snappy 3.0.3__cp38-cp38-macosx_11_0_arm64.whl → 3.2__cp38-cp38-macosx_11_0_arm64.whl

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  1. snappy/CyOpenGL.cpython-38-darwin.so +0 -0
  2. snappy/SnapPy.cpython-38-darwin.so +0 -0
  3. snappy/SnapPyHP.cpython-38-darwin.so +0 -0
  4. snappy/__init__.py +373 -426
  5. snappy/app.py +240 -75
  6. snappy/app_menus.py +93 -78
  7. snappy/browser.py +87 -63
  8. snappy/cache.py +5 -8
  9. snappy/canonical.py +249 -0
  10. snappy/{verify/cusp_shapes.py → cusps/__init__.py} +11 -19
  11. snappy/cusps/cusp_area_matrix.py +101 -0
  12. snappy/{verify/cusp_areas.py → cusps/cusp_areas_from_matrix.py} +39 -54
  13. snappy/cusps/maximal_cusp_area_matrix.py +136 -0
  14. snappy/cusps/test.py +21 -0
  15. snappy/cusps/trig_cusp_area_matrix.py +63 -0
  16. snappy/database.py +40 -31
  17. snappy/db_utilities.py +13 -14
  18. snappy/decorated_isosig.py +377 -133
  19. snappy/dev/extended_ptolemy/complexVolumesClosed.py +42 -9
  20. snappy/dev/extended_ptolemy/extended.py +32 -25
  21. snappy/dev/extended_ptolemy/giac_rur.py +23 -8
  22. snappy/dev/extended_ptolemy/phc_wrapper.py +10 -10
  23. snappy/dev/vericlosed/computeApproxHyperbolicStructureOrb.py +2 -1
  24. snappy/dev/vericlosed/gimbalLoopFinder.py +5 -5
  25. snappy/dev/vericlosed/hyperbolicStructure.py +3 -3
  26. snappy/dev/vericlosed/oneVertexTruncatedComplex.py +2 -2
  27. snappy/dev/vericlosed/truncatedComplex.py +3 -2
  28. snappy/dev/vericlosed/verifyHyperbolicStructureEngine.py +4 -3
  29. snappy/doc/_images/geodesics.jpg +0 -0
  30. snappy/doc/_images/m004_paper_plane_on_systole.jpg +0 -0
  31. snappy/doc/_images/m125_paper_plane.jpg +0 -0
  32. snappy/doc/_images/o9_00000_systole_paper_plane.jpg +0 -0
  33. snappy/doc/_images/o9_00000_systole_paper_plane_closer.jpg +0 -0
  34. snappy/doc/_sources/additional_classes.rst.txt +1 -0
  35. snappy/doc/_sources/credits.rst.txt +6 -1
  36. snappy/doc/_sources/development.rst.txt +69 -50
  37. snappy/doc/_sources/index.rst.txt +101 -66
  38. snappy/doc/_sources/installing.rst.txt +148 -165
  39. snappy/doc/_sources/news.rst.txt +136 -32
  40. snappy/doc/_sources/ptolemy.rst.txt +1 -1
  41. snappy/doc/_sources/ptolemy_examples1.rst.txt +9 -8
  42. snappy/doc/_sources/ptolemy_examples2.rst.txt +3 -3
  43. snappy/doc/_sources/ptolemy_examples3.rst.txt +14 -14
  44. snappy/doc/_sources/ptolemy_prelim.rst.txt +1 -1
  45. snappy/doc/_sources/snap.rst.txt +2 -2
  46. snappy/doc/_sources/snappy.rst.txt +1 -1
  47. snappy/doc/_sources/triangulation.rst.txt +3 -2
  48. snappy/doc/_sources/verify.rst.txt +89 -29
  49. snappy/doc/_sources/verify_internals.rst.txt +5 -16
  50. snappy/doc/_static/SnapPy-horizontal-128.png +0 -0
  51. snappy/doc/_static/SnapPy.ico +0 -0
  52. snappy/doc/_static/_sphinx_javascript_frameworks_compat.js +123 -0
  53. snappy/doc/_static/basic.css +47 -27
  54. snappy/doc/_static/css/badge_only.css +1 -0
  55. snappy/doc/_static/css/fonts/Roboto-Slab-Bold.woff +0 -0
  56. snappy/doc/_static/css/fonts/Roboto-Slab-Bold.woff2 +0 -0
  57. snappy/doc/_static/css/fonts/Roboto-Slab-Regular.woff +0 -0
  58. snappy/doc/_static/css/fonts/Roboto-Slab-Regular.woff2 +0 -0
  59. snappy/doc/_static/css/fonts/fontawesome-webfont.eot +0 -0
  60. snappy/doc/_static/css/fonts/fontawesome-webfont.svg +2671 -0
  61. snappy/doc/_static/css/fonts/fontawesome-webfont.ttf +0 -0
  62. snappy/doc/_static/css/fonts/fontawesome-webfont.woff +0 -0
  63. snappy/doc/_static/css/fonts/fontawesome-webfont.woff2 +0 -0
  64. snappy/doc/_static/css/fonts/lato-bold-italic.woff +0 -0
  65. snappy/doc/_static/css/fonts/lato-bold-italic.woff2 +0 -0
  66. snappy/doc/_static/css/fonts/lato-bold.woff +0 -0
  67. snappy/doc/_static/css/fonts/lato-bold.woff2 +0 -0
  68. snappy/doc/_static/css/fonts/lato-normal-italic.woff +0 -0
  69. snappy/doc/_static/css/fonts/lato-normal-italic.woff2 +0 -0
  70. snappy/doc/_static/css/fonts/lato-normal.woff +0 -0
  71. snappy/doc/_static/css/fonts/lato-normal.woff2 +0 -0
  72. snappy/doc/_static/css/theme.css +4 -0
  73. snappy/doc/_static/doctools.js +107 -274
  74. snappy/doc/_static/documentation_options.js +6 -5
  75. snappy/doc/_static/fonts/Lato/lato-bold.eot +0 -0
  76. snappy/doc/_static/fonts/Lato/lato-bold.ttf +0 -0
  77. snappy/doc/_static/fonts/Lato/lato-bold.woff +0 -0
  78. snappy/doc/_static/fonts/Lato/lato-bold.woff2 +0 -0
  79. snappy/doc/_static/fonts/Lato/lato-bolditalic.eot +0 -0
  80. snappy/doc/_static/fonts/Lato/lato-bolditalic.ttf +0 -0
  81. snappy/doc/_static/fonts/Lato/lato-bolditalic.woff +0 -0
  82. snappy/doc/_static/fonts/Lato/lato-bolditalic.woff2 +0 -0
  83. snappy/doc/_static/fonts/Lato/lato-italic.eot +0 -0
  84. snappy/doc/_static/fonts/Lato/lato-italic.ttf +0 -0
  85. snappy/doc/_static/fonts/Lato/lato-italic.woff +0 -0
  86. snappy/doc/_static/fonts/Lato/lato-italic.woff2 +0 -0
  87. snappy/doc/_static/fonts/Lato/lato-regular.eot +0 -0
  88. snappy/doc/_static/fonts/Lato/lato-regular.ttf +0 -0
  89. snappy/doc/_static/fonts/Lato/lato-regular.woff +0 -0
  90. snappy/doc/_static/fonts/Lato/lato-regular.woff2 +0 -0
  91. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.eot +0 -0
  92. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.ttf +0 -0
  93. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.woff +0 -0
  94. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-bold.woff2 +0 -0
  95. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.eot +0 -0
  96. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.ttf +0 -0
  97. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.woff +0 -0
  98. snappy/doc/_static/fonts/RobotoSlab/roboto-slab-v7-regular.woff2 +0 -0
  99. snappy/doc/_static/jquery.js +2 -2
  100. snappy/doc/_static/js/badge_only.js +1 -0
  101. snappy/doc/_static/js/theme.js +1 -0
  102. snappy/doc/_static/js/versions.js +228 -0
  103. snappy/doc/_static/language_data.js +3 -101
  104. snappy/doc/_static/pygments.css +1 -0
  105. snappy/doc/_static/searchtools.js +489 -398
  106. snappy/doc/_static/snappy_furo.css +33 -0
  107. snappy/doc/_static/snappy_sphinx_rtd_theme.css +42 -0
  108. snappy/doc/_static/sphinx_highlight.js +154 -0
  109. snappy/doc/additional_classes.html +688 -263
  110. snappy/doc/bugs.html +107 -94
  111. snappy/doc/censuses.html +155 -127
  112. snappy/doc/credits.html +115 -104
  113. snappy/doc/development.html +184 -146
  114. snappy/doc/genindex.html +287 -204
  115. snappy/doc/index.html +189 -150
  116. snappy/doc/installing.html +259 -266
  117. snappy/doc/manifold.html +1626 -592
  118. snappy/doc/manifoldhp.html +119 -105
  119. snappy/doc/news.html +198 -104
  120. snappy/doc/objects.inv +0 -0
  121. snappy/doc/other.html +117 -105
  122. snappy/doc/platonic_census.html +161 -114
  123. snappy/doc/plink.html +113 -105
  124. snappy/doc/ptolemy.html +131 -108
  125. snappy/doc/ptolemy_classes.html +242 -223
  126. snappy/doc/ptolemy_examples1.html +144 -130
  127. snappy/doc/ptolemy_examples2.html +141 -129
  128. snappy/doc/ptolemy_examples3.html +148 -132
  129. snappy/doc/ptolemy_examples4.html +131 -111
  130. snappy/doc/ptolemy_prelim.html +162 -138
  131. snappy/doc/py-modindex.html +104 -69
  132. snappy/doc/screenshots.html +117 -108
  133. snappy/doc/search.html +115 -84
  134. snappy/doc/searchindex.js +1 -1
  135. snappy/doc/snap.html +109 -96
  136. snappy/doc/snappy.html +134 -97
  137. snappy/doc/spherogram.html +259 -187
  138. snappy/doc/todo.html +107 -94
  139. snappy/doc/triangulation.html +1380 -111
  140. snappy/doc/tutorial.html +107 -94
  141. snappy/doc/verify.html +194 -125
  142. snappy/doc/verify_internals.html +248 -686
  143. snappy/drilling/__init__.py +456 -0
  144. snappy/drilling/barycentric.py +103 -0
  145. snappy/drilling/constants.py +5 -0
  146. snappy/drilling/crush.py +270 -0
  147. snappy/drilling/cusps.py +125 -0
  148. snappy/drilling/debug.py +242 -0
  149. snappy/drilling/epsilons.py +6 -0
  150. snappy/drilling/exceptions.py +55 -0
  151. snappy/drilling/moves.py +620 -0
  152. snappy/drilling/peripheral_curves.py +210 -0
  153. snappy/drilling/perturb.py +188 -0
  154. snappy/drilling/shorten.py +36 -0
  155. snappy/drilling/subdivide.py +274 -0
  156. snappy/drilling/test.py +23 -0
  157. snappy/drilling/test_cases.py +126 -0
  158. snappy/drilling/tracing.py +351 -0
  159. snappy/exceptions.py +23 -3
  160. snappy/export_stl.py +20 -14
  161. snappy/exterior_to_link/__init__.py +2 -0
  162. snappy/exterior_to_link/barycentric_geometry.py +463 -0
  163. snappy/exterior_to_link/exceptions.py +6 -0
  164. snappy/exterior_to_link/geodesic_map.json +14408 -0
  165. snappy/exterior_to_link/hyp_utils.py +112 -0
  166. snappy/exterior_to_link/link_projection.py +323 -0
  167. snappy/exterior_to_link/main.py +197 -0
  168. snappy/exterior_to_link/mcomplex_with_expansion.py +261 -0
  169. snappy/exterior_to_link/mcomplex_with_link.py +687 -0
  170. snappy/exterior_to_link/mcomplex_with_memory.py +162 -0
  171. snappy/exterior_to_link/pl_utils.py +491 -0
  172. snappy/exterior_to_link/put_in_S3.py +156 -0
  173. snappy/exterior_to_link/rational_linear_algebra.py +123 -0
  174. snappy/exterior_to_link/rational_linear_algebra_wrapped.py +135 -0
  175. snappy/exterior_to_link/simplify_to_base_tri.py +114 -0
  176. snappy/exterior_to_link/stored_moves.py +475 -0
  177. snappy/exterior_to_link/test.py +31 -0
  178. snappy/geometric_structure/__init__.py +212 -0
  179. snappy/geometric_structure/cusp_neighborhood/__init__.py +3 -0
  180. snappy/geometric_structure/cusp_neighborhood/complex_cusp_cross_section.py +697 -0
  181. snappy/geometric_structure/cusp_neighborhood/cusp_cross_section_base.py +484 -0
  182. snappy/geometric_structure/cusp_neighborhood/exceptions.py +42 -0
  183. snappy/geometric_structure/cusp_neighborhood/real_cusp_cross_section.py +298 -0
  184. snappy/geometric_structure/cusp_neighborhood/tiles_for_cusp_neighborhood.py +159 -0
  185. snappy/geometric_structure/cusp_neighborhood/vertices.py +32 -0
  186. snappy/geometric_structure/geodesic/__init__.py +0 -0
  187. snappy/geometric_structure/geodesic/add_core_curves.py +152 -0
  188. snappy/geometric_structure/geodesic/avoid_core_curves.py +369 -0
  189. snappy/geometric_structure/geodesic/canonical_keys.py +52 -0
  190. snappy/geometric_structure/geodesic/check_away_from_core_curve.py +60 -0
  191. snappy/geometric_structure/geodesic/constants.py +6 -0
  192. snappy/geometric_structure/geodesic/exceptions.py +22 -0
  193. snappy/geometric_structure/geodesic/fixed_points.py +93 -0
  194. snappy/geometric_structure/geodesic/geodesic_start_point_info.py +435 -0
  195. snappy/geometric_structure/geodesic/graph_trace_helper.py +67 -0
  196. snappy/geometric_structure/geodesic/line.py +30 -0
  197. snappy/geometric_structure/geodesic/multiplicity.py +127 -0
  198. snappy/geometric_structure/geodesic/tiles_for_geodesic.py +101 -0
  199. snappy/geometric_structure/test.py +22 -0
  200. snappy/gui.py +36 -36
  201. snappy/horoviewer.py +50 -48
  202. snappy/hyperboloid/__init__.py +212 -0
  203. snappy/hyperboloid/distances.py +245 -0
  204. snappy/hyperboloid/horoball.py +19 -0
  205. snappy/hyperboloid/line.py +35 -0
  206. snappy/hyperboloid/point.py +9 -0
  207. snappy/hyperboloid/triangle.py +29 -0
  208. snappy/{infodialog.py → infowindow.py} +32 -33
  209. snappy/isometry_signature.py +382 -0
  210. snappy/len_spec/__init__.py +596 -0
  211. snappy/len_spec/geodesic_info.py +110 -0
  212. snappy/len_spec/geodesic_key_info_dict.py +117 -0
  213. snappy/len_spec/geodesic_piece.py +143 -0
  214. snappy/len_spec/geometric_structure.py +182 -0
  215. snappy/len_spec/geometry.py +80 -0
  216. snappy/len_spec/length_spectrum_geodesic_info.py +170 -0
  217. snappy/len_spec/spine.py +206 -0
  218. snappy/len_spec/test.py +24 -0
  219. snappy/len_spec/test_cases.py +69 -0
  220. snappy/len_spec/tile.py +275 -0
  221. snappy/len_spec/word.py +86 -0
  222. snappy/manifolds/__init__.py +1 -1
  223. snappy/math_basics.py +176 -0
  224. snappy/matrix.py +525 -0
  225. snappy/number.py +97 -21
  226. snappy/numeric_output_checker.py +37 -27
  227. snappy/pari.py +30 -69
  228. snappy/phone_home.py +25 -20
  229. snappy/polyviewer.py +39 -37
  230. snappy/ptolemy/__init__.py +4 -6
  231. snappy/ptolemy/component.py +14 -12
  232. snappy/ptolemy/coordinates.py +312 -295
  233. snappy/ptolemy/fieldExtensions.py +14 -12
  234. snappy/ptolemy/findLoops.py +43 -31
  235. snappy/ptolemy/geometricRep.py +24 -26
  236. snappy/ptolemy/homology.py +12 -7
  237. snappy/ptolemy/manifoldMethods.py +69 -70
  238. snappy/ptolemy/matrix.py +65 -26
  239. snappy/ptolemy/numericalSolutionsToGroebnerBasis.py +18 -14
  240. snappy/ptolemy/polynomial.py +125 -119
  241. snappy/ptolemy/processComponents.py +36 -30
  242. snappy/ptolemy/processFileBase.py +79 -18
  243. snappy/ptolemy/processFileDispatch.py +13 -14
  244. snappy/ptolemy/processMagmaFile.py +44 -39
  245. snappy/ptolemy/processRurFile.py +18 -11
  246. snappy/ptolemy/ptolemyGeneralizedObstructionClass.py +20 -17
  247. snappy/ptolemy/ptolemyObstructionClass.py +13 -17
  248. snappy/ptolemy/ptolemyVariety.py +190 -121
  249. snappy/ptolemy/ptolemyVarietyPrimeIdealGroebnerBasis.py +20 -19
  250. snappy/ptolemy/reginaWrapper.py +25 -29
  251. snappy/ptolemy/rur.py +6 -14
  252. snappy/ptolemy/solutionsToPrimeIdealGroebnerBasis.py +27 -22
  253. snappy/ptolemy/test.py +247 -188
  254. snappy/ptolemy/utilities.py +41 -43
  255. snappy/raytracing/__init__.py +64 -0
  256. snappy/raytracing/additional_horospheres.py +64 -0
  257. snappy/raytracing/additional_len_spec_choices.py +63 -0
  258. snappy/raytracing/cohomology_fractal.py +10 -6
  259. snappy/raytracing/eyeball.py +123 -0
  260. snappy/raytracing/finite_raytracing_data.py +48 -38
  261. snappy/raytracing/finite_viewer.py +218 -210
  262. snappy/raytracing/geodesic_tube_info.py +174 -0
  263. snappy/raytracing/geodesics.py +246 -0
  264. snappy/raytracing/geodesics_window.py +258 -0
  265. snappy/raytracing/gui_utilities.py +152 -40
  266. snappy/raytracing/hyperboloid_navigation.py +102 -52
  267. snappy/raytracing/hyperboloid_utilities.py +114 -261
  268. snappy/raytracing/ideal_raytracing_data.py +256 -179
  269. snappy/raytracing/inside_viewer.py +522 -253
  270. snappy/raytracing/pack.py +22 -0
  271. snappy/raytracing/raytracing_data.py +46 -34
  272. snappy/raytracing/raytracing_view.py +190 -109
  273. snappy/raytracing/shaders/Eye.png +0 -0
  274. snappy/raytracing/shaders/NonGeometric.png +0 -0
  275. snappy/raytracing/shaders/__init__.py +60 -4
  276. snappy/raytracing/shaders/fragment.glsl +575 -148
  277. snappy/raytracing/test.py +29 -0
  278. snappy/raytracing/tooltip.py +146 -0
  279. snappy/raytracing/upper_halfspace_utilities.py +98 -0
  280. snappy/raytracing/view_scale_controller.py +98 -0
  281. snappy/raytracing/zoom_slider/__init__.py +32 -29
  282. snappy/raytracing/zoom_slider/test.py +2 -0
  283. snappy/sage_helper.py +69 -123
  284. snappy/{preferences.py → settings.py} +167 -145
  285. snappy/shell.py +4 -0
  286. snappy/snap/__init__.py +12 -8
  287. snappy/snap/character_varieties.py +24 -18
  288. snappy/snap/find_field.py +35 -34
  289. snappy/snap/fundamental_polyhedron.py +99 -85
  290. snappy/snap/generators.py +6 -8
  291. snappy/snap/interval_reps.py +18 -6
  292. snappy/snap/kernel_structures.py +8 -3
  293. snappy/snap/mcomplex_base.py +1 -2
  294. snappy/snap/nsagetools.py +107 -53
  295. snappy/snap/peripheral/__init__.py +1 -1
  296. snappy/snap/peripheral/dual_cellulation.py +15 -7
  297. snappy/snap/peripheral/link.py +20 -16
  298. snappy/snap/peripheral/peripheral.py +22 -14
  299. snappy/snap/peripheral/surface.py +47 -50
  300. snappy/snap/peripheral/test.py +8 -8
  301. snappy/snap/polished_reps.py +65 -40
  302. snappy/snap/shapes.py +41 -22
  303. snappy/snap/slice_obs_HKL.py +64 -25
  304. snappy/snap/t3mlite/arrow.py +88 -51
  305. snappy/snap/t3mlite/corner.py +5 -6
  306. snappy/snap/t3mlite/edge.py +32 -21
  307. snappy/snap/t3mlite/face.py +7 -9
  308. snappy/snap/t3mlite/files.py +31 -23
  309. snappy/snap/t3mlite/homology.py +14 -10
  310. snappy/snap/t3mlite/linalg.py +158 -56
  311. snappy/snap/t3mlite/mcomplex.py +739 -291
  312. snappy/snap/t3mlite/perm4.py +236 -84
  313. snappy/snap/t3mlite/setup.py +9 -10
  314. snappy/snap/t3mlite/simplex.py +65 -48
  315. snappy/snap/t3mlite/spun.py +42 -30
  316. snappy/snap/t3mlite/surface.py +45 -45
  317. snappy/snap/t3mlite/test.py +3 -0
  318. snappy/snap/t3mlite/test_vs_regina.py +17 -13
  319. snappy/snap/t3mlite/tetrahedron.py +25 -24
  320. snappy/snap/t3mlite/vertex.py +8 -13
  321. snappy/snap/test.py +45 -52
  322. snappy/snap/utilities.py +66 -65
  323. snappy/test.py +155 -158
  324. snappy/test_cases.py +263 -0
  325. snappy/testing.py +131 -0
  326. snappy/tiling/__init__.py +2 -0
  327. snappy/tiling/canonical_key_dict.py +59 -0
  328. snappy/tiling/dict_based_set.py +79 -0
  329. snappy/tiling/floor.py +49 -0
  330. snappy/tiling/hyperboloid_dict.py +54 -0
  331. snappy/tiling/iter_utils.py +78 -0
  332. snappy/tiling/lifted_tetrahedron.py +22 -0
  333. snappy/tiling/lifted_tetrahedron_set.py +54 -0
  334. snappy/tiling/real_hash_dict.py +164 -0
  335. snappy/tiling/test.py +23 -0
  336. snappy/tiling/tile.py +215 -0
  337. snappy/tiling/triangle.py +33 -0
  338. snappy/tkterminal.py +313 -203
  339. snappy/twister/main.py +1 -8
  340. snappy/twister/twister_core.cpython-38-darwin.so +0 -0
  341. snappy/upper_halfspace/__init__.py +146 -0
  342. snappy/upper_halfspace/ideal_point.py +26 -0
  343. snappy/verify/__init__.py +4 -8
  344. snappy/verify/{verifyCanonical.py → canonical.py} +114 -97
  345. snappy/verify/complex_volume/__init__.py +3 -2
  346. snappy/verify/complex_volume/adjust_torsion.py +13 -11
  347. snappy/verify/complex_volume/closed.py +29 -24
  348. snappy/verify/complex_volume/compute_ptolemys.py +8 -6
  349. snappy/verify/complex_volume/cusped.py +10 -9
  350. snappy/verify/complex_volume/extended_bloch.py +14 -12
  351. snappy/verify/{cuspTranslations.py → cusp_translations.py} +15 -14
  352. snappy/verify/edge_equations.py +80 -0
  353. snappy/verify/exceptions.py +23 -56
  354. snappy/verify/{verifyHyperbolicity.py → hyperbolicity.py} +19 -15
  355. snappy/verify/interval_newton_shapes_engine.py +51 -211
  356. snappy/verify/interval_tree.py +27 -25
  357. snappy/verify/krawczyk_shapes_engine.py +47 -50
  358. snappy/verify/maximal_cusp_area_matrix/__init__.py +17 -86
  359. snappy/verify/maximal_cusp_area_matrix/cusp_tiling_engine.py +58 -48
  360. snappy/verify/maximal_cusp_area_matrix/cusp_translate_engine.py +53 -57
  361. snappy/verify/{realAlgebra.py → real_algebra.py} +26 -20
  362. snappy/verify/shapes.py +10 -7
  363. snappy/verify/short_slopes.py +41 -42
  364. snappy/verify/{squareExtensions.py → square_extensions.py} +96 -92
  365. snappy/verify/test.py +59 -57
  366. snappy/verify/upper_halfspace/extended_matrix.py +5 -5
  367. snappy/verify/upper_halfspace/finite_point.py +44 -31
  368. snappy/verify/upper_halfspace/ideal_point.py +69 -57
  369. snappy/verify/volume.py +15 -12
  370. snappy/version.py +2 -3
  371. {snappy-3.0.3.dist-info → snappy-3.2.dist-info}/METADATA +14 -12
  372. snappy-3.2.dist-info/RECORD +503 -0
  373. {snappy-3.0.3.dist-info → snappy-3.2.dist-info}/WHEEL +1 -1
  374. {snappy-3.0.3.dist-info → snappy-3.2.dist-info}/entry_points.txt +0 -1
  375. {snappy-3.0.3.dist-info → snappy-3.2.dist-info}/top_level.txt +10 -1
  376. snappy/doc/_sources/verify_canon.rst.txt +0 -90
  377. snappy/doc/_static/classic.css +0 -266
  378. snappy/doc/_static/jquery-3.5.1.js +0 -10872
  379. snappy/doc/_static/sidebar.js +0 -159
  380. snappy/doc/_static/underscore-1.13.1.js +0 -2042
  381. snappy/doc/_static/underscore.js +0 -6
  382. snappy/doc/verify_canon.html +0 -283
  383. snappy/ppm_to_png.py +0 -243
  384. snappy/togl/__init__.py +0 -3
  385. snappy/togl/darwin-tk8.6/Togl2.1/LICENSE +0 -28
  386. snappy/togl/darwin-tk8.6/Togl2.1/libTogl2.1.dylib +0 -0
  387. snappy/togl/darwin-tk8.6/Togl2.1/pkgIndex.tcl +0 -5
  388. snappy/togl/linux2-x86_64-tk8.6/Togl2.1/LICENSE +0 -28
  389. snappy/togl/linux2-x86_64-tk8.6/Togl2.1/libTogl2.1.so +0 -0
  390. snappy/togl/linux2-x86_64-tk8.6/Togl2.1/pkgIndex.tcl +0 -5
  391. snappy/togl/win32VC-tk8.6/Togl2.1/LICENSE +0 -28
  392. snappy/togl/win32VC-tk8.6/Togl2.1/Togl21.dll +0 -0
  393. snappy/togl/win32VC-tk8.6/Togl2.1/Togl21.lib +0 -0
  394. snappy/togl/win32VC-tk8.6/Togl2.1/pkgIndex.tcl +0 -6
  395. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/LICENSE +0 -28
  396. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/Togl21.dll +0 -0
  397. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/Togl21.lib +0 -0
  398. snappy/togl/win32VC-x86_64-tk8.6/Togl2.1/pkgIndex.tcl +0 -6
  399. snappy/verify/cuspCrossSection.py +0 -1413
  400. snappy/verify/mathHelpers.py +0 -64
  401. snappy-3.0.3.dist-info/RECORD +0 -360
@@ -3,7 +3,8 @@ from .. import t3mlite as t3m
3
3
  from . import link, dual_cellulation
4
4
 
5
5
  if sage_helper._within_sage:
6
- from sage.all import matrix, vector, ZZ
6
+ from ...sage_helper import matrix, vector, ZZ
7
+
7
8
 
8
9
  def peripheral_curve_from_snappy(dual_cell, snappy_data):
9
10
  D = dual_cell
@@ -67,7 +68,7 @@ def peripheral_curve_package(snappy_manifold):
67
68
  A = matrix([[alpha(meridian), beta(meridian)], [alpha(longitude), beta(longitude)]])
68
69
  assert abs(A.det()) == 1
69
70
  Ainv = A.inverse().change_ring(ZZ)
70
- B = Ainv.transpose()*matrix(ZZ, [alpha.weights, beta.weights])
71
+ B = Ainv.transpose() * matrix(ZZ, [alpha.weights, beta.weights])
71
72
  mstar = dual_cellulation.OneCocycle(D, list(B[0]))
72
73
  lstar = dual_cellulation.OneCocycle(D, list(B[1]))
73
74
  AA = matrix([[mstar(meridian), lstar(meridian)], [mstar(longitude), lstar(longitude)]])
@@ -78,13 +79,14 @@ def peripheral_curve_package(snappy_manifold):
78
79
  N.cusp_dual_cellulation = D
79
80
  D.meridian, D.longitude = meridian, longitude
80
81
  D.meridian_star, D.longitude_star = mstar, lstar
82
+
81
83
  def slope(onecycle):
82
84
  return vector([D.meridian_star(onecycle), D.longitude_star(onecycle)])
83
85
  D.slope = slope
84
86
  return N, C, D, (mstar, lstar)
85
87
 
86
88
 
87
- class PeripheralOneCocycle(object):
89
+ class PeripheralOneCocycle():
88
90
  """
89
91
  Let M be an ideal triangulation with one cusp, and consider the
90
92
  induced triangulation T of the cusp torus. This object is a
@@ -103,7 +105,7 @@ class PeripheralOneCocycle(object):
103
105
  tet = self.mcomplex.Tetrahedra[tet_num]
104
106
  triangle = tet.CuspCorners[V]
105
107
  for side in triangle.oriented_sides():
106
- E0, E1 = [link.TruncatedSimplexCorners[V][v] for v in side.vertices]
108
+ E0, E1 = (link.TruncatedSimplexCorners[V][v] for v in side.vertices)
107
109
  if E0 | E1 == F:
108
110
  break
109
111
  assert E0 | E1 == F
@@ -116,23 +118,27 @@ class PeripheralOneCocycle(object):
116
118
 
117
119
  def peripheral_cohomology_basis(manifold):
118
120
  """
119
- sage: M = Manifold('v0000')
120
- sage: m, l = peripheral_cohomology_basis(M)
121
- sage: face_corners = [(t, f, v) for t in range(7) for f in t3m.TwoSubsimplices for v in t3m.ZeroSubsimplices if f & v ]
122
- sage: [m[fc] for fc in face_corners] # doctest: +SKIP
123
- [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
124
- 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
125
- 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0,
126
- 0, 0, -1, 0, -1, -1, 0, -1, 0, 0, -1, 0, 1, 0, 1, 0, 1, 0]
121
+ TESTS::
122
+
123
+ sage: M = Manifold('v0000')
124
+ sage: m, l = peripheral_cohomology_basis(M)
125
+ sage: face_corners = [(t, f, v) for t in range(7) for f in t3m.TwoSubsimplices for v in t3m.ZeroSubsimplices if f & v ]
126
+ sage: [m[fc] for fc in face_corners] # doctest: +SKIP
127
+ [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
128
+ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0,
129
+ 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0,
130
+ 0, 0, -1, 0, -1, -1, 0, -1, 0, 0, -1, 0, 1, 0, 1, 0, 1, 0]
127
131
  """
128
-
129
132
  assert manifold.is_orientable() and manifold.num_cusps() == 1
130
133
  N, T, D, (m, l) = peripheral_curve_package(manifold)
131
134
  return PeripheralOneCocycle(m), PeripheralOneCocycle(l)
132
135
 
136
+
133
137
  def test_peripheral_curves(n=100, progress=True):
134
138
  """
135
- sage: test_peripheral_curves(5, False)
139
+ TESTS::
140
+
141
+ sage: test_peripheral_curves(5, False)
136
142
  """
137
143
  import snappy
138
144
  census = snappy.OrientableCuspedCensus(cusps=1)
@@ -142,10 +148,12 @@ def test_peripheral_curves(n=100, progress=True):
142
148
  print(M.name())
143
149
  peripheral_curve_package(M)
144
150
 
151
+
145
152
  def doctest_globals():
146
153
  import snappy
147
154
  return {'Manifold':snappy.Manifold}
148
155
 
156
+
149
157
  if __name__ == '__main__':
150
158
  import doctest
151
159
  doctest.testmod(extraglobs=doctest_globals())
@@ -2,14 +2,14 @@ from collections import OrderedDict
2
2
  from ... import sage_helper
3
3
 
4
4
  if sage_helper._within_sage:
5
- from sage.all import (ZZ, matrix, vector, ChainComplex,
6
- cached_method, line, arrow, text)
5
+ from ...sage_helper import ZZ, matrix, vector, cached_method, ChainComplex
6
+ from sage.plot.all import line, arrow, text
7
7
  else:
8
8
  def cached_method(func):
9
9
  return func
10
10
 
11
11
 
12
- class Triangle(object):
12
+ class Triangle():
13
13
  """
14
14
  The vertices are numbered 0, 1, 2 in an anti-clockwise
15
15
  orientation.
@@ -28,27 +28,29 @@ class Triangle(object):
28
28
  def oriented_sides(self):
29
29
  return [Side(self, e) for e in oriented_edges_of_triangle]
30
30
 
31
+
31
32
  def opposite_vertex_from_edge_function( vertices ):
32
- other = [v for v in range(3) if not v in vertices]
33
+ other = [v for v in range(3) if v not in vertices]
33
34
  assert len(vertices) == 2 and len(other) == 1
34
35
  return other[0]
35
36
 
37
+
36
38
  opposite_vertex_from_edge_dict = {(i,j):opposite_vertex_from_edge_function((i,j))
37
39
  for i in range(3) for j in range(3) if i != j}
38
40
 
39
41
  oriented_edges_of_triangle = [ (1,2), (2,0), (0, 1)]
40
42
 
41
43
 
42
- class Edge(object):
44
+ class Edge():
43
45
  """
44
46
  An oriented edge 0 -> 1.
45
47
  """
46
- def __init__(self, sides = None, vertices=None):
47
- self.sides, self.vertices= sides, vertices
48
+ def __init__(self, sides=None, vertices=None):
49
+ self.sides, self.vertices = sides, vertices
48
50
  self.index = None
49
51
 
50
52
  def glued_to(self, side):
51
- for sides in ( [S for S in self.sides], [-S for S in self.sides] ):
53
+ for sides in ( list(self.sides), [-S for S in self.sides] ):
52
54
  if side in sides:
53
55
  sides.remove(side)
54
56
  return sides[0]
@@ -73,14 +75,15 @@ class Edge(object):
73
75
  self.vertices = (self.vertices[1], self.vertices[0])
74
76
  self.sides = tuple( [-s for s in self.sides] )
75
77
 
76
- class EdgeList(object):
78
+
79
+ class EdgeList():
77
80
  """
78
81
  A list with one item for each edge in a Triangle. The contents
79
82
  can be accessed either by a pair of vertices or by the opposite
80
83
  vertex.
81
84
  """
82
85
  def __init__(self, items):
83
- self.data = dict()
86
+ self.data = {}
84
87
  for i, x in enumerate(items):
85
88
  self[i] = x
86
89
 
@@ -97,8 +100,9 @@ class EdgeList(object):
97
100
  def __repr__(self):
98
101
  return '[%s, %s, %s]' % (self.data[0], self.data[1], self.data[2])
99
102
 
100
- class Vertex(object):
101
- def __init__(self, corners = None):
103
+
104
+ class Vertex():
105
+ def __init__(self, corners=None):
102
106
  self.corners = corners
103
107
  self.index = None
104
108
  self.incoming, self.outgoing = [], []
@@ -106,11 +110,12 @@ class Vertex(object):
106
110
  def __repr__(self):
107
111
  return "<Vertex %s: %s %s : %s>" % (self.index, [e.index for e in self.incoming], [e.index for e in self.outgoing], self.corners)
108
112
 
109
- class Side(object):
113
+
114
+ class Side():
110
115
  """
111
116
  A neighborhood of an oriented edge in a triangle
112
117
  """
113
- def __init__(self, triangle = None, vertices = None):
118
+ def __init__(self, triangle=None, vertices=None):
114
119
  self.triangle, self.vertices = triangle, vertices
115
120
  self.index = None
116
121
 
@@ -128,7 +133,7 @@ class Side(object):
128
133
  t, T = self.triangle, other.triangle
129
134
  v, w = self.vertices
130
135
  V, W = other.vertices
131
- return t==T and v==V and w==W
136
+ return t == T and v == V and w == W
132
137
 
133
138
  def __ne__(self, other):
134
139
  return not self.__eq__(other)
@@ -144,7 +149,8 @@ class Side(object):
144
149
  def opposite_vertex(self):
145
150
  return opposite_vertex_from_edge_dict[self.vertices]
146
151
 
147
- class Corner(object):
152
+
153
+ class Corner():
148
154
  """
149
155
  A neighborhood of a vertex V in a triangle T.
150
156
  """
@@ -171,12 +177,13 @@ class Corner(object):
171
177
 
172
178
  def __eq__(self, other):
173
179
  if isinstance(other, Corner):
174
- return (self.triangle==other.triangle) and (self.vertex==other.vertex)
180
+ return (self.triangle == other.triangle) and (self.vertex == other.vertex)
175
181
 
176
182
  def __ne__(self, other):
177
183
  return not self.__eq__(other)
178
184
 
179
- class Surface(object):
185
+
186
+ class Surface():
180
187
  """
181
188
  An oriented surface.
182
189
  """
@@ -199,7 +206,7 @@ class Surface(object):
199
206
  e1 = (b, a)
200
207
 
201
208
  S0, S1 = Side(T0, e0), Side(T1, e1)
202
- E = Edge( sides = (S0,S1) )
209
+ E = Edge( sides=(S0,S1) )
203
210
 
204
211
  T0.edges[opposite_vertex_from_edge_dict[e0]] = E
205
212
  T1.edges[opposite_vertex_from_edge_dict[e1]] = E
@@ -230,7 +237,7 @@ class Surface(object):
230
237
  vertices.append(V)
231
238
 
232
239
  self.vertices = vertices
233
- self._vertex_containing_corner = dict([( (C.triangle, C.vertex), V) for V in vertices for C in V.corners])
240
+ self._vertex_containing_corner = {(C.triangle, C.vertex): V for V in vertices for C in V.corners}
234
241
 
235
242
  def build(self):
236
243
  """
@@ -270,7 +277,7 @@ class Surface(object):
270
277
  for e in self.edges:
271
278
  v_init = vertex_to_row[e.vertices[0]]
272
279
  v_term = vertex_to_row[e.vertices[1]]
273
- D[v_term, e.index]+= 1
280
+ D[v_term, e.index] += 1
274
281
  D[v_init, e.index] += -1
275
282
 
276
283
  return D
@@ -307,25 +314,23 @@ class Surface(object):
307
314
  return self.B2().transpose()
308
315
 
309
316
  def euler(self):
310
- return len(self.vertices) - len(self.edges) + len(self.triangles)
317
+ return len(self.vertices) - len(self.edges) + len(self.triangles)
311
318
 
312
319
  def homology_test(self):
313
320
  B1, B2 = self.B1(), self.B2()
314
- assert B1*B2 == 0
315
- r1, r2 = B1.rank(), B2.rank()
316
- b0 = len(self.vertices) - r1
321
+ assert B1 * B2 == 0
322
+ b0 = len(self.vertices) - B1.rank()
317
323
  b1 = B1.right_kernel().dimension() - B2.rank()
318
324
  b2 = B2.right_kernel().dimension()
319
325
  assert b0 - b1 + b2 == self.euler()
320
326
 
321
-
322
327
  @cached_method
323
328
  def chain_complex(self):
324
- return ChainComplex( {1:self.B1(), 2:self.B2()} , degree=-1 )
329
+ return ChainComplex({1: self.B1(), 2: self.B2()}, degree=-1)
325
330
 
326
331
  @cached_method
327
332
  def cochain_complex(self):
328
- return self.chain_complex().dual()
333
+ return self.chain_complex().dual()
329
334
 
330
335
  @cached_method
331
336
  def betti(self, dimension=1):
@@ -334,16 +339,10 @@ class Surface(object):
334
339
 
335
340
  @cached_method
336
341
  def integral_cohomology_basis(self, dimension=1):
342
+ # Removed use of Chomp per https://trac.sagemath.org/ticket/33777
337
343
  C = self.cochain_complex()
338
- from sage.interfaces.chomp import have_chomp
339
- if have_chomp():
340
- if C.betti(1) != 0:
341
- ans = C.homology(generators=True)[1][1]
342
- else:
343
- ans = []
344
- else:
345
- homology = C.homology(generators=True, algorithm='no_chomp')[dimension]
346
- ans = [factor[1].vector(dimension) for factor in homology]
344
+ homology = C.homology(generators=True)[dimension]
345
+ ans = [factor[1].vector(dimension) for factor in homology]
347
346
 
348
347
  if dimension == 1:
349
348
  assert len(ans) == 2 - self.euler()
@@ -352,16 +351,10 @@ class Surface(object):
352
351
 
353
352
  @cached_method
354
353
  def integral_homology_basis(self, dimension=1):
354
+ # Removed use of Chomp per https://trac.sagemath.org/ticket/33777
355
355
  C = self.chain_complex()
356
- from sage.interfaces.chomp import have_chomp
357
- if have_chomp():
358
- if C.betti(1) != 0:
359
- ans = C.homology(generators=True)[1][1]
360
- else:
361
- ans = []
362
- else:
363
- homology = C.homology(generators=True, algorithm='no_chomp')[dimension]
364
- ans = [factor[1].vector(dimension) for factor in homology]
356
+ homology = C.homology(generators=True)[dimension]
357
+ ans = [factor[1].vector(dimension) for factor in homology]
365
358
 
366
359
  if dimension == 1:
367
360
  assert len(ans) == 2 - self.euler()
@@ -375,6 +368,7 @@ def first_pair_differing_in_first_component(L):
375
368
  if a[0] != b[0]:
376
369
  return a, b
377
370
 
371
+
378
372
  def segments_into_components(L):
379
373
  components = []
380
374
  while L:
@@ -391,6 +385,7 @@ def segments_into_components(L):
391
385
 
392
386
  return components
393
387
 
388
+
394
389
  def component_to_cycle(surface, component):
395
390
  w = len(surface.edges)*[0,]
396
391
  for s in component:
@@ -399,7 +394,7 @@ def component_to_cycle(surface, component):
399
394
 
400
395
 
401
396
  class OneCycleSegment:
402
- def __init__(self, edge, orientation_agrees, family_index, next = None, previous = None):
397
+ def __init__(self, edge, orientation_agrees, family_index, next=None, previous=None):
403
398
  self.edge, self.orientation_agrees = edge, orientation_agrees
404
399
  self.next, self.previous = next, previous
405
400
  self.family_index = family_index
@@ -407,6 +402,7 @@ class OneCycleSegment:
407
402
  def __repr__(self):
408
403
  return "<OCSeg: %d %d>" % (self.edge.index, self.family_index)
409
404
 
405
+
410
406
  class Cycle:
411
407
  """
412
408
  Base class of OneCycle and OneCocycle. The get/setitem allows one to
@@ -417,8 +413,8 @@ class Cycle:
417
413
  """
418
414
  def __init__(self, surface, weights=None, check=True):
419
415
  self.surface, self.weights = surface, weights
420
- if weights == None:
421
- self.weights = len(surface.edges)*[None]
416
+ if weights is None:
417
+ self.weights = len(surface.edges) * [None]
422
418
  else:
423
419
  if check:
424
420
  self.check()
@@ -454,6 +450,7 @@ class Cycle:
454
450
  return self.__class__(self.surface, [s + o for s, o in zip(self.weights, other.weights)],
455
451
  check=False)
456
452
 
453
+
457
454
  class OneCycle(Cycle):
458
455
  def check(self):
459
456
  w = vector(self.weights)
@@ -476,7 +473,7 @@ class OneCycle(Cycle):
476
473
  support = [i for i, w in enumerate(W) if w != 0]
477
474
  segments = {}
478
475
  for i in support:
479
- E =S.edges[i]
476
+ E = S.edges[i]
480
477
  w = self.weights[i]
481
478
  o = 1 if w > 0 else -1
482
479
  segments[i] = [OneCycleSegment(E, o, a) for a in range(abs(w))]
@@ -1,9 +1,11 @@
1
- import sys, getopt
1
+ import sys
2
+ import getopt
2
3
  import doctest
3
4
 
4
5
  from . import dual_cellulation, link, peripheral, surface
5
6
  modules = [dual_cellulation, link, peripheral, surface]
6
7
 
8
+
7
9
  def verbose():
8
10
  try:
9
11
  optlist, args = getopt.getopt(sys.argv[1:], 'v', ['verbose'])
@@ -13,23 +15,21 @@ def verbose():
13
15
  verbose = False
14
16
  return verbose
15
17
 
18
+
16
19
  def doctest_globals(module):
17
20
  if hasattr(module, 'doctest_globals'):
18
21
  return module.doctest_globals()
19
- else:
20
- return dict()
22
+ return {}
23
+
21
24
 
22
25
  if __name__ == '__main__':
23
26
  failed, attempted = 0, 0
24
27
  for module in modules:
25
28
  print(module.__name__)
26
29
  result = doctest.testmod(module,
27
- extraglobs= doctest_globals(module),
30
+ extraglobs=doctest_globals(module),
28
31
  verbose=verbose())
29
- print(4*' ' + repr(result))
32
+ print(4 * ' ' + repr(result))
30
33
  failed += result.failed
31
34
  attempted += result.attempted
32
35
  print('\nAll doctests:\n %s failures out of %s tests.' % (failed, attempted))
33
-
34
-
35
-
@@ -1,44 +1,36 @@
1
- from __future__ import print_function
2
-
3
1
  """
4
2
  A Sage module for finding the holonomy representation of a hyperbolic
5
3
  3-manifold to very high precision.
6
4
  """
7
- import os, sys, re, string, tempfile
8
5
  from itertools import product, chain
9
- from functools import reduce
10
6
  from ..sage_helper import _within_sage
7
+ from ..math_basics import prod
11
8
  from ..pari import pari
12
9
 
13
10
  from .fundamental_polyhedron import *
14
11
 
15
12
  if _within_sage:
16
- import sage
17
- from sage.all import RealField, ComplexField, gcd, prod, powerset
18
- from sage.all import MatrixSpace, matrix, vector, ZZ
19
- Object = sage.structure.sage_object.SageObject
13
+ from ..sage_helper import RealField, ComplexField, gcd, prod, powerset
14
+ from ..sage_helper import MatrixSpace, matrix, vector, ZZ
15
+ from ..sage_helper import SageObject as Object
16
+
20
17
  identity = lambda A: MatrixSpace(A.base_ring(), A.nrows())(1)
21
18
  abelian_group_elt = lambda v: vector(ZZ, v)
22
19
  else:
23
20
  Object = object
24
21
  from .utilities import Matrix2x2 as matrix, powerset
25
22
  from ..number import Number
23
+
26
24
  def identity(A):
27
25
  return matrix(A.base_ring(), 1.0, 0.0, 0.0, 1.0)
28
- def prod(L, initial=None):
29
- if initial:
30
- return reduce(lambda x, y : x*y, L, initial)
31
- elif L:
32
- return reduce(lambda x, y : x*y, L)
33
- else:
34
- return 1
35
26
  abelian_group_elt = lambda v: v
36
27
 
37
- #----------------------------------------------------------------
28
+
29
+ # ----------------------------------------------------------------
38
30
  #
39
31
  # Abelianization of the fundamental group
40
32
  #
41
- #----------------------------------------------------------------
33
+ # ----------------------------------------------------------------
42
34
 
43
35
  class MapToFreeAbelianization(Object):
44
36
  """
@@ -46,9 +38,8 @@ class MapToFreeAbelianization(Object):
46
38
  >>> M = snappy.Manifold('m125')
47
39
  >>> G = M.fundamental_group(False, False, False)
48
40
  >>> rho = MapToFreeAbelianization(G)
49
- >>> from __future__ import print_function
50
41
  >>> for g in G.generators(): print( g, rho(g) )
51
- ...
42
+ ...
52
43
  a (3, -1)
53
44
  b (5, -2)
54
45
  c (0, 1)
@@ -78,9 +69,11 @@ class MapToFreeAbelianization(Object):
78
69
 
79
70
  # General code for storing high-precision representations.
80
71
 
72
+
81
73
  def clean_RR(r, error):
82
74
  return 0 if abs(r) < error else r
83
75
 
76
+
84
77
  if _within_sage:
85
78
  def clean_CC(z, error, prec):
86
79
  CC = ComplexField(prec)
@@ -92,30 +85,38 @@ else:
92
85
  clean_z = pari.complex( clean_RR(re.gen, error), clean_RR(im.gen, error) )
93
86
  return Number(clean_z, precision=prec)
94
87
 
88
+
95
89
  def clean_matrix(A, error, prec):
96
90
  return matrix([[clean_CC(A[x], error, prec) for x in ((i,0),(i,1))]
97
91
  for i in (0,1)])
98
92
 
93
+
99
94
  def SL2C_inverse(A):
100
95
  return matrix([[A[1,1], -A[0, 1]], [-A[1, 0], A[0, 0]]])
101
96
 
97
+
102
98
  def matrix_norm(A):
103
99
  return max( [abs(a) for a in A.list()])
104
100
 
101
+
105
102
  def matrix_difference_norm(A, B):
106
- return max([abs(a - b) for a,b in zip(A.list(), B.list())])
103
+ return max([abs(a - b) for a, b in zip(A.list(), B.list())])
104
+
107
105
 
108
106
  def projective_distance(A, B):
109
107
  return min( matrix_norm(A-B), matrix_norm(A+B) )
110
108
 
109
+
111
110
  def compare_matrices(Mats0, Mats1):
112
- return max([projective_distance(A, B) for A,B in zip(Mats0, Mats1)])
111
+ return max([projective_distance(A, B) for A, B in zip(Mats0, Mats1)])
112
+
113
113
 
114
114
  def make_epsilon(A):
115
115
  prec = A.base_ring().precision()
116
116
  RR = RealField(prec)
117
117
  return RR(2)**(RR(-0.6)*prec)
118
118
 
119
+
119
120
  def make_trace_2(A):
120
121
  P = A if A.trace() > 0 else - A
121
122
  if abs(P.trace() - 2) < make_epsilon(A):
@@ -123,13 +124,14 @@ def make_trace_2(A):
123
124
  else:
124
125
  raise ValueError("Matrix of peripheral element doesn't seem to be parabolic")
125
126
 
127
+
126
128
  def parabolic_eigenvector(A):
127
129
  P, CC, epsilon = make_trace_2(A), A.base_ring(), make_epsilon(A)
128
130
  for v in [vector(CC, (1, 0) ), vector(CC, (0, 1))]:
129
131
  if (v - P*v).norm() < epsilon:
130
132
  return v
131
133
 
132
- v = vector( CC , pari(P - 1).matker()._sage_().list() )
134
+ v = vector( CC , pari(P - 1).matker()[0])
133
135
  assert (v - P*v).norm() < epsilon
134
136
  return v
135
137
 
@@ -207,7 +209,7 @@ class MatrixRepresentation(Object):
207
209
  def all_lifts_to_SL2C(self):
208
210
  ans = []
209
211
  self.lift_to_SL2C()
210
- base_gen_images = map(self, self.generators())
212
+ base_gen_images = [self(g) for g in self.generators()]
211
213
  pos_signs = product( *([(1, -1)]*len(base_gen_images)))
212
214
  for signs in pos_signs:
213
215
  beta = MatrixRepresentation(self.generators(), self.relators(), [ s*A for s, A in zip(signs, base_gen_images)])
@@ -228,6 +230,7 @@ class MatrixRepresentation(Object):
228
230
  enough_elts = [ ''.join(sorted(s)) for s in powerset(gens) if len(s) > 0]
229
231
  return [self(w).trace() for w in enough_elts]
230
232
 
233
+
231
234
  class ManifoldGroup(MatrixRepresentation):
232
235
  def __init__(self, gens, relators, peripheral_curves=None, matrices=None):
233
236
  MatrixRepresentation.__init__(self, gens, relators, matrices)
@@ -240,13 +243,22 @@ class ManifoldGroup(MatrixRepresentation):
240
243
  return self(word)
241
244
 
242
245
  def check_representation(self):
243
- relator_matrices = [self.SL2C(R) for R in self.relators()]
244
- return max([projective_distance(A, identity(A)) for A in relator_matrices])
246
+ relator_matrices = (self.SL2C(R) for R in self.relators())
247
+ return max(projective_distance(A, identity(A)) for A in relator_matrices)
245
248
 
246
249
  def cusp_shape(self, cusp_num=0):
247
- M, L = map(self.SL2C, self.peripheral_curves()[cusp_num])
250
+ """
251
+ Get the polished cusp shape for this representation::
252
+
253
+ sage: M = ManifoldHP('m015')
254
+ sage: rho = M.polished_holonomy(bits_prec=100)
255
+ sage: rho.cusp_shape() # doctest: +NUMERIC24
256
+ -0.49024466750661447990098220731 + 2.9794470664789769463726817144*I
257
+
258
+ """
259
+ M, L = (self.SL2C(w) for w in self.peripheral_curves()[cusp_num])
248
260
  C = extend_to_basis(parabolic_eigenvector(M))
249
- M, L = [ make_trace_2( C**(-1)*A*C ) for A in [M, L] ]
261
+ M, L = ( make_trace_2( C**(-1)*A*C ) for A in [M, L] )
250
262
  z = L[0][1]/M[0][1]
251
263
  return z.conjugate()
252
264
 
@@ -264,21 +276,35 @@ class ManifoldGroup(MatrixRepresentation):
264
276
  assert self.is_nonprojective_representation()
265
277
  assert self(meridian).trace() > 0
266
278
 
279
+ def all_lifts_to_SL2C(self):
280
+ ans = []
281
+ self.lift_to_SL2C()
282
+ base_gen_images = [self(g) for g in self.generators()]
283
+ pos_signs = product( *([(1, -1)]*len(base_gen_images)))
284
+ for signs in pos_signs:
285
+ beta = ManifoldGroup(self.generators(), self.relators(),
286
+ self.peripheral_curves(),
287
+ [ s*A for s, A in zip(signs, base_gen_images)])
288
+ if beta.is_nonprojective_representation():
289
+ ans.append(beta)
290
+ return ans
291
+
267
292
  def __repr__(self):
268
- return 'Generators:\n %s\nRelators:\n %s'%(
293
+ return 'Generators:\n %s\nRelators:\n %s' % (
269
294
  ','.join(self.generators()),
270
295
  '\n '.join(self.relators()))
271
296
 
297
+
272
298
  def polished_holonomy(manifold,
273
- bits_prec = 100,
274
- fundamental_group_args = [],
275
- lift_to_SL2 = True,
276
- ignore_solution_type = False,
277
- dec_prec = None,
278
- match_kernel = True):
299
+ bits_prec=100,
300
+ fundamental_group_args=[],
301
+ lift_to_SL2=True,
302
+ ignore_solution_type=False,
303
+ dec_prec=None,
304
+ match_kernel=True):
279
305
  """
280
- Return the fundamental group of M equipt with a high-precision version of the
281
- holonomy representation::
306
+ Return the fundamental group of M equipped with a high-precision version of
307
+ the holonomy representation::
282
308
 
283
309
  sage: M = Manifold('m004')
284
310
  sage: G = M.polished_holonomy()
@@ -297,9 +323,9 @@ def polished_holonomy(manifold,
297
323
  shapes = M.tetrahedra_shapes('rect', bits_prec=bits_prec, dec_prec=dec_prec)
298
324
  G = M.fundamental_group(*fundamental_group_args)
299
325
  f = FundamentalPolyhedronEngine.from_manifold_and_shapes(
300
- M, shapes, normalize_matrices = True, match_kernel = match_kernel)
301
- mats = f.matrices_for_presentation(G, match_kernel = True)
302
- clean_mats = [ clean_matrix(A, error=error, prec=bits_prec) for A in mats ]
326
+ M, shapes, normalize_matrices=True, match_kernel=match_kernel)
327
+ mats = f.matrices_for_presentation(G, match_kernel=True)
328
+ clean_mats = [clean_matrix(A, error=error, prec=bits_prec) for A in mats]
303
329
  PG = ManifoldGroup(G.generators(), G.relators(), G.peripheral_curves(), clean_mats)
304
330
  if lift_to_SL2:
305
331
  PG.lift_to_SL2C()
@@ -307,4 +333,3 @@ def polished_holonomy(manifold,
307
333
  assert PG.is_projective_representation()
308
334
 
309
335
  return PG
310
-