medsci-skills 4.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (702) hide show
  1. package/LICENSE +50 -0
  2. package/README.md +602 -0
  3. package/README_FIRST.md +27 -0
  4. package/bin/medsci-skills.js +159 -0
  5. package/installers/install-macos.command +19 -0
  6. package/installers/install-windows.cmd +26 -0
  7. package/installers/install-windows.ps1 +17 -0
  8. package/installers/install.py +218 -0
  9. package/metadata/skills_catalog.json +452 -0
  10. package/package.json +48 -0
  11. package/skills/academic-aio/SKILL.md +408 -0
  12. package/skills/academic-aio/references/case_studies/kjr_mllm_2025.md +82 -0
  13. package/skills/academic-aio/references/checklists/AIO_GENERAL.md +354 -0
  14. package/skills/academic-aio/references/journal_summarybox_templates.yaml +126 -0
  15. package/skills/academic-aio/references/oac_funding_checklist.yaml +129 -0
  16. package/skills/academic-aio/references/reporting_guideline_mapping.md +39 -0
  17. package/skills/academic-aio/references/schema_markup_templates/CodeRepository.jsonld +32 -0
  18. package/skills/academic-aio/references/schema_markup_templates/Dataset.jsonld +36 -0
  19. package/skills/academic-aio/references/schema_markup_templates/Person.jsonld +30 -0
  20. package/skills/academic-aio/references/schema_markup_templates/README.md +43 -0
  21. package/skills/academic-aio/references/schema_markup_templates/ScholarlyArticle.jsonld +55 -0
  22. package/skills/academic-aio/scripts/batch_metadata_audit.py +169 -0
  23. package/skills/academic-aio/scripts/validate_schema.py +118 -0
  24. package/skills/academic-aio/skill.yml +36 -0
  25. package/skills/academic-aio/templates/aio_audit_checklist.md.j2 +108 -0
  26. package/skills/add-journal/SKILL.md +482 -0
  27. package/skills/add-journal/skill.yml +33 -0
  28. package/skills/analyze-stats/SKILL.md +598 -0
  29. package/skills/analyze-stats/references/analysis_guides/missing_data.md +109 -0
  30. package/skills/analyze-stats/references/analysis_guides/nhis_icd10_mapping.md +247 -0
  31. package/skills/analyze-stats/references/analysis_guides/propensity_score.md +132 -0
  32. package/skills/analyze-stats/references/analysis_guides/regression.md +115 -0
  33. package/skills/analyze-stats/references/analysis_guides/repeated_measures.md +160 -0
  34. package/skills/analyze-stats/references/analysis_guides/survey_weighted.md +366 -0
  35. package/skills/analyze-stats/references/analysis_guides/test_selection.md +86 -0
  36. package/skills/analyze-stats/references/style/figure_style.mplstyle +69 -0
  37. package/skills/analyze-stats/references/style/theme_publication.R +147 -0
  38. package/skills/analyze-stats/references/table-standards/journal-profiles/ajr.yaml +51 -0
  39. package/skills/analyze-stats/references/table-standards/journal-profiles/european_radiology.yaml +55 -0
  40. package/skills/analyze-stats/references/table-standards/journal-profiles/jama.yaml +66 -0
  41. package/skills/analyze-stats/references/table-standards/journal-profiles/lancet.yaml +57 -0
  42. package/skills/analyze-stats/references/table-standards/journal-profiles/nejm.yaml +51 -0
  43. package/skills/analyze-stats/references/table-standards/journal-profiles/radiology.yaml +66 -0
  44. package/skills/analyze-stats/references/table-standards/table-standards.md +287 -0
  45. package/skills/analyze-stats/references/table-standards/table-types/diagnostic_accuracy.md +36 -0
  46. package/skills/analyze-stats/references/table-standards/table-types/meta_analysis.md +58 -0
  47. package/skills/analyze-stats/references/table-standards/table-types/model_comparison.md +36 -0
  48. package/skills/analyze-stats/references/table-standards/table-types/regression_results.md +50 -0
  49. package/skills/analyze-stats/references/table-standards/table-types/table1_demographics.md +51 -0
  50. package/skills/analyze-stats/references/table-standards/tool-comparison.md +79 -0
  51. package/skills/analyze-stats/references/templates/agreement_analysis.py +436 -0
  52. package/skills/analyze-stats/references/templates/dca_plot.R +237 -0
  53. package/skills/analyze-stats/references/templates/diagnostic_accuracy.py +401 -0
  54. package/skills/analyze-stats/references/templates/dta_meta_analysis.R +384 -0
  55. package/skills/analyze-stats/references/templates/forest_plot.py +412 -0
  56. package/skills/analyze-stats/references/templates/likert_summary.py +356 -0
  57. package/skills/analyze-stats/references/templates/meta_analysis.R +365 -0
  58. package/skills/analyze-stats/references/templates/propensity_score.py +478 -0
  59. package/skills/analyze-stats/references/templates/regression.py +425 -0
  60. package/skills/analyze-stats/references/templates/repeated_measures.py +434 -0
  61. package/skills/analyze-stats/references/templates/sample_size.R +382 -0
  62. package/skills/analyze-stats/references/templates/survey_weighted_analysis.py +411 -0
  63. package/skills/analyze-stats/references/templates/survival_analysis.py +325 -0
  64. package/skills/analyze-stats/references/templates/table1_demographics.py +287 -0
  65. package/skills/analyze-stats/scripts/check_generated_code.py +335 -0
  66. package/skills/analyze-stats/skill.yml +38 -0
  67. package/skills/analyze-stats/tests/fixtures/gen_bad.R +16 -0
  68. package/skills/analyze-stats/tests/fixtures/gen_bad.py +24 -0
  69. package/skills/analyze-stats/tests/fixtures/gen_clean.py +21 -0
  70. package/skills/analyze-stats/tests/test_generated_code.sh +59 -0
  71. package/skills/analyze-stats/tests/test_survival_template.sh +53 -0
  72. package/skills/author-strategy/SKILL.md +117 -0
  73. package/skills/author-strategy/analyze_patterns.py +303 -0
  74. package/skills/author-strategy/fetch_pubmed.py +374 -0
  75. package/skills/author-strategy/skill.yml +34 -0
  76. package/skills/batch-cohort/SKILL.md +223 -0
  77. package/skills/batch-cohort/references/base_template_knhanes.R +210 -0
  78. package/skills/batch-cohort/references/batch_template_generator.R +222 -0
  79. package/skills/batch-cohort/references/variable_coding_registry.md +136 -0
  80. package/skills/batch-cohort/skill.yml +35 -0
  81. package/skills/calc-sample-size/SKILL.md +491 -0
  82. package/skills/calc-sample-size/references/formulas.md +655 -0
  83. package/skills/calc-sample-size/references/observational_cohort.md +49 -0
  84. package/skills/calc-sample-size/skill.yml +51 -0
  85. package/skills/check-reporting/SKILL.md +534 -0
  86. package/skills/check-reporting/references/LICENSES.md +41 -0
  87. package/skills/check-reporting/references/checklists/AMSTAR2.md +54 -0
  88. package/skills/check-reporting/references/checklists/ARRIVE_2.md +234 -0
  89. package/skills/check-reporting/references/checklists/CARE.md +102 -0
  90. package/skills/check-reporting/references/checklists/CLAIM_2024.md +128 -0
  91. package/skills/check-reporting/references/checklists/CLEAR.md +113 -0
  92. package/skills/check-reporting/references/checklists/CONSORT.md +86 -0
  93. package/skills/check-reporting/references/checklists/COSMIN_RoB.md +136 -0
  94. package/skills/check-reporting/references/checklists/GRRAS.md +61 -0
  95. package/skills/check-reporting/references/checklists/MI_CLEAR_LLM.md +167 -0
  96. package/skills/check-reporting/references/checklists/MOOSE.md +85 -0
  97. package/skills/check-reporting/references/checklists/NOS.md +88 -0
  98. package/skills/check-reporting/references/checklists/PRISMA_2020.md +135 -0
  99. package/skills/check-reporting/references/checklists/PRISMA_DTA.md +36 -0
  100. package/skills/check-reporting/references/checklists/PRISMA_P.md +56 -0
  101. package/skills/check-reporting/references/checklists/PROBAST.md +75 -0
  102. package/skills/check-reporting/references/checklists/PROBAST_AI.md +130 -0
  103. package/skills/check-reporting/references/checklists/QUADAS2.md +77 -0
  104. package/skills/check-reporting/references/checklists/QUADAS_C.md +131 -0
  105. package/skills/check-reporting/references/checklists/ROBINS_E.md +179 -0
  106. package/skills/check-reporting/references/checklists/ROBINS_I.md +87 -0
  107. package/skills/check-reporting/references/checklists/ROBIS.md +114 -0
  108. package/skills/check-reporting/references/checklists/ROB_ME.md +126 -0
  109. package/skills/check-reporting/references/checklists/RoB2.md +79 -0
  110. package/skills/check-reporting/references/checklists/RoB_NMA.md +96 -0
  111. package/skills/check-reporting/references/checklists/SPIRIT.md +112 -0
  112. package/skills/check-reporting/references/checklists/SQUIRE_2.md +68 -0
  113. package/skills/check-reporting/references/checklists/STARD.md +129 -0
  114. package/skills/check-reporting/references/checklists/STARD_AI.md +211 -0
  115. package/skills/check-reporting/references/checklists/STROBE.md +80 -0
  116. package/skills/check-reporting/references/checklists/SWiM.md +33 -0
  117. package/skills/check-reporting/references/checklists/TRIPOD.md +157 -0
  118. package/skills/check-reporting/references/checklists/TRIPOD_AI.md +140 -0
  119. package/skills/check-reporting/references/step4c_registration_timing.md +93 -0
  120. package/skills/check-reporting/references/step4d_prisma_figure_audit.md +137 -0
  121. package/skills/check-reporting/scripts/check_checklist_exists.py +183 -0
  122. package/skills/check-reporting/scripts/check_checklist_version.py +168 -0
  123. package/skills/check-reporting/scripts/check_framework_naming.py +206 -0
  124. package/skills/check-reporting/scripts/check_prisma_figure.py +209 -0
  125. package/skills/check-reporting/scripts/prisma_cascade_check.py +274 -0
  126. package/skills/check-reporting/skill.yml +41 -0
  127. package/skills/check-reporting/tests/fixtures/framework_bad.md +8 -0
  128. package/skills/check-reporting/tests/fixtures/framework_clean.md +7 -0
  129. package/skills/check-reporting/tests/test_checklist_fail_fast.sh +77 -0
  130. package/skills/check-reporting/tests/test_checklist_version.sh +72 -0
  131. package/skills/check-reporting/tests/test_framework_naming.sh +45 -0
  132. package/skills/check-reporting/tests/test_prisma_cascade.sh +104 -0
  133. package/skills/clean-data/SKILL.md +180 -0
  134. package/skills/clean-data/references/cleaning_patterns.md +299 -0
  135. package/skills/clean-data/references/profiling_template.py +304 -0
  136. package/skills/clean-data/scripts/check_structural_zero.py +174 -0
  137. package/skills/clean-data/skill.yml +35 -0
  138. package/skills/clean-data/tests/fixtures/smoking.csv +8 -0
  139. package/skills/clean-data/tests/test_structural_zero.sh +49 -0
  140. package/skills/cross-national/SKILL.md +264 -0
  141. package/skills/cross-national/skill.yml +37 -0
  142. package/skills/define-variables/SKILL.md +146 -0
  143. package/skills/define-variables/references/common_definitions.md +190 -0
  144. package/skills/define-variables/skill.yml +34 -0
  145. package/skills/define-variables/templates/variable_operationalization.md +64 -0
  146. package/skills/deidentify/SKILL.md +203 -0
  147. package/skills/deidentify/deidentify.py +1224 -0
  148. package/skills/deidentify/locales/_template.json +45 -0
  149. package/skills/deidentify/locales/au.json +43 -0
  150. package/skills/deidentify/locales/ca.json +44 -0
  151. package/skills/deidentify/locales/cn.json +47 -0
  152. package/skills/deidentify/locales/de.json +48 -0
  153. package/skills/deidentify/locales/fr.json +48 -0
  154. package/skills/deidentify/locales/in.json +48 -0
  155. package/skills/deidentify/locales/jp.json +48 -0
  156. package/skills/deidentify/locales/kr.json +48 -0
  157. package/skills/deidentify/locales/uk.json +45 -0
  158. package/skills/deidentify/locales/us.json +43 -0
  159. package/skills/deidentify/references/date_shift_guide.md +82 -0
  160. package/skills/deidentify/references/hipaa_18_identifiers.md +48 -0
  161. package/skills/deidentify/references/korean_phi_patterns.md +135 -0
  162. package/skills/deidentify/skill.yml +43 -0
  163. package/skills/deidentify/tests/README.md +26 -0
  164. package/skills/deidentify/tests/test_clean.csv +16 -0
  165. package/skills/deidentify/tests/test_edge_cases.csv +11 -0
  166. package/skills/deidentify/tests/test_phi_korean.csv +11 -0
  167. package/skills/design-ai-benchmarking/SKILL.md +214 -0
  168. package/skills/design-ai-benchmarking/references/benchmark_export_schema.json +69 -0
  169. package/skills/design-ai-benchmarking/references/elicitation_rubric_template.md +37 -0
  170. package/skills/design-ai-benchmarking/skill.yml +38 -0
  171. package/skills/design-study/SKILL.md +298 -0
  172. package/skills/design-study/skill.yml +33 -0
  173. package/skills/fill-icmje-coi/SKILL.md +216 -0
  174. package/skills/fill-icmje-coi/scripts/fill_icmje_coi.py +140 -0
  175. package/skills/fill-icmje-coi/skill.yml +35 -0
  176. package/skills/fill-icmje-coi/templates/icmje_coi_seed_synthetic.docx +0 -0
  177. package/skills/fill-protocol/SKILL.md +248 -0
  178. package/skills/fill-protocol/examples/example_irb_template.yaml +53 -0
  179. package/skills/fill-protocol/references/best_practices.md +121 -0
  180. package/skills/fill-protocol/scripts/doc_to_docx.py +111 -0
  181. package/skills/fill-protocol/scripts/fill_form.py +611 -0
  182. package/skills/fill-protocol/scripts/inspect_template.py +61 -0
  183. package/skills/fill-protocol/setup.sh +162 -0
  184. package/skills/fill-protocol/skill.yml +37 -0
  185. package/skills/find-cohort-gap/SKILL.md +309 -0
  186. package/skills/find-cohort-gap/references/cohort_profile_template.md +93 -0
  187. package/skills/find-cohort-gap/references/onepager_template.md +84 -0
  188. package/skills/find-cohort-gap/references/pattern_scoring_rubric.md +169 -0
  189. package/skills/find-cohort-gap/references/saturation_query_templates.md +143 -0
  190. package/skills/find-cohort-gap/skill.yml +35 -0
  191. package/skills/find-journal/POLICY.md +87 -0
  192. package/skills/find-journal/SKILL.md +340 -0
  193. package/skills/find-journal/references/journal_profiles/AJNR.md +29 -0
  194. package/skills/find-journal/references/journal_profiles/AJR.md +30 -0
  195. package/skills/find-journal/references/journal_profiles/Abdominal_Radiology.md +30 -0
  196. package/skills/find-journal/references/journal_profiles/Academic_Radiology.md +30 -0
  197. package/skills/find-journal/references/journal_profiles/Annals_of_Internal_Medicine.md +33 -0
  198. package/skills/find-journal/references/journal_profiles/Artificial_Intelligence_in_Medicine.md +28 -0
  199. package/skills/find-journal/references/journal_profiles/BMC_Medicine.md +31 -0
  200. package/skills/find-journal/references/journal_profiles/British_Journal_of_Radiology.md +39 -0
  201. package/skills/find-journal/references/journal_profiles/CVIR.md +30 -0
  202. package/skills/find-journal/references/journal_profiles/Chest.md +39 -0
  203. package/skills/find-journal/references/journal_profiles/Clinical_Radiology.md +30 -0
  204. package/skills/find-journal/references/journal_profiles/Clinical_and_Molecular_Hepatology.md +32 -0
  205. package/skills/find-journal/references/journal_profiles/Diabetes_Metabolism_Journal.md +36 -0
  206. package/skills/find-journal/references/journal_profiles/Diagnostic_and_Interventional_Radiology.md +32 -0
  207. package/skills/find-journal/references/journal_profiles/Endocrinology_and_Metabolism.md +37 -0
  208. package/skills/find-journal/references/journal_profiles/European_Journal_of_Preventive_Cardiology.md +39 -0
  209. package/skills/find-journal/references/journal_profiles/European_Radiology.md +29 -0
  210. package/skills/find-journal/references/journal_profiles/Hepatology_Communications.md +40 -0
  211. package/skills/find-journal/references/journal_profiles/Hepatology_International.md +37 -0
  212. package/skills/find-journal/references/journal_profiles/IEEE_JBHI.md +28 -0
  213. package/skills/find-journal/references/journal_profiles/IEEE_TMI.md +28 -0
  214. package/skills/find-journal/references/journal_profiles/INSI.md +29 -0
  215. package/skills/find-journal/references/journal_profiles/Investigative_Radiology.md +25 -0
  216. package/skills/find-journal/references/journal_profiles/JACC_Advances.md +41 -0
  217. package/skills/find-journal/references/journal_profiles/JACC_Asia.md +30 -0
  218. package/skills/find-journal/references/journal_profiles/JACR.md +28 -0
  219. package/skills/find-journal/references/journal_profiles/JAMA.md +40 -0
  220. package/skills/find-journal/references/journal_profiles/JAMA_Network_Open.md +30 -0
  221. package/skills/find-journal/references/journal_profiles/JCSM.md +39 -0
  222. package/skills/find-journal/references/journal_profiles/JKMS.md +32 -0
  223. package/skills/find-journal/references/journal_profiles/JMIR.md +29 -0
  224. package/skills/find-journal/references/journal_profiles/JMIR_Medical_Education.md +29 -0
  225. package/skills/find-journal/references/journal_profiles/JNIS.md +35 -0
  226. package/skills/find-journal/references/journal_profiles/JVIR.md +31 -0
  227. package/skills/find-journal/references/journal_profiles/Journal_of_Biomedical_Informatics.md +29 -0
  228. package/skills/find-journal/references/journal_profiles/Journal_of_Clinical_Endocrinology_and_Metabolism.md +40 -0
  229. package/skills/find-journal/references/journal_profiles/Journal_of_Magnetic_Resonance_Imaging.md +30 -0
  230. package/skills/find-journal/references/journal_profiles/Journal_of_Nuclear_Medicine.md +31 -0
  231. package/skills/find-journal/references/journal_profiles/Journal_of_Stroke.md +32 -0
  232. package/skills/find-journal/references/journal_profiles/KJR.md +38 -0
  233. package/skills/find-journal/references/journal_profiles/Korean_Circulation_Journal.md +38 -0
  234. package/skills/find-journal/references/journal_profiles/Korean_Journal_of_Internal_Medicine.md +36 -0
  235. package/skills/find-journal/references/journal_profiles/Lancet_Diabetes_and_Endocrinology.md +40 -0
  236. package/skills/find-journal/references/journal_profiles/Lancet_Gastroenterology_and_Hepatology.md +49 -0
  237. package/skills/find-journal/references/journal_profiles/Lancet_Infectious_Diseases.md +38 -0
  238. package/skills/find-journal/references/journal_profiles/Lancet_Neurology.md +39 -0
  239. package/skills/find-journal/references/journal_profiles/Lancet_Oncology.md +40 -0
  240. package/skills/find-journal/references/journal_profiles/Lancet_Psychiatry.md +38 -0
  241. package/skills/find-journal/references/journal_profiles/Lancet_Public_Health.md +30 -0
  242. package/skills/find-journal/references/journal_profiles/Lancet_Respiratory_Medicine.md +39 -0
  243. package/skills/find-journal/references/journal_profiles/Liver_International.md +33 -0
  244. package/skills/find-journal/references/journal_profiles/Medical_Image_Analysis.md +28 -0
  245. package/skills/find-journal/references/journal_profiles/NEJM.md +33 -0
  246. package/skills/find-journal/references/journal_profiles/Nature_Machine_Intelligence.md +31 -0
  247. package/skills/find-journal/references/journal_profiles/Nature_Medicine.md +39 -0
  248. package/skills/find-journal/references/journal_profiles/Neuroradiology.md +31 -0
  249. package/skills/find-journal/references/journal_profiles/Nutrition_Metabolism_and_Cardiovascular_Diseases.md +39 -0
  250. package/skills/find-journal/references/journal_profiles/PLOS_Medicine.md +32 -0
  251. package/skills/find-journal/references/journal_profiles/RYAI.md +28 -0
  252. package/skills/find-journal/references/journal_profiles/Radiology.md +29 -0
  253. package/skills/find-journal/references/journal_profiles/Skeletal_Radiology.md +31 -0
  254. package/skills/find-journal/references/journal_profiles/Stroke.md +37 -0
  255. package/skills/find-journal/references/journal_profiles/The_BMJ.md +31 -0
  256. package/skills/find-journal/references/journal_profiles/The_Lancet.md +31 -0
  257. package/skills/find-journal/references/journal_profiles/The_Lancet_Digital_Health.md +29 -0
  258. package/skills/find-journal/references/journal_profiles/World_Journal_of_Hepatology.md +53 -0
  259. package/skills/find-journal/references/journal_profiles/npj_Digital_Medicine.md +29 -0
  260. package/skills/find-journal/skill.yml +34 -0
  261. package/skills/fulltext-retrieval/SKILL.md +174 -0
  262. package/skills/fulltext-retrieval/fetch_oa.py +433 -0
  263. package/skills/fulltext-retrieval/pdf_to_md.py +160 -0
  264. package/skills/fulltext-retrieval/skill.yml +41 -0
  265. package/skills/generate-codebook/SKILL.md +155 -0
  266. package/skills/generate-codebook/references/codebook_schema.md +76 -0
  267. package/skills/generate-codebook/scripts/generate_codebook.py +278 -0
  268. package/skills/generate-codebook/skill.yml +35 -0
  269. package/skills/generate-codebook/tests/test_generate_codebook.sh +76 -0
  270. package/skills/grant-builder/SKILL.md +251 -0
  271. package/skills/grant-builder/skill.yml +34 -0
  272. package/skills/humanize/SKILL.md +251 -0
  273. package/skills/humanize/references/ai_patterns.md +571 -0
  274. package/skills/humanize/skill.yml +33 -0
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1
+ # Journal Profile: NEJM
2
+
3
+ ## Journal Identity
4
+
5
+ - **Full name**: The New England Journal of Medicine
6
+ - **Abbreviation**: NEJM, N Engl J Med
7
+ - **Publisher**: Massachusetts Medical Society
8
+ - **ISSN**: 0028-4793 (print), 1533-4406 (online)
9
+ - **Frequency**: Weekly (52 issues/year)
10
+ - **Impact Factor**: ~176 (JCR 2023), ranked 1st among general medical journals
11
+ - **Open Access**: Hybrid (selected articles OA; most subscription-based)
12
+ - **Acceptance rate**: ~5% for Original Articles
13
+ - **Peer review**: Single-blind; dedicated statistical review for all manuscripts
14
+
15
+ ## Manuscript Types and Word Limits
16
+
17
+ | Type | Body Word Limit | Abstract | References | Figures/Tables |
18
+ |------|----------------|----------|------------|----------------|
19
+ | Original Article | 2700 words | 250 words (structured) | 40 | 4 |
20
+ | Special Article | 2700 words | 250 words (unstructured) | 40 | 4 |
21
+ | Review Article | 3500 words | 250 words (unstructured) | 100 | 5 |
22
+ | Case Records (MGH) | Commissioned | N/A | 30 | 6 |
23
+ | Clinical Practice | Commissioned | None | 40 | 3 |
24
+ | Brief Report | 1500 words | 150 words | 15 | 2 |
25
+ | Correspondence | 175 words | None | 5 | 1 |
26
+
27
+ Word counts exclude abstract, references, tables, and figure legends.
28
+
29
+ ---
30
+
31
+ ## Abstract Requirements
32
+
33
+ **Structured abstract, 250 words maximum (Original Articles):**
34
+
35
+ ```
36
+ Background: [Context and knowledge gap — why this study was needed]
37
+ Methods: [Study design, setting, participants, interventions, primary outcome]
38
+ Results: [Key findings with numerical results, effect sizes, CIs, P values]
39
+ Conclusions: [Main conclusion — 1-2 sentences directly answering the question]
40
+ ```
41
+
42
+ **Critical**: NEJM uses a 4-heading structured abstract (Background, Methods, Results, Conclusions). The abstract must stand alone as a complete summary. ClinicalTrials.gov registration number required at end of abstract for trials.
43
+
44
+ ---
45
+
46
+ ## Required Sections (Original Article)
47
+
48
+ 1. **Introduction** — brief (2-3 short paragraphs); state the gap and end with the study objective
49
+ 2. **Methods**
50
+ - Ethics: IRB/ethics committee approval statement
51
+ - Study design and oversight: registration number, funding source, role of funder
52
+ - Participants: eligibility criteria, enrollment dates
53
+ - Interventions or exposures
54
+ - Outcomes: primary endpoint clearly stated
55
+ - Statistical analysis: prespecified plan, sample size rationale
56
+ 3. **Results** — begin with enrollment/demographics; report primary endpoint first
57
+ 4. **Discussion** — concise (4 paragraphs max); start with key findings, address limitations explicitly
58
+
59
+ **Note**: NEJM does not use a separate "Conclusions" heading in the body. The final paragraph of Discussion serves as the conclusion.
60
+
61
+ ---
62
+
63
+ ## Statistical Reporting
64
+
65
+ NEJM has exceptionally rigorous statistical standards:
66
+ - Report exact P values (two-sided) to 2 decimal places; use P < 0.001 below that threshold.
67
+ - 95% CI mandatory for primary and key secondary outcomes.
68
+ - Hazard ratios, odds ratios, relative risks with CIs.
69
+ - Absolute risk differences and number needed to treat (NNT) for clinical trials.
70
+ - Sample size calculation with assumptions (power, alpha, expected effect size, dropout rate).
71
+ - Pre-specified primary outcome; secondary outcomes clearly labeled.
72
+ - Interim analyses and stopping rules described.
73
+ - For non-inferiority trials: margin justification required.
74
+ - Subgroup analyses: pre-specified; present with forest plot and interaction P values.
75
+ - Missing data handling explicitly described (multiple imputation preferred).
76
+ - Statistical software and version stated in Methods.
77
+
78
+ ---
79
+
80
+ ## Figures
81
+
82
+ - **Maximum 4 figures/tables combined** — extremely limited; plan carefully
83
+ - **Resolution**: 300 DPI minimum
84
+ - **Format**: EPS, TIFF, or PDF for figures; editable (Word) for tables
85
+ - **Color**: Free online; authors may be charged for print color
86
+ - **Supplementary Appendix**: Unlimited eFigures, eTables, eMethods; published online-only
87
+ - **CONSORT/study flow**: counts as one figure
88
+ - **Figure quality**: Professional quality expected; NEJM may redraw accepted figures
89
+
90
+ ---
91
+
92
+ ## Common Rejection Reasons
93
+
94
+ 1. **Insufficient sample size or clinical impact** — NEJM expects large, definitive trials (typically N > 1000) or landmark observational studies
95
+ 2. **Narrow specialty focus** — must have broad relevance to general medical practice
96
+ 3. **Incremental findings** — results must be practice-changing, not confirmatory
97
+ 4. **Methodological concerns** — inadequate randomization, high dropout, or missing pre-registration for trials
98
+ 5. **Overclaiming** — causal language in observational studies; overgeneralization
99
+ 6. **Word count violations** — NEJM has among the strictest limits (2700 words); excess length is immediate concern
100
+
101
+ ---
102
+
103
+ ## Cover Letter
104
+
105
+ Must include:
106
+ - Brief statement of what the study adds (1-2 sentences)
107
+ - Confirmation of exclusivity (not under consideration elsewhere)
108
+ - Trial registration number (if applicable)
109
+ - Disclosure of related published or submitted manuscripts
110
+ - Suggested reviewers (optional)
111
+ - Any potential conflicts of interest
112
+
113
+ ---
114
+
115
+ ## AI Writing Disclosure Policy
116
+ - **Requirement level:** Required
117
+ - **Permitted scope:** Language editing only — AI/LLM tools may be used for grammar and language editing; AI cannot generate scientific content, interpret data, or draw conclusions; AI tools cannot be listed as authors
118
+ - **Disclosure location:** Methods — describe the AI tool name, version, and how it was used
119
+ - **AI-generated images:** Not permitted — AI-generated clinical images, pathology, or radiology images are not allowed
120
+ - **Policy URL:** https://www.nejm.org/author-center/new-manuscripts
121
+
122
+ ---
123
+
124
+ ## Author Guidelines URL
125
+
126
+ https://www.nejm.org/author-center/new-manuscripts
127
+
128
+ ---
129
+
130
+ ## Positioning
131
+
132
+ | Feature | NEJM | The Lancet | JAMA |
133
+ |---------|------|-----------|------|
134
+ | IF | ~176 | ~169 | ~120 |
135
+ | Abstract style | 4-heading structured | Unstructured (300 words) | 7-heading structured |
136
+ | Word limit (Original) | 2700 | 3500 | 3000 |
137
+ | OA model | Hybrid | Hybrid | Hybrid |
138
+ | Unique feature | Strictest word limit, clinical focus | Global health strength | Key Points box |
139
+ | AI/radiology | Rare, only practice-changing | Occasional | Via JAMA Network |
140
+
141
+ NEJM is appropriate when:
142
+ - Large RCT with unambiguous clinical endpoint (mortality, major morbidity)
143
+ - Practice-changing finding with immediate impact on patient care
144
+ - Landmark epidemiological study with public health implications
145
+ - Novel therapeutic approved or likely to change guidelines
146
+
147
+ Not appropriate for: small studies, technical methodology papers, AI without clinical validation, narrow subspecialty findings, pilot/exploratory studies.
@@ -0,0 +1,181 @@
1
+ # Journal Profile: Nature Medicine
2
+
3
+ ## Journal Identity
4
+
5
+ - **Full name**: Nature Medicine
6
+ - **Abbreviation**: Nat Med
7
+ - **Publisher**: Springer Nature
8
+ - **ISSN**: 1078-8956 (print), 1546-170X (online)
9
+ - **Frequency**: Monthly (12 issues/year)
10
+ - **Impact Factor**: ~82 (JCR 2023), top-ranked translational medicine journal
11
+ - **Open Access**: Hybrid (transformative agreements may cover OA at many institutions)
12
+ - **Acceptance rate**: ~8% for Articles
13
+ - **Peer review**: Single-blind; in-house editors with PhD/MD backgrounds handle triage
14
+
15
+ ## Manuscript Types and Word Limits
16
+
17
+ | Type | Body Word Limit | Abstract | References | Figures |
18
+ |------|----------------|----------|------------|---------|
19
+ | Article | No strict limit (typically 3000-5000) | 150 words (unstructured) | 50 | 8 |
20
+ | Brief Communication | 1500 words | 3 sentences (unstructured) | 20 | 4 |
21
+ | Review | No strict limit | 150 words | No limit | No limit |
22
+ | Analysis | 3000 words | 150 words | 50 | 6 |
23
+ | Correspondence | 500 words | None | 10 | 1 |
24
+ | Resource | No strict limit | 150 words | 50 | 8 |
25
+
26
+ Word counts include Methods summary in main text. Detailed Methods go in Online Methods.
27
+
28
+ ---
29
+
30
+ ## Abstract Requirements
31
+
32
+ **Unstructured abstract, 150 words maximum:**
33
+
34
+ A single paragraph, no headings. Must include:
35
+ - Study rationale (1 sentence)
36
+ - What was done (design, N, key method)
37
+ - Main findings (primary result with effect size)
38
+ - Significance (1 sentence: why this matters)
39
+
40
+ **Critical**: Nature Medicine abstracts are very short (150 words). Every word must count. No background preamble — start with the gap or objective.
41
+
42
+ ---
43
+
44
+ ## Required Journal-Specific Elements
45
+
46
+ ### 1. Online Methods
47
+
48
+ Detailed methods go in the Online Methods section (separate from main text). This section has no word limit and should include:
49
+ - Study design and participants
50
+ - Detailed protocols
51
+ - Statistical analysis
52
+ - Code availability
53
+ - Data availability
54
+
55
+ The main-text Methods summary is typically 1-2 paragraphs referencing the Online Methods.
56
+
57
+ ### 2. Reporting Summary
58
+
59
+ Nature Research Reporting Summary required at submission. Covers:
60
+ - Study design, statistical methods, data availability
61
+ - Life sciences: ethics, clinical trial registration
62
+ - Software and code availability
63
+
64
+ ### 3. Data Availability Statement
65
+
66
+ Mandatory. Must specify: what data, where deposited, accession codes, access conditions.
67
+
68
+ ### 4. Code Availability Statement
69
+
70
+ Mandatory if computational methods are used. Must specify: repository URL, version, DOI.
71
+
72
+ ---
73
+
74
+ ## Required Sections (Article)
75
+
76
+ 1. **Introduction** — 2-3 paragraphs; concise, end with study aims
77
+ 2. **Results** — presented first (before Methods in main text); subheadings encouraged
78
+ 3. **Discussion** — 3-4 paragraphs; limitations discussed within
79
+ 4. **Methods** (summary in main text) — brief overview referencing Online Methods
80
+ 5. **Online Methods** — full methodological detail (no word limit)
81
+ 6. **References**
82
+ 7. **Acknowledgements**
83
+ 8. **Author Contributions** — specific per-author contributions
84
+ 9. **Competing Interests** — or "The authors declare no competing interests"
85
+ 10. **Extended Data** — up to 10 figures/tables, peer-reviewed (unlike Supplementary)
86
+
87
+ **Note**: Nature Medicine uses Results-before-Methods order in the main text.
88
+
89
+ ---
90
+
91
+ ## Statistical Reporting
92
+
93
+ Nature Medicine follows Nature Research statistical guidelines:
94
+ - Report exact P values where possible; state as P < 0.001 if below that threshold.
95
+ - 95% CI for all primary outcomes.
96
+ - Effect sizes required; do not report P values alone.
97
+ - For multiple comparisons: describe correction method (Bonferroni, FDR, etc.) or justify if none applied.
98
+ - Sample sizes and how they were determined must be stated (power analysis preferred).
99
+ - For each statistical test: state the test name, whether one-tailed or two-tailed, and the exact value of N.
100
+ - Data distribution: state whether normality was tested and which test was used.
101
+ - Box plots: define center line, box limits, whiskers, and individual data points shown.
102
+ - Source data for all figures must be provided.
103
+ - Statistical software and version must be identified in Methods.
104
+
105
+ ---
106
+
107
+ ## Figures
108
+
109
+ - **Maximum 8 figures** for Articles, 4 for Brief Communications
110
+ - **Extended Data**: up to 10 additional figures/tables (peer-reviewed, unlike Supplementary)
111
+ - **Supplementary Information**: unlimited (not peer-reviewed, for completeness)
112
+ - **Resolution**: 300 DPI (bitmap), vector preferred (PDF, EPS, AI)
113
+ - **Figure size**: single column (88 mm) or double column (180 mm)
114
+ - **Color**: free, no charges
115
+ - **Panels**: Label a, b, c (lowercase); scale bars required for microscopy/imaging
116
+ - **Source data**: Raw data for each figure must be provided as Source Data files
117
+
118
+ ---
119
+
120
+ ## Common Rejection Reasons
121
+
122
+ 1. **Insufficient translational impact** — Nature Medicine requires clear bridge from bench to bedside; pure methodology papers rejected
123
+ 2. **Lack of clinical validation** — AI/computational studies need clinical or at least large retrospective clinical cohort validation
124
+ 3. **Single-center without external validation** — multi-site strongly preferred
125
+ 4. **Abstract too long** — 150-word limit is strictly enforced
126
+ 5. **Methods in wrong location** — main text should have Results before Methods summary
127
+ 6. **Missing data/code availability** — mandatory for all computational studies
128
+ 7. **Overclaiming causation** — editors flag causal language in observational designs
129
+ 8. **Incremental advance** — must demonstrate substantial advance over existing methods/knowledge
130
+
131
+ ---
132
+
133
+ ## Cover Letter
134
+
135
+ Nature Medicine cover letters are read carefully by editors. Must include:
136
+ - Why this study is important for Nature Medicine's readership (translational impact)
137
+ - Key finding in 1-2 sentences
138
+ - Why the study is timely
139
+ - Statement of originality (not published/submitted elsewhere)
140
+ - Suggested reviewers (3-5, with brief justification for each)
141
+ - Opposed reviewers (optional)
142
+
143
+ ---
144
+
145
+ ## Author Guidelines URL
146
+
147
+ https://www.nature.com/nm/submission-guidelines
148
+
149
+ ---
150
+
151
+ ## Positioning
152
+
153
+ Nature Medicine is appropriate when:
154
+ - AI/ML study with clinical validation on large, diverse patient cohort
155
+ - Multi-center prospective study with clinical endpoint
156
+ - Novel biomarker or diagnostic with translational path
157
+ - First-in-human results for novel therapeutic approach
158
+ - Large-scale genomic/proteomic study with disease mechanism insight
159
+
160
+ Not appropriate for: pure technical methodology (use Nature Methods or Nature Machine Intelligence), small retrospective studies, incremental improvements to existing methods, studies without clinical relevance.
161
+
162
+ ---
163
+
164
+ ## Brief Communication vs Article
165
+
166
+ | Dimension | Article | Brief Communication |
167
+ |-----------|---------|-------------------|
168
+ | Scope | Full study, multiple analyses | Single key finding |
169
+ | Abstract | 150 words | 3 sentences |
170
+ | Body | ~3000-5000 words | 1500 words |
171
+ | Figures | 8 | 4 |
172
+ | Use when | Comprehensive study | Striking result, rapid publication |
173
+
174
+ ---
175
+
176
+ ## AI Writing Disclosure Policy
177
+ - **Requirement level:** Required
178
+ - **Permitted scope:** Language editing only — AI/LLM tools (e.g., ChatGPT, Claude) may assist with language, grammar, and readability but cannot be listed as authors; AI must not generate scientific content, interpret results, or draw conclusions; authors bear full responsibility for accuracy and integrity
179
+ - **Disclosure location:** Methods — describe the AI tool name, version, and how it was used in the Methods section; Nature Portfolio requires disclosure in the manuscript body, not just a cover letter; also captured in the Nature Research Reporting Summary
180
+ - **AI-generated images:** Banned — AI-generated images are not permitted in published figures; any image manipulation must follow Nature's image integrity policies; computational visualizations from AI research tools must be clearly labeled
181
+ - **Policy URL:** https://www.nature.com/nature-portfolio/editorial-policies/ai
@@ -0,0 +1,151 @@
1
+ # Journal Profile: Neuroradiology
2
+
3
+ ## Journal Identity
4
+
5
+ - **Full name**: Neuroradiology
6
+ - **Abbreviation**: Neuroradiology
7
+ - **Publisher**: Springer Nature (European Society of Neuroradiology, ESNR)
8
+ - **ISSN**: 0028-3940 (print), 1432-1920 (online)
9
+ - **Frequency**: Monthly (12 issues/year)
10
+ - **Impact Factor**: ~3.4 (JCR 2023)
11
+ - **Open Access**: Hybrid (Springer transformative agreements may cover OA)
12
+ - **Acceptance rate**: ~30%
13
+ - **Peer review**: Single-blind; typically 2 reviewers
14
+
15
+ ## Manuscript Types and Word Limits
16
+
17
+ | Type | Body Word Limit | Abstract | References | Figures/Tables |
18
+ |------|----------------|----------|------------|----------------|
19
+ | Original Article | 3500 words | 250 words (structured) | 35 | 6 |
20
+ | Review Article | 5000 words | 250 words | 60 | 8 |
21
+ | Technical Note | 2000 words | 150 words (unstructured) | 15 | 4 |
22
+ | Diagnostic Neuroradiology | 1500 words | 150 words | 10 | 6 |
23
+ | Interventional Neuroradiology | 3000 words | 250 words (structured) | 30 | 6 |
24
+ | Letter to the Editor | 500 words | None | 5 | 1 |
25
+ | Pictorial Review | 3000 words | 200 words | 20 | 12 |
26
+
27
+ Word counts exclude abstract, references, tables, and figure legends.
28
+
29
+ ---
30
+
31
+ ## Abstract Requirements
32
+
33
+ **Structured abstract for Original Articles and Interventional, 250 words maximum:**
34
+
35
+ ```
36
+ Purpose: [Study aim — 1-2 sentences]
37
+ Methods: [Design, population, imaging protocol, analysis]
38
+ Results: [Key findings with statistics]
39
+ Conclusion: [Main conclusion — 1-2 sentences]
40
+ ```
41
+
42
+ **Unstructured abstract for Technical Notes and Diagnostic Neuroradiology, 150 words.**
43
+
44
+ ---
45
+
46
+ ## Required Sections (Original Article)
47
+
48
+ 1. **Introduction** — clinical context, gap, purpose (2-3 paragraphs)
49
+ 2. **Methods** (Springer uses "Methods" not "Materials and Methods")
50
+ - Study Design: IRB approval, retrospective/prospective
51
+ - Patient Population: inclusion/exclusion, time period
52
+ - Imaging Protocol: scanner model, sequence parameters (critical for neuroradiology)
53
+ - Image Analysis: readers, blinding, measurement methods
54
+ - Statistical Analysis: software, tests
55
+ 3. **Results** — demographics, imaging findings, quantitative results
56
+ 4. **Discussion** — comparison with literature, pathophysiological implications, limitations
57
+ 5. **Conclusion** — brief (1-2 sentences)
58
+
59
+ ---
60
+
61
+ ## Statistical Reporting
62
+
63
+ - Report exact p-values; use p < 0.001 below that threshold.
64
+ - 95% CI for primary outcomes.
65
+ - For diagnostic accuracy: sensitivity, specificity, AUC with 95% CI.
66
+ - Inter-reader agreement: ICC with model/type specification, or kappa with weighting scheme.
67
+ - For volumetric measurements: Bland-Altman analysis with limits of agreement.
68
+ - Multiple comparisons: Bonferroni or false discovery rate correction.
69
+ - Statistical software and version must be identified.
70
+
71
+ ---
72
+
73
+ ## Neuroradiology-Specific Requirements
74
+
75
+ ### Imaging Protocol Detail
76
+
77
+ Neuroradiology expects detailed MRI/CT protocol reporting:
78
+ - Scanner manufacturer, model, field strength
79
+ - Sequence names and key parameters (TR, TE, flip angle, slice thickness, matrix, FOV)
80
+ - Contrast agent: name, dose, injection rate, delay
81
+ - Post-processing: software, version, reconstruction parameters
82
+
83
+ ### Anatomy and Pathology Terminology
84
+
85
+ Use standardized neuroradiology terminology:
86
+ - Stroke: use ASPECTS, mRS, NIHSS
87
+ - Tumors: WHO classification with molecular markers
88
+ - Vascular: use standard aneurysm measurement conventions
89
+ - Spine: use standard nomenclature for disc herniation (protrusion, extrusion, sequestration)
90
+
91
+ ---
92
+
93
+ ## Figures
94
+
95
+ - **Maximum 6 figures/tables** for original articles; **12 for Pictorial Reviews**
96
+ - **Resolution**: 300 DPI minimum
97
+ - **Format**: TIFF, EPS, JPEG (high quality)
98
+ - **Color**: Free online; Springer handles conversion
99
+ - **Neuroimaging conventions**: window/level should match clinical display; annotations with arrows/arrowheads; anatomical orientation labeled
100
+
101
+ ---
102
+
103
+ ## Common Rejection Reasons
104
+
105
+ 1. **Insufficient imaging protocol detail** — neuroradiology readers expect MRI sequence-level specificity
106
+ 2. **Small single-center retrospective** without novelty — Neuroradiology accepts more readily than AJNR but still needs contribution
107
+ 3. **Missing inter-reader agreement** — for studies with subjective measurements
108
+ 4. **Overlapping scope with AJNR** — if the study has a stronger North American angle, consider AJNR first
109
+ 5. **Diagnostic Neuroradiology cases** too common — must be genuinely educational or rare
110
+
111
+ ---
112
+
113
+ ## Cover Letter
114
+
115
+ Should include:
116
+ - Relevance to European neuroradiology practice
117
+ - Brief summary of key findings
118
+ - Statement of originality
119
+ - Suggested reviewers with neuroradiology expertise
120
+
121
+ ---
122
+
123
+ ## Author Guidelines URL
124
+
125
+ https://www.springer.com/journal/234/submission-guidelines
126
+
127
+ ---
128
+
129
+ ## Positioning
130
+
131
+ Neuroradiology is appropriate when:
132
+ - Brain, spine, or head/neck imaging study with clinical relevance
133
+ - AI applied to neuroimaging with diagnostic validation
134
+ - Interventional neuroradiology outcome study (thrombectomy, embolization, stenting)
135
+ - Advanced imaging technique (perfusion, diffusion, spectroscopy) in neurological disease
136
+ - Pictorial reviews of neuroradiology topics
137
+
138
+ Not appropriate for: body imaging, non-neurological applications, pure methodology without neuroimaging data.
139
+
140
+ ---
141
+
142
+ ## Differentiation from AJNR
143
+
144
+ | Dimension | Neuroradiology | AJNR |
145
+ |-----------|---------------|------|
146
+ | Society | ESNR (European) | ASNR (American) |
147
+ | Impact factor | ~3.4 | ~3.5 |
148
+ | Scope | Diagnostic + interventional neuro | Diagnostic + interventional + spine |
149
+ | Geography | European/international | North American/international |
150
+ | Case reports | "Diagnostic Neuroradiology" category | "Case Report" (limited acceptance) |
151
+ | Pictorial reviews | Accepted (up to 12 figures) | Less common format |
@@ -0,0 +1,184 @@
1
+ # Journal Profile: Nutrition, Metabolism and Cardiovascular Diseases (NMCD)
2
+
3
+ ## Journal Identity
4
+
5
+ - **Full name**: Nutrition, Metabolism and Cardiovascular Diseases
6
+ - **Abbreviation**: Nutr Metab Cardiovasc Dis
7
+ - **Publisher**: Elsevier
8
+ - **ISSN**: 0939-4753 (print) / 1590-3729 (online)
9
+ - **Frequency**: Monthly
10
+ - **Impact Factor**: ~3.9 (recent JCR; verify at submission)
11
+ - **Open Access**: Hybrid — APC USD 3,560 for gold open access; subscription model available
12
+ - **Peer review**: Single-blind; statistical review where methodology is heavy
13
+
14
+ ## Manuscript Types and Word Limits
15
+
16
+ | Type | Body Word Limit | Abstract | References | Figures/Tables |
17
+ |------|----------------|----------|------------|----------------|
18
+ | Original Article | 4,000 words | 250 (structured) | 60 max | 6 max |
19
+ | Systematic Review / Meta-analysis | 6,000 words | 250 (structured) | 120 max | 8 max |
20
+ | Viewpoint / Short Review | 3,000 words | 200 (unstructured) | 50 max | 4 max |
21
+ | Institutional Review | as Original | as Original | as Original | as Original |
22
+ | Short Communication | 1,500 words | 200 | 20 max | 2 max |
23
+ | Letter to the Editor | 800 words | none | 10 max | 1 max |
24
+
25
+ Word counts exclude abstract, references, tables, and figure legends.
26
+
27
+ ---
28
+
29
+ ## Abstract Requirements
30
+
31
+ **Structured abstract for Original Article, 250 words maximum, with 3 headings:**
32
+
33
+ ```
34
+ Background and Aims: [Context + specific research question or hypothesis]
35
+ Methods and Results: [Design, setting, population, exposures, outcomes, statistical approach + primary results with effect sizes, 95% CIs, P values]
36
+ Conclusion: [Direct answer to Aims with clinical or public-health implication]
37
+ ```
38
+
39
+ The merged "Methods and Results" heading is a NMCD-specific stylistic choice. Reviewers and the editorial system check this heading exactly.
40
+
41
+ ---
42
+
43
+ ## Required Journal-Specific Elements
44
+
45
+ ### 1. Graphical Abstract (optional)
46
+
47
+ Encouraged for Original Articles and Meta-analyses; uploaded as a separate file at submission.
48
+
49
+ ### 2. Article Information
50
+
51
+ - Author affiliations with department, institution, city, country
52
+ - Corresponding author full contact details
53
+ - Funding statement with grant identifiers
54
+ - Disclosures: per-author ICMJE conflicts of interest
55
+ - Data availability statement
56
+ - Ethical statement (IRB or equivalent + informed consent)
57
+
58
+ ---
59
+
60
+ ## Required Sections (Original Article)
61
+
62
+ 1. **Introduction** — 2–3 paragraphs ending with clear aims
63
+ 2. **Methods**
64
+ - Ethics approval with body name
65
+ - Study design and setting
66
+ - Participants and eligibility
67
+ - Variables / definitions (nutrition exposures and metabolic measures defined explicitly)
68
+ - Outcomes (primary, secondary, exploratory clearly distinguished)
69
+ - Statistical analysis with software and versions
70
+ 3. **Results** — STROBE/CONSORT flow; primary outcome before secondary
71
+ 4. **Discussion** — Strengths and Limitations sub-paragraphs; conclude with mechanistic and clinical/public-health implications
72
+ 5. **Conclusion** — brief; avoid overclaiming
73
+
74
+ ---
75
+
76
+ ## Statistical Reporting
77
+
78
+ - Exact P values to 3 decimal places (P < 0.001 below threshold)
79
+ - 95% CI for all primary effect estimates
80
+ - Effect sizes appropriate to design (HR, OR, mean difference, absolute risk difference)
81
+ - Proportional-hazards assumption check (Schoenfeld) when Cox is used
82
+ - For nutrition exposures: report measurement method (FFQ, 24h recall, weighed records) with validation reference
83
+ - For metabolic biomarkers: report assay, intra- and inter-assay CV, and calibration source
84
+ - Sensitivity analyses for major analytic choices (missing data, alternative cutpoints, exposure misclassification)
85
+ - Software and version reported
86
+
87
+ ---
88
+
89
+ ## Figures
90
+
91
+ - **Maximum 6 figures/tables combined** for Original Article
92
+ - Resolution: 300 DPI minimum
93
+ - Format: TIFF, EPS, PDF, or high-quality PNG
94
+ - Color: encouraged
95
+ - Supplementary material: online-only supplement permitted
96
+
97
+ ---
98
+
99
+ ## Common Rejection Reasons
100
+
101
+ 1. **Insufficient nutrition–metabolism–cardiovascular linkage** — manuscripts framed as pure cardiology or pure nutrition without the crossover axis are redirected
102
+ 2. **Single-center cohort without external comparison** — population-based or multicenter preferred
103
+ 3. **Missing measurement-method detail for nutrition exposures** — methodology bar is high for dietary assessment
104
+ 4. **Overclaiming on observational data** — wide-CI estimates without exploratory qualifier
105
+ 5. **Abstract heading mismatch** — using Background/Methods/Results/Conclusions instead of Background and Aims/Methods and Results/Conclusion
106
+ 6. **AI policy non-compliance** — undisclosed AI use or AI listed as author
107
+ 7. **Reference style violations** — failing to follow numbered citation order with first-6-then-et-al rule
108
+
109
+ ---
110
+
111
+ ## Cover Letter
112
+
113
+ Must include:
114
+ - Brief statement of novelty and the nutrition–metabolism–CVD crossover relevance
115
+ - Confirmation manuscript is not under consideration elsewhere
116
+ - Confirmation all authors meet ICMJE criteria
117
+ - Disclosure of related manuscripts (same cohort, same group)
118
+ - Suggested reviewers (3–5; senior PI curates)
119
+ - AI disclosure aligned with the in-manuscript declaration
120
+
121
+ ---
122
+
123
+ ## AI Writing Disclosure Policy
124
+
125
+ - **Requirement level**: Required
126
+ - **Disclosure template** (verbatim, immediately before references):
127
+ > "During the preparation of this work the author(s) used [NAME OF TOOL / SERVICE] in order to [REASON]. After using this tool/service, the author(s) reviewed and edited the content as needed and take(s) full responsibility for the content of the publication."
128
+ - **Permitted scope**: AI/LLM tools may be used for language editing, structural review, and consistency checks; AI cannot be listed as author
129
+ - **Disclosure location**: Dedicated declaration immediately before the references
130
+ - **AI-generated images**: Elsevier policy prohibits AI generation or alteration of images
131
+ - **Grammar/spell-check exception**: Basic grammar/spelling/punctuation tools need no declaration
132
+ - **Policy URL**: https://www.elsevier.com/about/policies-and-standards/the-use-of-generative-ai-and-ai-assisted-technologies-in-writing-for-elsevier
133
+
134
+ ---
135
+
136
+ ## Submission Portal
137
+
138
+ https://www.editorialmanager.com/nmcd
139
+
140
+ ---
141
+
142
+ ## Author Guidelines URL
143
+
144
+ https://www.sciencedirect.com/journal/nutrition-metabolism-and-cardiovascular-diseases/publish/guide-for-authors
145
+
146
+ ---
147
+
148
+ ## Positioning
149
+
150
+ | Criterion | NMCD | EJPC | JACC: Advances | Atherosclerosis |
151
+ |-----------|------|------|----------------|------------------|
152
+ | **Society** | independent (Elsevier) | ESC/EAPC | ACC | EAS-affiliated (Elsevier) |
153
+ | **Impact Factor** | ~3.9 | ~8 | not indexed yet | ~5 |
154
+ | **Open Access** | Hybrid | Hybrid | Full Gold OA | Hybrid |
155
+ | **Geographic stance** | International | Europe-centric | Global | International (Europe-centric) |
156
+ | **Primary framing** | Nutrition–metabolism–CVD crossover | Cardiovascular prevention | Cardiovascular broad | Atherosclerosis / lipid biology |
157
+ | **Abstract first heading** | Background and Aims | Aims | Background | Background and Aims |
158
+ | **Word cap (Original)** | 4,000 | 5,000 | 5,000 (incl. refs+legends) | varies |
159
+
160
+ **Choose NMCD when:**
161
+ - Nutrition exposure or metabolic intervention is integral to the exposure or interpretation
162
+ - Mediterranean diet, MASLD, metabolic syndrome, or insulin-resistance pathway is the central narrative
163
+ - Crossover audience (cardiology + nutrition + endocrinology) matters
164
+
165
+ **Choose EJPC instead when:**
166
+ - Primary prevention angle dominates over the nutrition crossover
167
+ - ESC ecosystem reach matters more than the Elsevier cardio-metabolic platform
168
+
169
+ **Choose JACC: Advances instead when:**
170
+ - AHA-aligned framework application (e.g., CKM staging) is the central methodological contribution
171
+ - ACC ecosystem and Full Gold OA matter
172
+
173
+ **Choose Atherosclerosis instead when:**
174
+ - Lipid or plaque biology is the dominant mechanistic axis
175
+ - The contribution is more about vascular biology than nutrition/metabolic clustering
176
+
177
+ ---
178
+
179
+ ## Verification
180
+
181
+ - **Source (compact harvest):** local private profile (2026-05-20 fetch from https://www.sciencedirect.com/journal/nutrition-metabolism-and-cardiovascular-diseases/publish/guide-for-authors)
182
+ - **Source (detail authored):** based on harvested compact + Elsevier publisher-level AI policy + NMCD-specific abstract heading verbatim
183
+ - **Date (promoted to public):** 2026-05-21
184
+ - **Notes:** Verify APC and IF directly on the journal site at submission. Word limits sourced from compact harvest.