medsci-skills 4.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +50 -0
- package/README.md +602 -0
- package/README_FIRST.md +27 -0
- package/bin/medsci-skills.js +159 -0
- package/installers/install-macos.command +19 -0
- package/installers/install-windows.cmd +26 -0
- package/installers/install-windows.ps1 +17 -0
- package/installers/install.py +218 -0
- package/metadata/skills_catalog.json +452 -0
- package/package.json +48 -0
- package/skills/academic-aio/SKILL.md +408 -0
- package/skills/academic-aio/references/case_studies/kjr_mllm_2025.md +82 -0
- package/skills/academic-aio/references/checklists/AIO_GENERAL.md +354 -0
- package/skills/academic-aio/references/journal_summarybox_templates.yaml +126 -0
- package/skills/academic-aio/references/oac_funding_checklist.yaml +129 -0
- package/skills/academic-aio/references/reporting_guideline_mapping.md +39 -0
- package/skills/academic-aio/references/schema_markup_templates/CodeRepository.jsonld +32 -0
- package/skills/academic-aio/references/schema_markup_templates/Dataset.jsonld +36 -0
- package/skills/academic-aio/references/schema_markup_templates/Person.jsonld +30 -0
- package/skills/academic-aio/references/schema_markup_templates/README.md +43 -0
- package/skills/academic-aio/references/schema_markup_templates/ScholarlyArticle.jsonld +55 -0
- package/skills/academic-aio/scripts/batch_metadata_audit.py +169 -0
- package/skills/academic-aio/scripts/validate_schema.py +118 -0
- package/skills/academic-aio/skill.yml +36 -0
- package/skills/academic-aio/templates/aio_audit_checklist.md.j2 +108 -0
- package/skills/add-journal/SKILL.md +482 -0
- package/skills/add-journal/skill.yml +33 -0
- package/skills/analyze-stats/SKILL.md +598 -0
- package/skills/analyze-stats/references/analysis_guides/missing_data.md +109 -0
- package/skills/analyze-stats/references/analysis_guides/nhis_icd10_mapping.md +247 -0
- package/skills/analyze-stats/references/analysis_guides/propensity_score.md +132 -0
- package/skills/analyze-stats/references/analysis_guides/regression.md +115 -0
- package/skills/analyze-stats/references/analysis_guides/repeated_measures.md +160 -0
- package/skills/analyze-stats/references/analysis_guides/survey_weighted.md +366 -0
- package/skills/analyze-stats/references/analysis_guides/test_selection.md +86 -0
- package/skills/analyze-stats/references/style/figure_style.mplstyle +69 -0
- package/skills/analyze-stats/references/style/theme_publication.R +147 -0
- package/skills/analyze-stats/references/table-standards/journal-profiles/ajr.yaml +51 -0
- package/skills/analyze-stats/references/table-standards/journal-profiles/european_radiology.yaml +55 -0
- package/skills/analyze-stats/references/table-standards/journal-profiles/jama.yaml +66 -0
- package/skills/analyze-stats/references/table-standards/journal-profiles/lancet.yaml +57 -0
- package/skills/analyze-stats/references/table-standards/journal-profiles/nejm.yaml +51 -0
- package/skills/analyze-stats/references/table-standards/journal-profiles/radiology.yaml +66 -0
- package/skills/analyze-stats/references/table-standards/table-standards.md +287 -0
- package/skills/analyze-stats/references/table-standards/table-types/diagnostic_accuracy.md +36 -0
- package/skills/analyze-stats/references/table-standards/table-types/meta_analysis.md +58 -0
- package/skills/analyze-stats/references/table-standards/table-types/model_comparison.md +36 -0
- package/skills/analyze-stats/references/table-standards/table-types/regression_results.md +50 -0
- package/skills/analyze-stats/references/table-standards/table-types/table1_demographics.md +51 -0
- package/skills/analyze-stats/references/table-standards/tool-comparison.md +79 -0
- package/skills/analyze-stats/references/templates/agreement_analysis.py +436 -0
- package/skills/analyze-stats/references/templates/dca_plot.R +237 -0
- package/skills/analyze-stats/references/templates/diagnostic_accuracy.py +401 -0
- package/skills/analyze-stats/references/templates/dta_meta_analysis.R +384 -0
- package/skills/analyze-stats/references/templates/forest_plot.py +412 -0
- package/skills/analyze-stats/references/templates/likert_summary.py +356 -0
- package/skills/analyze-stats/references/templates/meta_analysis.R +365 -0
- package/skills/analyze-stats/references/templates/propensity_score.py +478 -0
- package/skills/analyze-stats/references/templates/regression.py +425 -0
- package/skills/analyze-stats/references/templates/repeated_measures.py +434 -0
- package/skills/analyze-stats/references/templates/sample_size.R +382 -0
- package/skills/analyze-stats/references/templates/survey_weighted_analysis.py +411 -0
- package/skills/analyze-stats/references/templates/survival_analysis.py +325 -0
- package/skills/analyze-stats/references/templates/table1_demographics.py +287 -0
- package/skills/analyze-stats/scripts/check_generated_code.py +335 -0
- package/skills/analyze-stats/skill.yml +38 -0
- package/skills/analyze-stats/tests/fixtures/gen_bad.R +16 -0
- package/skills/analyze-stats/tests/fixtures/gen_bad.py +24 -0
- package/skills/analyze-stats/tests/fixtures/gen_clean.py +21 -0
- package/skills/analyze-stats/tests/test_generated_code.sh +59 -0
- package/skills/analyze-stats/tests/test_survival_template.sh +53 -0
- package/skills/author-strategy/SKILL.md +117 -0
- package/skills/author-strategy/analyze_patterns.py +303 -0
- package/skills/author-strategy/fetch_pubmed.py +374 -0
- package/skills/author-strategy/skill.yml +34 -0
- package/skills/batch-cohort/SKILL.md +223 -0
- package/skills/batch-cohort/references/base_template_knhanes.R +210 -0
- package/skills/batch-cohort/references/batch_template_generator.R +222 -0
- package/skills/batch-cohort/references/variable_coding_registry.md +136 -0
- package/skills/batch-cohort/skill.yml +35 -0
- package/skills/calc-sample-size/SKILL.md +491 -0
- package/skills/calc-sample-size/references/formulas.md +655 -0
- package/skills/calc-sample-size/references/observational_cohort.md +49 -0
- package/skills/calc-sample-size/skill.yml +51 -0
- package/skills/check-reporting/SKILL.md +534 -0
- package/skills/check-reporting/references/LICENSES.md +41 -0
- package/skills/check-reporting/references/checklists/AMSTAR2.md +54 -0
- package/skills/check-reporting/references/checklists/ARRIVE_2.md +234 -0
- package/skills/check-reporting/references/checklists/CARE.md +102 -0
- package/skills/check-reporting/references/checklists/CLAIM_2024.md +128 -0
- package/skills/check-reporting/references/checklists/CLEAR.md +113 -0
- package/skills/check-reporting/references/checklists/CONSORT.md +86 -0
- package/skills/check-reporting/references/checklists/COSMIN_RoB.md +136 -0
- package/skills/check-reporting/references/checklists/GRRAS.md +61 -0
- package/skills/check-reporting/references/checklists/MI_CLEAR_LLM.md +167 -0
- package/skills/check-reporting/references/checklists/MOOSE.md +85 -0
- package/skills/check-reporting/references/checklists/NOS.md +88 -0
- package/skills/check-reporting/references/checklists/PRISMA_2020.md +135 -0
- package/skills/check-reporting/references/checklists/PRISMA_DTA.md +36 -0
- package/skills/check-reporting/references/checklists/PRISMA_P.md +56 -0
- package/skills/check-reporting/references/checklists/PROBAST.md +75 -0
- package/skills/check-reporting/references/checklists/PROBAST_AI.md +130 -0
- package/skills/check-reporting/references/checklists/QUADAS2.md +77 -0
- package/skills/check-reporting/references/checklists/QUADAS_C.md +131 -0
- package/skills/check-reporting/references/checklists/ROBINS_E.md +179 -0
- package/skills/check-reporting/references/checklists/ROBINS_I.md +87 -0
- package/skills/check-reporting/references/checklists/ROBIS.md +114 -0
- package/skills/check-reporting/references/checklists/ROB_ME.md +126 -0
- package/skills/check-reporting/references/checklists/RoB2.md +79 -0
- package/skills/check-reporting/references/checklists/RoB_NMA.md +96 -0
- package/skills/check-reporting/references/checklists/SPIRIT.md +112 -0
- package/skills/check-reporting/references/checklists/SQUIRE_2.md +68 -0
- package/skills/check-reporting/references/checklists/STARD.md +129 -0
- package/skills/check-reporting/references/checklists/STARD_AI.md +211 -0
- package/skills/check-reporting/references/checklists/STROBE.md +80 -0
- package/skills/check-reporting/references/checklists/SWiM.md +33 -0
- package/skills/check-reporting/references/checklists/TRIPOD.md +157 -0
- package/skills/check-reporting/references/checklists/TRIPOD_AI.md +140 -0
- package/skills/check-reporting/references/step4c_registration_timing.md +93 -0
- package/skills/check-reporting/references/step4d_prisma_figure_audit.md +137 -0
- package/skills/check-reporting/scripts/check_checklist_exists.py +183 -0
- package/skills/check-reporting/scripts/check_checklist_version.py +168 -0
- package/skills/check-reporting/scripts/check_framework_naming.py +206 -0
- package/skills/check-reporting/scripts/check_prisma_figure.py +209 -0
- package/skills/check-reporting/scripts/prisma_cascade_check.py +274 -0
- package/skills/check-reporting/skill.yml +41 -0
- package/skills/check-reporting/tests/fixtures/framework_bad.md +8 -0
- package/skills/check-reporting/tests/fixtures/framework_clean.md +7 -0
- package/skills/check-reporting/tests/test_checklist_fail_fast.sh +77 -0
- package/skills/check-reporting/tests/test_checklist_version.sh +72 -0
- package/skills/check-reporting/tests/test_framework_naming.sh +45 -0
- package/skills/check-reporting/tests/test_prisma_cascade.sh +104 -0
- package/skills/clean-data/SKILL.md +180 -0
- package/skills/clean-data/references/cleaning_patterns.md +299 -0
- package/skills/clean-data/references/profiling_template.py +304 -0
- package/skills/clean-data/scripts/check_structural_zero.py +174 -0
- package/skills/clean-data/skill.yml +35 -0
- package/skills/clean-data/tests/fixtures/smoking.csv +8 -0
- package/skills/clean-data/tests/test_structural_zero.sh +49 -0
- package/skills/cross-national/SKILL.md +264 -0
- package/skills/cross-national/skill.yml +37 -0
- package/skills/define-variables/SKILL.md +146 -0
- package/skills/define-variables/references/common_definitions.md +190 -0
- package/skills/define-variables/skill.yml +34 -0
- package/skills/define-variables/templates/variable_operationalization.md +64 -0
- package/skills/deidentify/SKILL.md +203 -0
- package/skills/deidentify/deidentify.py +1224 -0
- package/skills/deidentify/locales/_template.json +45 -0
- package/skills/deidentify/locales/au.json +43 -0
- package/skills/deidentify/locales/ca.json +44 -0
- package/skills/deidentify/locales/cn.json +47 -0
- package/skills/deidentify/locales/de.json +48 -0
- package/skills/deidentify/locales/fr.json +48 -0
- package/skills/deidentify/locales/in.json +48 -0
- package/skills/deidentify/locales/jp.json +48 -0
- package/skills/deidentify/locales/kr.json +48 -0
- package/skills/deidentify/locales/uk.json +45 -0
- package/skills/deidentify/locales/us.json +43 -0
- package/skills/deidentify/references/date_shift_guide.md +82 -0
- package/skills/deidentify/references/hipaa_18_identifiers.md +48 -0
- package/skills/deidentify/references/korean_phi_patterns.md +135 -0
- package/skills/deidentify/skill.yml +43 -0
- package/skills/deidentify/tests/README.md +26 -0
- package/skills/deidentify/tests/test_clean.csv +16 -0
- package/skills/deidentify/tests/test_edge_cases.csv +11 -0
- package/skills/deidentify/tests/test_phi_korean.csv +11 -0
- package/skills/design-ai-benchmarking/SKILL.md +214 -0
- package/skills/design-ai-benchmarking/references/benchmark_export_schema.json +69 -0
- package/skills/design-ai-benchmarking/references/elicitation_rubric_template.md +37 -0
- package/skills/design-ai-benchmarking/skill.yml +38 -0
- package/skills/design-study/SKILL.md +298 -0
- package/skills/design-study/skill.yml +33 -0
- package/skills/fill-icmje-coi/SKILL.md +216 -0
- package/skills/fill-icmje-coi/scripts/fill_icmje_coi.py +140 -0
- package/skills/fill-icmje-coi/skill.yml +35 -0
- package/skills/fill-icmje-coi/templates/icmje_coi_seed_synthetic.docx +0 -0
- package/skills/fill-protocol/SKILL.md +248 -0
- package/skills/fill-protocol/examples/example_irb_template.yaml +53 -0
- package/skills/fill-protocol/references/best_practices.md +121 -0
- package/skills/fill-protocol/scripts/doc_to_docx.py +111 -0
- package/skills/fill-protocol/scripts/fill_form.py +611 -0
- package/skills/fill-protocol/scripts/inspect_template.py +61 -0
- package/skills/fill-protocol/setup.sh +162 -0
- package/skills/fill-protocol/skill.yml +37 -0
- package/skills/find-cohort-gap/SKILL.md +309 -0
- package/skills/find-cohort-gap/references/cohort_profile_template.md +93 -0
- package/skills/find-cohort-gap/references/onepager_template.md +84 -0
- package/skills/find-cohort-gap/references/pattern_scoring_rubric.md +169 -0
- package/skills/find-cohort-gap/references/saturation_query_templates.md +143 -0
- package/skills/find-cohort-gap/skill.yml +35 -0
- package/skills/find-journal/POLICY.md +87 -0
- package/skills/find-journal/SKILL.md +340 -0
- package/skills/find-journal/references/journal_profiles/AJNR.md +29 -0
- package/skills/find-journal/references/journal_profiles/AJR.md +30 -0
- package/skills/find-journal/references/journal_profiles/Abdominal_Radiology.md +30 -0
- package/skills/find-journal/references/journal_profiles/Academic_Radiology.md +30 -0
- package/skills/find-journal/references/journal_profiles/Annals_of_Internal_Medicine.md +33 -0
- package/skills/find-journal/references/journal_profiles/Artificial_Intelligence_in_Medicine.md +28 -0
- package/skills/find-journal/references/journal_profiles/BMC_Medicine.md +31 -0
- package/skills/find-journal/references/journal_profiles/British_Journal_of_Radiology.md +39 -0
- package/skills/find-journal/references/journal_profiles/CVIR.md +30 -0
- package/skills/find-journal/references/journal_profiles/Chest.md +39 -0
- package/skills/find-journal/references/journal_profiles/Clinical_Radiology.md +30 -0
- package/skills/find-journal/references/journal_profiles/Clinical_and_Molecular_Hepatology.md +32 -0
- package/skills/find-journal/references/journal_profiles/Diabetes_Metabolism_Journal.md +36 -0
- package/skills/find-journal/references/journal_profiles/Diagnostic_and_Interventional_Radiology.md +32 -0
- package/skills/find-journal/references/journal_profiles/Endocrinology_and_Metabolism.md +37 -0
- package/skills/find-journal/references/journal_profiles/European_Journal_of_Preventive_Cardiology.md +39 -0
- package/skills/find-journal/references/journal_profiles/European_Radiology.md +29 -0
- package/skills/find-journal/references/journal_profiles/Hepatology_Communications.md +40 -0
- package/skills/find-journal/references/journal_profiles/Hepatology_International.md +37 -0
- package/skills/find-journal/references/journal_profiles/IEEE_JBHI.md +28 -0
- package/skills/find-journal/references/journal_profiles/IEEE_TMI.md +28 -0
- package/skills/find-journal/references/journal_profiles/INSI.md +29 -0
- package/skills/find-journal/references/journal_profiles/Investigative_Radiology.md +25 -0
- package/skills/find-journal/references/journal_profiles/JACC_Advances.md +41 -0
- package/skills/find-journal/references/journal_profiles/JACC_Asia.md +30 -0
- package/skills/find-journal/references/journal_profiles/JACR.md +28 -0
- package/skills/find-journal/references/journal_profiles/JAMA.md +40 -0
- package/skills/find-journal/references/journal_profiles/JAMA_Network_Open.md +30 -0
- package/skills/find-journal/references/journal_profiles/JCSM.md +39 -0
- package/skills/find-journal/references/journal_profiles/JKMS.md +32 -0
- package/skills/find-journal/references/journal_profiles/JMIR.md +29 -0
- package/skills/find-journal/references/journal_profiles/JMIR_Medical_Education.md +29 -0
- package/skills/find-journal/references/journal_profiles/JNIS.md +35 -0
- package/skills/find-journal/references/journal_profiles/JVIR.md +31 -0
- package/skills/find-journal/references/journal_profiles/Journal_of_Biomedical_Informatics.md +29 -0
- package/skills/find-journal/references/journal_profiles/Journal_of_Clinical_Endocrinology_and_Metabolism.md +40 -0
- package/skills/find-journal/references/journal_profiles/Journal_of_Magnetic_Resonance_Imaging.md +30 -0
- package/skills/find-journal/references/journal_profiles/Journal_of_Nuclear_Medicine.md +31 -0
- package/skills/find-journal/references/journal_profiles/Journal_of_Stroke.md +32 -0
- package/skills/find-journal/references/journal_profiles/KJR.md +38 -0
- package/skills/find-journal/references/journal_profiles/Korean_Circulation_Journal.md +38 -0
- package/skills/find-journal/references/journal_profiles/Korean_Journal_of_Internal_Medicine.md +36 -0
- package/skills/find-journal/references/journal_profiles/Lancet_Diabetes_and_Endocrinology.md +40 -0
- package/skills/find-journal/references/journal_profiles/Lancet_Gastroenterology_and_Hepatology.md +49 -0
- package/skills/find-journal/references/journal_profiles/Lancet_Infectious_Diseases.md +38 -0
- package/skills/find-journal/references/journal_profiles/Lancet_Neurology.md +39 -0
- package/skills/find-journal/references/journal_profiles/Lancet_Oncology.md +40 -0
- package/skills/find-journal/references/journal_profiles/Lancet_Psychiatry.md +38 -0
- package/skills/find-journal/references/journal_profiles/Lancet_Public_Health.md +30 -0
- package/skills/find-journal/references/journal_profiles/Lancet_Respiratory_Medicine.md +39 -0
- package/skills/find-journal/references/journal_profiles/Liver_International.md +33 -0
- package/skills/find-journal/references/journal_profiles/Medical_Image_Analysis.md +28 -0
- package/skills/find-journal/references/journal_profiles/NEJM.md +33 -0
- package/skills/find-journal/references/journal_profiles/Nature_Machine_Intelligence.md +31 -0
- package/skills/find-journal/references/journal_profiles/Nature_Medicine.md +39 -0
- package/skills/find-journal/references/journal_profiles/Neuroradiology.md +31 -0
- package/skills/find-journal/references/journal_profiles/Nutrition_Metabolism_and_Cardiovascular_Diseases.md +39 -0
- package/skills/find-journal/references/journal_profiles/PLOS_Medicine.md +32 -0
- package/skills/find-journal/references/journal_profiles/RYAI.md +28 -0
- package/skills/find-journal/references/journal_profiles/Radiology.md +29 -0
- package/skills/find-journal/references/journal_profiles/Skeletal_Radiology.md +31 -0
- package/skills/find-journal/references/journal_profiles/Stroke.md +37 -0
- package/skills/find-journal/references/journal_profiles/The_BMJ.md +31 -0
- package/skills/find-journal/references/journal_profiles/The_Lancet.md +31 -0
- package/skills/find-journal/references/journal_profiles/The_Lancet_Digital_Health.md +29 -0
- package/skills/find-journal/references/journal_profiles/World_Journal_of_Hepatology.md +53 -0
- package/skills/find-journal/references/journal_profiles/npj_Digital_Medicine.md +29 -0
- package/skills/find-journal/skill.yml +34 -0
- package/skills/fulltext-retrieval/SKILL.md +174 -0
- package/skills/fulltext-retrieval/fetch_oa.py +433 -0
- package/skills/fulltext-retrieval/pdf_to_md.py +160 -0
- package/skills/fulltext-retrieval/skill.yml +41 -0
- package/skills/generate-codebook/SKILL.md +155 -0
- package/skills/generate-codebook/references/codebook_schema.md +76 -0
- package/skills/generate-codebook/scripts/generate_codebook.py +278 -0
- package/skills/generate-codebook/skill.yml +35 -0
- package/skills/generate-codebook/tests/test_generate_codebook.sh +76 -0
- package/skills/grant-builder/SKILL.md +251 -0
- package/skills/grant-builder/skill.yml +34 -0
- package/skills/humanize/SKILL.md +251 -0
- package/skills/humanize/references/ai_patterns.md +571 -0
- package/skills/humanize/skill.yml +33 -0
- package/skills/intake-project/SKILL.md +264 -0
- package/skills/intake-project/skill.yml +34 -0
- package/skills/lit-sync/SKILL.md +448 -0
- package/skills/lit-sync/references/locale/ko/note_templates.md +110 -0
- package/skills/lit-sync/skill.yml +52 -0
- package/skills/lit-sync/tests/test_poll_logic.sh +92 -0
- package/skills/ma-scout/SKILL.md +640 -0
- package/skills/ma-scout/references/project_readme_template.md +95 -0
- package/skills/ma-scout/references/project_readme_template_ko.md +82 -0
- package/skills/ma-scout/skill.yml +33 -0
- package/skills/make-figures/SKILL.md +957 -0
- package/skills/make-figures/references/critic_rubrics/data_plot.md +166 -0
- package/skills/make-figures/references/critic_rubrics/flow_diagram.md +169 -0
- package/skills/make-figures/references/design_principles.md +181 -0
- package/skills/make-figures/references/exemplar_diagrams/README.md +65 -0
- package/skills/make-figures/references/exemplar_diagrams/consort/README.md +15 -0
- package/skills/make-figures/references/exemplar_diagrams/consort/template_input.yaml +37 -0
- package/skills/make-figures/references/exemplar_diagrams/consort/template_output.pdf +0 -0
- package/skills/make-figures/references/exemplar_diagrams/consort/template_output.png +0 -0
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# ROBINS-E Assessment Guide
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Risk Of Bias In Non-randomized Studies — of Exposures.
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Reference: Higgins JPT et al. Environment International 2024;186:108602. doi: 10.1016/j.envint.2024.108602.
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Website: https://www.riskofbias.info/welcome/robins-e-tool
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## Purpose
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ROBINS-E assesses the risk of **material bias** in individual observational studies examining the effect of an **exposure** on an outcome. Designed for follow-up (cohort) studies. Material bias = bias sufficient to affect the direction of the estimated effect or impact the ability to draw conclusions.
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## Structure
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ROBINS-E has:
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- **Planning stage**: List confounders and consider appropriateness
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- **Preliminary considerations** (per study): Sections A-E
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- **7 bias domains** with signalling questions
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- **Overall judgment** across domains
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Signalling question responses: Yes / Probably yes / Probably no / No / No information
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(Some questions have domain-specific response options)
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Domain judgments: Low risk of bias / Some concerns / High risk of bias / Very high risk of bias
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Three outputs per domain:
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1. Risk of bias judgment (algorithmic, overridable)
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2. Predicted direction of bias
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3. Whether bias threatens conclusions (Yes / No / Cannot tell)
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## Planning Stage
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### P1: List Important Confounding Factors
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Specify confounders relevant to all or most studies on this topic. State whether they are particular to specific exposure-outcome combinations.
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### P2: Appropriateness Assessment
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Will the review use the ROBINS-E assessment of appropriateness (study sensitivity)? → Yes / No
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If Yes, complete Appendix 1 (Parts I, II, III).
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## Preliminary Considerations (Per Study)
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### A. Specify the Result Being Assessed
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- ROBINS-E is specific to a particular study result
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- Different results from the same study may have different risks of bias
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- Specify the numerical result (e.g., RR=1.52, 95% CI 0.83 to 2.77)
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### B. Decide Whether to Proceed
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- Some study characteristics may directly indicate very high risk of bias
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- Screening section to identify such situations before detailed assessment
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### C. Specify the Analysis
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- Gather information about participants, exposure measure(s), outcome, and analysis methods
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### D. Specify the Causal Effect
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- Define the causal effect of exposure being estimated
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- This is essential: the causal effect defines what the result would be in the absence of bias
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### E. Evaluation of Confounding Factors
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- Identify which important confounders (from P1) are controlled for in the analysis
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- Assess whether control is adequate
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## Domain 1: Risk of Bias Due to Confounding
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### Key Signalling Questions
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- Were all important confounding domains measured?
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- Were all important confounding domains adequately controlled for?
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- Was the analysis adjusted for all important confounders, or was matching/restriction used?
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- Were appropriate methods used to control confounding (regression, propensity score, IP weighting)?
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### Judgment
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- **Low risk of bias (except for concerns about uncontrolled confounding)**: All critical confounders well addressed, but residual uncontrolled confounding cannot be eliminated in observational studies
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- **Some concerns**: Minor concerns about residual confounding
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- **High risk of bias**: Important confounders not adequately controlled
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- **Very high risk of bias**: Critical confounding renders the estimate unreliable
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*Note: For Domain 1, 'Low risk' is expressed as "Low risk of bias (except for concerns about uncontrolled confounding)" because uncontrolled confounding can never be fully excluded in observational studies.*
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## Domain 2: Risk of Bias Arising from Measurement of the Exposure
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### Key Signalling Questions
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- Was the exposure clearly defined and consistently measured?
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- Was exposure assessment valid and reliable?
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- Was exposure classification differential with respect to the outcome?
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### Judgment
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- **High**: Exposure measurement likely to introduce material bias
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- **Very high**: Exposure so poorly measured that no useful estimate possible
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## Domain 3: Risk of Bias in Selection of Participants
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## Domain 4: Risk of Bias Due to Post-exposure Interventions
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### Key Signalling Questions
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- Were there post-exposure interventions that could have affected the outcome?
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### Judgment
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## Domain 5: Risk of Bias Due to Missing Data
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### Key Signalling Questions
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- Were outcome data available for all or nearly all participants?
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## Domain 6: Risk of Bias Arising from Measurement of the Outcome
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### Key Signalling Questions
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- Could outcome measurement have been influenced by knowledge of exposure status?
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- Was the outcome defined and assessed using validated methods?
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### Judgment
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- **Some concerns**: Minor measurement concerns
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- **High**: Outcome measurement likely differentially affected by exposure knowledge
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- **Very high**: Outcome measurement severely compromised
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## Domain 7: Risk of Bias in Selection of the Reported Result
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### Key Signalling Questions
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### Judgment
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## Overall Risk of Bias
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Three overall judgments are derived from the domain judgments:
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1. **Overall risk of bias**: Most conservative across domains
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- **Low**: Low in all domains
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- **Some concerns**: Some concerns in at least one domain, but no high/very high
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- **High**: High in at least one domain, but not very high in any
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- **Very high**: Very high in at least one domain
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2. **Overall predicted direction of bias**: Considering all domains together
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3. **Overall: does bias threaten conclusions?**: Yes / No / Cannot tell
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Justification should be provided when overriding algorithm-suggested judgments.
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## When to Use
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- Systematic reviews of observational studies examining exposure effects (environmental, occupational, behavioral, dietary)
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- Currently designed for cohort (follow-up) studies
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- Not for case-control studies (extension planned)
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- Not for intervention studies (use ROBINS-I instead)
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179
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+
- Complementary to GRADE for rating certainty of evidence from observational studies
|
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1
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# ROBINS-I Assessment Guide
|
|
2
|
+
|
|
3
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+
Risk Of Bias In Non-randomised Studies - of Interventions.
|
|
4
|
+
Reference: Sterne JAC et al. BMJ 2016;355:i4919.
|
|
5
|
+
|
|
6
|
+
## Structure
|
|
7
|
+
|
|
8
|
+
ROBINS-I assesses 7 domains + overall judgment.
|
|
9
|
+
- **Signalling questions**: Yes / Probably yes / Probably no / No / No information
|
|
10
|
+
- **Domain judgment**: Low / Moderate / Serious / Critical / No information
|
|
11
|
+
- **Overall judgment**: Lowest of all domain judgments (most conservative)
|
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12
|
+
|
|
13
|
+
## Pre-assessment Requirements
|
|
14
|
+
|
|
15
|
+
Before applying ROBINS-I, specify:
|
|
16
|
+
1. The target trial (what RCT would ideally answer this question?)
|
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17
|
+
2. The effect of interest (assignment to intervention vs starting and adhering)
|
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18
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+
3. Confounders to be controlled
|
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19
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+
|
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20
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+
## Domain 1: Bias Due to Confounding
|
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21
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+
|
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22
|
+
### Key Questions
|
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23
|
+
- Is there potential for confounding not accounted for?
|
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24
|
+
- Did the authors use appropriate methods to control confounding (matching, regression, propensity score)?
|
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25
|
+
|
|
26
|
+
### Judgment
|
|
27
|
+
- **Low**: All critical confounders appropriately controlled
|
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28
|
+
- **Moderate**: Minor concerns about residual confounding
|
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29
|
+
- **Serious**: Important confounders not adequately controlled
|
|
30
|
+
- **Critical**: Confounding so severe that no useful estimate possible
|
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31
|
+
|
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32
|
+
## Domain 2: Bias in Selection of Participants
|
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33
|
+
|
|
34
|
+
### Key Questions
|
|
35
|
+
- Was selection into the study related to both intervention and outcome?
|
|
36
|
+
- Was start of follow-up and intervention aligned?
|
|
37
|
+
- Were adjustments made for different start times?
|
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38
|
+
|
|
39
|
+
## Domain 3: Bias in Classification of Interventions
|
|
40
|
+
|
|
41
|
+
### Key Questions
|
|
42
|
+
- Were intervention groups clearly defined?
|
|
43
|
+
- Was information used to classify interventions recorded at the start of the intervention?
|
|
44
|
+
- Could classification of intervention status have been affected by knowledge of the outcome?
|
|
45
|
+
|
|
46
|
+
## Domain 4: Bias Due to Deviations from Intended Interventions
|
|
47
|
+
|
|
48
|
+
### Key Questions
|
|
49
|
+
- Were there deviations from intended intervention beyond what would be expected?
|
|
50
|
+
- Were these deviations unbalanced between groups and likely to affect outcomes?
|
|
51
|
+
- Were important co-interventions balanced across groups?
|
|
52
|
+
|
|
53
|
+
## Domain 5: Bias Due to Missing Data
|
|
54
|
+
|
|
55
|
+
### Key Questions
|
|
56
|
+
- Were outcome data available for all or nearly all participants?
|
|
57
|
+
- Were participants excluded due to missing data on intervention or other variables?
|
|
58
|
+
- Was the proportion of missing data similar across groups?
|
|
59
|
+
- Were appropriate methods used to handle missing data?
|
|
60
|
+
|
|
61
|
+
## Domain 6: Bias in Measurement of Outcomes
|
|
62
|
+
|
|
63
|
+
### Key Questions
|
|
64
|
+
- Could outcome measurement have been influenced by knowledge of intervention?
|
|
65
|
+
- Were outcome assessors blinded?
|
|
66
|
+
- Were outcome measures comparable across groups?
|
|
67
|
+
|
|
68
|
+
## Domain 7: Bias in Selection of Reported Result
|
|
69
|
+
|
|
70
|
+
### Key Questions
|
|
71
|
+
- Were multiple outcome measurements reported?
|
|
72
|
+
- Were multiple analyses performed?
|
|
73
|
+
- Is the reported result likely selected from among multiple measurements or analyses?
|
|
74
|
+
|
|
75
|
+
## Overall Risk of Bias
|
|
76
|
+
|
|
77
|
+
The overall judgment is the most conservative across all domains:
|
|
78
|
+
- **Low**: Low risk in all domains
|
|
79
|
+
- **Moderate**: Low or moderate in all domains
|
|
80
|
+
- **Serious**: Serious in at least one domain, but not critical in any
|
|
81
|
+
- **Critical**: Critical in at least one domain
|
|
82
|
+
|
|
83
|
+
## Recommendation for Synthesis
|
|
84
|
+
|
|
85
|
+
- Studies at **critical** risk of bias should be excluded from meta-analysis
|
|
86
|
+
- Present critical studies in a separate table for completeness
|
|
87
|
+
- Conduct sensitivity analysis excluding serious risk of bias studies
|
|
@@ -0,0 +1,114 @@
|
|
|
1
|
+
# ROBIS Assessment Guide
|
|
2
|
+
|
|
3
|
+
Risk Of Bias In Systematic Reviews, version 1.2.
|
|
4
|
+
Reference: Whiting P et al. J Clin Epidemiol 2016;69:225-234.
|
|
5
|
+
|
|
6
|
+
## Purpose
|
|
7
|
+
|
|
8
|
+
ROBIS assesses the risk of bias **in systematic reviews themselves** (not in individual studies). It evaluates whether the review process was conducted appropriately and whether the conclusions are trustworthy.
|
|
9
|
+
|
|
10
|
+
Applicable to reviews of: interventions, aetiology, diagnosis, and prognosis.
|
|
11
|
+
|
|
12
|
+
## Structure
|
|
13
|
+
|
|
14
|
+
ROBIS has 3 phases:
|
|
15
|
+
- **Phase 1** (optional): Assessing relevance of the review to the target question
|
|
16
|
+
- **Phase 2**: Identifying concerns with the review process (4 domains, signalling questions)
|
|
17
|
+
- **Phase 3**: Judging overall risk of bias in the review
|
|
18
|
+
|
|
19
|
+
Signalling questions answered: Y (Yes) / PY (Probably Yes) / PN (Probably No) / N (No) / NI (No Information)
|
|
20
|
+
|
|
21
|
+
Domain concerns rated: LOW / HIGH / UNCLEAR
|
|
22
|
+
|
|
23
|
+
## Phase 1: Assessing Relevance (Optional)
|
|
24
|
+
|
|
25
|
+
State the target question and compare it with the question addressed by the review.
|
|
26
|
+
|
|
27
|
+
For **intervention reviews**, specify: Patients/Population, Intervention(s), Comparator(s), Outcome(s)
|
|
28
|
+
|
|
29
|
+
For **aetiology reviews**, specify: Patients/Population, Exposure(s) and Comparator(s), Outcome(s)
|
|
30
|
+
|
|
31
|
+
For **DTA reviews**, specify: Patients, Index test(s), Reference standard, Target condition
|
|
32
|
+
|
|
33
|
+
For **prognostic reviews**, specify: Patients, Outcome to be predicted, Intended use of model, Intended moment in time
|
|
34
|
+
|
|
35
|
+
Final question: Does the question addressed by the review match the target question? → YES / NO / UNCLEAR
|
|
36
|
+
|
|
37
|
+
## Phase 2: Identifying Concerns with the Review Process
|
|
38
|
+
|
|
39
|
+
### Domain 1: Study Eligibility Criteria
|
|
40
|
+
|
|
41
|
+
Describe the study eligibility criteria, any restrictions, and whether objectives and criteria were pre-specified.
|
|
42
|
+
|
|
43
|
+
#### Signalling Questions
|
|
44
|
+
1.1 Did the review adhere to pre-defined objectives and eligibility criteria?
|
|
45
|
+
1.2 Were the eligibility criteria appropriate for the review question?
|
|
46
|
+
1.3 Were eligibility criteria unambiguous?
|
|
47
|
+
1.4 Were any restrictions in eligibility criteria based on study characteristics appropriate (e.g., date, sample size, study quality, outcomes measured)?
|
|
48
|
+
1.5 Were any restrictions in eligibility criteria based on sources of information appropriate (e.g., publication status or format, language, availability of data)?
|
|
49
|
+
|
|
50
|
+
**Concerns regarding specification of study eligibility criteria:** LOW / HIGH / UNCLEAR
|
|
51
|
+
|
|
52
|
+
### Domain 2: Identification and Selection of Studies
|
|
53
|
+
|
|
54
|
+
Describe methods of study identification and selection (e.g., number of reviewers involved).
|
|
55
|
+
|
|
56
|
+
#### Signalling Questions
|
|
57
|
+
2.1 Did the search include an appropriate range of databases/electronic sources for published and unpublished reports?
|
|
58
|
+
2.2 Were methods additional to database searching used to identify relevant reports?
|
|
59
|
+
2.3 Were the terms and structure of the search strategy likely to retrieve as many eligible studies as possible?
|
|
60
|
+
2.4 Were restrictions based on date, publication format, or language appropriate?
|
|
61
|
+
2.5 Were efforts made to minimise error in selection of studies?
|
|
62
|
+
|
|
63
|
+
**Concerns regarding methods used to identify and/or select studies:** LOW / HIGH / UNCLEAR
|
|
64
|
+
|
|
65
|
+
### Domain 3: Data Collection and Study Appraisal
|
|
66
|
+
|
|
67
|
+
Describe methods of data collection, what data were extracted, how risk of bias was assessed (e.g., number of reviewers), and the tool used.
|
|
68
|
+
|
|
69
|
+
#### Signalling Questions
|
|
70
|
+
3.1 Were efforts made to minimise error in data collection?
|
|
71
|
+
3.2 Were sufficient study characteristics available for both review authors and readers to be able to interpret the results?
|
|
72
|
+
3.3 Were all relevant study results collected for use in the synthesis?
|
|
73
|
+
3.4 Was risk of bias (or methodological quality) formally assessed using appropriate criteria?
|
|
74
|
+
3.5 Were efforts made to minimise error in risk of bias assessment?
|
|
75
|
+
|
|
76
|
+
**Concerns regarding methods used to collect data and appraise studies:** LOW / HIGH / UNCLEAR
|
|
77
|
+
|
|
78
|
+
### Domain 4: Synthesis and Findings
|
|
79
|
+
|
|
80
|
+
Describe synthesis methods.
|
|
81
|
+
|
|
82
|
+
#### Signalling Questions
|
|
83
|
+
4.1 Did the synthesis include all studies that it should?
|
|
84
|
+
4.2 Were all pre-defined analyses reported or departures explained?
|
|
85
|
+
4.3 Was the synthesis appropriate given the nature and similarity in the research questions, study designs and outcomes across included studies?
|
|
86
|
+
4.4 Was between-study variation (heterogeneity) minimal or addressed in the synthesis?
|
|
87
|
+
4.5 Were the findings robust e.g. as demonstrated through funnel plot or sensitivity analyses?
|
|
88
|
+
4.6 Were biases in primary studies minimal or addressed in the synthesis?
|
|
89
|
+
|
|
90
|
+
**Concerns regarding the synthesis and findings:** LOW / HIGH / UNCLEAR
|
|
91
|
+
|
|
92
|
+
## Phase 3: Judging Risk of Bias in the Review
|
|
93
|
+
|
|
94
|
+
Describe whether conclusions were supported by the evidence.
|
|
95
|
+
|
|
96
|
+
### Signalling Questions
|
|
97
|
+
A. Did the interpretation of findings address all of the concerns identified in Domains 1 to 4?
|
|
98
|
+
B. Was the relevance of identified studies to the review's research question appropriately considered?
|
|
99
|
+
C. Did the reviewers avoid emphasizing results on the basis of their statistical significance?
|
|
100
|
+
|
|
101
|
+
**Risk of bias in the review:** LOW / HIGH / UNCLEAR
|
|
102
|
+
|
|
103
|
+
### Judgment Algorithm
|
|
104
|
+
- **Low risk**: Concerns are low across all domains and Phase 3 questions are favorable
|
|
105
|
+
- **High risk**: High concerns in one or more domains, or the interpretation does not adequately address identified concerns
|
|
106
|
+
- **Unclear**: Insufficient information to make a judgment
|
|
107
|
+
|
|
108
|
+
## When to Use
|
|
109
|
+
|
|
110
|
+
- Assessing quality of existing systematic reviews (overview of reviews)
|
|
111
|
+
- Evaluating competing systematic reviews on the same topic
|
|
112
|
+
- Guideline development (appraising evidence base)
|
|
113
|
+
- Critical appraisal teaching and journal clubs
|
|
114
|
+
- Not for assessing individual primary studies (use QUADAS-2, RoB 2, ROBINS-I, etc.)
|
|
@@ -0,0 +1,126 @@
|
|
|
1
|
+
# ROB-ME Assessment Guide
|
|
2
|
+
|
|
3
|
+
Risk Of Bias due to Missing Evidence in a meta-analysis.
|
|
4
|
+
Reference: Page MJ et al. BMJ 2023;383:e076"; ROB-ME Cribsheet Version 1, October 2023.
|
|
5
|
+
Website: https://www.riskofbias.info/welcome/rob-me-tool
|
|
6
|
+
|
|
7
|
+
## Purpose
|
|
8
|
+
|
|
9
|
+
ROB-ME assesses the risk of bias in a **pairwise meta-analysis result** due to missing evidence — encompassing both non-reporting biases (selective reporting of results) and non-publication biases (unpublished studies). It is applied at the synthesis level (not individual study level).
|
|
10
|
+
|
|
11
|
+
## Structure
|
|
12
|
+
|
|
13
|
+
ROB-ME has 5 steps applied to **each meta-analysis** in a systematic review:
|
|
14
|
+
1. Select and define meta-analyses to assess
|
|
15
|
+
2. Determine which studies have missing results (Results Matrix)
|
|
16
|
+
3. Consider the potential for missing studies across the systematic review
|
|
17
|
+
4. Assess risk of bias due to missing evidence (signalling questions)
|
|
18
|
+
5. Overall risk of bias judgment
|
|
19
|
+
|
|
20
|
+
Response options: Y (Yes) / PY (Probably Yes) / PN (Probably No) / N (No) / NI (No Information) / NA (Not Applicable)
|
|
21
|
+
|
|
22
|
+
Green-underlined responses are potential markers for **low** risk of bias.
|
|
23
|
+
Red responses are potential markers for **a** risk of bias.
|
|
24
|
+
|
|
25
|
+
## Step 1: Select and Define Meta-analyses
|
|
26
|
+
|
|
27
|
+
For each meta-analysis, specify:
|
|
28
|
+
- The PICO: Participants, Intervention, Comparator, Outcome
|
|
29
|
+
- Eligible study designs
|
|
30
|
+
- Eligible outcome definitions (measures, metrics, time points)
|
|
31
|
+
- Eligible methods of analysis (analysis populations, crude vs adjusted estimates)
|
|
32
|
+
|
|
33
|
+
## Step 2: Determine Which Studies Have Missing Results (Results Matrix)
|
|
34
|
+
|
|
35
|
+
For each study meeting inclusion criteria, create a Results Matrix using these symbols:
|
|
36
|
+
|
|
37
|
+
| Symbol | Meaning |
|
|
38
|
+
|--------|---------|
|
|
39
|
+
| check (green) | A study result is available for inclusion in the meta-analysis |
|
|
40
|
+
| ~ (yellow) | No study result available, for a reason **unrelated** to the P value, magnitude or direction |
|
|
41
|
+
| ? (orange) | Unclear whether an eligible result was generated |
|
|
42
|
+
| X (red) | No study result available, **likely because of** the P value, magnitude or direction |
|
|
43
|
+
|
|
44
|
+
Record: Study ID, Source(s) used, Number of participants analysed, and availability status for each meta-analysis.
|
|
45
|
+
|
|
46
|
+
Also record any known information about the results (direction of effect, statistical significance, or narrative descriptions).
|
|
47
|
+
|
|
48
|
+
## Step 3: Consider the Potential for Missing Studies
|
|
49
|
+
|
|
50
|
+
Answer the following questions **once** for the systematic review as a whole:
|
|
51
|
+
|
|
52
|
+
### Signalling Questions
|
|
53
|
+
3.1 Were prospectively registered studies or studies identified for a prospective meta-analysis the only type of study eligible for inclusion?
|
|
54
|
+
- **Y**: inception cohort → lower risk of missing studies
|
|
55
|
+
- **N**: proceed to 3.2
|
|
56
|
+
|
|
57
|
+
3.2 If N to 3.1: Would you expect every eligible study to be identifiable regardless of its results?
|
|
58
|
+
- **NA/Y/PY**: lower risk
|
|
59
|
+
- **PN/N**: higher risk — proceed to 3.3
|
|
60
|
+
|
|
61
|
+
3.3 If Y/PY to 3.2: Were you likely to have found all eligible studies regardless of their results?
|
|
62
|
+
- Consider: trial registers searched, search strategy designed to retrieve regardless of outcomes
|
|
63
|
+
- **NA/Y/PY**: lower risk
|
|
64
|
+
- **PN/N**: higher risk — check the box indicating potential for missing studies
|
|
65
|
+
|
|
66
|
+
## Step 4: Assess Risk of Bias (per meta-analysis)
|
|
67
|
+
|
|
68
|
+
Specify the meta-analysis details: description, summary effect estimate (95% CI), number of included studies and participants.
|
|
69
|
+
|
|
70
|
+
### Within-study Assessment ('Known Unknowns')
|
|
71
|
+
|
|
72
|
+
4.1 Of the studies identified, was there any for which no result was available for inclusion in the meta-analysis, **likely because of the P value, magnitude or direction** of the result generated (refer to Step 2)?
|
|
73
|
+
- Answer 'Yes' if any study has an 'X' in the Results Matrix for this meta-analysis
|
|
74
|
+
- **Y/N**
|
|
75
|
+
|
|
76
|
+
4.2 If Y to 4.1: Is it likely that there would be a notable change to the summary effect estimate if the omitted results had been included?
|
|
77
|
+
- Consider: amount of missing evidence relative to total; direction of effect in omitted studies; fixed-effect vs random-effects model
|
|
78
|
+
- **Trivial missing → 'No/Probably no'**; Non-trivial with differing direction → 'Yes/Probably yes'
|
|
79
|
+
- **NA/Y/PY/PN/N/NI**
|
|
80
|
+
|
|
81
|
+
### Within-study Assessment ('Unknown Unknowns')
|
|
82
|
+
|
|
83
|
+
4.3 Of the studies identified, was there any for which it was unclear whether an eligible result was generated (refer to Step 2)?
|
|
84
|
+
- Answer 'Yes' if any study has a '?' in the Results Matrix
|
|
85
|
+
- **Y/N**
|
|
86
|
+
|
|
87
|
+
4.4 If Y to 4.3: Is it likely that there would be a notable change to the summary effect estimate if the potentially omitted results had been included?
|
|
88
|
+
- Consider same factors as 4.2 but for 'potentially' missing evidence
|
|
89
|
+
- **NA/Y/PY/PN/N/NI**
|
|
90
|
+
|
|
91
|
+
### Across-study Assessment
|
|
92
|
+
|
|
93
|
+
4.5 Do circumstances (identified in Step 3) indicate potential for some eligible studies not being identified because of the P value, magnitude or direction of the results generated?
|
|
94
|
+
- Answer 'Yes' if the checkbox in Step 3 was checked
|
|
95
|
+
- **Y/N**
|
|
96
|
+
|
|
97
|
+
4.6 If Y to 4.5: Is it likely that studies not identified had results that were eligible for inclusion in the meta-analysis?
|
|
98
|
+
- Consider: core outcome sets, scope of outcome domain, whether missing studies would have measured this outcome
|
|
99
|
+
- **NA/Y/PY/PN/N**
|
|
100
|
+
|
|
101
|
+
4.7 If Y to 4.1, 4.3, or 4.5: Does the pattern of observed study results suggest that the meta-analysis is likely to be missing results that were systematically different (in terms of P value, magnitude or direction) from those observed?
|
|
102
|
+
- Methods: (1) funnel plot inspection, (2) funnel plot asymmetry test, (3) compare fixed-effect vs random-effects estimates, (4) inspect P values/direction in forest plot
|
|
103
|
+
- Distinguish small-study effects from non-reporting biases
|
|
104
|
+
- **NA/Y/PY/PN/N**
|
|
105
|
+
|
|
106
|
+
4.8 If Y/PY/NI to 4.2, 4.4, 4.6, or 4.7: Did sensitivity analyses suggest that the summary effect estimate was biased due to missing results?
|
|
107
|
+
- Consider: selection models, regression-based adjustment, restricting to largest studies
|
|
108
|
+
- **NA/Y/PY/PN/N**
|
|
109
|
+
|
|
110
|
+
## Step 5: Risk of Bias Judgment
|
|
111
|
+
|
|
112
|
+
### Judgment Scale
|
|
113
|
+
- **Low**: Little or no concern about missing evidence biasing the meta-analysis result
|
|
114
|
+
- **Some concerns**: Some concern but not sufficient to judge high risk
|
|
115
|
+
- **High**: The meta-analysis result is likely biased due to missing evidence
|
|
116
|
+
|
|
117
|
+
### Optional: Predicted Direction of Bias
|
|
118
|
+
- Favours experimental / Favours comparator / Towards null / Away from null / Unpredictable
|
|
119
|
+
|
|
120
|
+
## When to Use
|
|
121
|
+
|
|
122
|
+
- Every pairwise meta-analysis in a systematic review (PRISMA 2020 recommends this)
|
|
123
|
+
- Replaces informal funnel plot interpretation with a structured assessment
|
|
124
|
+
- Complements individual study RoB tools (RoB 2, ROBINS-I, QUADAS-2)
|
|
125
|
+
- Not designed for network meta-analysis (use RoB NMA instead)
|
|
126
|
+
- Should be completed by someone familiar with the meta-analysis methods and included studies
|
|
@@ -0,0 +1,79 @@
|
|
|
1
|
+
# RoB 2 Assessment Guide
|
|
2
|
+
|
|
3
|
+
Revised Cochrane Risk-of-Bias tool for Randomised Trials.
|
|
4
|
+
Reference: Sterne JAC et al. BMJ 2019;366:l4898. PMID: 31462531.
|
|
5
|
+
|
|
6
|
+
## Structure
|
|
7
|
+
|
|
8
|
+
RoB 2 assesses 5 domains for each outcome in each study.
|
|
9
|
+
- **Signalling questions**: Yes / Probably yes / Probably no / No / No information
|
|
10
|
+
- **Domain judgment**: Low risk / Some concerns / High risk
|
|
11
|
+
- **Overall judgment**: Most conservative across all domains
|
|
12
|
+
|
|
13
|
+
## Domain 1: Bias Arising from the Randomisation Process
|
|
14
|
+
|
|
15
|
+
### Signalling Questions
|
|
16
|
+
1. Was the allocation sequence random?
|
|
17
|
+
2. Was the allocation sequence concealed until participants were enrolled and assigned?
|
|
18
|
+
3. Did baseline differences between groups suggest a problem with the randomisation process?
|
|
19
|
+
|
|
20
|
+
### Judgment
|
|
21
|
+
- **Low**: Adequate random sequence generation AND allocation concealment, no problematic baseline imbalances
|
|
22
|
+
- **Some concerns**: Information insufficient to permit judgment
|
|
23
|
+
- **High**: Inadequate sequence generation or concealment, or problematic baseline imbalances suggest failure
|
|
24
|
+
|
|
25
|
+
## Domain 2: Bias Due to Deviations from Intended Interventions
|
|
26
|
+
|
|
27
|
+
### Effect of Interest: Assignment (intention-to-treat)
|
|
28
|
+
1. Were participants aware of their assigned intervention during the trial?
|
|
29
|
+
2. Were carers and people delivering the interventions aware of assigned intervention?
|
|
30
|
+
3. Were there deviations from the intended intervention that arose because of the trial context?
|
|
31
|
+
4. Were these deviations likely to have affected the outcome?
|
|
32
|
+
5. Was an appropriate analysis used to estimate the effect of assignment to intervention?
|
|
33
|
+
|
|
34
|
+
### Effect of Interest: Adherence (per-protocol)
|
|
35
|
+
1-2. Same as above
|
|
36
|
+
3. Were important non-protocol interventions balanced across groups?
|
|
37
|
+
4. Could failures in implementing the intervention have affected the outcome?
|
|
38
|
+
5. Did trial participants adhere to the assigned intervention regimen?
|
|
39
|
+
6. Was an appropriate analysis used to estimate the effect of adhering to intervention?
|
|
40
|
+
|
|
41
|
+
## Domain 3: Bias Due to Missing Outcome Data
|
|
42
|
+
|
|
43
|
+
### Signalling Questions
|
|
44
|
+
1. Were data for this outcome available for all, or nearly all, participants randomised?
|
|
45
|
+
2. Is there evidence that the result was not biased by missing outcome data?
|
|
46
|
+
3. Could missingness in the outcome depend on its true value?
|
|
47
|
+
4. Is it likely that missingness depended on its true value?
|
|
48
|
+
|
|
49
|
+
### Judgment
|
|
50
|
+
- **Low**: Data available for all/nearly all (>95%), or evidence result not biased by missing data
|
|
51
|
+
- **Some concerns**: Missingness could depend on true value but unlikely
|
|
52
|
+
- **High**: Missingness likely dependent on true value
|
|
53
|
+
|
|
54
|
+
## Domain 4: Bias in Measurement of the Outcome
|
|
55
|
+
|
|
56
|
+
### Signalling Questions
|
|
57
|
+
1. Was the method of measuring the outcome inappropriate?
|
|
58
|
+
2. Could measurement or ascertainment of the outcome have differed between groups?
|
|
59
|
+
3. Were outcome assessors aware of the intervention received by study participants?
|
|
60
|
+
4. Could assessment of the outcome have been influenced by knowledge of intervention?
|
|
61
|
+
5. Is it likely that assessment was influenced by knowledge of intervention?
|
|
62
|
+
|
|
63
|
+
## Domain 5: Bias in Selection of the Reported Result
|
|
64
|
+
|
|
65
|
+
### Signalling Questions
|
|
66
|
+
1. Were the data that produced this result analysed in accordance with a pre-specified analysis plan finalised before unblinded outcome data were available?
|
|
67
|
+
2. Is the numerical result likely to have been selected from multiple eligible outcome measurements or analyses of the data?
|
|
68
|
+
|
|
69
|
+
## Overall Risk of Bias
|
|
70
|
+
|
|
71
|
+
- **Low risk**: Low risk in all domains
|
|
72
|
+
- **Some concerns**: Some concerns in at least one domain, but not high risk in any
|
|
73
|
+
- **High risk**: High risk in at least one domain, OR some concerns in multiple domains in a way that substantially lowers confidence
|
|
74
|
+
|
|
75
|
+
## When to Use
|
|
76
|
+
|
|
77
|
+
- Use for **individually randomised, parallel-group trials** (default)
|
|
78
|
+
- Variants available for: cluster-randomised trials, crossover trials
|
|
79
|
+
- Do NOT use for non-randomised studies (use ROBINS-I instead)
|