mednotes-opencode 0.1.0

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Files changed (430) hide show
  1. package/.opencode/agents/med-chat-triager.md +204 -0
  2. package/.opencode/agents/med-flashcard-maker.md +63 -0
  3. package/.opencode/agents/med-knowledge-architect.md +230 -0
  4. package/.opencode/agents/med-link-graph-curator.md +177 -0
  5. package/.opencode/agents/med-publish-guard.md +62 -0
  6. package/.opencode/commands/flashcards.md +25 -0
  7. package/.opencode/commands/mednotes/create.md +25 -0
  8. package/.opencode/commands/mednotes/enrich.md +27 -0
  9. package/.opencode/commands/mednotes/fix-wiki.md +27 -0
  10. package/.opencode/commands/mednotes/history.md +22 -0
  11. package/.opencode/commands/mednotes/link-body.md +25 -0
  12. package/.opencode/commands/mednotes/link-related.md +27 -0
  13. package/.opencode/commands/mednotes/link.md +27 -0
  14. package/.opencode/commands/mednotes/pdf-library.md +27 -0
  15. package/.opencode/commands/mednotes/process-chats.md +23 -0
  16. package/.opencode/commands/mednotes/setup.md +21 -0
  17. package/.opencode/commands/mednotes/status.md +27 -0
  18. package/.opencode/commands/mednotes/telemetry.md +27 -0
  19. package/.opencode/commands/report.md +26 -0
  20. package/.opencode/mednotes/AGENTS.md +57 -0
  21. package/.opencode/mednotes/agents/med-chat-triager.md +197 -0
  22. package/.opencode/mednotes/agents/med-flashcard-maker.md +56 -0
  23. package/.opencode/mednotes/agents/med-knowledge-architect.md +224 -0
  24. package/.opencode/mednotes/agents/med-link-graph-curator.md +171 -0
  25. package/.opencode/mednotes/agents/med-publish-guard.md +55 -0
  26. package/.opencode/mednotes/contracts/.gitkeep +1 -0
  27. package/.opencode/mednotes/contracts/agents.json +116 -0
  28. package/.opencode/mednotes/contracts/opencode-plugin.json +70 -0
  29. package/.opencode/mednotes/docs/agent-prompt-hardening.md +567 -0
  30. package/.opencode/mednotes/docs/agent-role-contracts.md +94 -0
  31. package/.opencode/mednotes/docs/anki-mcp-twenty-rules.md +214 -0
  32. package/.opencode/mednotes/docs/anki-templates/README.md +39 -0
  33. package/.opencode/mednotes/docs/anki-templates/cloze.back.html +23 -0
  34. package/.opencode/mednotes/docs/anki-templates/cloze.front.html +14 -0
  35. package/.opencode/mednotes/docs/anki-templates/qa.back.html +24 -0
  36. package/.opencode/mednotes/docs/anki-templates/qa.front.html +14 -0
  37. package/.opencode/mednotes/docs/anki-templates/style.css +182 -0
  38. package/.opencode/mednotes/docs/atomicity-splitting-policy.md +113 -0
  39. package/.opencode/mednotes/docs/extension-docs.md +40 -0
  40. package/.opencode/mednotes/docs/flashcard-ingestion.md +278 -0
  41. package/.opencode/mednotes/docs/knowledge-architect.md +208 -0
  42. package/.opencode/mednotes/docs/merge-policy.md +110 -0
  43. package/.opencode/mednotes/docs/public-vocabulary.md +104 -0
  44. package/.opencode/mednotes/docs/semantic-linker.md +141 -0
  45. package/.opencode/mednotes/docs/taxonomy-policy.md +90 -0
  46. package/.opencode/mednotes/docs/triage-policy.md +187 -0
  47. package/.opencode/mednotes/docs/vault-version-control.md +758 -0
  48. package/.opencode/mednotes/docs/vocabulary-db-recovery.md +58 -0
  49. package/.opencode/mednotes/docs/workflow-output-contract.md +779 -0
  50. package/.opencode/mednotes/hooks/hooks.json +79 -0
  51. package/.opencode/mednotes/package-lock.json +6361 -0
  52. package/.opencode/mednotes/package.json +15 -0
  53. package/.opencode/mednotes/pyproject.toml +48 -0
  54. package/.opencode/mednotes/scripts/bootstrap_windows_python_uv.cmd +13 -0
  55. package/.opencode/mednotes/scripts/bootstrap_windows_python_uv.ps1 +172 -0
  56. package/.opencode/mednotes/scripts/enrich_notes.py +23 -0
  57. package/.opencode/mednotes/scripts/full_reset_windows_python_uv.cmd +13 -0
  58. package/.opencode/mednotes/scripts/hooks/antigravity_hook_status.mjs +212 -0
  59. package/.opencode/mednotes/scripts/hooks/mednotes_hook/adapters/antigravity.mjs +169 -0
  60. package/.opencode/mednotes/scripts/hooks/mednotes_hook/adapters/harness_payload.mjs +103 -0
  61. package/.opencode/mednotes/scripts/hooks/mednotes_hook/adapters/opencode_plugin.mjs +341 -0
  62. package/.opencode/mednotes/scripts/hooks/mednotes_hook/adapters/opencode_user_config_sync.mjs +177 -0
  63. package/.opencode/mednotes/scripts/hooks/mednotes_hook/anki_preflight.mjs +214 -0
  64. package/.opencode/mednotes/scripts/hooks/mednotes_hook/cli.mjs +143 -0
  65. package/.opencode/mednotes/scripts/hooks/mednotes_hook/diagnostics.mjs +11 -0
  66. package/.opencode/mednotes/scripts/hooks/mednotes_hook/domain/agent_directive_core.mjs +160 -0
  67. package/.opencode/mednotes/scripts/hooks/mednotes_hook/fsm_directive.mjs +1470 -0
  68. package/.opencode/mednotes/scripts/hooks/mednotes_hook/hook_errors.mjs +120 -0
  69. package/.opencode/mednotes/scripts/hooks/mednotes_hook/retention.mjs +114 -0
  70. package/.opencode/mednotes/scripts/hooks/mednotes_hook/runtime.mjs +174 -0
  71. package/.opencode/mednotes/scripts/hooks/mednotes_hook/telemetry_capture.mjs +511 -0
  72. package/.opencode/mednotes/scripts/hooks/mednotes_hook/vault_guard.mjs +624 -0
  73. package/.opencode/mednotes/scripts/hooks/mednotes_hook.mjs +5 -0
  74. package/.opencode/mednotes/scripts/mednotes/_runtime_paths.py +24 -0
  75. package/.opencode/mednotes/scripts/mednotes/anki_model_validator.py +18 -0
  76. package/.opencode/mednotes/scripts/mednotes/capture_extension_diff.py +1562 -0
  77. package/.opencode/mednotes/scripts/mednotes/feedback_report.py +16 -0
  78. package/.opencode/mednotes/scripts/mednotes/flashcard_index.py +18 -0
  79. package/.opencode/mednotes/scripts/mednotes/flashcard_pipeline.py +18 -0
  80. package/.opencode/mednotes/scripts/mednotes/flashcard_report.py +18 -0
  81. package/.opencode/mednotes/scripts/mednotes/flashcard_sources.py +18 -0
  82. package/.opencode/mednotes/scripts/mednotes/obsidian/README.md +6 -0
  83. package/.opencode/mednotes/scripts/mednotes/obsidian_note_utils.py +20 -0
  84. package/.opencode/mednotes/scripts/mednotes/pdf_library/cli.py +16 -0
  85. package/.opencode/mednotes/scripts/mednotes/project_fsm.py +229 -0
  86. package/.opencode/mednotes/scripts/mednotes/setup_telemetry_email.py +404 -0
  87. package/.opencode/mednotes/scripts/mednotes/sync_anki_twenty_rules.py +18 -0
  88. package/.opencode/mednotes/scripts/mednotes/sync_opencode_user_config.py +36 -0
  89. package/.opencode/mednotes/scripts/mednotes/wiki/cli.py +20 -0
  90. package/.opencode/mednotes/scripts/mednotes/wiki_graph.py +18 -0
  91. package/.opencode/mednotes/scripts/mednotes/wiki_tree.py +134 -0
  92. package/.opencode/mednotes/scripts/reset_windows_python_uv.ps1 +625 -0
  93. package/.opencode/mednotes/scripts/run_python.mjs +109 -0
  94. package/.opencode/mednotes/scripts/vault/vault_commit.ps1 +19 -0
  95. package/.opencode/mednotes/scripts/vault/vault_commit.sh +18 -0
  96. package/.opencode/mednotes/scripts/vault/vault_git.ps1 +19 -0
  97. package/.opencode/mednotes/scripts/vault/vault_git.py +3107 -0
  98. package/.opencode/mednotes/scripts/vault/vault_git.sh +18 -0
  99. package/.opencode/mednotes/scripts/vault/vault_precommit.ps1 +19 -0
  100. package/.opencode/mednotes/scripts/vault/vault_precommit.sh +18 -0
  101. package/.opencode/mednotes/skills/THIRD_PARTY_NOTICES.md +45 -0
  102. package/.opencode/mednotes/skills/create-medical-flashcards/SKILL.md +113 -0
  103. package/.opencode/mednotes/skills/create-medical-note/SKILL.md +90 -0
  104. package/.opencode/mednotes/skills/enrich-medical-note/SKILL.md +120 -0
  105. package/.opencode/mednotes/skills/fix-medical-wiki/SKILL.md +559 -0
  106. package/.opencode/mednotes/skills/link-medical-wiki/SKILL.md +224 -0
  107. package/.opencode/mednotes/skills/obsidian-cli/SKILL.md +118 -0
  108. package/.opencode/mednotes/skills/obsidian-markdown/SKILL.md +207 -0
  109. package/.opencode/mednotes/skills/obsidian-markdown/references/CALLOUTS.md +58 -0
  110. package/.opencode/mednotes/skills/obsidian-markdown/references/EMBEDS.md +63 -0
  111. package/.opencode/mednotes/skills/obsidian-markdown/references/PROPERTIES.md +61 -0
  112. package/.opencode/mednotes/skills/obsidian-ops/SKILL.md +136 -0
  113. package/.opencode/mednotes/skills/pdf-library/SKILL.md +45 -0
  114. package/.opencode/mednotes/skills/process-medical-chats/SKILL.md +246 -0
  115. package/.opencode/mednotes/skills/workflow-report/SKILL.md +100 -0
  116. package/.opencode/mednotes/src/mednotes/__init__.py +5 -0
  117. package/.opencode/mednotes/src/mednotes/domains/__init__.py +5 -0
  118. package/.opencode/mednotes/src/mednotes/domains/flashcards/README.md +26 -0
  119. package/.opencode/mednotes/src/mednotes/domains/flashcards/__init__.py +2 -0
  120. package/.opencode/mednotes/src/mednotes/domains/flashcards/build_demo_apkg.py +177 -0
  121. package/.opencode/mednotes/src/mednotes/domains/flashcards/contracts.py +385 -0
  122. package/.opencode/mednotes/src/mednotes/domains/flashcards/flashcards_machine.py +522 -0
  123. package/.opencode/mednotes/src/mednotes/domains/flashcards/fsm.py +817 -0
  124. package/.opencode/mednotes/src/mednotes/domains/flashcards/index.py +630 -0
  125. package/.opencode/mednotes/src/mednotes/domains/flashcards/install_models.py +445 -0
  126. package/.opencode/mednotes/src/mednotes/domains/flashcards/model.py +359 -0
  127. package/.opencode/mednotes/src/mednotes/domains/flashcards/obsidian_links.py +135 -0
  128. package/.opencode/mednotes/src/mednotes/domains/flashcards/obsidian_note_utils.py +546 -0
  129. package/.opencode/mednotes/src/mednotes/domains/flashcards/pipeline.py +580 -0
  130. package/.opencode/mednotes/src/mednotes/domains/flashcards/report.py +510 -0
  131. package/.opencode/mednotes/src/mednotes/domains/flashcards/sources.py +682 -0
  132. package/.opencode/mednotes/src/mednotes/domains/flashcards/sync_rules.py +184 -0
  133. package/.opencode/mednotes/src/mednotes/domains/history/__init__.py +1 -0
  134. package/.opencode/mednotes/src/mednotes/domains/history/history_fsm.py +852 -0
  135. package/.opencode/mednotes/src/mednotes/domains/history/history_machine.py +453 -0
  136. package/.opencode/mednotes/src/mednotes/domains/setup/__init__.py +7 -0
  137. package/.opencode/mednotes/src/mednotes/domains/setup/setup_fsm.py +808 -0
  138. package/.opencode/mednotes/src/mednotes/domains/setup/setup_machine.py +973 -0
  139. package/.opencode/mednotes/src/mednotes/domains/wiki/README.md +64 -0
  140. package/.opencode/mednotes/src/mednotes/domains/wiki/__init__.py +1 -0
  141. package/.opencode/mednotes/src/mednotes/domains/wiki/api.py +668 -0
  142. package/.opencode/mednotes/src/mednotes/domains/wiki/batch_state.py +102 -0
  143. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/__init__.py +1 -0
  144. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/atomicity/__init__.py +1 -0
  145. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/atomicity/atomicity.py +877 -0
  146. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/body_link/__init__.py +1 -0
  147. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/body_link/body_linker.py +1562 -0
  148. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/effects/__init__.py +1 -0
  149. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/effects/effect_adapters.py +949 -0
  150. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/effects/fix_wiki_runtime_adapters.py +433 -0
  151. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/graph/__init__.py +1 -0
  152. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/graph/coverage.py +413 -0
  153. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/graph/graph.py +396 -0
  154. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/graph/graph_fixes.py +161 -0
  155. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/hygiene/__init__.py +1 -0
  156. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/hygiene/hygiene.py +483 -0
  157. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/__init__.py +2 -0
  158. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/anchors.py +185 -0
  159. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/__init__.py +0 -0
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  161. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/config.py +131 -0
  162. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/download.py +224 -0
  163. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/frontmatter.py +59 -0
  164. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/insert.py +227 -0
  165. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/core/local_import.py +54 -0
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  167. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/sources/web_profiles.py +99 -0
  168. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/sources/web_search.py +203 -0
  169. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/illustrate/sources/wikimedia.py +102 -0
  170. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/markdown/__init__.py +1 -0
  171. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/markdown/markdown_db_adapter.mjs +434 -0
  172. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/markdown/markdown_node_runtime.py +274 -0
  173. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/markdown/markdown_query.py +227 -0
  174. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/__init__.py +1 -0
  175. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/artifacts.py +605 -0
  176. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/canonical_merge.py +277 -0
  177. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/markdown_zones.py +85 -0
  178. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/meaning_planner.py +307 -0
  179. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_iter.py +67 -0
  180. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_merge.py +278 -0
  181. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_plan.py +409 -0
  182. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_policy.py +22 -0
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  186. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/models.py +208 -0
  187. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/prompts.py +37 -0
  188. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/tables.py +236 -0
  189. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/note_style/validate.py +404 -0
  190. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/provenance.py +478 -0
  191. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/raw_chats.py +273 -0
  192. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/notes/sources_backfill.py +235 -0
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  195. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/pdf/captions.py +47 -0
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  239. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/subagents/agents.py +1767 -0
  240. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/__init__.py +1 -0
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  243. package/.opencode/mednotes/src/mednotes/domains/wiki/capabilities/vocabulary/llm_disambiguation.py +182 -0
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  430. package/package.json +45 -0
@@ -0,0 +1,275 @@
1
+ """CLI for local workflow feedback records and improvement backlog."""
2
+ from __future__ import annotations
3
+
4
+ import argparse
5
+ import json
6
+ import sys
7
+ import time
8
+ from pathlib import Path
9
+ from typing import Any
10
+
11
+ from mednotes.platform.feedback.core import (
12
+ BACKLOG_SCHEMA,
13
+ build_backlog,
14
+ feedback_root,
15
+ record_workflow_run,
16
+ )
17
+ from mednotes.platform.feedback.integrity import check_extension_integrity
18
+ from mednotes.platform.feedback.telemetry import (
19
+ DEFAULT_PAYLOAD_LEVEL,
20
+ PAYLOAD_LEVELS,
21
+ disable_telemetry,
22
+ enable_telemetry,
23
+ preview_envelope,
24
+ send_telemetry,
25
+ telemetry_status,
26
+ )
27
+
28
+
29
+ def _read_json(path: str | None) -> Any:
30
+ if not path:
31
+ return {}
32
+ if path == "-":
33
+ return json.loads(sys.stdin.read() or "{}")
34
+ return json.loads(Path(path).read_text(encoding="utf-8"))
35
+
36
+
37
+ def _json(data: Any) -> None:
38
+ print(json.dumps(data, ensure_ascii=False, indent=2, sort_keys=True))
39
+
40
+
41
+ def _cmd_record(args: argparse.Namespace) -> int:
42
+ payload = _read_json(args.payload)
43
+ if not isinstance(payload, dict):
44
+ payload = {}
45
+ if args.status:
46
+ payload["status"] = args.status
47
+ if args.phase:
48
+ payload["phase"] = args.phase
49
+ if args.blocked_reason:
50
+ payload["blocked_reason"] = args.blocked_reason
51
+ if args.next_action:
52
+ payload["next_action"] = args.next_action
53
+ if args.required_input:
54
+ payload["required_inputs"] = args.required_input
55
+ if args.human_decision_required:
56
+ payload["human_decision_required"] = True
57
+ if args.dry_run:
58
+ payload["dry_run"] = True
59
+ if args.apply:
60
+ payload["apply"] = True
61
+ record = record_workflow_run(
62
+ workflow=args.workflow,
63
+ command=args.command,
64
+ payload=payload,
65
+ exit_code=args.exit_code,
66
+ started_at=time.time(),
67
+ duration_ms=args.duration_ms,
68
+ snippets=args.snippet,
69
+ source="agent" if args.agent else "cli",
70
+ )
71
+ _json(record)
72
+ return 0
73
+
74
+
75
+ def _cmd_backlog(args: argparse.Namespace) -> int:
76
+ backlog = build_backlog(since=args.since)
77
+ if args.format == "json":
78
+ _json(backlog)
79
+ else:
80
+ print(format_backlog_markdown(backlog), end="")
81
+ return 0
82
+
83
+
84
+ def _cmd_telemetry_enable(args: argparse.Namespace) -> int:
85
+ _json(
86
+ enable_telemetry(
87
+ endpoint_url=args.endpoint,
88
+ auth_token=args.token,
89
+ payload_level=args.payload_level,
90
+ )
91
+ )
92
+ return 0
93
+
94
+
95
+ def _cmd_telemetry_disable(args: argparse.Namespace) -> int:
96
+ _json(disable_telemetry())
97
+ return 0
98
+
99
+
100
+ def _cmd_telemetry_status(args: argparse.Namespace) -> int:
101
+ _json(telemetry_status())
102
+ return 0
103
+
104
+
105
+ def _cmd_telemetry_preview(args: argparse.Namespace) -> int:
106
+ _json(preview_envelope(since=args.since, limit=args.limit))
107
+ return 0
108
+
109
+
110
+ def _cmd_telemetry_send(args: argparse.Namespace) -> int:
111
+ result = send_telemetry(since=args.since, limit=args.limit)
112
+ _json(result)
113
+ return 0 if result.get("ok") else 3
114
+
115
+
116
+ def _cmd_integrity_status(args: argparse.Namespace) -> int:
117
+ status = check_extension_integrity(
118
+ include_diff=args.include_diff,
119
+ force=args.force,
120
+ cache_dir=feedback_root() / "integrity",
121
+ )
122
+ if args.format == "json":
123
+ _json(status)
124
+ else:
125
+ print(format_integrity_markdown(status), end="")
126
+ return 0 if status.get("checked") or status.get("skipped_reason") in {"manifest_not_found"} else 4
127
+
128
+
129
+ def format_backlog_markdown(backlog: dict[str, Any]) -> str:
130
+ lines = [
131
+ "# Workflow Feedback Backlog",
132
+ "",
133
+ f"- Schema: `{BACKLOG_SCHEMA}`",
134
+ f"- Desde: `{backlog.get('since')}`",
135
+ f"- Runs analisados: {backlog.get('run_count', 0)}",
136
+ f"- Itens: {len(backlog.get('items', []))}",
137
+ "",
138
+ ]
139
+ items = backlog.get("items") if isinstance(backlog.get("items"), list) else []
140
+ if not items:
141
+ lines.append("Nenhum padrão recorrente encontrado.")
142
+ return "\n".join(lines) + "\n"
143
+ for item in items:
144
+ lines.extend(
145
+ [
146
+ f"## {item['title']}",
147
+ "",
148
+ f"- Workflow: `{item['workflow']}`",
149
+ f"- Sinal: `{item['signal']}`",
150
+ f"- Severidade: `{item['severity']}`",
151
+ f"- Ocorrências: {item['occurrence_count']}",
152
+ f"- Tipo: `{item['improvement_type']}`",
153
+ f"- Evidência: {item['evidence']}",
154
+ f"- Recomendação: {item['recommendation']}",
155
+ f"- Teste sugerido: {item['suggested_test']}",
156
+ f"- Runs exemplo: {', '.join(item['sample_run_ids'])}",
157
+ "",
158
+ ]
159
+ )
160
+ return "\n".join(lines)
161
+
162
+
163
+ def format_integrity_markdown(status: dict[str, Any]) -> str:
164
+ summary = status.get("summary") if isinstance(status.get("summary"), dict) else {}
165
+ lines = [
166
+ "# Extension Integrity",
167
+ "",
168
+ f"- Checked: `{status.get('checked')}`",
169
+ f"- Drift detected: `{status.get('drift_detected')}`",
170
+ f"- App version: `{status.get('app_version', 'unknown')}`",
171
+ f"- Manifest: `{status.get('manifest_path') or '(not found)'}`",
172
+ f"- Changed: {summary.get('changed_count', 0)}",
173
+ f"- Modified: {summary.get('modified_count', 0)}",
174
+ f"- Missing: {summary.get('missing_count', 0)}",
175
+ f"- Unexpected: {summary.get('unexpected_count', 0)}",
176
+ f"- Line-ending only: {summary.get('line_ending_only_count', 0)}",
177
+ ]
178
+ if status.get("skipped_reason"):
179
+ lines.append(f"- Skipped reason: `{status.get('skipped_reason')}`")
180
+ for label, key in (("Modified files", "modified_files"), ("Missing files", "missing_files"), ("Unexpected files", "unexpected_files")):
181
+ files = status.get(key) if isinstance(status.get(key), list) else []
182
+ if not files:
183
+ continue
184
+ lines.extend(["", f"## {label}"])
185
+ for item in files[:8]:
186
+ lines.append(f"- `{item.get('path')}` ({item.get('kind')})")
187
+ samples = status.get("diff_samples") if isinstance(status.get("diff_samples"), list) else []
188
+ if samples:
189
+ lines.extend(["", "## Diff samples"])
190
+ for sample in samples[:3]:
191
+ body = sample.get("sample") or sample.get("current_excerpt") or sample.get("diff_unavailable_reason") or ""
192
+ lines.extend([f"- `{sample.get('path')}`", "", "```", str(body), "```"])
193
+ extension_diffs = status.get("extension_diffs") if isinstance(status.get("extension_diffs"), list) else []
194
+ if extension_diffs:
195
+ lines.extend(["", "## Extension diffs"])
196
+ for diff in extension_diffs[:3]:
197
+ body = diff.get("patch") or diff.get("full_diff_unavailable_reason") or ""
198
+ lines.extend([f"- `{diff.get('path')}` ({diff.get('change')})", "", "```diff", str(body), "```"])
199
+ return "\n".join(lines) + "\n"
200
+
201
+
202
+ def build_parser() -> argparse.ArgumentParser:
203
+ parser = argparse.ArgumentParser(description=__doc__)
204
+ sub = parser.add_subparsers(dest="command", required=True)
205
+
206
+ record = sub.add_parser("record", help="record an agent-driven workflow result")
207
+ record.add_argument("--workflow", required=True)
208
+ record.add_argument("--command", default="")
209
+ record.add_argument("--payload", help="JSON file, or '-' for stdin")
210
+ record.add_argument("--status")
211
+ record.add_argument("--phase")
212
+ record.add_argument("--blocked-reason")
213
+ record.add_argument("--next-action")
214
+ record.add_argument("--required-input", action="append", default=[])
215
+ record.add_argument("--human-decision-required", action="store_true")
216
+ record.add_argument("--dry-run", action="store_true")
217
+ record.add_argument("--apply", action="store_true")
218
+ record.add_argument("--exit-code", type=int, default=0)
219
+ record.add_argument("--duration-ms", type=int, default=0)
220
+ record.add_argument("--snippet", action="append", default=[])
221
+ record.add_argument("--agent", action="store_true", help="mark source as agent-driven")
222
+ record.set_defaults(func=_cmd_record)
223
+
224
+ backlog = sub.add_parser("backlog", help="build an actionable improvement backlog")
225
+ backlog.add_argument("--since", default="30d", help="Window such as 30d, 12h or an ISO timestamp.")
226
+ backlog.add_argument("--format", choices=("markdown", "json"), default="markdown")
227
+ backlog.set_defaults(func=_cmd_backlog)
228
+
229
+ integrity = sub.add_parser("integrity", help="inspect extension prompt/script drift")
230
+ integrity_sub = integrity.add_subparsers(dest="integrity_command", required=True)
231
+ integrity_status = integrity_sub.add_parser("status", help="compare the installed extension with its manifest")
232
+ integrity_status.add_argument("--format", choices=("markdown", "json"), default="json")
233
+ integrity_status.add_argument("--include-diff", action="store_true", help="include short redacted diff samples")
234
+ integrity_status.add_argument("--force", action="store_true", help="ignore throttle/cache and scan now")
235
+ integrity_status.set_defaults(func=_cmd_integrity_status)
236
+
237
+ telemetry = sub.add_parser("telemetry", help="manage remote telemetry, status and opt-out")
238
+ telemetry_sub = telemetry.add_subparsers(dest="telemetry_command", required=True)
239
+
240
+ enable = telemetry_sub.add_parser("enable", help="manually enable or override telemetry endpoint")
241
+ enable.add_argument("--endpoint", required=True, help="HTTPS endpoint that receives telemetry envelopes")
242
+ enable.add_argument("--token", required=True, help="Bearer token expected by the telemetry endpoint")
243
+ enable.add_argument("--payload-level", choices=sorted(PAYLOAD_LEVELS), default=DEFAULT_PAYLOAD_LEVEL)
244
+ enable.set_defaults(func=_cmd_telemetry_enable)
245
+
246
+ disable = telemetry_sub.add_parser("disable", help="disable remote telemetry")
247
+ disable.set_defaults(func=_cmd_telemetry_disable)
248
+
249
+ status = telemetry_sub.add_parser("status", help="show telemetry config and outbox state")
250
+ status.set_defaults(func=_cmd_telemetry_status)
251
+
252
+ preview = telemetry_sub.add_parser("preview", help="show the next telemetry envelope without sending it")
253
+ preview.add_argument("--since", default="30d")
254
+ preview.add_argument("--limit", type=int, default=20)
255
+ preview.set_defaults(func=_cmd_telemetry_preview)
256
+
257
+ send = telemetry_sub.add_parser("send", help="send unsent telemetry records and retry outbox")
258
+ send.add_argument("--since", default="30d")
259
+ send.add_argument("--limit", type=int, default=20)
260
+ send.set_defaults(func=_cmd_telemetry_send)
261
+ return parser
262
+
263
+
264
+ def main(argv: list[str] | None = None) -> int:
265
+ parser = build_parser()
266
+ args = parser.parse_args(argv)
267
+ try:
268
+ return args.func(args)
269
+ except (OSError, json.JSONDecodeError, ValueError) as exc:
270
+ print(str(exc), file=sys.stderr)
271
+ return 5
272
+
273
+
274
+ if __name__ == "__main__":
275
+ raise SystemExit(main())
@@ -0,0 +1,83 @@
1
+ """Typed adapter contracts for local telemetry and manual reports.
2
+
3
+ These models deliberately live in the platform layer: they describe local
4
+ adapter receipts, not domain policy. They are exported so launchers and agents
5
+ can audit `/mednotes:telemetry` and `/report` without falling back to loose
6
+ status dictionaries.
7
+ """
8
+ from __future__ import annotations
9
+
10
+ from typing import Literal
11
+
12
+ from pydantic import Field, model_validator
13
+
14
+ from mednotes.kernel.base import ContractModel
15
+
16
+
17
+ class TelemetryRecentBundle(ContractModel):
18
+ run_id: str = ""
19
+ workflow: str = ""
20
+ bundle_id: str = ""
21
+
22
+
23
+ class TelemetryHookHealth(ContractModel):
24
+ recent_event_count: int = Field(ge=0)
25
+ recent_error_count: int = Field(ge=0)
26
+ latest_error_types: list[str] = Field(default_factory=list)
27
+
28
+
29
+ class TelemetryStatusSnapshot(ContractModel):
30
+ schema_: Literal["medical-notes-workbench.workflow-telemetry-status.v1"] = Field(
31
+ "medical-notes-workbench.workflow-telemetry-status.v1",
32
+ alias="schema",
33
+ )
34
+ enabled: bool
35
+ ready: bool
36
+ endpoint_url: str = ""
37
+ payload_level: str = Field(min_length=1)
38
+ consent_at: str = ""
39
+ auto_enabled_at: str = ""
40
+ opt_out_at: str = ""
41
+ source: str = Field(min_length=1)
42
+ install_id: str = ""
43
+ outbox_count: int = Field(ge=0)
44
+ sent_run_count: int = Field(ge=0)
45
+ config_path: str = Field(min_length=1)
46
+ defaults_path: str = ""
47
+ recent_bundles: list[TelemetryRecentBundle] = Field(default_factory=list)
48
+ pending_pre_update_snapshot_count: int = Field(ge=0)
49
+ hook_health: TelemetryHookHealth
50
+
51
+ @model_validator(mode="after")
52
+ def disabled_project_cannot_be_ready(self) -> TelemetryStatusSnapshot:
53
+ if self.source == "project_disabled" and (self.enabled or self.ready):
54
+ raise ValueError("project-disabled telemetry cannot be enabled or ready")
55
+ return self
56
+
57
+
58
+ class ManualReportReceipt(ContractModel):
59
+ schema_: Literal["medical-notes-workbench.manual-report-receipt.v1"] = Field(
60
+ "medical-notes-workbench.manual-report-receipt.v1",
61
+ alias="schema",
62
+ )
63
+ status: Literal["sent", "not_sent", "blocked"]
64
+ requested_by_user: bool = True
65
+ capture_schema: str = Field(min_length=1)
66
+ envelope_schema: str = Field(min_length=1)
67
+ snapshot_path: str = ""
68
+ envelope_path: str = ""
69
+ send_result_path: str = ""
70
+ sent: bool = False
71
+ reason: str = ""
72
+ next_action: str = ""
73
+ redaction_status: Literal["redacted"] = "redacted"
74
+
75
+ @model_validator(mode="after")
76
+ def status_matches_send_result(self) -> ManualReportReceipt:
77
+ if self.status == "sent" and not self.sent:
78
+ raise ValueError("sent manual report receipt requires sent=true")
79
+ if self.status != "sent" and self.sent:
80
+ raise ValueError("sent=true requires status=sent")
81
+ if self.status in {"not_sent", "blocked"} and not self.reason.strip():
82
+ raise ValueError("unsent manual report receipt requires reason")
83
+ return self