snappy 3.0.3__cp38-cp38-macosx_11_0_arm64.whl → 3.2__cp38-cp38-macosx_11_0_arm64.whl

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  1. snappy/CyOpenGL.cpython-38-darwin.so +0 -0
  2. snappy/SnapPy.cpython-38-darwin.so +0 -0
  3. snappy/SnapPyHP.cpython-38-darwin.so +0 -0
  4. snappy/__init__.py +373 -426
  5. snappy/app.py +240 -75
  6. snappy/app_menus.py +93 -78
  7. snappy/browser.py +87 -63
  8. snappy/cache.py +5 -8
  9. snappy/canonical.py +249 -0
  10. snappy/{verify/cusp_shapes.py → cusps/__init__.py} +11 -19
  11. snappy/cusps/cusp_area_matrix.py +101 -0
  12. snappy/{verify/cusp_areas.py → cusps/cusp_areas_from_matrix.py} +39 -54
  13. snappy/cusps/maximal_cusp_area_matrix.py +136 -0
  14. snappy/cusps/test.py +21 -0
  15. snappy/cusps/trig_cusp_area_matrix.py +63 -0
  16. snappy/database.py +40 -31
  17. snappy/db_utilities.py +13 -14
  18. snappy/decorated_isosig.py +377 -133
  19. snappy/dev/extended_ptolemy/complexVolumesClosed.py +42 -9
  20. snappy/dev/extended_ptolemy/extended.py +32 -25
  21. snappy/dev/extended_ptolemy/giac_rur.py +23 -8
  22. snappy/dev/extended_ptolemy/phc_wrapper.py +10 -10
  23. snappy/dev/vericlosed/computeApproxHyperbolicStructureOrb.py +2 -1
  24. snappy/dev/vericlosed/gimbalLoopFinder.py +5 -5
  25. snappy/dev/vericlosed/hyperbolicStructure.py +3 -3
  26. snappy/dev/vericlosed/oneVertexTruncatedComplex.py +2 -2
  27. snappy/dev/vericlosed/truncatedComplex.py +3 -2
  28. snappy/dev/vericlosed/verifyHyperbolicStructureEngine.py +4 -3
  29. snappy/doc/_images/geodesics.jpg +0 -0
  30. snappy/doc/_images/m004_paper_plane_on_systole.jpg +0 -0
  31. snappy/doc/_images/m125_paper_plane.jpg +0 -0
  32. snappy/doc/_images/o9_00000_systole_paper_plane.jpg +0 -0
  33. snappy/doc/_images/o9_00000_systole_paper_plane_closer.jpg +0 -0
  34. snappy/doc/_sources/additional_classes.rst.txt +1 -0
  35. snappy/doc/_sources/credits.rst.txt +6 -1
  36. snappy/doc/_sources/development.rst.txt +69 -50
  37. snappy/doc/_sources/index.rst.txt +101 -66
  38. snappy/doc/_sources/installing.rst.txt +148 -165
  39. snappy/doc/_sources/news.rst.txt +136 -32
  40. snappy/doc/_sources/ptolemy.rst.txt +1 -1
  41. snappy/doc/_sources/ptolemy_examples1.rst.txt +9 -8
  42. snappy/doc/_sources/ptolemy_examples2.rst.txt +3 -3
  43. snappy/doc/_sources/ptolemy_examples3.rst.txt +14 -14
  44. snappy/doc/_sources/ptolemy_prelim.rst.txt +1 -1
  45. snappy/doc/_sources/snap.rst.txt +2 -2
  46. snappy/doc/_sources/snappy.rst.txt +1 -1
  47. snappy/doc/_sources/triangulation.rst.txt +3 -2
  48. snappy/doc/_sources/verify.rst.txt +89 -29
  49. snappy/doc/_sources/verify_internals.rst.txt +5 -16
  50. snappy/doc/_static/SnapPy-horizontal-128.png +0 -0
  51. snappy/doc/_static/SnapPy.ico +0 -0
  52. snappy/doc/_static/_sphinx_javascript_frameworks_compat.js +123 -0
  53. snappy/doc/_static/basic.css +47 -27
  54. snappy/doc/_static/css/badge_only.css +1 -0
  55. snappy/doc/_static/css/fonts/Roboto-Slab-Bold.woff +0 -0
  56. snappy/doc/_static/css/fonts/Roboto-Slab-Bold.woff2 +0 -0
  57. snappy/doc/_static/css/fonts/Roboto-Slab-Regular.woff +0 -0
  58. snappy/doc/_static/css/fonts/Roboto-Slab-Regular.woff2 +0 -0
  59. snappy/doc/_static/css/fonts/fontawesome-webfont.eot +0 -0
  60. snappy/doc/_static/css/fonts/fontawesome-webfont.svg +2671 -0
  61. snappy/doc/_static/css/fonts/fontawesome-webfont.ttf +0 -0
  62. snappy/doc/_static/css/fonts/fontawesome-webfont.woff +0 -0
  63. snappy/doc/_static/css/fonts/fontawesome-webfont.woff2 +0 -0
  64. snappy/doc/_static/css/fonts/lato-bold-italic.woff +0 -0
  65. snappy/doc/_static/css/fonts/lato-bold-italic.woff2 +0 -0
  66. snappy/doc/_static/css/fonts/lato-bold.woff +0 -0
  67. snappy/doc/_static/css/fonts/lato-bold.woff2 +0 -0
  68. snappy/doc/_static/css/fonts/lato-normal-italic.woff +0 -0
  69. snappy/doc/_static/css/fonts/lato-normal-italic.woff2 +0 -0
  70. snappy/doc/_static/css/fonts/lato-normal.woff +0 -0
  71. snappy/doc/_static/css/fonts/lato-normal.woff2 +0 -0
  72. snappy/doc/_static/css/theme.css +4 -0
  73. snappy/doc/_static/doctools.js +107 -274
  74. snappy/doc/_static/documentation_options.js +6 -5
  75. snappy/doc/_static/fonts/Lato/lato-bold.eot +0 -0
  76. snappy/doc/_static/fonts/Lato/lato-bold.ttf +0 -0
  77. snappy/doc/_static/fonts/Lato/lato-bold.woff +0 -0
  78. snappy/doc/_static/fonts/Lato/lato-bold.woff2 +0 -0
  79. snappy/doc/_static/fonts/Lato/lato-bolditalic.eot +0 -0
  80. snappy/doc/_static/fonts/Lato/lato-bolditalic.ttf +0 -0
  81. snappy/doc/_static/fonts/Lato/lato-bolditalic.woff +0 -0
  82. snappy/doc/_static/fonts/Lato/lato-bolditalic.woff2 +0 -0
  83. snappy/doc/_static/fonts/Lato/lato-italic.eot +0 -0
  84. snappy/doc/_static/fonts/Lato/lato-italic.ttf +0 -0
  85. snappy/doc/_static/fonts/Lato/lato-italic.woff +0 -0
  86. snappy/doc/_static/fonts/Lato/lato-italic.woff2 +0 -0
  87. snappy/doc/_static/fonts/Lato/lato-regular.eot +0 -0
  88. snappy/doc/_static/fonts/Lato/lato-regular.ttf +0 -0
  89. snappy/doc/_static/fonts/Lato/lato-regular.woff +0 -0
  90. snappy/doc/_static/fonts/Lato/lato-regular.woff2 +0 -0
  91. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.eot +0 -0
  92. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.ttf +0 -0
  93. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.woff +0 -0
  94. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.woff2 +0 -0
  95. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.eot +0 -0
  96. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.ttf +0 -0
  97. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.woff +0 -0
  98. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.woff2 +0 -0
  99. snappy/doc/_static/jquery.js +2 -2
  100. snappy/doc/_static/js/badge_only.js +1 -0
  101. snappy/doc/_static/js/theme.js +1 -0
  102. snappy/doc/_static/js/versions.js +228 -0
  103. snappy/doc/_static/language_data.js +3 -101
  104. snappy/doc/_static/pygments.css +1 -0
  105. snappy/doc/_static/searchtools.js +489 -398
  106. snappy/doc/_static/snappy_furo.css +33 -0
  107. snappy/doc/_static/snappy_sphinx_rtd_theme.css +42 -0
  108. snappy/doc/_static/sphinx_highlight.js +154 -0
  109. snappy/doc/additional_classes.html +688 -263
  110. snappy/doc/bugs.html +107 -94
  111. snappy/doc/censuses.html +155 -127
  112. snappy/doc/credits.html +115 -104
  113. snappy/doc/development.html +184 -146
  114. snappy/doc/genindex.html +287 -204
  115. snappy/doc/index.html +189 -150
  116. snappy/doc/installing.html +259 -266
  117. snappy/doc/manifold.html +1626 -592
  118. snappy/doc/manifoldhp.html +119 -105
  119. snappy/doc/news.html +198 -104
  120. snappy/doc/objects.inv +0 -0
  121. snappy/doc/other.html +117 -105
  122. snappy/doc/platonic_census.html +161 -114
  123. snappy/doc/plink.html +113 -105
  124. snappy/doc/ptolemy.html +131 -108
  125. snappy/doc/ptolemy_classes.html +242 -223
  126. snappy/doc/ptolemy_examples1.html +144 -130
  127. snappy/doc/ptolemy_examples2.html +141 -129
  128. snappy/doc/ptolemy_examples3.html +148 -132
  129. snappy/doc/ptolemy_examples4.html +131 -111
  130. snappy/doc/ptolemy_prelim.html +162 -138
  131. snappy/doc/py-modindex.html +104 -69
  132. snappy/doc/screenshots.html +117 -108
  133. snappy/doc/search.html +115 -84
  134. snappy/doc/searchindex.js +1 -1
  135. snappy/doc/snap.html +109 -96
  136. snappy/doc/snappy.html +134 -97
  137. snappy/doc/spherogram.html +259 -187
  138. snappy/doc/todo.html +107 -94
  139. snappy/doc/triangulation.html +1380 -111
  140. snappy/doc/tutorial.html +107 -94
  141. snappy/doc/verify.html +194 -125
  142. snappy/doc/verify_internals.html +248 -686
  143. snappy/drilling/__init__.py +456 -0
  144. snappy/drilling/barycentric.py +103 -0
  145. snappy/drilling/constants.py +5 -0
  146. snappy/drilling/crush.py +270 -0
  147. snappy/drilling/cusps.py +125 -0
  148. snappy/drilling/debug.py +242 -0
  149. snappy/drilling/epsilons.py +6 -0
  150. snappy/drilling/exceptions.py +55 -0
  151. snappy/drilling/moves.py +620 -0
  152. snappy/drilling/peripheral_curves.py +210 -0
  153. snappy/drilling/perturb.py +188 -0
  154. snappy/drilling/shorten.py +36 -0
  155. snappy/drilling/subdivide.py +274 -0
  156. snappy/drilling/test.py +23 -0
  157. snappy/drilling/test_cases.py +126 -0
  158. snappy/drilling/tracing.py +351 -0
  159. snappy/exceptions.py +23 -3
  160. snappy/export_stl.py +20 -14
  161. snappy/exterior_to_link/__init__.py +2 -0
  162. snappy/exterior_to_link/barycentric_geometry.py +463 -0
  163. snappy/exterior_to_link/exceptions.py +6 -0
  164. snappy/exterior_to_link/geodesic_map.json +14408 -0
  165. snappy/exterior_to_link/hyp_utils.py +112 -0
  166. snappy/exterior_to_link/link_projection.py +323 -0
  167. snappy/exterior_to_link/main.py +197 -0
  168. snappy/exterior_to_link/mcomplex_with_expansion.py +261 -0
  169. snappy/exterior_to_link/mcomplex_with_link.py +687 -0
  170. snappy/exterior_to_link/mcomplex_with_memory.py +162 -0
  171. snappy/exterior_to_link/pl_utils.py +491 -0
  172. snappy/exterior_to_link/put_in_S3.py +156 -0
  173. snappy/exterior_to_link/rational_linear_algebra.py +123 -0
  174. snappy/exterior_to_link/rational_linear_algebra_wrapped.py +135 -0
  175. snappy/exterior_to_link/simplify_to_base_tri.py +114 -0
  176. snappy/exterior_to_link/stored_moves.py +475 -0
  177. snappy/exterior_to_link/test.py +31 -0
  178. snappy/geometric_structure/__init__.py +212 -0
  179. snappy/geometric_structure/cusp_neighborhood/__init__.py +3 -0
  180. snappy/geometric_structure/cusp_neighborhood/complex_cusp_cross_section.py +697 -0
  181. snappy/geometric_structure/cusp_neighborhood/cusp_cross_section_base.py +484 -0
  182. snappy/geometric_structure/cusp_neighborhood/exceptions.py +42 -0
  183. snappy/geometric_structure/cusp_neighborhood/real_cusp_cross_section.py +298 -0
  184. snappy/geometric_structure/cusp_neighborhood/tiles_for_cusp_neighborhood.py +159 -0
  185. snappy/geometric_structure/cusp_neighborhood/vertices.py +32 -0
  186. snappy/geometric_structure/geodesic/__init__.py +0 -0
  187. snappy/geometric_structure/geodesic/add_core_curves.py +152 -0
  188. snappy/geometric_structure/geodesic/avoid_core_curves.py +369 -0
  189. snappy/geometric_structure/geodesic/canonical_keys.py +52 -0
  190. snappy/geometric_structure/geodesic/check_away_from_core_curve.py +60 -0
  191. snappy/geometric_structure/geodesic/constants.py +6 -0
  192. snappy/geometric_structure/geodesic/exceptions.py +22 -0
  193. snappy/geometric_structure/geodesic/fixed_points.py +93 -0
  194. snappy/geometric_structure/geodesic/geodesic_start_point_info.py +435 -0
  195. snappy/geometric_structure/geodesic/graph_trace_helper.py +67 -0
  196. snappy/geometric_structure/geodesic/line.py +30 -0
  197. snappy/geometric_structure/geodesic/multiplicity.py +127 -0
  198. snappy/geometric_structure/geodesic/tiles_for_geodesic.py +101 -0
  199. snappy/geometric_structure/test.py +22 -0
  200. snappy/gui.py +36 -36
  201. snappy/horoviewer.py +50 -48
  202. snappy/hyperboloid/__init__.py +212 -0
  203. snappy/hyperboloid/distances.py +245 -0
  204. snappy/hyperboloid/horoball.py +19 -0
  205. snappy/hyperboloid/line.py +35 -0
  206. snappy/hyperboloid/point.py +9 -0
  207. snappy/hyperboloid/triangle.py +29 -0
  208. snappy/{infodialog.py → infowindow.py} +32 -33
  209. snappy/isometry_signature.py +382 -0
  210. snappy/len_spec/__init__.py +596 -0
  211. snappy/len_spec/geodesic_info.py +110 -0
  212. snappy/len_spec/geodesic_key_info_dict.py +117 -0
  213. snappy/len_spec/geodesic_piece.py +143 -0
  214. snappy/len_spec/geometric_structure.py +182 -0
  215. snappy/len_spec/geometry.py +80 -0
  216. snappy/len_spec/length_spectrum_geodesic_info.py +170 -0
  217. snappy/len_spec/spine.py +206 -0
  218. snappy/len_spec/test.py +24 -0
  219. snappy/len_spec/test_cases.py +69 -0
  220. snappy/len_spec/tile.py +275 -0
  221. snappy/len_spec/word.py +86 -0
  222. snappy/manifolds/__init__.py +1 -1
  223. snappy/math_basics.py +176 -0
  224. snappy/matrix.py +525 -0
  225. snappy/number.py +97 -21
  226. snappy/numeric_output_checker.py +37 -27
  227. snappy/pari.py +30 -69
  228. snappy/phone_home.py +25 -20
  229. snappy/polyviewer.py +39 -37
  230. snappy/ptolemy/__init__.py +4 -6
  231. snappy/ptolemy/component.py +14 -12
  232. snappy/ptolemy/coordinates.py +312 -295
  233. snappy/ptolemy/fieldExtensions.py +14 -12
  234. snappy/ptolemy/findLoops.py +43 -31
  235. snappy/ptolemy/geometricRep.py +24 -26
  236. snappy/ptolemy/homology.py +12 -7
  237. snappy/ptolemy/manifoldMethods.py +69 -70
  238. snappy/ptolemy/matrix.py +65 -26
  239. snappy/ptolemy/numericalSolutionsToGroebnerBasis.py +18 -14
  240. snappy/ptolemy/polynomial.py +125 -119
  241. snappy/ptolemy/processComponents.py +36 -30
  242. snappy/ptolemy/processFileBase.py +79 -18
  243. snappy/ptolemy/processFileDispatch.py +13 -14
  244. snappy/ptolemy/processMagmaFile.py +44 -39
  245. snappy/ptolemy/processRurFile.py +18 -11
  246. snappy/ptolemy/ptolemyGeneralizedObstructionClass.py +20 -17
  247. snappy/ptolemy/ptolemyObstructionClass.py +13 -17
  248. snappy/ptolemy/ptolemyVariety.py +190 -121
  249. snappy/ptolemy/ptolemyVarietyPrimeIdealGroebnerBasis.py +20 -19
  250. snappy/ptolemy/reginaWrapper.py +25 -29
  251. snappy/ptolemy/rur.py +6 -14
  252. snappy/ptolemy/solutionsToPrimeIdealGroebnerBasis.py +27 -22
  253. snappy/ptolemy/test.py +247 -188
  254. snappy/ptolemy/utilities.py +41 -43
  255. snappy/raytracing/__init__.py +64 -0
  256. snappy/raytracing/additional_horospheres.py +64 -0
  257. snappy/raytracing/additional_len_spec_choices.py +63 -0
  258. snappy/raytracing/cohomology_fractal.py +10 -6
  259. snappy/raytracing/eyeball.py +123 -0
  260. snappy/raytracing/finite_raytracing_data.py +48 -38
  261. snappy/raytracing/finite_viewer.py +218 -210
  262. snappy/raytracing/geodesic_tube_info.py +174 -0
  263. snappy/raytracing/geodesics.py +246 -0
  264. snappy/raytracing/geodesics_window.py +258 -0
  265. snappy/raytracing/gui_utilities.py +152 -40
  266. snappy/raytracing/hyperboloid_navigation.py +102 -52
  267. snappy/raytracing/hyperboloid_utilities.py +114 -261
  268. snappy/raytracing/ideal_raytracing_data.py +256 -179
  269. snappy/raytracing/inside_viewer.py +522 -253
  270. snappy/raytracing/pack.py +22 -0
  271. snappy/raytracing/raytracing_data.py +46 -34
  272. snappy/raytracing/raytracing_view.py +190 -109
  273. snappy/raytracing/shaders/Eye.png +0 -0
  274. snappy/raytracing/shaders/NonGeometric.png +0 -0
  275. snappy/raytracing/shaders/__init__.py +60 -4
  276. snappy/raytracing/shaders/fragment.glsl +575 -148
  277. snappy/raytracing/test.py +29 -0
  278. snappy/raytracing/tooltip.py +146 -0
  279. snappy/raytracing/upper_halfspace_utilities.py +98 -0
  280. snappy/raytracing/view_scale_controller.py +98 -0
  281. snappy/raytracing/zoom_slider/__init__.py +32 -29
  282. snappy/raytracing/zoom_slider/test.py +2 -0
  283. snappy/sage_helper.py +69 -123
  284. snappy/{preferences.py → settings.py} +167 -145
  285. snappy/shell.py +4 -0
  286. snappy/snap/__init__.py +12 -8
  287. snappy/snap/character_varieties.py +24 -18
  288. snappy/snap/find_field.py +35 -34
  289. snappy/snap/fundamental_polyhedron.py +99 -85
  290. snappy/snap/generators.py +6 -8
  291. snappy/snap/interval_reps.py +18 -6
  292. snappy/snap/kernel_structures.py +8 -3
  293. snappy/snap/mcomplex_base.py +1 -2
  294. snappy/snap/nsagetools.py +107 -53
  295. snappy/snap/peripheral/__init__.py +1 -1
  296. snappy/snap/peripheral/dual_cellulation.py +15 -7
  297. snappy/snap/peripheral/link.py +20 -16
  298. snappy/snap/peripheral/peripheral.py +22 -14
  299. snappy/snap/peripheral/surface.py +47 -50
  300. snappy/snap/peripheral/test.py +8 -8
  301. snappy/snap/polished_reps.py +65 -40
  302. snappy/snap/shapes.py +41 -22
  303. snappy/snap/slice_obs_HKL.py +64 -25
  304. snappy/snap/t3mlite/arrow.py +88 -51
  305. snappy/snap/t3mlite/corner.py +5 -6
  306. snappy/snap/t3mlite/edge.py +32 -21
  307. snappy/snap/t3mlite/face.py +7 -9
  308. snappy/snap/t3mlite/files.py +31 -23
  309. snappy/snap/t3mlite/homology.py +14 -10
  310. snappy/snap/t3mlite/linalg.py +158 -56
  311. snappy/snap/t3mlite/mcomplex.py +739 -291
  312. snappy/snap/t3mlite/perm4.py +236 -84
  313. snappy/snap/t3mlite/setup.py +9 -10
  314. snappy/snap/t3mlite/simplex.py +65 -48
  315. snappy/snap/t3mlite/spun.py +42 -30
  316. snappy/snap/t3mlite/surface.py +45 -45
  317. snappy/snap/t3mlite/test.py +3 -0
  318. snappy/snap/t3mlite/test_vs_regina.py +17 -13
  319. snappy/snap/t3mlite/tetrahedron.py +25 -24
  320. snappy/snap/t3mlite/vertex.py +8 -13
  321. snappy/snap/test.py +45 -52
  322. snappy/snap/utilities.py +66 -65
  323. snappy/test.py +155 -158
  324. snappy/test_cases.py +263 -0
  325. snappy/testing.py +131 -0
  326. snappy/tiling/__init__.py +2 -0
  327. snappy/tiling/canonical_key_dict.py +59 -0
  328. snappy/tiling/dict_based_set.py +79 -0
  329. snappy/tiling/floor.py +49 -0
  330. snappy/tiling/hyperboloid_dict.py +54 -0
  331. snappy/tiling/iter_utils.py +78 -0
  332. snappy/tiling/lifted_tetrahedron.py +22 -0
  333. snappy/tiling/lifted_tetrahedron_set.py +54 -0
  334. snappy/tiling/real_hash_dict.py +164 -0
  335. snappy/tiling/test.py +23 -0
  336. snappy/tiling/tile.py +215 -0
  337. snappy/tiling/triangle.py +33 -0
  338. snappy/tkterminal.py +313 -203
  339. snappy/twister/main.py +1 -8
  340. snappy/twister/twister_core.cpython-38-darwin.so +0 -0
  341. snappy/upper_halfspace/__init__.py +146 -0
  342. snappy/upper_halfspace/ideal_point.py +26 -0
  343. snappy/verify/__init__.py +4 -8
  344. snappy/verify/{verifyCanonical.py → canonical.py} +114 -97
  345. snappy/verify/complex_volume/__init__.py +3 -2
  346. snappy/verify/complex_volume/adjust_torsion.py +13 -11
  347. snappy/verify/complex_volume/closed.py +29 -24
  348. snappy/verify/complex_volume/compute_ptolemys.py +8 -6
  349. snappy/verify/complex_volume/cusped.py +10 -9
  350. snappy/verify/complex_volume/extended_bloch.py +14 -12
  351. snappy/verify/{cuspTranslations.py → cusp_translations.py} +15 -14
  352. snappy/verify/edge_equations.py +80 -0
  353. snappy/verify/exceptions.py +23 -56
  354. snappy/verify/{verifyHyperbolicity.py → hyperbolicity.py} +19 -15
  355. snappy/verify/interval_newton_shapes_engine.py +51 -211
  356. snappy/verify/interval_tree.py +27 -25
  357. snappy/verify/krawczyk_shapes_engine.py +47 -50
  358. snappy/verify/maximal_cusp_area_matrix/__init__.py +17 -86
  359. snappy/verify/maximal_cusp_area_matrix/cusp_tiling_engine.py +58 -48
  360. snappy/verify/maximal_cusp_area_matrix/cusp_translate_engine.py +53 -57
  361. snappy/verify/{realAlgebra.py → real_algebra.py} +26 -20
  362. snappy/verify/shapes.py +10 -7
  363. snappy/verify/short_slopes.py +41 -42
  364. snappy/verify/{squareExtensions.py → square_extensions.py} +96 -92
  365. snappy/verify/test.py +59 -57
  366. snappy/verify/upper_halfspace/extended_matrix.py +5 -5
  367. snappy/verify/upper_halfspace/finite_point.py +44 -31
  368. snappy/verify/upper_halfspace/ideal_point.py +69 -57
  369. snappy/verify/volume.py +15 -12
  370. snappy/version.py +2 -3
  371. {snappy-3.0.3.dist-info → snappy-3.2.dist-info}/METADATA +14 -12
  372. snappy-3.2.dist-info/RECORD +503 -0
  373. {snappy-3.0.3.dist-info → snappy-3.2.dist-info}/WHEEL +1 -1
  374. {snappy-3.0.3.dist-info → snappy-3.2.dist-info}/entry_points.txt +0 -1
  375. {snappy-3.0.3.dist-info → snappy-3.2.dist-info}/top_level.txt +10 -1
  376. snappy/doc/_sources/verify_canon.rst.txt +0 -90
  377. snappy/doc/_static/classic.css +0 -266
  378. snappy/doc/_static/jquery-3.5.1.js +0 -10872
  379. snappy/doc/_static/sidebar.js +0 -159
  380. snappy/doc/_static/underscore-1.13.1.js +0 -2042
  381. snappy/doc/_static/underscore.js +0 -6
  382. snappy/doc/verify_canon.html +0 -283
  383. snappy/ppm_to_png.py +0 -243
  384. snappy/togl/__init__.py +0 -3
  385. snappy/togl/darwin-tk8.6/Togl2.1/LICENSE +0 -28
  386. snappy/togl/darwin-tk8.6/Togl2.1/libTogl2.1.dylib +0 -0
  387. snappy/togl/darwin-tk8.6/Togl2.1/pkgIndex.tcl +0 -5
  388. snappy/togl/linux2-x86_64-tk8.6/Togl2.1/LICENSE +0 -28
  389. snappy/togl/linux2-x86_64-tk8.6/Togl2.1/libTogl2.1.so +0 -0
  390. snappy/togl/linux2-x86_64-tk8.6/Togl2.1/pkgIndex.tcl +0 -5
  391. snappy/togl/win32VC-tk8.6/Togl2.1/LICENSE +0 -28
  392. snappy/togl/win32VC-tk8.6/Togl2.1/Togl21.dll +0 -0
  393. snappy/togl/win32VC-tk8.6/Togl2.1/Togl21.lib +0 -0
  394. snappy/togl/win32VC-tk8.6/Togl2.1/pkgIndex.tcl +0 -6
  395. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/LICENSE +0 -28
  396. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/Togl21.dll +0 -0
  397. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/Togl21.lib +0 -0
  398. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/pkgIndex.tcl +0 -6
  399. snappy/verify/cuspCrossSection.py +0 -1413
  400. snappy/verify/mathHelpers.py +0 -64
  401. snappy-3.0.3.dist-info/RECORD +0 -360
@@ -4,9 +4,113 @@
4
4
  News
5
5
  ====
6
6
 
7
+
8
+ * Version 3.2 (January 2025):
9
+
10
+ - An alternative implementation of the length spectrum. It supports verified
11
+ computations and is significantly faster in some cases. See
12
+ :meth:`length_spectrum_alt <snappy.Manifold.length_spectrum_alt>`
13
+ and
14
+ :meth:`length_spectrum_alt_gen <snappy.Manifold.length_spectrum_alt_gen>`.
15
+
16
+ - :meth:`isometry_signature <snappy.Manifold.isometry_signature>` now also
17
+ works for closed manifolds.
18
+
19
+ - A paper plane or eye ball in the
20
+ :meth:`inside_view <snappy.Manifold.inside_view>` showing the position
21
+ and bearing of the user in the hyperbolic manifold. By default, we now show
22
+ the paper plane instead of the edges of the triangulation so that the view
23
+ is intrinsic to the manifold. The geodesics window now also features a
24
+ button to put the camera onto a geodesic. Here are some examples:
25
+
26
+ .. list-table::
27
+ :width: 100%
28
+ :class: borderless
29
+
30
+ * - .. image:: images/o9_00000_systole_paper_plane.jpg
31
+ :width: 90%
32
+ :align: center
33
+ :alt: Paper plane near shortest geodesic of o9_00000
34
+ - .. image:: images/o9_00000_systole_paper_plane_closer.jpg
35
+ :width: 90%
36
+ :align: center
37
+ :alt: Paper plane very near shortest geodesic of o9_00000
38
+ - .. image:: images/m004_paper_plane_on_systole.jpg
39
+ :width: 90%
40
+ :align: center
41
+ :alt: Paper plane on shortest geodesic of m004
42
+ - .. image:: images/m125_paper_plane.jpg
43
+ :width: 90%
44
+ :align: center
45
+ :alt: Paper plane coming out of a cusp of m125
46
+
47
+ - A faster and more robust algorithm to the compute maximal cusp area matrix.
48
+ The new algorithm is now the default for
49
+ :meth:`~snappy.Manifold.cusp_area_matrix`,
50
+ :meth:`~snappy.Manifold.cusp_areas`,
51
+ :meth:`~snappy.Manifold.short_slopes` and
52
+ :meth:`~snappy.Manifold.cusp_translations`.
53
+
54
+ - New options ``ignore_curves`` and ``ignore_filling_orientations``
55
+ for :meth:`~snappy.Triangulation.triangulation_isosig`. Also
56
+ fixing a subtle bug where the filling coefficients returned by
57
+ :meth:`triangulation_isosig <snappy.Triangulation.triangulation_isosig>` were
58
+ not canonical when ``ignore_curve_orientations = True``.
59
+
60
+ - :meth:`~snappy.Manifold.canonical_retriangulation`
61
+ and
62
+ :meth:`~snappy.Manifold.isometry_signature` fail with
63
+ exceptions rather than silently returning ``None``. In particular, it now
64
+ safe to compare isometry signatures (without further checks) to determine
65
+ whether M and N are isometric hyperbolic manifolds::
66
+
67
+ >>> M.isometry_signature(verified=True) == N.isometry_signature(verified=True)
68
+
69
+ - Bug fix to :meth:`slice_obstruction_HKL
70
+ <snappy.Manifold.slice_obstruction_HKL>`: earlier versions
71
+ incorrectly allowed looking at mod 2 homology of the branched
72
+ cover, where the theory does not directly apply.
73
+
74
+ - New self-contained SnapPy application for Linux.
75
+
76
+ - Support for Python 3.13 and SageMath 10.5.
77
+
78
+
79
+ * Versions 3.1 (May 2023) and 3.1.1 (June 2023):
80
+
81
+ - A method :meth:`exterior_to_link <snappy.Manifold.exterior_to_link>`
82
+ for going from a link exterior to a link diagram taken from
83
+ `Dunfield-Obeidin-Rudd <https://arxiv.org/abs/2112.03251>`_.
84
+
85
+ - Covers now computed by the stand-alone `low_index
86
+ <https://pypi.org/project/low-index/>`_ module, which uses
87
+ multiple processor cores and is typically much faster than the old
88
+ code. In some cases, it is dramatically faster than even GAP or
89
+ Magma.
90
+
91
+ - Added geodesics to the :meth:`inside_view
92
+ <snappy.Manifold.inside_view>`.
93
+
94
+ - Added drilling any simple geodesic with :meth:`drill_word
95
+ <snappy.Manifold.drill_word>` and :meth:`drill_words
96
+ <snappy.Manifold.drill_words>`, not just those that are
97
+ :meth:`combinatorially simple <snappy.Manifold.dual_curves>`.
98
+
99
+ - Added `ignore_orientation` flag to :meth:`triangulation_isosig
100
+ <snappy.Triangulation.triangulation_isosig>`.
101
+
102
+ - Added `include_words` flag to :meth:`length_spectrum
103
+ <snappy.Manifold.length_spectrum>` for getting the word
104
+ corresponding to a geodesic which can be given to
105
+ :meth:`drill_word <snappy.Manifold.drill_word>`.
106
+
107
+ - Support for Python 3.11 and SageMath 10.0.
108
+
109
+ - Modernized styling of the documentation.
110
+
7
111
  * Version 3.0.3 (December 2021):
8
112
 
9
- - Runs natively on Macs with Apple Silicon processors (M1, M1 Pro, M1 Max).
113
+ - Runs natively on Macs with Apple Silicon processors (M1, M2, and variants).
10
114
 
11
115
  * Version 3.0.2 (November 2021):
12
116
 
@@ -47,7 +151,7 @@ News
47
151
 
48
152
  * Version 2.8 (June 2020): New features include:
49
153
 
50
- - Raytraced interior views of a hyperbolic 3-manifold via the
154
+ - Raytraced interior views of a hyperbolic 3-manifold via the
51
155
  :meth:`inside_view <snappy.Manifold.inside_view>` method, see also
52
156
  `images <https://im.icerm.brown.edu/portfolio/snappy-views/>`_ and
53
157
  `demo video <https://youtu.be/CAERhmUCkRs>`_.
@@ -57,13 +161,13 @@ News
57
161
  * Complex volume (and thus the Chern-Simons invariant) for both
58
162
  cusped and closed manifolds, see
59
163
  :meth:`complex_volume <snappy.Manifold.complex_volume>`.
60
-
164
+
61
165
  * Disjoint cusp neighborhoods by the method :meth:`cusp_areas
62
166
  <snappy.Manifold.cusp_areas>` which uses
63
167
  :meth:`cusp_area_matrix <snappy.Manifold.cusp_area_matrix>`.
64
168
 
65
169
  * Cusp shapes (see :meth:`cusp_info <snappy.Manifold.cusp_info>`).
66
-
170
+
67
171
  * Finding all :meth:`short_slopes <snappy.Manifold.short_slopes>`
68
172
  in disjoint embedded cusp neighborhoods.
69
173
 
@@ -95,7 +199,7 @@ News
95
199
  - GUI improvements, especially on macOS. These include improved
96
200
  support for dark mode and tabs on macOS Mojave and preliminary
97
201
  support for macOS Catalina.
98
-
202
+
99
203
  * Version 2.6.1 (August 2018): New features include:
100
204
 
101
205
  - Support for SageMath 8.3, Python 3.7, and macOS Mojave.
@@ -105,7 +209,7 @@ News
105
209
  Contributed by Jean-Philippe Burelle, based on `this paper
106
210
  <https://arxiv.org/abs/1703.08241>`_.
107
211
 
108
- - Many bug fixes.
212
+ - Many bug fixes.
109
213
 
110
214
  * Version 2.6 (Nov 2017): New features include:
111
215
 
@@ -122,23 +226,23 @@ News
122
226
  - STL export of Dirichlet domains for 3D printing, contributed by
123
227
  Jose Sanchez.
124
228
 
125
- - Support for Python 3, SageMath 7.5, 7.6, and 8.0, and many more
229
+ - Support for Python 3, SageMath 7.5, 7.6, and 8.0, and many more
126
230
  versions of Python on Windows.
127
231
 
128
232
  - Much improved infrastructure for testing and distributing SnapPy.
129
233
 
130
234
  * Version 2.4 (May 2016): New features include:
131
235
 
132
- - Added `census of Platonic manifolds <platonic_census.html>`_.
236
+ - Added `census of Platonic manifolds <platonic_census.html>`_.
237
+
238
+ - Rigorous computation of `cusp translations <manifold.html#snappy.Manifold.cusp_translations>`_.
133
239
 
134
- - Rigorous computation of `cusp translations <manifold.html#snappy.Manifold.cusp_translations>`_.
135
-
136
240
  - Added decorations to `triangulation isomorphism signatures
137
241
  <manifold.html#snappy.Manifold.triangulation_isosig>`_ for
138
242
  encoding peripheral curves.
139
-
243
+
140
244
  - Faster verification of non-tetrahedral canonical cell decompositions.
141
-
245
+
142
246
  - Improvements to the `link and planar diagram component
143
247
  <spherogram.html>`_, mostly contributed by Malik Obeidin, include:
144
248
 
@@ -153,9 +257,9 @@ News
153
257
  * Conversion to/from `SageMath links and braids
154
258
  <spherogram.html#spherogram.Link.sage_link>`_.
155
259
 
156
- * Many under-the-hood improvements.
157
-
158
- - New Windows installer.
260
+ * Many under-the-hood improvements.
261
+
262
+ - New Windows installer.
159
263
 
160
264
  * Version 2.3 (March 2015): New features include:
161
265
 
@@ -169,9 +273,9 @@ News
169
273
  - New extra features when used inside of Sage:
170
274
 
171
275
  * HIKMOT-style `rigorous verification of hyperbolic structures
172
- <verify.html>`_,
173
- contributed by Matthias Goerner.
174
-
276
+ <verify.html>`_,
277
+ contributed by Matthias Goerner.
278
+
175
279
  * Many `basic knot/link invariants
176
280
  <spherogram.html#the-link-class>`_, contributed by Robert
177
281
  Lipschitz and Jennet Dickinson.
@@ -179,19 +283,19 @@ News
179
283
  * Sage-specific functions are now more easily accessible as
180
284
  methods of Manifold and better documented.
181
285
 
182
- * Improved number field recognition, thanks to Matthias.
183
-
286
+ * Improved number field recognition, thanks to Matthias.
287
+
184
288
  - Better compatibility with OS X Yosemite and Windows 8.1.
185
289
 
186
290
  - Development changes:
187
291
 
188
- * Major source code reorganization/cleanup.
292
+ * Major source code reorganization/cleanup.
189
293
 
190
294
  * Source code repository moved to `Bitbucket
191
295
  <https://bitbucket.org/t3m>`_.
192
296
 
193
297
  * Python modules now hosted on `PyPI
194
- <https://pypi.python.org/pypi>`_, simplifying `installation <installing.html>`_.
298
+ <https://pypi.python.org/pypi>`_, simplifying `installation <installing.html>`_.
195
299
 
196
300
  * Version 2.2 (June 2014): Includes Ben Burton's `census of
197
301
  orientable cusped manifolds with 9 tetrahedra. <http://arxiv.org/abs/1405.2695>`_
@@ -204,24 +308,24 @@ News
204
308
  * Version 2.0 (September 2013): Many new features, including:
205
309
 
206
310
  - A `manifold browser <manifold.html#snappy.Manifold.browse>`_
207
- window for easily examining a particular manifold.
311
+ window for easily examining a particular manifold.
208
312
 
209
313
  - Many improvements to the `link editor <plink.html#using-snappy-s-link-editor>`_, including
210
314
 
211
315
  * A smoothed view mode with image export to EPS/PDF/SVG/TikZ.
212
316
 
213
317
  * Producing a fully editable link from combinatorial data like a DT
214
- code.
215
-
318
+ code.
319
+
216
320
  - `Splitting manifolds <manifold.html#snappy.Manifold.split>`_ along surfaces of non-negative euler
217
- characteristic.
321
+ characteristic.
218
322
 
219
323
  - Generalizing the ptolemy obstruction class to allow computation of
220
324
  PGL(3,C)-representations and improving usability of the `ptolemy module
221
- <http://www.unhyperbolic.org/ptolemy.html>`_.
325
+ <http://www.unhyperbolic.org/ptolemy.html>`_.
222
326
 
223
327
  - `CensusKnots <censuses.html#snappy.CensusKnots>`_ now includes
224
- knot exteriors with 8 tetrahedra.
328
+ knot exteriors with 8 tetrahedra.
225
329
 
226
330
  * Version 1.8 (May 2013) improves handling of DT codes and adds the
227
331
  `HTLinkExteriors <censuses.html#snappy.HTLinkExteriors>`_ census,
@@ -229,13 +333,13 @@ News
229
333
 
230
334
  * Version 1.7 (November 2012) incorporates the `ptolemy module
231
335
  <http://www.unhyperbolic.org/ptolemy.html>`_ for studying
232
- representations of 3-manifold groups into pSL(*N*, **C**).
336
+ representations of 3-manifold groups into pSL(*N*, **C**).
233
337
 
234
338
  * Version 1.6 (August 2012) includes a `new way to make links
235
- <spherogram.html>`_ and some support for `arbitrary precision calculation <snap.html>`_.
339
+ <spherogram.html>`_ and some support for `arbitrary precision calculation <snap.html>`_.
236
340
 
237
341
  * Version 1.5 (February 2012) includes `much improved manifold
238
- censuses <censuses.html>`_.
342
+ censuses <censuses.html>`_.
239
343
 
240
344
  * Version 1.4 (December 2011) uses the current release of IPython, which has been completely rewritten.
241
345
 
@@ -248,4 +352,4 @@ News
248
352
 
249
353
  * Version 1.1 (February 2010).
250
354
 
251
- * Version 1.0 (August 2009) Initial version.
355
+ * Version 1.0 (August 2009) Initial version.
@@ -32,7 +32,7 @@ Examples of what the Ptolemy module can do:
32
32
  * Compute the matrices for these representations :ref:`exactly <ptolemy-example-matrices>` or :ref:`numerically <ptolemy-example-numerical-matrix>` given a generator of or word in the fundamental group.
33
33
  * Compute the :ref:`traces <ptolemy-example-traces>` for these matrices.
34
34
  * Compute the :ref:`trace field <ptolemy-examples-trace-field>` of the representation.
35
- * Compute the :ref:`boundary holonomoy <ptolemy-example-boundary-holonomy>`.
35
+ * Compute the :ref:`boundary holonomy <ptolemy-example-boundary-holonomy>`.
36
36
  * Compute the corresponding :ref:`shape parameters/cross ratios <ptolemy-example-cross-ratios>` for a representation.
37
37
  * Compute the :ref:`volume <ptolemy-example-volume>` and :ref:`complex volume <ptolemy-example-complex-volume>` (volume + i Chern-Simons) for a representation.
38
38
  * Compute solutions to the Ptolemy varieties :ref:`using magma or sage <ptolemy-example-using-magma-sage>`.
@@ -146,7 +146,7 @@ Compute the matrices for a representation
146
146
 
147
147
  **Remark:** Requires SnapPy 2.3 or later.
148
148
 
149
- Given a solution as above, we can take a word in the fundamental group and get its image under the representation using ``evaluate_word``. Here, we do it for the two generators::
149
+ Given a solution as above, we can take a word in the fundamental group and get its image under the representation using :py:meth:`~snappy.ptolemy.coordinates.PtolemyCoordinates.evaluate_word`. Here, we do it for the two generators::
150
150
 
151
151
  >>> M = Manifold("m003")
152
152
  >>> sol = M.ptolemy_variety(2).retrieve_solutions()[0]
@@ -156,16 +156,17 @@ Given a solution as above, we can take a word in the fundamental group and get i
156
156
  [[Mod(x, x^2 - x - 1), Mod(x, x^2 - x - 1)],
157
157
  [Mod(-x, x^2 - x - 1), Mod(-1, x^2 - x - 1)]]
158
158
 
159
- By default, this word is with respect to the presentation of the fundamental group that SnapPy computes when given no further arguments. Thus, we expect the identity matrix when we evaluate a relator (for PSL(*N*, **C**) the diagonal element will be an *N*-th root of unity)::
159
+ By default, this word is with respect to the unsimplified presentation of the fundamental group. Thus, we expect the identity matrix when we evaluate a relator (for PSL(*N*, **C**) the diagonal element will be an *N*-th root of unity)::
160
160
 
161
- >>> M.fundamental_group()
161
+ >>> M.fundamental_group(simplify_presentation=False)
162
162
  Generators:
163
- a,b
163
+ a,b,c
164
164
  Relators:
165
- abAAbabbb
166
- >>> sol.evaluate_word('abAAbabbb')
165
+ BCaC
166
+ AbCbA
167
+ >>> sol.evaluate_word('BCaC')
167
168
  [[Mod(1, x^2 - x - 1), 0], [0, Mod(1, x^2 - x - 1)]]
168
-
169
+
169
170
  We revisit computing the matrices :ref:`here <ptolemy-detailed-example-matrices>` to explain how to use a different presentation of the fundamental group.
170
171
 
171
172
  **Remark:** The matrices are currently returned as a list of list of pari ``POLMOD`` objects. In the future, the ptolemy module should return the matrices as sage matrices over a `sage NumberField <http://doc.sagemath.org/html/en/reference/number_fields/sage/rings/number_field/number_field.html>`_.
@@ -268,7 +269,7 @@ Here is python code to iterate over all obstruction classes:
268
269
 
269
270
  >>> for p in Manifold("m003").ptolemy_variety(2,'all'):
270
271
  ... sols = p.retrieve_solutions(verbose=False)
271
- ... print sols.volume_numerical()
272
+ ... print(sols.volume_numerical())
272
273
  [[0.E-19, 1.88267370443418 E-14]]
273
274
  [[2.02988321281931, -2.02988321281931]]
274
275
 
@@ -59,7 +59,7 @@ The list type described in the previous example works recursively. Recall that a
59
59
  >>> sol.volume_numerical()
60
60
  [0.E-19, 1.88267370443418 E-14]
61
61
 
62
- We can chain these commands together to retrieve the volumes of all boundary-unpotent PSL(2, **C**) (that are :ref:`generically decorated <ptolemy-generically-decorated>` with respect to the triangulation) in just one line::
62
+ We can chain these commands together to retrieve the volumes of all boundary-unipotent PSL(2, **C**) (that are :ref:`generically decorated <ptolemy-generically-decorated>` with respect to the triangulation) in just one line::
63
63
 
64
64
  >>> Manifold("m003").ptolemy_variety(2,'all').retrieve_solutions(verbose=False).volume_numerical()
65
65
  [[[0.E-19, 1.88267370443418 E-14]], [[2.02988321281931, -2.02988321281931]]]
@@ -98,12 +98,12 @@ Note that one of the Ptolemy varieties is non-empty which proves that all edges
98
98
  Flattening nested structures
99
99
  ----------------------------
100
100
 
101
- If we want to loose some of the groupping, we can call ``flatten`` on the results. Here the grouping by obstruction class is lost::
101
+ If we want to loose some of the grouping, we can call ``flatten`` on the results. Here the grouping by obstruction class is lost::
102
102
 
103
103
  >>> Manifold("m003").ptolemy_variety(2,'all').retrieve_solutions(verbose=False).volume_numerical().flatten()
104
104
  [[0.E-19, 1.88267370443418 E-14], [2.02988321281931, -2.02988321281931]]
105
105
 
106
- And now, the groupping by Galois conjugacy is lost as well, resulting in a flat list::
106
+ And now, the grouping by Galois conjugacy is lost as well, resulting in a flat list::
107
107
 
108
108
  >>> Manifold("m003").ptolemy_variety(2,'all').retrieve_solutions(verbose=False).volume_numerical().flatten(2)
109
109
  [0.E-19, 1.88267370443418 E-14, 2.02988321281931, -2.02988321281931]
@@ -101,7 +101,7 @@ And here the same example retrieving solutions from the database::
101
101
  Computing the matrices for a different presentation
102
102
  ---------------------------------------------------
103
103
 
104
- The ``fundamental_group`` method of a SnapPy triangulation can yield different presentations by supplying optional arguments such as ``simplify_presentation`` and ``minimize_number_of_generators``. If we have a word in one of these presentations and want to evaluate its image under the representation, we need to supply the presentation as follows::
104
+ The :py:meth:`~snappy.Triangulation.fundamental_group` method of a SnapPy triangulation can yield different presentations by supplying optional arguments such as ``simplify_presentation`` and ``minimize_number_of_generators``. If we have a word in one of these presentations and want to evaluate its image under the representation, we need to supply the presentation as follows::
105
105
 
106
106
  >>> M=Manifold("m003")
107
107
  >>> sol = M.ptolemy_variety(2).retrieve_solutions()[0]
@@ -119,7 +119,7 @@ Again, we can check that the representation actually assigns the identity to all
119
119
  >>> sol.evaluate_word('AbCbA', G)
120
120
  [[Mod(1, x^2 - x - 1), 0], [0, Mod(1, x^2 - x - 1)]]
121
121
  >>> for relator in G.relators():
122
- ... print sol.evaluate_word(relator, G)
122
+ ... print(sol.evaluate_word(relator, G))
123
123
  [[Mod(1, x^2 - x - 1), 0], [0, Mod(1, x^2 - x - 1)]]
124
124
  [[Mod(1, x^2 - x - 1), 0], [0, Mod(1, x^2 - x - 1)]]
125
125
 
@@ -129,15 +129,15 @@ Again, we can check that the representation actually assigns the identity to all
129
129
  Computing the images of the peripheral curves for a representation
130
130
  ------------------------------------------------------------------
131
131
 
132
- The object returned by ``fundamental_group`` also contains words for the peripheral curves of a manifold. We can compute the corresponding matrices::
132
+ The object returned by :py:meth:`~snappy.Triangulation.fundamental_group` also contains words for the peripheral curves of a manifold. We can compute the corresponding matrices::
133
133
 
134
134
  >>> M = Manifold("m003")
135
135
  >>> G = M.fundamental_group()
136
136
  >>> sol = M.ptolemy_variety(2,1).retrieve_solutions()[0]
137
137
  >>> for i, cusp_curves in enumerate(G.peripheral_curves()):
138
- ... print "Cusp %d:" % i
138
+ ... print("Cusp %d:" % i)
139
139
  ... for cusp_curve in cusp_curves:
140
- ... print sol.evaluate_word(cusp_curve, G)
140
+ ... print(sol.evaluate_word(cusp_curve, G))
141
141
  Cusp 0:
142
142
  [[Mod(2*x - 3, x^2 + x + 1), Mod(2*x, x^2 + x + 1)], [Mod(6, x^2 + x + 1), Mod(-2*x + 1, x^2 + x + 1)]]
143
143
  [[Mod(-2*x - 5, x^2 + x + 1), Mod(-2, x^2 + x + 1)], [Mod(6*x + 6, x^2 + x + 1), Mod(2*x + 3, x^2 + x + 1)]]
@@ -179,10 +179,10 @@ We see that we have one such component and that each component is actually itsel
179
179
  We can access the witness point(s) for each component just by iteration::
180
180
 
181
181
  >>> for component in one_dim_sols:
182
- ... print "Component:"
182
+ ... print("Component:")
183
183
  ... for witness in component:
184
- ... print " Witness:"
185
- ... print " Volumes:", witness.volume_numerical()
184
+ ... print(" Witness:")
185
+ ... print(" Volumes:", witness.volume_numerical())
186
186
  Component:
187
187
  Witness:
188
188
  Volumes: [0.E-38, 0.E-38]
@@ -201,12 +201,12 @@ We now revisit the :ref:`1-dimensional component of the Ptolemy variety<ptolemy-
201
201
  >>> sols = M.ptolemy_variety(2,'all').retrieve_solutions().flatten()
202
202
  >>> components = [ sol for sol in sols if sol.dimension > 0]
203
203
  >>> for component in components:
204
- ... print "Component of dimension %d" % component.dimension
204
+ ... print("Component of dimension %d" % component.dimension)
205
205
  ... for witness in component:
206
206
  ... for i, cusp_curves in enumerate(G.peripheral_curves()):
207
- ... print " Cusp %d:" % i
207
+ ... print(" Cusp %d:" % i)
208
208
  ... for cusp_curve in cusp_curves:
209
- ... print " ", witness.evaluate_word(cusp_curve, G)
209
+ ... print(" ", witness.evaluate_word(cusp_curve, G))
210
210
  Component of dimension 1
211
211
  Cusp 0:
212
212
  [[Mod(1, x^2 + x + 2), 0], [0, Mod(1, x^2 + x + 2)]]
@@ -221,12 +221,12 @@ Let us try another manifold, ``m410``:
221
221
  >>> sols = M.ptolemy_variety(2,'all').retrieve_solutions().flatten()
222
222
  >>> components = [ sol for sol in sols if sol.dimension > 0]
223
223
  >>> for component in components:
224
- ... print "Component of dimension %d" % component.dimension
224
+ ... print("Component of dimension %d" % component.dimension)
225
225
  ... for witness in component:
226
226
  ... for i, cusp_curves in enumerate(G.peripheral_curves()):
227
- ... print " Cusp %d:" % i
227
+ ... print(" Cusp %d:" % i)
228
228
  ... for cusp_curve in cusp_curves:
229
- ... print " ", witness.evaluate_word(cusp_curve, G)
229
+ ... print(" ", witness.evaluate_word(cusp_curve, G))
230
230
  Component of dimension 1
231
231
  Cusp 0:
232
232
  [[Mod(1, x^2 + 2), 0], [0, Mod(1, x^2 + 2)]]
@@ -22,7 +22,7 @@ Boundary-unipotent
22
22
 
23
23
  We call a SL(*N*, **C**)-representation *boundary-unipotent* if each peripheral subgroup is taken to
24
24
  a conjugate of the unipotent group *P* of upper unit-triangular matrices. Similarly, we call
25
- a PSL(*N*, **C**)-representation *boundary-unipotent* if each peripheral subrgroup is taken to a conjugate
25
+ a PSL(*N*, **C**)-representation *boundary-unipotent* if each peripheral subgroup is taken to a conjugate
26
26
  of the unipotent group of PSL(*N*, **C**), i.e., the image of *P* under the projection SL(*N*, **C**)\ :math:`\rightarrow`\ PSL(*N*, **C**).
27
27
 
28
28
  Note that even when boundary-unipotent PSL(*N*, **C**)-representation can be lifted to an
@@ -2,7 +2,7 @@
2
2
  .. automodule:: snappy.snap
3
3
 
4
4
  Number theory of hyperbolic 3-manifolds
5
- =============================================
5
+ =======================================
6
6
 
7
7
  SnapPy has support for arbitrary-precision computation and for
8
8
  identifying number fields associated to hyperbolic 3-manifolds. While
@@ -77,7 +77,7 @@ introspection::
77
77
  sage: M.hyperbolic_torsion?
78
78
  Definition: M.hyperbolic_torsion(M, bits_prec=100, all_lifts=False, wada_conventions=False, phi=None)
79
79
  Docstring:
80
- Computes the hyperbolic torision polynomial as defined in [DFJ].
80
+ Computes the hyperbolic torsion polynomial as defined in [DFJ].
81
81
 
82
82
  >>> M = Manifold('K11n42')
83
83
  >>> M.alexander_polynomial()
@@ -7,7 +7,7 @@ SnapPy is centered around a Python interface for SnapPea called
7
7
  "snappy", and this is what you're interacting with in the main "SnapPy
8
8
  command shell" window. The main class is Manifold, which is an ideal
9
9
  triangulation of the interior of a compact 3-manifold with torus
10
- boundary, where each tetrahedron has has been assigned the geometry of
10
+ boundary, where each tetrahedron has been assigned the geometry of
11
11
  an ideal tetrahedron in hyperbolic 3-space. A Dehn-filling can be
12
12
  specified for each boundary component, allowing the description of
13
13
  closed 3-manifolds and some orbifolds. The class Manifold is derived
@@ -3,8 +3,9 @@
3
3
  Triangulation
4
4
  =================
5
5
 
6
- The main snappy class, namely Manifold, is derived from more
7
- basic class below.
6
+ The main snappy class, namely Manifold, is derived from the more
7
+ basic class below.
8
8
 
9
9
  .. autoclass:: snappy.Triangulation
10
10
  :members:
11
+ :inherited-members: