snappy 3.0.3__cp38-cp38-macosx_11_0_arm64.whl → 3.2__cp38-cp38-macosx_11_0_arm64.whl

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  1. snappy/CyOpenGL.cpython-38-darwin.so +0 -0
  2. snappy/SnapPy.cpython-38-darwin.so +0 -0
  3. snappy/SnapPyHP.cpython-38-darwin.so +0 -0
  4. snappy/__init__.py +373 -426
  5. snappy/app.py +240 -75
  6. snappy/app_menus.py +93 -78
  7. snappy/browser.py +87 -63
  8. snappy/cache.py +5 -8
  9. snappy/canonical.py +249 -0
  10. snappy/{verify/cusp_shapes.py → cusps/__init__.py} +11 -19
  11. snappy/cusps/cusp_area_matrix.py +101 -0
  12. snappy/{verify/cusp_areas.py → cusps/cusp_areas_from_matrix.py} +39 -54
  13. snappy/cusps/maximal_cusp_area_matrix.py +136 -0
  14. snappy/cusps/test.py +21 -0
  15. snappy/cusps/trig_cusp_area_matrix.py +63 -0
  16. snappy/database.py +40 -31
  17. snappy/db_utilities.py +13 -14
  18. snappy/decorated_isosig.py +377 -133
  19. snappy/dev/extended_ptolemy/complexVolumesClosed.py +42 -9
  20. snappy/dev/extended_ptolemy/extended.py +32 -25
  21. snappy/dev/extended_ptolemy/giac_rur.py +23 -8
  22. snappy/dev/extended_ptolemy/phc_wrapper.py +10 -10
  23. snappy/dev/vericlosed/computeApproxHyperbolicStructureOrb.py +2 -1
  24. snappy/dev/vericlosed/gimbalLoopFinder.py +5 -5
  25. snappy/dev/vericlosed/hyperbolicStructure.py +3 -3
  26. snappy/dev/vericlosed/oneVertexTruncatedComplex.py +2 -2
  27. snappy/dev/vericlosed/truncatedComplex.py +3 -2
  28. snappy/dev/vericlosed/verifyHyperbolicStructureEngine.py +4 -3
  29. snappy/doc/_images/geodesics.jpg +0 -0
  30. snappy/doc/_images/m004_paper_plane_on_systole.jpg +0 -0
  31. snappy/doc/_images/m125_paper_plane.jpg +0 -0
  32. snappy/doc/_images/o9_00000_systole_paper_plane.jpg +0 -0
  33. snappy/doc/_images/o9_00000_systole_paper_plane_closer.jpg +0 -0
  34. snappy/doc/_sources/additional_classes.rst.txt +1 -0
  35. snappy/doc/_sources/credits.rst.txt +6 -1
  36. snappy/doc/_sources/development.rst.txt +69 -50
  37. snappy/doc/_sources/index.rst.txt +101 -66
  38. snappy/doc/_sources/installing.rst.txt +148 -165
  39. snappy/doc/_sources/news.rst.txt +136 -32
  40. snappy/doc/_sources/ptolemy.rst.txt +1 -1
  41. snappy/doc/_sources/ptolemy_examples1.rst.txt +9 -8
  42. snappy/doc/_sources/ptolemy_examples2.rst.txt +3 -3
  43. snappy/doc/_sources/ptolemy_examples3.rst.txt +14 -14
  44. snappy/doc/_sources/ptolemy_prelim.rst.txt +1 -1
  45. snappy/doc/_sources/snap.rst.txt +2 -2
  46. snappy/doc/_sources/snappy.rst.txt +1 -1
  47. snappy/doc/_sources/triangulation.rst.txt +3 -2
  48. snappy/doc/_sources/verify.rst.txt +89 -29
  49. snappy/doc/_sources/verify_internals.rst.txt +5 -16
  50. snappy/doc/_static/SnapPy-horizontal-128.png +0 -0
  51. snappy/doc/_static/SnapPy.ico +0 -0
  52. snappy/doc/_static/_sphinx_javascript_frameworks_compat.js +123 -0
  53. snappy/doc/_static/basic.css +47 -27
  54. snappy/doc/_static/css/badge_only.css +1 -0
  55. snappy/doc/_static/css/fonts/Roboto-Slab-Bold.woff +0 -0
  56. snappy/doc/_static/css/fonts/Roboto-Slab-Bold.woff2 +0 -0
  57. snappy/doc/_static/css/fonts/Roboto-Slab-Regular.woff +0 -0
  58. snappy/doc/_static/css/fonts/Roboto-Slab-Regular.woff2 +0 -0
  59. snappy/doc/_static/css/fonts/fontawesome-webfont.eot +0 -0
  60. snappy/doc/_static/css/fonts/fontawesome-webfont.svg +2671 -0
  61. snappy/doc/_static/css/fonts/fontawesome-webfont.ttf +0 -0
  62. snappy/doc/_static/css/fonts/fontawesome-webfont.woff +0 -0
  63. snappy/doc/_static/css/fonts/fontawesome-webfont.woff2 +0 -0
  64. snappy/doc/_static/css/fonts/lato-bold-italic.woff +0 -0
  65. snappy/doc/_static/css/fonts/lato-bold-italic.woff2 +0 -0
  66. snappy/doc/_static/css/fonts/lato-bold.woff +0 -0
  67. snappy/doc/_static/css/fonts/lato-bold.woff2 +0 -0
  68. snappy/doc/_static/css/fonts/lato-normal-italic.woff +0 -0
  69. snappy/doc/_static/css/fonts/lato-normal-italic.woff2 +0 -0
  70. snappy/doc/_static/css/fonts/lato-normal.woff +0 -0
  71. snappy/doc/_static/css/fonts/lato-normal.woff2 +0 -0
  72. snappy/doc/_static/css/theme.css +4 -0
  73. snappy/doc/_static/doctools.js +107 -274
  74. snappy/doc/_static/documentation_options.js +6 -5
  75. snappy/doc/_static/fonts/Lato/lato-bold.eot +0 -0
  76. snappy/doc/_static/fonts/Lato/lato-bold.ttf +0 -0
  77. snappy/doc/_static/fonts/Lato/lato-bold.woff +0 -0
  78. snappy/doc/_static/fonts/Lato/lato-bold.woff2 +0 -0
  79. snappy/doc/_static/fonts/Lato/lato-bolditalic.eot +0 -0
  80. snappy/doc/_static/fonts/Lato/lato-bolditalic.ttf +0 -0
  81. snappy/doc/_static/fonts/Lato/lato-bolditalic.woff +0 -0
  82. snappy/doc/_static/fonts/Lato/lato-bolditalic.woff2 +0 -0
  83. snappy/doc/_static/fonts/Lato/lato-italic.eot +0 -0
  84. snappy/doc/_static/fonts/Lato/lato-italic.ttf +0 -0
  85. snappy/doc/_static/fonts/Lato/lato-italic.woff +0 -0
  86. snappy/doc/_static/fonts/Lato/lato-italic.woff2 +0 -0
  87. snappy/doc/_static/fonts/Lato/lato-regular.eot +0 -0
  88. snappy/doc/_static/fonts/Lato/lato-regular.ttf +0 -0
  89. snappy/doc/_static/fonts/Lato/lato-regular.woff +0 -0
  90. snappy/doc/_static/fonts/Lato/lato-regular.woff2 +0 -0
  91. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.eot +0 -0
  92. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.ttf +0 -0
  93. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.woff +0 -0
  94. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.woff2 +0 -0
  95. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.eot +0 -0
  96. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.ttf +0 -0
  97. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.woff +0 -0
  98. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.woff2 +0 -0
  99. snappy/doc/_static/jquery.js +2 -2
  100. snappy/doc/_static/js/badge_only.js +1 -0
  101. snappy/doc/_static/js/theme.js +1 -0
  102. snappy/doc/_static/js/versions.js +228 -0
  103. snappy/doc/_static/language_data.js +3 -101
  104. snappy/doc/_static/pygments.css +1 -0
  105. snappy/doc/_static/searchtools.js +489 -398
  106. snappy/doc/_static/snappy_furo.css +33 -0
  107. snappy/doc/_static/snappy_sphinx_rtd_theme.css +42 -0
  108. snappy/doc/_static/sphinx_highlight.js +154 -0
  109. snappy/doc/additional_classes.html +688 -263
  110. snappy/doc/bugs.html +107 -94
  111. snappy/doc/censuses.html +155 -127
  112. snappy/doc/credits.html +115 -104
  113. snappy/doc/development.html +184 -146
  114. snappy/doc/genindex.html +287 -204
  115. snappy/doc/index.html +189 -150
  116. snappy/doc/installing.html +259 -266
  117. snappy/doc/manifold.html +1626 -592
  118. snappy/doc/manifoldhp.html +119 -105
  119. snappy/doc/news.html +198 -104
  120. snappy/doc/objects.inv +0 -0
  121. snappy/doc/other.html +117 -105
  122. snappy/doc/platonic_census.html +161 -114
  123. snappy/doc/plink.html +113 -105
  124. snappy/doc/ptolemy.html +131 -108
  125. snappy/doc/ptolemy_classes.html +242 -223
  126. snappy/doc/ptolemy_examples1.html +144 -130
  127. snappy/doc/ptolemy_examples2.html +141 -129
  128. snappy/doc/ptolemy_examples3.html +148 -132
  129. snappy/doc/ptolemy_examples4.html +131 -111
  130. snappy/doc/ptolemy_prelim.html +162 -138
  131. snappy/doc/py-modindex.html +104 -69
  132. snappy/doc/screenshots.html +117 -108
  133. snappy/doc/search.html +115 -84
  134. snappy/doc/searchindex.js +1 -1
  135. snappy/doc/snap.html +109 -96
  136. snappy/doc/snappy.html +134 -97
  137. snappy/doc/spherogram.html +259 -187
  138. snappy/doc/todo.html +107 -94
  139. snappy/doc/triangulation.html +1380 -111
  140. snappy/doc/tutorial.html +107 -94
  141. snappy/doc/verify.html +194 -125
  142. snappy/doc/verify_internals.html +248 -686
  143. snappy/drilling/__init__.py +456 -0
  144. snappy/drilling/barycentric.py +103 -0
  145. snappy/drilling/constants.py +5 -0
  146. snappy/drilling/crush.py +270 -0
  147. snappy/drilling/cusps.py +125 -0
  148. snappy/drilling/debug.py +242 -0
  149. snappy/drilling/epsilons.py +6 -0
  150. snappy/drilling/exceptions.py +55 -0
  151. snappy/drilling/moves.py +620 -0
  152. snappy/drilling/peripheral_curves.py +210 -0
  153. snappy/drilling/perturb.py +188 -0
  154. snappy/drilling/shorten.py +36 -0
  155. snappy/drilling/subdivide.py +274 -0
  156. snappy/drilling/test.py +23 -0
  157. snappy/drilling/test_cases.py +126 -0
  158. snappy/drilling/tracing.py +351 -0
  159. snappy/exceptions.py +23 -3
  160. snappy/export_stl.py +20 -14
  161. snappy/exterior_to_link/__init__.py +2 -0
  162. snappy/exterior_to_link/barycentric_geometry.py +463 -0
  163. snappy/exterior_to_link/exceptions.py +6 -0
  164. snappy/exterior_to_link/geodesic_map.json +14408 -0
  165. snappy/exterior_to_link/hyp_utils.py +112 -0
  166. snappy/exterior_to_link/link_projection.py +323 -0
  167. snappy/exterior_to_link/main.py +197 -0
  168. snappy/exterior_to_link/mcomplex_with_expansion.py +261 -0
  169. snappy/exterior_to_link/mcomplex_with_link.py +687 -0
  170. snappy/exterior_to_link/mcomplex_with_memory.py +162 -0
  171. snappy/exterior_to_link/pl_utils.py +491 -0
  172. snappy/exterior_to_link/put_in_S3.py +156 -0
  173. snappy/exterior_to_link/rational_linear_algebra.py +123 -0
  174. snappy/exterior_to_link/rational_linear_algebra_wrapped.py +135 -0
  175. snappy/exterior_to_link/simplify_to_base_tri.py +114 -0
  176. snappy/exterior_to_link/stored_moves.py +475 -0
  177. snappy/exterior_to_link/test.py +31 -0
  178. snappy/geometric_structure/__init__.py +212 -0
  179. snappy/geometric_structure/cusp_neighborhood/__init__.py +3 -0
  180. snappy/geometric_structure/cusp_neighborhood/complex_cusp_cross_section.py +697 -0
  181. snappy/geometric_structure/cusp_neighborhood/cusp_cross_section_base.py +484 -0
  182. snappy/geometric_structure/cusp_neighborhood/exceptions.py +42 -0
  183. snappy/geometric_structure/cusp_neighborhood/real_cusp_cross_section.py +298 -0
  184. snappy/geometric_structure/cusp_neighborhood/tiles_for_cusp_neighborhood.py +159 -0
  185. snappy/geometric_structure/cusp_neighborhood/vertices.py +32 -0
  186. snappy/geometric_structure/geodesic/__init__.py +0 -0
  187. snappy/geometric_structure/geodesic/add_core_curves.py +152 -0
  188. snappy/geometric_structure/geodesic/avoid_core_curves.py +369 -0
  189. snappy/geometric_structure/geodesic/canonical_keys.py +52 -0
  190. snappy/geometric_structure/geodesic/check_away_from_core_curve.py +60 -0
  191. snappy/geometric_structure/geodesic/constants.py +6 -0
  192. snappy/geometric_structure/geodesic/exceptions.py +22 -0
  193. snappy/geometric_structure/geodesic/fixed_points.py +93 -0
  194. snappy/geometric_structure/geodesic/geodesic_start_point_info.py +435 -0
  195. snappy/geometric_structure/geodesic/graph_trace_helper.py +67 -0
  196. snappy/geometric_structure/geodesic/line.py +30 -0
  197. snappy/geometric_structure/geodesic/multiplicity.py +127 -0
  198. snappy/geometric_structure/geodesic/tiles_for_geodesic.py +101 -0
  199. snappy/geometric_structure/test.py +22 -0
  200. snappy/gui.py +36 -36
  201. snappy/horoviewer.py +50 -48
  202. snappy/hyperboloid/__init__.py +212 -0
  203. snappy/hyperboloid/distances.py +245 -0
  204. snappy/hyperboloid/horoball.py +19 -0
  205. snappy/hyperboloid/line.py +35 -0
  206. snappy/hyperboloid/point.py +9 -0
  207. snappy/hyperboloid/triangle.py +29 -0
  208. snappy/{infodialog.py → infowindow.py} +32 -33
  209. snappy/isometry_signature.py +382 -0
  210. snappy/len_spec/__init__.py +596 -0
  211. snappy/len_spec/geodesic_info.py +110 -0
  212. snappy/len_spec/geodesic_key_info_dict.py +117 -0
  213. snappy/len_spec/geodesic_piece.py +143 -0
  214. snappy/len_spec/geometric_structure.py +182 -0
  215. snappy/len_spec/geometry.py +80 -0
  216. snappy/len_spec/length_spectrum_geodesic_info.py +170 -0
  217. snappy/len_spec/spine.py +206 -0
  218. snappy/len_spec/test.py +24 -0
  219. snappy/len_spec/test_cases.py +69 -0
  220. snappy/len_spec/tile.py +275 -0
  221. snappy/len_spec/word.py +86 -0
  222. snappy/manifolds/__init__.py +1 -1
  223. snappy/math_basics.py +176 -0
  224. snappy/matrix.py +525 -0
  225. snappy/number.py +97 -21
  226. snappy/numeric_output_checker.py +37 -27
  227. snappy/pari.py +30 -69
  228. snappy/phone_home.py +25 -20
  229. snappy/polyviewer.py +39 -37
  230. snappy/ptolemy/__init__.py +4 -6
  231. snappy/ptolemy/component.py +14 -12
  232. snappy/ptolemy/coordinates.py +312 -295
  233. snappy/ptolemy/fieldExtensions.py +14 -12
  234. snappy/ptolemy/findLoops.py +43 -31
  235. snappy/ptolemy/geometricRep.py +24 -26
  236. snappy/ptolemy/homology.py +12 -7
  237. snappy/ptolemy/manifoldMethods.py +69 -70
  238. snappy/ptolemy/matrix.py +65 -26
  239. snappy/ptolemy/numericalSolutionsToGroebnerBasis.py +18 -14
  240. snappy/ptolemy/polynomial.py +125 -119
  241. snappy/ptolemy/processComponents.py +36 -30
  242. snappy/ptolemy/processFileBase.py +79 -18
  243. snappy/ptolemy/processFileDispatch.py +13 -14
  244. snappy/ptolemy/processMagmaFile.py +44 -39
  245. snappy/ptolemy/processRurFile.py +18 -11
  246. snappy/ptolemy/ptolemyGeneralizedObstructionClass.py +20 -17
  247. snappy/ptolemy/ptolemyObstructionClass.py +13 -17
  248. snappy/ptolemy/ptolemyVariety.py +190 -121
  249. snappy/ptolemy/ptolemyVarietyPrimeIdealGroebnerBasis.py +20 -19
  250. snappy/ptolemy/reginaWrapper.py +25 -29
  251. snappy/ptolemy/rur.py +6 -14
  252. snappy/ptolemy/solutionsToPrimeIdealGroebnerBasis.py +27 -22
  253. snappy/ptolemy/test.py +247 -188
  254. snappy/ptolemy/utilities.py +41 -43
  255. snappy/raytracing/__init__.py +64 -0
  256. snappy/raytracing/additional_horospheres.py +64 -0
  257. snappy/raytracing/additional_len_spec_choices.py +63 -0
  258. snappy/raytracing/cohomology_fractal.py +10 -6
  259. snappy/raytracing/eyeball.py +123 -0
  260. snappy/raytracing/finite_raytracing_data.py +48 -38
  261. snappy/raytracing/finite_viewer.py +218 -210
  262. snappy/raytracing/geodesic_tube_info.py +174 -0
  263. snappy/raytracing/geodesics.py +246 -0
  264. snappy/raytracing/geodesics_window.py +258 -0
  265. snappy/raytracing/gui_utilities.py +152 -40
  266. snappy/raytracing/hyperboloid_navigation.py +102 -52
  267. snappy/raytracing/hyperboloid_utilities.py +114 -261
  268. snappy/raytracing/ideal_raytracing_data.py +256 -179
  269. snappy/raytracing/inside_viewer.py +522 -253
  270. snappy/raytracing/pack.py +22 -0
  271. snappy/raytracing/raytracing_data.py +46 -34
  272. snappy/raytracing/raytracing_view.py +190 -109
  273. snappy/raytracing/shaders/Eye.png +0 -0
  274. snappy/raytracing/shaders/NonGeometric.png +0 -0
  275. snappy/raytracing/shaders/__init__.py +60 -4
  276. snappy/raytracing/shaders/fragment.glsl +575 -148
  277. snappy/raytracing/test.py +29 -0
  278. snappy/raytracing/tooltip.py +146 -0
  279. snappy/raytracing/upper_halfspace_utilities.py +98 -0
  280. snappy/raytracing/view_scale_controller.py +98 -0
  281. snappy/raytracing/zoom_slider/__init__.py +32 -29
  282. snappy/raytracing/zoom_slider/test.py +2 -0
  283. snappy/sage_helper.py +69 -123
  284. snappy/{preferences.py → settings.py} +167 -145
  285. snappy/shell.py +4 -0
  286. snappy/snap/__init__.py +12 -8
  287. snappy/snap/character_varieties.py +24 -18
  288. snappy/snap/find_field.py +35 -34
  289. snappy/snap/fundamental_polyhedron.py +99 -85
  290. snappy/snap/generators.py +6 -8
  291. snappy/snap/interval_reps.py +18 -6
  292. snappy/snap/kernel_structures.py +8 -3
  293. snappy/snap/mcomplex_base.py +1 -2
  294. snappy/snap/nsagetools.py +107 -53
  295. snappy/snap/peripheral/__init__.py +1 -1
  296. snappy/snap/peripheral/dual_cellulation.py +15 -7
  297. snappy/snap/peripheral/link.py +20 -16
  298. snappy/snap/peripheral/peripheral.py +22 -14
  299. snappy/snap/peripheral/surface.py +47 -50
  300. snappy/snap/peripheral/test.py +8 -8
  301. snappy/snap/polished_reps.py +65 -40
  302. snappy/snap/shapes.py +41 -22
  303. snappy/snap/slice_obs_HKL.py +64 -25
  304. snappy/snap/t3mlite/arrow.py +88 -51
  305. snappy/snap/t3mlite/corner.py +5 -6
  306. snappy/snap/t3mlite/edge.py +32 -21
  307. snappy/snap/t3mlite/face.py +7 -9
  308. snappy/snap/t3mlite/files.py +31 -23
  309. snappy/snap/t3mlite/homology.py +14 -10
  310. snappy/snap/t3mlite/linalg.py +158 -56
  311. snappy/snap/t3mlite/mcomplex.py +739 -291
  312. snappy/snap/t3mlite/perm4.py +236 -84
  313. snappy/snap/t3mlite/setup.py +9 -10
  314. snappy/snap/t3mlite/simplex.py +65 -48
  315. snappy/snap/t3mlite/spun.py +42 -30
  316. snappy/snap/t3mlite/surface.py +45 -45
  317. snappy/snap/t3mlite/test.py +3 -0
  318. snappy/snap/t3mlite/test_vs_regina.py +17 -13
  319. snappy/snap/t3mlite/tetrahedron.py +25 -24
  320. snappy/snap/t3mlite/vertex.py +8 -13
  321. snappy/snap/test.py +45 -52
  322. snappy/snap/utilities.py +66 -65
  323. snappy/test.py +155 -158
  324. snappy/test_cases.py +263 -0
  325. snappy/testing.py +131 -0
  326. snappy/tiling/__init__.py +2 -0
  327. snappy/tiling/canonical_key_dict.py +59 -0
  328. snappy/tiling/dict_based_set.py +79 -0
  329. snappy/tiling/floor.py +49 -0
  330. snappy/tiling/hyperboloid_dict.py +54 -0
  331. snappy/tiling/iter_utils.py +78 -0
  332. snappy/tiling/lifted_tetrahedron.py +22 -0
  333. snappy/tiling/lifted_tetrahedron_set.py +54 -0
  334. snappy/tiling/real_hash_dict.py +164 -0
  335. snappy/tiling/test.py +23 -0
  336. snappy/tiling/tile.py +215 -0
  337. snappy/tiling/triangle.py +33 -0
  338. snappy/tkterminal.py +313 -203
  339. snappy/twister/main.py +1 -8
  340. snappy/twister/twister_core.cpython-38-darwin.so +0 -0
  341. snappy/upper_halfspace/__init__.py +146 -0
  342. snappy/upper_halfspace/ideal_point.py +26 -0
  343. snappy/verify/__init__.py +4 -8
  344. snappy/verify/{verifyCanonical.py → canonical.py} +114 -97
  345. snappy/verify/complex_volume/__init__.py +3 -2
  346. snappy/verify/complex_volume/adjust_torsion.py +13 -11
  347. snappy/verify/complex_volume/closed.py +29 -24
  348. snappy/verify/complex_volume/compute_ptolemys.py +8 -6
  349. snappy/verify/complex_volume/cusped.py +10 -9
  350. snappy/verify/complex_volume/extended_bloch.py +14 -12
  351. snappy/verify/{cuspTranslations.py → cusp_translations.py} +15 -14
  352. snappy/verify/edge_equations.py +80 -0
  353. snappy/verify/exceptions.py +23 -56
  354. snappy/verify/{verifyHyperbolicity.py → hyperbolicity.py} +19 -15
  355. snappy/verify/interval_newton_shapes_engine.py +51 -211
  356. snappy/verify/interval_tree.py +27 -25
  357. snappy/verify/krawczyk_shapes_engine.py +47 -50
  358. snappy/verify/maximal_cusp_area_matrix/__init__.py +17 -86
  359. snappy/verify/maximal_cusp_area_matrix/cusp_tiling_engine.py +58 -48
  360. snappy/verify/maximal_cusp_area_matrix/cusp_translate_engine.py +53 -57
  361. snappy/verify/{realAlgebra.py → real_algebra.py} +26 -20
  362. snappy/verify/shapes.py +10 -7
  363. snappy/verify/short_slopes.py +41 -42
  364. snappy/verify/{squareExtensions.py → square_extensions.py} +96 -92
  365. snappy/verify/test.py +59 -57
  366. snappy/verify/upper_halfspace/extended_matrix.py +5 -5
  367. snappy/verify/upper_halfspace/finite_point.py +44 -31
  368. snappy/verify/upper_halfspace/ideal_point.py +69 -57
  369. snappy/verify/volume.py +15 -12
  370. snappy/version.py +2 -3
  371. {snappy-3.0.3.dist-info → snappy-3.2.dist-info}/METADATA +14 -12
  372. snappy-3.2.dist-info/RECORD +503 -0
  373. {snappy-3.0.3.dist-info → snappy-3.2.dist-info}/WHEEL +1 -1
  374. {snappy-3.0.3.dist-info → snappy-3.2.dist-info}/entry_points.txt +0 -1
  375. {snappy-3.0.3.dist-info → snappy-3.2.dist-info}/top_level.txt +10 -1
  376. snappy/doc/_sources/verify_canon.rst.txt +0 -90
  377. snappy/doc/_static/classic.css +0 -266
  378. snappy/doc/_static/jquery-3.5.1.js +0 -10872
  379. snappy/doc/_static/sidebar.js +0 -159
  380. snappy/doc/_static/underscore-1.13.1.js +0 -2042
  381. snappy/doc/_static/underscore.js +0 -6
  382. snappy/doc/verify_canon.html +0 -283
  383. snappy/ppm_to_png.py +0 -243
  384. snappy/togl/__init__.py +0 -3
  385. snappy/togl/darwin-tk8.6/Togl2.1/LICENSE +0 -28
  386. snappy/togl/darwin-tk8.6/Togl2.1/libTogl2.1.dylib +0 -0
  387. snappy/togl/darwin-tk8.6/Togl2.1/pkgIndex.tcl +0 -5
  388. snappy/togl/linux2-x86_64-tk8.6/Togl2.1/LICENSE +0 -28
  389. snappy/togl/linux2-x86_64-tk8.6/Togl2.1/libTogl2.1.so +0 -0
  390. snappy/togl/linux2-x86_64-tk8.6/Togl2.1/pkgIndex.tcl +0 -5
  391. snappy/togl/win32VC-tk8.6/Togl2.1/LICENSE +0 -28
  392. snappy/togl/win32VC-tk8.6/Togl2.1/Togl21.dll +0 -0
  393. snappy/togl/win32VC-tk8.6/Togl2.1/Togl21.lib +0 -0
  394. snappy/togl/win32VC-tk8.6/Togl2.1/pkgIndex.tcl +0 -6
  395. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/LICENSE +0 -28
  396. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/Togl21.dll +0 -0
  397. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/Togl21.lib +0 -0
  398. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/pkgIndex.tcl +0 -6
  399. snappy/verify/cuspCrossSection.py +0 -1413
  400. snappy/verify/mathHelpers.py +0 -64
  401. snappy-3.0.3.dist-info/RECORD +0 -360
@@ -7,9 +7,11 @@ from .rur import RUR
7
7
  from . import processFileBase
8
8
  from ..pari import pari
9
9
 
10
+
10
11
  def contains_rur(text):
11
12
  return 'RUR=DECOMPOSITION=BEGINS' in text
12
13
 
14
+
13
15
  def decomposition_from_rur(text):
14
16
 
15
17
  py_eval = processFileBase.get_py_eval(text)
@@ -26,6 +28,7 @@ def decomposition_from_rur(text):
26
28
 
27
29
  return result
28
30
 
31
+
29
32
  def _process_rur_component(text, py_eval, manifold_thunk):
30
33
  lines = text.split('\n')
31
34
 
@@ -52,20 +55,20 @@ def _process_rur_component(text, py_eval, manifold_thunk):
52
55
  raise Exception("Unrecognized key %s" % key)
53
56
  else:
54
57
  body += line + "\n"
55
-
58
+
56
59
  if dimension is None:
57
60
  return NonZeroDimensionalComponent()
58
61
  if dimension > 0:
59
- return NonZeroDimensionalComponent(dimension = dimension)
62
+ return NonZeroDimensionalComponent(dimension=dimension)
60
63
 
61
64
  if format is None:
62
65
  raise Exception("No format specified")
63
66
 
64
67
  if format == "MAPLE-LIKE":
65
68
  d = parse_maple_like_rur(body.strip())
66
- return PtolemyCoordinates(d, is_numerical = False,
67
- py_eval_section = py_eval,
68
- manifold_thunk = manifold_thunk)
69
+ return PtolemyCoordinates(d, is_numerical=False,
70
+ py_eval_section=py_eval,
71
+ manifold_thunk=manifold_thunk)
69
72
  else:
70
73
  raise Exception("Unknown format %s" % format)
71
74
 
@@ -86,8 +89,9 @@ def parse_maple_like_rur(text):
86
89
  return dict([_parse_assignment(assignment, poly)
87
90
  for assignment in assignments_text.split(',')])
88
91
 
92
+
89
93
  def parse_rs_rur(text, variables):
90
-
94
+
91
95
  m = re.match(r'\[([^,\]]+),\s*([^,\]]+),\s*\[([^\]]+)\]\s*,\s*\[\s*\]\s*\]',
92
96
  text, re.DOTALL)
93
97
 
@@ -102,25 +106,28 @@ def parse_rs_rur(text, variables):
102
106
  denominator = pari(denominator_str.replace(var, 'x'))
103
107
  numerators = [ pari(numerator_str.replace(var, 'x'))
104
108
  for numerator_str in numerators_str.split(',') ]
105
-
109
+
106
110
  fracs = [
107
- RUR( [ ( numerator.Mod(extension), 1),
111
+ RUR( [ ( numerator.Mod(extension), 1),
108
112
  (denominator.Mod(extension), -1) ] )
109
113
  for numerator in numerators ]
110
114
 
111
115
  return dict(list(zip(variables, fracs)) + [('1', RUR.from_int(1))])
112
-
116
+
117
+
113
118
  def _find_var_of_poly(text):
114
119
  return re.search(r'[_A-Za-z][_A-Za-z0-9]*',text).group(0)
115
120
 
121
+
116
122
  def _parse_assignment(text, poly):
117
123
  var, expression = re.match(r'\s*([_A-Za-z][_A-Za-z0-9]*)\s*=\s*(.*)$',
118
124
  text).groups()
119
-
125
+
120
126
  return (
121
127
  var,
122
128
  RUR.from_pari_fraction_and_number_field(pari(expression), poly))
123
129
 
130
+
124
131
  _test_case = """
125
132
  _Z^6-3*_Z^5+3*_Z^4-2*_Z^3+_Z-1 = 0,
126
133
  {c_0012_0 = 1, c_0012_2 = _Z^5-3*_Z^4+3*_Z^3-_Z^2-2*_Z+1, c_0111_2 = -_Z*(_Z^4-2*_Z^3+_Z-1), c_1011_0 = -_Z^2*(-1+_Z), c_1101_0 = -_Z*(-1+_Z), c_1101_1 = _Z*(-1+_Z), c_1110_0 = _Z, a = (_Z^3+_Z^2)/(_Z^3+34*_Z^2+3)}
@@ -131,7 +138,7 @@ class SolutionContainer():
131
138
  def __init__(self, solutions):
132
139
  self._solutions = solutions
133
140
 
134
- def solutions(self, numerical = False):
141
+ def solutions(self, numerical=False):
135
142
  if numerical:
136
143
  return self._solutions.numerical()
137
144
  else:
@@ -1,11 +1,9 @@
1
- from __future__ import print_function
2
-
3
1
  from . import matrix
4
2
  from .polynomial import Polynomial
5
3
  from ..pari import pari
6
4
 
7
- class PtolemyGeneralizedObstructionClass(object):
8
5
 
6
+ class PtolemyGeneralizedObstructionClass():
9
7
  """
10
8
  Represents an obstruction cocycle of a PSL(n,C) representation in
11
9
  H^2(M,partial M;Z/n).
@@ -13,28 +11,34 @@ class PtolemyGeneralizedObstructionClass(object):
13
11
  >>> from snappy import Manifold
14
12
  >>> M = Manifold("m004")
15
13
 
16
- Create an obstruction class, this has to be in the kernel of d^2
14
+ Create an obstruction class, this has to be in the kernel of d^2:
15
+
17
16
  >>> c = PtolemyGeneralizedObstructionClass([2,0,0,1])
18
17
 
19
- For better accounting, give it an index
18
+ For better accounting, give it an index:
19
+
20
20
  >>> c = PtolemyGeneralizedObstructionClass([2,0,0,1], index = 1)
21
21
 
22
- Get corresponding ptolemy variety
23
- >>> p=M.ptolemy_variety(N = 3, obstruction_class = c)
22
+ Get corresponding ptolemy variety:
23
+
24
+ >>> p = M.ptolemy_variety(N=3, obstruction_class=c)
25
+
26
+ Canonical filename base:
24
27
 
25
- Canonical filename base
26
28
  >>> p.filename_base()
27
29
  'm004__sl3_c1'
28
30
 
29
- Now pick something not in the kernel
31
+ Now pick something not in the kernel:
32
+
30
33
  >>> c = PtolemyGeneralizedObstructionClass([1,0,0,1])
31
- >>> p=M.ptolemy_variety(N = 3, obstruction_class = c)
34
+ >>> p = M.ptolemy_variety(N=3, obstruction_class=c)
32
35
  Traceback (most recent call last):
33
- ...
36
+ ...
34
37
  AssertionError: PtolemyGeneralizedObstructionClass not in kernel of d2
38
+
35
39
  """
36
-
37
- def __init__(self, H2_class, index = None, N = None, manifold = None):
40
+
41
+ def __init__(self, H2_class, index=None, N=None, manifold=None):
38
42
 
39
43
  self.H2_class = H2_class
40
44
  self._index = index
@@ -42,11 +46,11 @@ class PtolemyGeneralizedObstructionClass(object):
42
46
  self._manifold = manifold
43
47
 
44
48
  def _checkManifoldAndN(self, manifold, N):
45
- if not self._manifold is None:
49
+ if self._manifold is not None:
46
50
  assert manifold == self._manifold, (
47
51
  "PtolemyGeneralizedObstructionClass for wrong manifold")
48
52
 
49
- if not self._N is None:
53
+ if self._N is not None:
50
54
  assert N == self._N, (
51
55
  "PtolemyGeneralizedObstructionClass for wrong N")
52
56
 
@@ -67,7 +71,7 @@ class PtolemyGeneralizedObstructionClass(object):
67
71
  N)), ("PtolemyGeneralizedObstructionClass not in kernel of "
68
72
  "d2")
69
73
 
70
- def _is_non_trivial(self, N):
74
+ def _is_non_trivial(self, N):
71
75
  for h in self.H2_class:
72
76
  if h % N != 0:
73
77
  return True
@@ -96,4 +100,3 @@ class PtolemyGeneralizedObstructionClass(object):
96
100
 
97
101
  def __repr__(self):
98
102
  return "PtolemyGeneralizedObstructionClass(%s)" % self.H2_class
99
-
@@ -1,14 +1,11 @@
1
- from __future__ import print_function
2
-
3
- class PtolemyObstructionClass(object):
4
-
1
+ class PtolemyObstructionClass():
5
2
  """
6
3
  Represents an obstruction cocycle of a pSL(n,C) representation as
7
4
  described in Definition 1.7 of
8
-
5
+
9
6
  Garoufalidis, Thurston, Zickert
10
7
  The Complex Volume of SL(n,C)-Representations of 3-Manifolds
11
- http://arxiv.org/abs/1111.2828
8
+ https://arxiv.org/abs/1111.2828
12
9
 
13
10
  To generate such an obstruction class, call:
14
11
 
@@ -17,14 +14,15 @@ class PtolemyObstructionClass(object):
17
14
  >>> cs = M.ptolemy_obstruction_classes()
18
15
 
19
16
  Print out the values:
17
+
20
18
  >>> for c in cs: print(c)
21
19
  PtolemyObstructionClass(s_0_0 - 1, s_1_0 - 1, s_2_0 - 1, s_3_0 - 1, s_0_0 - s_0_1, s_1_0 - s_3_1, s_2_0 - s_2_1, s_3_0 - s_1_1)
22
20
  PtolemyObstructionClass(s_0_0 + 1, s_1_0 - 1, s_2_0 - 1, s_3_0 + 1, s_0_0 - s_0_1, s_1_0 - s_3_1, s_2_0 - s_2_1, s_3_0 - s_1_1)
23
21
  """
24
-
22
+
25
23
  def __init__(self, manifold, index, H2_element, explain_basis,
26
24
  identified_face_classes):
27
-
25
+
28
26
  self._manifold = manifold
29
27
  self._index = index
30
28
  self._H2_element = H2_element
@@ -32,17 +30,16 @@ class PtolemyObstructionClass(object):
32
30
  self._identified_face_classes = identified_face_classes
33
31
 
34
32
  def H2_element_entry_to_identified_variable(entry, variable):
35
- return ( (-1)**entry, 0, variable, 1)
33
+ return ((-1)**entry, 0, variable, 1)
36
34
 
37
35
  self.identified_variables = (
38
- [ H2_element_entry_to_identified_variable(entry, variable)
39
- for entry, variable in zip(H2_element, explain_basis)]
40
- +
41
- [ (+1, 0, var1, var2)
42
- for sign, power, var1, var2 in self._identified_face_classes])
36
+ [H2_element_entry_to_identified_variable(entry, variable)
37
+ for entry, variable in zip(H2_element, explain_basis)] +
38
+ [(+1, 0, var1, var2)
39
+ for sign, power, var1, var2 in self._identified_face_classes])
43
40
 
44
41
  def _checkManifoldAndN(self, manifold, N):
45
- if not self._manifold is None:
42
+ if self._manifold is not None:
46
43
  assert manifold == self._manifold, (
47
44
  "PtolemyObstructionClass for wrong manifold")
48
45
 
@@ -64,5 +61,4 @@ class PtolemyObstructionClass(object):
64
61
  return var1 + " + " + var2
65
62
 
66
63
  return "PtolemyObstructionClass(%s)" % ', '.join(
67
- [to_string(i) for i in self.identified_variables])
68
-
64
+ to_string(i) for i in self.identified_variables)