to_state.value, reason_code=reason_code, next_action=next_action),
|
|
641
|
+
resume_action=next_action,
|
|
642
|
+
)
|
|
643
|
+
|
|
644
|
+
def _on_runtime_failed(
|
|
645
|
+
self,
|
|
646
|
+
workflow_event: LinkRuntimeObservedEvent,
|
|
647
|
+
target: object,
|
|
648
|
+
) -> WorkflowTransitionResult:
|
|
649
|
+
to_state = _target_state(target)
|
|
650
|
+
reason_code = _runtime_reason_code(workflow_event, to_state)
|
|
651
|
+
next_action = workflow_event.observation.next_action or "Retomar pelo diagnostico oficial de links."
|
|
652
|
+
return _transition(
|
|
653
|
+
workflow_event,
|
|
654
|
+
to_state,
|
|
655
|
+
reason_code=reason_code,
|
|
656
|
+
decision=_decision(kind="failed", phase=to_state.value, reason_code=reason_code, next_action=next_action),
|
|
657
|
+
)
|
|
658
|
+
|
|
659
|
+
def _observed_failed(self, workflow_event: LinkRuntimeObservedEvent) -> bool:
|
|
660
|
+
observation = workflow_event.observation
|
|
661
|
+
return observation.failed or (
|
|
662
|
+
observation.mode == LinkMode.BODY_ONLY
|
|
663
|
+
and (
|
|
664
|
+
observation.related_notes_waiting_external
|
|
665
|
+
or observation.related_notes_blocked
|
|
666
|
+
or observation.related_notes_export_recovery_required
|
|
667
|
+
or observation.related_notes_applied
|
|
668
|
+
)
|
|
669
|
+
)
|
|
670
|
+
|
|
671
|
+
def _observed_stale_diagnosis(self, workflow_event: LinkRuntimeObservedEvent) -> bool:
|
|
672
|
+
return workflow_event.observation.stale_diagnosis
|
|
673
|
+
|
|
674
|
+
def _observed_related_notes_quota(self, workflow_event: LinkRuntimeObservedEvent) -> bool:
|
|
675
|
+
observation = workflow_event.observation
|
|
676
|
+
return observation.mode == LinkMode.FULL and observation.related_notes_waiting_external
|
|
677
|
+
|
|
678
|
+
def _observed_related_notes_export_recovery_required(self, workflow_event: LinkRuntimeObservedEvent) -> bool:
|
|
679
|
+
observation = workflow_event.observation
|
|
680
|
+
return observation.mode == LinkMode.FULL and observation.related_notes_export_recovery_required
|
|
681
|
+
|
|
682
|
+
def _observed_vocabulary_bootstrap_required(self, workflow_event: LinkRuntimeObservedEvent) -> bool:
|
|
683
|
+
return workflow_event.observation.vocabulary_bootstrap_required
|
|
684
|
+
|
|
685
|
+
def _observed_vocabulary_curator_required(self, workflow_event: LinkRuntimeObservedEvent) -> bool:
|
|
686
|
+
return workflow_event.observation.vocabulary_curator_required
|
|
687
|
+
|
|
688
|
+
def _observed_related_notes_blocked(self, workflow_event: LinkRuntimeObservedEvent) -> bool:
|
|
689
|
+
observation = workflow_event.observation
|
|
690
|
+
return observation.mode == LinkMode.FULL and observation.related_notes_blocked
|
|
691
|
+
|
|
692
|
+
def _observed_body_linker_blocked(self, workflow_event: LinkRuntimeObservedEvent) -> bool:
|
|
693
|
+
observation = workflow_event.observation
|
|
694
|
+
return observation.body_linker_blocked or observation.blocker_count > 0
|
|
695
|
+
|
|
696
|
+
def _observed_completed_with_warnings(self, workflow_event: LinkRuntimeObservedEvent) -> bool:
|
|
697
|
+
observation = workflow_event.observation
|
|
698
|
+
return observation.blocker_count > 0 and not observation.rewritten_link_count
|
|
699
|
+
|
|
700
|
+
def _observed_completed(self, workflow_event: LinkRuntimeObservedEvent) -> bool:
|
|
701
|
+
return not self._observed_failed(workflow_event)
|
|
702
|
+
|
|
703
|
+
|
|
704
|
+
def category_for_link_state(state: LinkState) -> WorkflowStateCategory:
|
|
705
|
+
"""Map each link leaf state to the public workflow category."""
|
|
706
|
+
|
|
707
|
+
match state:
|
|
708
|
+
case (
|
|
709
|
+
LinkState.CHECKING_TRIGGER_CONTEXT
|
|
710
|
+
| LinkState.DIAGNOSING_GRAPH
|
|
711
|
+
| LinkState.PLANNING_BODY_LINKS
|
|
712
|
+
| LinkState.PLANNING_RELATED_NOTES
|
|
713
|
+
| LinkState.PLANNING_VOCABULARY_SEMANTIC_REPAIR
|
|
714
|
+
| LinkState.APPLYING_BODY_LINKS
|
|
715
|
+
| LinkState.APPLYING_RELATED_NOTES
|
|
716
|
+
| LinkState.APPLYING_VOCABULARY_SEMANTIC_REPAIR
|
|
717
|
+
):
|
|
718
|
+
return WorkflowStateCategory.RUNNING
|
|
719
|
+
case (
|
|
720
|
+
LinkState.VOCABULARY_BOOTSTRAP_REQUIRED
|
|
721
|
+
| LinkState.WAITING_AGENT_DISAMBIGUATION
|
|
722
|
+
| LinkState.WAITING_AGENT_RELATED_NOTES_EXPORT_RECOVERY
|
|
723
|
+
| LinkState.WAITING_AGENT_VOCABULARY_CURATOR
|
|
724
|
+
):
|
|
725
|
+
return WorkflowStateCategory.WAITING_AGENT
|
|
726
|
+
case LinkState.WAITING_EXTERNAL_RELATED_NOTES_QUOTA:
|
|
727
|
+
return WorkflowStateCategory.WAITING_EXTERNAL
|
|
728
|
+
case LinkState.WAITING_HUMAN_CONFIRMATION:
|
|
729
|
+
return WorkflowStateCategory.WAITING_HUMAN
|
|
730
|
+
case (
|
|
731
|
+
LinkState.STALE_DIAGNOSIS
|
|
732
|
+
| LinkState.APPLY_CANCELLED
|
|
733
|
+
| LinkState.GRAPH_DIAGNOSIS_BLOCKED
|
|
734
|
+
| LinkState.BODY_LINKS_BLOCKED
|
|
735
|
+
| LinkState.RELATED_NOTES_BLOCKED
|
|
736
|
+
| LinkState.VOCABULARY_SEMANTIC_REPAIR_BLOCKED
|
|
737
|
+
):
|
|
738
|
+
return WorkflowStateCategory.BLOCKED
|
|
739
|
+
case LinkState.FAILED:
|
|
740
|
+
return WorkflowStateCategory.FAILED
|
|
741
|
+
case LinkState.COMPLETED:
|
|
742
|
+
return WorkflowStateCategory.COMPLETED
|
|
743
|
+
case LinkState.COMPLETED_WITH_LINK_BLOCKERS:
|
|
744
|
+
return WorkflowStateCategory.COMPLETED_WITH_WARNINGS
|
|
745
|
+
|
|
746
|
+
|
|
747
|
+
def _transition(
|
|
748
|
+
workflow_event: LinkEvent,
|
|
749
|
+
to_state: LinkState,
|
|
750
|
+
*,
|
|
751
|
+
reason_code: str | None = None,
|
|
752
|
+
effects: list[WorkflowEffect] | None = None,
|
|
753
|
+
decision: WorkflowDecision | None = None,
|
|
754
|
+
human_decision_packet: HumanDecisionPacket | None = None,
|
|
755
|
+
resume_action: str = "",
|
|
756
|
+
) -> WorkflowTransitionResult:
|
|
757
|
+
return WorkflowTransitionResult(
|
|
758
|
+
workflow=workflow_event.workflow,
|
|
759
|
+
run_id=workflow_event.run_id,
|
|
760
|
+
from_state=workflow_event.current_state,
|
|
761
|
+
to_state=to_state.value,
|
|
762
|
+
trigger=_event_name(workflow_event),
|
|
763
|
+
reason_code=reason_code or str(getattr(workflow_event, "reason_code", _event_name(workflow_event))),
|
|
764
|
+
effects=list(effects or []),
|
|
765
|
+
decision=decision,
|
|
766
|
+
human_decision_packet=human_decision_packet,
|
|
767
|
+
resume_action=resume_action,
|
|
768
|
+
)
|
|
769
|
+
|
|
770
|
+
|
|
771
|
+
def _target_state(target: object) -> LinkState:
|
|
772
|
+
"""Read the python-statemachine transition target without touching IO."""
|
|
773
|
+
|
|
774
|
+
value = getattr(target, "value", target)
|
|
775
|
+
return LinkState(str(value))
|
|
776
|
+
|
|
777
|
+
|
|
778
|
+
def _agent_required_effect(workflow_event: LinkEvent, origin_state: LinkState) -> WorkflowEffect:
|
|
779
|
+
"""Emit the effect selected by the LinkMachine waiting-agent state."""
|
|
780
|
+
|
|
781
|
+
if origin_state == LinkState.WAITING_AGENT_RELATED_NOTES_EXPORT_RECOVERY:
|
|
782
|
+
return _related_notes_export_recovery_effect(workflow_event, origin_state)
|
|
783
|
+
return _link_effect(workflow_event, origin_state)
|
|
784
|
+
|
|
785
|
+
|
|
786
|
+
def _related_notes_export_recovery_effect(workflow_event: LinkEvent, origin_state: LinkState) -> WorkflowEffect:
|
|
787
|
+
reason_code = str(getattr(workflow_event, "reason_code", "")) or origin_state.value
|
|
788
|
+
if isinstance(workflow_event, LinkRuntimeObservedEvent):
|
|
789
|
+
reason_code = workflow_event.observation.related_notes_export_recovery_reason or _runtime_reason_code(
|
|
790
|
+
workflow_event,
|
|
791
|
+
origin_state,
|
|
792
|
+
)
|
|
793
|
+
payload = RelatedNotesExportEffectPayload(mode="auto", reason_code=reason_code).to_payload()
|
|
794
|
+
return WorkflowEffect(
|
|
795
|
+
workflow=workflow_event.workflow,
|
|
796
|
+
run_id=workflow_event.run_id,
|
|
797
|
+
effect_id="link-related-notes-export-recovery",
|
|
798
|
+
origin_state=origin_state.value,
|
|
799
|
+
kind=WorkflowEffectKind.RUN_SUBWORKFLOW,
|
|
800
|
+
target="related_notes.export",
|
|
801
|
+
payload=payload,
|
|
802
|
+
requires_receipt=False,
|
|
803
|
+
no_resource_mutation=True,
|
|
804
|
+
resume_action=_resume_action_for_link_state(origin_state),
|
|
805
|
+
)
|
|
806
|
+
|
|
807
|
+
|
|
808
|
+
def _link_effect(workflow_event: LinkEvent, origin_state: LinkState) -> WorkflowEffect:
|
|
809
|
+
target, payload_kind = _effect_contract_for_state(origin_state)
|
|
810
|
+
if workflow_event.workflow == LINK_BODY_WORKFLOW:
|
|
811
|
+
if origin_state not in {LinkState.DIAGNOSING_GRAPH, LinkState.APPLYING_BODY_LINKS}:
|
|
812
|
+
raise ValueError(f"{origin_state.value} is not executable for {LINK_BODY_WORKFLOW}")
|
|
813
|
+
target = LINK_BODY_WORKFLOW
|
|
814
|
+
return WorkflowEffect(
|
|
815
|
+
workflow=workflow_event.workflow,
|
|
816
|
+
run_id=workflow_event.run_id,
|
|
817
|
+
effect_id=f"link-{origin_state.value.replace('_', '-')}",
|
|
818
|
+
origin_state=origin_state.value,
|
|
819
|
+
kind=WorkflowEffectKind.RUN_SUBWORKFLOW,
|
|
820
|
+
target=target,
|
|
821
|
+
payload=_link_effect_payload(workflow_event, payload_kind=payload_kind),
|
|
822
|
+
mutates_resources=origin_state
|
|
823
|
+
in {
|
|
824
|
+
LinkState.APPLYING_BODY_LINKS,
|
|
825
|
+
LinkState.APPLYING_RELATED_NOTES,
|
|
826
|
+
LinkState.APPLYING_VOCABULARY_SEMANTIC_REPAIR,
|
|
827
|
+
},
|
|
828
|
+
rollback_declared=origin_state
|
|
829
|
+
in {
|
|
830
|
+
LinkState.APPLYING_BODY_LINKS,
|
|
831
|
+
LinkState.APPLYING_RELATED_NOTES,
|
|
832
|
+
LinkState.APPLYING_VOCABULARY_SEMANTIC_REPAIR,
|
|
833
|
+
},
|
|
834
|
+
requires_receipt=False,
|
|
835
|
+
no_resource_mutation=origin_state
|
|
836
|
+
not in {
|
|
837
|
+
LinkState.APPLYING_BODY_LINKS,
|
|
838
|
+
LinkState.APPLYING_RELATED_NOTES,
|
|
839
|
+
LinkState.APPLYING_VOCABULARY_SEMANTIC_REPAIR,
|
|
840
|
+
},
|
|
841
|
+
)
|
|
842
|
+
|
|
843
|
+
|
|
844
|
+
def _link_effect_payload(workflow_event: LinkEvent, *, payload_kind: LinkWorkflowRunKind) -> JsonObject:
|
|
845
|
+
"""Project typed event fields that the adapter/agent needs to execute the effect."""
|
|
846
|
+
|
|
847
|
+
apply_requested = payload_kind.startswith("apply_")
|
|
848
|
+
payload = LinkWorkflowRunEffectPayload(
|
|
849
|
+
kind=payload_kind,
|
|
850
|
+
diagnose=not apply_requested,
|
|
851
|
+
apply=apply_requested,
|
|
852
|
+
diagnosis_path=str(getattr(workflow_event, "diagnosis_path", "")),
|
|
853
|
+
receipt_path=str(getattr(workflow_event, "receipt_path", "")),
|
|
854
|
+
no_related_notes=workflow_event.workflow == LINK_BODY_WORKFLOW,
|
|
855
|
+
).to_payload()
|
|
856
|
+
if isinstance(workflow_event, VocabularyBootstrapRequiredEvent):
|
|
857
|
+
payload["db_path"] = workflow_event.db_path
|
|
858
|
+
if isinstance(workflow_event, VocabularyCuratorRequiredEvent):
|
|
859
|
+
payload["work_item_count"] = workflow_event.work_item_count
|
|
860
|
+
if workflow_event.batch_plan_path:
|
|
861
|
+
payload["batch_plan_path"] = workflow_event.batch_plan_path
|
|
862
|
+
if isinstance(workflow_event, LinkRuntimeObservedEvent):
|
|
863
|
+
observation = workflow_event.observation
|
|
864
|
+
if payload_kind == "vocabulary_bootstrap":
|
|
865
|
+
if not observation.vocabulary_db_path.strip():
|
|
866
|
+
raise ValueError("vocabulary_bootstrap effect requires vocabulary_db_path")
|
|
867
|
+
payload["db_path"] = observation.vocabulary_db_path
|
|
868
|
+
if payload_kind == "vocabulary_curator":
|
|
869
|
+
payload["work_item_count"] = observation.vocabulary_curator_work_item_count
|
|
870
|
+
if observation.vocabulary_curator_batch_plan_path:
|
|
871
|
+
payload["batch_plan_path"] = observation.vocabulary_curator_batch_plan_path
|
|
872
|
+
return payload
|
|
873
|
+
|
|
874
|
+
|
|
875
|
+
def _wait_external_effect(workflow_event: RelatedNotesQuotaWaitEvent | LinkRuntimeObservedEvent, origin_state: LinkState) -> WorkflowEffect:
|
|
876
|
+
recovery_state = (
|
|
877
|
+
workflow_event.observation.related_notes_recovery_state
|
|
878
|
+
if isinstance(workflow_event, LinkRuntimeObservedEvent)
|
|
879
|
+
else workflow_event.related_notes_recovery_state
|
|
880
|
+
)
|
|
881
|
+
resume_action = (
|
|
882
|
+
workflow_event.observation.next_action
|
|
883
|
+
if isinstance(workflow_event, LinkRuntimeObservedEvent)
|
|
884
|
+
else workflow_event.resume_action
|
|
885
|
+
)
|
|
886
|
+
if not recovery_state.status:
|
|
887
|
+
recovery_state = RelatedNotesRecoveryStateEffectPayload.from_payload(
|
|
888
|
+
{
|
|
889
|
+
"schema": "medical-notes-workbench.related-notes-recovery-state.v1",
|
|
890
|
+
"status": "waiting_for_retry",
|
|
891
|
+
"blocked_reason": "related_notes_headless_quota_exhausted",
|
|
892
|
+
"next_action": resume_action,
|
|
893
|
+
"resume_supported": True,
|
|
894
|
+
}
|
|
895
|
+
)
|
|
896
|
+
payload = WaitExternalEffectPayload.model_validate(
|
|
897
|
+
{
|
|
898
|
+
"related_notes_recovery_state": recovery_state,
|
|
899
|
+
"next_action": resume_action,
|
|
900
|
+
}
|
|
901
|
+
).to_payload()
|
|
902
|
+
return WorkflowEffect(
|
|
903
|
+
workflow=workflow_event.workflow,
|
|
904
|
+
run_id=workflow_event.run_id,
|
|
905
|
+
effect_id="link-related-notes-quota-wait",
|
|
906
|
+
origin_state=origin_state.value,
|
|
907
|
+
kind=WorkflowEffectKind.WAIT_EXTERNAL,
|
|
908
|
+
target="related_notes.quota",
|
|
909
|
+
payload=payload,
|
|
910
|
+
requires_receipt=False,
|
|
911
|
+
no_resource_mutation=True,
|
|
912
|
+
resume_action=resume_action,
|
|
913
|
+
)
|
|
914
|
+
|
|
915
|
+
|
|
916
|
+
def _human_transition(
|
|
917
|
+
workflow_event: LinkEvent,
|
|
918
|
+
to_state: LinkState,
|
|
919
|
+
*,
|
|
920
|
+
reason_code: str,
|
|
921
|
+
) -> WorkflowTransitionResult:
|
|
922
|
+
decision = _decision(
|
|
923
|
+
kind="ask_human",
|
|
924
|
+
phase=to_state.value,
|
|
925
|
+
reason_code=reason_code,
|
|
926
|
+
next_action="link:confirm-apply",
|
|
927
|
+
)
|
|
928
|
+
packet = HumanDecisionPacket.model_validate(decision.to_human_decision_packet())
|
|
929
|
+
effect = WorkflowEffect(
|
|
930
|
+
workflow=workflow_event.workflow,
|
|
931
|
+
run_id=workflow_event.run_id,
|
|
932
|
+
effect_id="link-human-apply-confirmation",
|
|
933
|
+
origin_state=to_state.value,
|
|
934
|
+
kind=WorkflowEffectKind.ASK_HUMAN,
|
|
935
|
+
target="human.link_apply_confirmation",
|
|
936
|
+
payload={"kind": "human_decision", "reason_code": reason_code},
|
|
937
|
+
requires_receipt=False,
|
|
938
|
+
no_resource_mutation=True,
|
|
939
|
+
)
|
|
940
|
+
return _transition(
|
|
941
|
+
workflow_event,
|
|
942
|
+
to_state,
|
|
943
|
+
reason_code=reason_code,
|
|
944
|
+
effects=[effect],
|
|
945
|
+
decision=decision,
|
|
946
|
+
human_decision_packet=packet,
|
|
947
|
+
resume_action=decision.resume_action,
|
|
948
|
+
)
|
|
949
|
+
|
|
950
|
+
|
|
951
|
+
def _effect_contract_for_state(state: LinkState) -> tuple[str, LinkWorkflowRunKind]:
|
|
952
|
+
match state:
|
|
953
|
+
case LinkState.DIAGNOSING_GRAPH:
|
|
954
|
+
return LINK_WORKFLOW, "diagnose"
|
|
955
|
+
case LinkState.VOCABULARY_BOOTSTRAP_REQUIRED:
|
|
956
|
+
return LINK_WORKFLOW, "vocabulary_bootstrap"
|
|
957
|
+
case LinkState.WAITING_AGENT_DISAMBIGUATION:
|
|
958
|
+
return LINK_WORKFLOW, "agent_disambiguation"
|
|
959
|
+
case LinkState.WAITING_AGENT_VOCABULARY_CURATOR:
|
|
960
|
+
return LINK_WORKFLOW, "vocabulary_curator"
|
|
961
|
+
case LinkState.APPLYING_BODY_LINKS:
|
|
962
|
+
return LINK_WORKFLOW, "apply_body_links"
|
|
963
|
+
case LinkState.APPLYING_RELATED_NOTES:
|
|
964
|
+
return LINK_WORKFLOW, "apply_related_notes"
|
|
965
|
+
case LinkState.APPLYING_VOCABULARY_SEMANTIC_REPAIR:
|
|
966
|
+
return LINK_WORKFLOW, "apply_vocabulary_semantic_repair"
|
|
967
|
+
case _:
|
|
968
|
+
raise AssertionError(f"state does not emit link effect: {state.value}")
|
|
969
|
+
|
|
970
|
+
|
|
971
|
+
def _runtime_reason_code(workflow_event: LinkRuntimeObservedEvent, state: LinkState) -> str:
|
|
972
|
+
observation = workflow_event.observation
|
|
973
|
+
if observation.mode == LinkMode.BODY_ONLY and (
|
|
974
|
+
observation.related_notes_waiting_external
|
|
975
|
+
or observation.related_notes_blocked
|
|
976
|
+
or observation.related_notes_applied
|
|
977
|
+
):
|
|
978
|
+
return "link_body_mode_contract_violation"
|
|
979
|
+
if observation.reason_code.strip():
|
|
980
|
+
return observation.reason_code.strip()
|
|
981
|
+
if state == LinkState.STALE_DIAGNOSIS:
|
|
982
|
+
return "stale_diagnosis"
|
|
983
|
+
if state == LinkState.WAITING_EXTERNAL_RELATED_NOTES_QUOTA:
|
|
984
|
+
return "related_notes_quota_wait"
|
|
985
|
+
if state == LinkState.WAITING_AGENT_RELATED_NOTES_EXPORT_RECOVERY:
|
|
986
|
+
return observation.related_notes_export_recovery_reason or "related_notes_export_recovery_required"
|
|
987
|
+
if state == LinkState.VOCABULARY_BOOTSTRAP_REQUIRED:
|
|
988
|
+
return "vocabulary_bootstrap_required"
|
|
989
|
+
if state == LinkState.WAITING_AGENT_VOCABULARY_CURATOR:
|
|
990
|
+
return "vocabulary_semantic_ingestion_pending"
|
|
991
|
+
if state == LinkState.RELATED_NOTES_BLOCKED:
|
|
992
|
+
return "related_notes_blocked"
|
|
993
|
+
if state == LinkState.BODY_LINKS_BLOCKED:
|
|
994
|
+
return observation.body_linker_blocked_reason or "body_linker_blocked"
|
|
995
|
+
if state == LinkState.FAILED:
|
|
996
|
+
return "link_failed"
|
|
997
|
+
return state.value
|
|
998
|
+
|
|
999
|
+
|
|
1000
|
+
def _resume_action_for_link_state(state: LinkState) -> str:
|
|
1001
|
+
match state:
|
|
1002
|
+
case LinkState.STALE_DIAGNOSIS:
|
|
1003
|
+
return "link:diagnose"
|
|
1004
|
+
case LinkState.GRAPH_DIAGNOSIS_BLOCKED:
|
|
1005
|
+
return "link:diagnose"
|
|
1006
|
+
case LinkState.BODY_LINKS_BLOCKED:
|
|
1007
|
+
return "link:repair-body-links"
|
|
1008
|
+
case LinkState.RELATED_NOTES_BLOCKED:
|
|
1009
|
+
return "link:repair-related-notes"
|
|
1010
|
+
case LinkState.WAITING_AGENT_RELATED_NOTES_EXPORT_RECOVERY:
|
|
1011
|
+
return "link:recover-related-notes-export"
|
|
1012
|
+
case LinkState.VOCABULARY_SEMANTIC_REPAIR_BLOCKED:
|
|
1013
|
+
return "link:repair-vocabulary-semantics"
|
|
1014
|
+
case LinkState.VOCABULARY_BOOTSTRAP_REQUIRED:
|
|
1015
|
+
return "link:bootstrap-vocabulary"
|
|
1016
|
+
case LinkState.WAITING_AGENT_DISAMBIGUATION:
|
|
1017
|
+
return "link:run-agent-disambiguation"
|
|
1018
|
+
case LinkState.WAITING_AGENT_VOCABULARY_CURATOR:
|
|
1019
|
+
return "link:run-vocabulary-curator"
|
|
1020
|
+
case LinkState.WAITING_HUMAN_CONFIRMATION:
|
|
1021
|
+
return "link:confirm-apply"
|
|
1022
|
+
case LinkState.APPLYING_BODY_LINKS:
|
|
1023
|
+
return "link:apply-body-links"
|
|
1024
|
+
case LinkState.APPLYING_RELATED_NOTES:
|
|
1025
|
+
return "link:apply-related-notes"
|
|
1026
|
+
case LinkState.APPLYING_VOCABULARY_SEMANTIC_REPAIR:
|
|
1027
|
+
return "link:apply-vocabulary-semantic-repair"
|
|
1028
|
+
case _:
|
|
1029
|
+
return "link:diagnose"
|
|
1030
|
+
|
|
1031
|
+
|
|
1032
|
+
def _decision(
|
|
1033
|
+
*,
|
|
1034
|
+
kind: Literal["hard_block", "failed", "ask_human"],
|
|
1035
|
+
phase: str,
|
|
1036
|
+
reason_code: str,
|
|
1037
|
+
next_action: str,
|
|
1038
|
+
) -> WorkflowDecision:
|
|
1039
|
+
evidence = [
|
|
1040
|
+
DecisionEvidence(
|
|
1041
|
+
summary=f"link StateChart reached {phase}.",
|
|
1042
|
+
technical_code=reason_code,
|
|
1043
|
+
source="link_machine",
|
|
1044
|
+
)
|
|
1045
|
+
]
|
|
1046
|
+
base: JsonObject = {
|
|
1047
|
+
"kind": kind,
|
|
1048
|
+
"phase": phase,
|
|
1049
|
+
"reason_code": reason_code,
|
|
1050
|
+
"public_summary": "O workflow de links precisa parar nesta etapa.",
|
|
1051
|
+
"developer_summary": f"StateChart transition stopped at {phase}:{reason_code}.",
|
|
1052
|
+
"evidence": evidence,
|
|
1053
|
+
"next_action": next_action,
|
|
1054
|
+
"required_inputs": _required_inputs_for_reason(reason_code),
|
|
1055
|
+
"resume_action": next_action,
|
|
1056
|
+
}
|
|
1057
|
+
if kind == "ask_human":
|
|
1058
|
+
base.update(
|
|
1059
|
+
{
|
|
1060
|
+
"public_summary": "Preciso da sua confirmacao antes de aplicar mudancas de links.",
|
|
1061
|
+
"human_decision_kind": reason_code,
|
|
1062
|
+
"recommended_option_id": "apply",
|
|
1063
|
+
"options": [
|
|
1064
|
+
HumanDecisionOption(
|
|
1065
|
+
id="apply",
|
|
1066
|
+
label="Aplicar",
|
|
1067
|
+
description="Aplica o plano de links com protecao do vault.",
|
|
1068
|
+
),
|
|
1069
|
+
HumanDecisionOption(
|
|
1070
|
+
id="cancel",
|
|
1071
|
+
label="Cancelar",
|
|
1072
|
+
description="Mantem a Wiki sem alteracoes deste plano.",
|
|
1073
|
+
),
|
|
1074
|
+
],
|
|
1075
|
+
"rejected_automations": _rejected_automations(reason_code),
|
|
1076
|
+
}
|
|
1077
|
+
)
|
|
1078
|
+
return WorkflowDecision(**base)
|
|
1079
|
+
|
|
1080
|
+
|
|
1081
|
+
def _required_inputs_for_reason(reason_code: str) -> list[str]:
|
|
1082
|
+
"""Return missing operator inputs owned by LinkMachine blocker decisions."""
|
|
1083
|
+
|
|
1084
|
+
match reason_code:
|
|
1085
|
+
case "linker_mode_required":
|
|
1086
|
+
return ["diagnose_or_apply"]
|
|
1087
|
+
case "trigger_context_apply_not_allowed":
|
|
1088
|
+
return ["diagnosis"]
|
|
1089
|
+
case _:
|
|
1090
|
+
return []
|
|
1091
|
+
|
|
1092
|
+
|
|
1093
|
+
def _rejected_automations(reason_code: str) -> list[RejectedAutomation]:
|
|
1094
|
+
return [
|
|
1095
|
+
RejectedAutomation(kind="auto_fix", reason_code=reason_code, reason="Aplicar links muta a Wiki."),
|
|
1096
|
+
RejectedAutomation(
|
|
1097
|
+
kind="auto_defer",
|
|
1098
|
+
reason_code=reason_code,
|
|
1099
|
+
reason="Adiar sem decisao deixa o plano de links pendente.",
|
|
1100
|
+
),
|
|
1101
|
+
RejectedAutomation(
|
|
1102
|
+
kind="auto_plan",
|
|
1103
|
+
reason_code=reason_code,
|
|
1104
|
+
reason="Planejar novamente nao substitui a confirmacao de apply.",
|
|
1105
|
+
),
|
|
1106
|
+
]
|