medsci-skills 4.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (702) hide show
  1. package/LICENSE +50 -0
  2. package/README.md +602 -0
  3. package/README_FIRST.md +27 -0
  4. package/bin/medsci-skills.js +159 -0
  5. package/installers/install-macos.command +19 -0
  6. package/installers/install-windows.cmd +26 -0
  7. package/installers/install-windows.ps1 +17 -0
  8. package/installers/install.py +218 -0
  9. package/metadata/skills_catalog.json +452 -0
  10. package/package.json +48 -0
  11. package/skills/academic-aio/SKILL.md +408 -0
  12. package/skills/academic-aio/references/case_studies/kjr_mllm_2025.md +82 -0
  13. package/skills/academic-aio/references/checklists/AIO_GENERAL.md +354 -0
  14. package/skills/academic-aio/references/journal_summarybox_templates.yaml +126 -0
  15. package/skills/academic-aio/references/oac_funding_checklist.yaml +129 -0
  16. package/skills/academic-aio/references/reporting_guideline_mapping.md +39 -0
  17. package/skills/academic-aio/references/schema_markup_templates/CodeRepository.jsonld +32 -0
  18. package/skills/academic-aio/references/schema_markup_templates/Dataset.jsonld +36 -0
  19. package/skills/academic-aio/references/schema_markup_templates/Person.jsonld +30 -0
  20. package/skills/academic-aio/references/schema_markup_templates/README.md +43 -0
  21. package/skills/academic-aio/references/schema_markup_templates/ScholarlyArticle.jsonld +55 -0
  22. package/skills/academic-aio/scripts/batch_metadata_audit.py +169 -0
  23. package/skills/academic-aio/scripts/validate_schema.py +118 -0
  24. package/skills/academic-aio/skill.yml +36 -0
  25. package/skills/academic-aio/templates/aio_audit_checklist.md.j2 +108 -0
  26. package/skills/add-journal/SKILL.md +482 -0
  27. package/skills/add-journal/skill.yml +33 -0
  28. package/skills/analyze-stats/SKILL.md +598 -0
  29. package/skills/analyze-stats/references/analysis_guides/missing_data.md +109 -0
  30. package/skills/analyze-stats/references/analysis_guides/nhis_icd10_mapping.md +247 -0
  31. package/skills/analyze-stats/references/analysis_guides/propensity_score.md +132 -0
  32. package/skills/analyze-stats/references/analysis_guides/regression.md +115 -0
  33. package/skills/analyze-stats/references/analysis_guides/repeated_measures.md +160 -0
  34. package/skills/analyze-stats/references/analysis_guides/survey_weighted.md +366 -0
  35. package/skills/analyze-stats/references/analysis_guides/test_selection.md +86 -0
  36. package/skills/analyze-stats/references/style/figure_style.mplstyle +69 -0
  37. package/skills/analyze-stats/references/style/theme_publication.R +147 -0
  38. package/skills/analyze-stats/references/table-standards/journal-profiles/ajr.yaml +51 -0
  39. package/skills/analyze-stats/references/table-standards/journal-profiles/european_radiology.yaml +55 -0
  40. package/skills/analyze-stats/references/table-standards/journal-profiles/jama.yaml +66 -0
  41. package/skills/analyze-stats/references/table-standards/journal-profiles/lancet.yaml +57 -0
  42. package/skills/analyze-stats/references/table-standards/journal-profiles/nejm.yaml +51 -0
  43. package/skills/analyze-stats/references/table-standards/journal-profiles/radiology.yaml +66 -0
  44. package/skills/analyze-stats/references/table-standards/table-standards.md +287 -0
  45. package/skills/analyze-stats/references/table-standards/table-types/diagnostic_accuracy.md +36 -0
  46. package/skills/analyze-stats/references/table-standards/table-types/meta_analysis.md +58 -0
  47. package/skills/analyze-stats/references/table-standards/table-types/model_comparison.md +36 -0
  48. package/skills/analyze-stats/references/table-standards/table-types/regression_results.md +50 -0
  49. package/skills/analyze-stats/references/table-standards/table-types/table1_demographics.md +51 -0
  50. package/skills/analyze-stats/references/table-standards/tool-comparison.md +79 -0
  51. package/skills/analyze-stats/references/templates/agreement_analysis.py +436 -0
  52. package/skills/analyze-stats/references/templates/dca_plot.R +237 -0
  53. package/skills/analyze-stats/references/templates/diagnostic_accuracy.py +401 -0
  54. package/skills/analyze-stats/references/templates/dta_meta_analysis.R +384 -0
  55. package/skills/analyze-stats/references/templates/forest_plot.py +412 -0
  56. package/skills/analyze-stats/references/templates/likert_summary.py +356 -0
  57. package/skills/analyze-stats/references/templates/meta_analysis.R +365 -0
  58. package/skills/analyze-stats/references/templates/propensity_score.py +478 -0
  59. package/skills/analyze-stats/references/templates/regression.py +425 -0
  60. package/skills/analyze-stats/references/templates/repeated_measures.py +434 -0
  61. package/skills/analyze-stats/references/templates/sample_size.R +382 -0
  62. package/skills/analyze-stats/references/templates/survey_weighted_analysis.py +411 -0
  63. package/skills/analyze-stats/references/templates/survival_analysis.py +325 -0
  64. package/skills/analyze-stats/references/templates/table1_demographics.py +287 -0
  65. package/skills/analyze-stats/scripts/check_generated_code.py +335 -0
  66. package/skills/analyze-stats/skill.yml +38 -0
  67. package/skills/analyze-stats/tests/fixtures/gen_bad.R +16 -0
  68. package/skills/analyze-stats/tests/fixtures/gen_bad.py +24 -0
  69. package/skills/analyze-stats/tests/fixtures/gen_clean.py +21 -0
  70. package/skills/analyze-stats/tests/test_generated_code.sh +59 -0
  71. package/skills/analyze-stats/tests/test_survival_template.sh +53 -0
  72. package/skills/author-strategy/SKILL.md +117 -0
  73. package/skills/author-strategy/analyze_patterns.py +303 -0
  74. package/skills/author-strategy/fetch_pubmed.py +374 -0
  75. package/skills/author-strategy/skill.yml +34 -0
  76. package/skills/batch-cohort/SKILL.md +223 -0
  77. package/skills/batch-cohort/references/base_template_knhanes.R +210 -0
  78. package/skills/batch-cohort/references/batch_template_generator.R +222 -0
  79. package/skills/batch-cohort/references/variable_coding_registry.md +136 -0
  80. package/skills/batch-cohort/skill.yml +35 -0
  81. package/skills/calc-sample-size/SKILL.md +491 -0
  82. package/skills/calc-sample-size/references/formulas.md +655 -0
  83. package/skills/calc-sample-size/references/observational_cohort.md +49 -0
  84. package/skills/calc-sample-size/skill.yml +51 -0
  85. package/skills/check-reporting/SKILL.md +534 -0
  86. package/skills/check-reporting/references/LICENSES.md +41 -0
  87. package/skills/check-reporting/references/checklists/AMSTAR2.md +54 -0
  88. package/skills/check-reporting/references/checklists/ARRIVE_2.md +234 -0
  89. package/skills/check-reporting/references/checklists/CARE.md +102 -0
  90. package/skills/check-reporting/references/checklists/CLAIM_2024.md +128 -0
  91. package/skills/check-reporting/references/checklists/CLEAR.md +113 -0
  92. package/skills/check-reporting/references/checklists/CONSORT.md +86 -0
  93. package/skills/check-reporting/references/checklists/COSMIN_RoB.md +136 -0
  94. package/skills/check-reporting/references/checklists/GRRAS.md +61 -0
  95. package/skills/check-reporting/references/checklists/MI_CLEAR_LLM.md +167 -0
  96. package/skills/check-reporting/references/checklists/MOOSE.md +85 -0
  97. package/skills/check-reporting/references/checklists/NOS.md +88 -0
  98. package/skills/check-reporting/references/checklists/PRISMA_2020.md +135 -0
  99. package/skills/check-reporting/references/checklists/PRISMA_DTA.md +36 -0
  100. package/skills/check-reporting/references/checklists/PRISMA_P.md +56 -0
  101. package/skills/check-reporting/references/checklists/PROBAST.md +75 -0
  102. package/skills/check-reporting/references/checklists/PROBAST_AI.md +130 -0
  103. package/skills/check-reporting/references/checklists/QUADAS2.md +77 -0
  104. package/skills/check-reporting/references/checklists/QUADAS_C.md +131 -0
  105. package/skills/check-reporting/references/checklists/ROBINS_E.md +179 -0
  106. package/skills/check-reporting/references/checklists/ROBINS_I.md +87 -0
  107. package/skills/check-reporting/references/checklists/ROBIS.md +114 -0
  108. package/skills/check-reporting/references/checklists/ROB_ME.md +126 -0
  109. package/skills/check-reporting/references/checklists/RoB2.md +79 -0
  110. package/skills/check-reporting/references/checklists/RoB_NMA.md +96 -0
  111. package/skills/check-reporting/references/checklists/SPIRIT.md +112 -0
  112. package/skills/check-reporting/references/checklists/SQUIRE_2.md +68 -0
  113. package/skills/check-reporting/references/checklists/STARD.md +129 -0
  114. package/skills/check-reporting/references/checklists/STARD_AI.md +211 -0
  115. package/skills/check-reporting/references/checklists/STROBE.md +80 -0
  116. package/skills/check-reporting/references/checklists/SWiM.md +33 -0
  117. package/skills/check-reporting/references/checklists/TRIPOD.md +157 -0
  118. package/skills/check-reporting/references/checklists/TRIPOD_AI.md +140 -0
  119. package/skills/check-reporting/references/step4c_registration_timing.md +93 -0
  120. package/skills/check-reporting/references/step4d_prisma_figure_audit.md +137 -0
  121. package/skills/check-reporting/scripts/check_checklist_exists.py +183 -0
  122. package/skills/check-reporting/scripts/check_checklist_version.py +168 -0
  123. package/skills/check-reporting/scripts/check_framework_naming.py +206 -0
  124. package/skills/check-reporting/scripts/check_prisma_figure.py +209 -0
  125. package/skills/check-reporting/scripts/prisma_cascade_check.py +274 -0
  126. package/skills/check-reporting/skill.yml +41 -0
  127. package/skills/check-reporting/tests/fixtures/framework_bad.md +8 -0
  128. package/skills/check-reporting/tests/fixtures/framework_clean.md +7 -0
  129. package/skills/check-reporting/tests/test_checklist_fail_fast.sh +77 -0
  130. package/skills/check-reporting/tests/test_checklist_version.sh +72 -0
  131. package/skills/check-reporting/tests/test_framework_naming.sh +45 -0
  132. package/skills/check-reporting/tests/test_prisma_cascade.sh +104 -0
  133. package/skills/clean-data/SKILL.md +180 -0
  134. package/skills/clean-data/references/cleaning_patterns.md +299 -0
  135. package/skills/clean-data/references/profiling_template.py +304 -0
  136. package/skills/clean-data/scripts/check_structural_zero.py +174 -0
  137. package/skills/clean-data/skill.yml +35 -0
  138. package/skills/clean-data/tests/fixtures/smoking.csv +8 -0
  139. package/skills/clean-data/tests/test_structural_zero.sh +49 -0
  140. package/skills/cross-national/SKILL.md +264 -0
  141. package/skills/cross-national/skill.yml +37 -0
  142. package/skills/define-variables/SKILL.md +146 -0
  143. package/skills/define-variables/references/common_definitions.md +190 -0
  144. package/skills/define-variables/skill.yml +34 -0
  145. package/skills/define-variables/templates/variable_operationalization.md +64 -0
  146. package/skills/deidentify/SKILL.md +203 -0
  147. package/skills/deidentify/deidentify.py +1224 -0
  148. package/skills/deidentify/locales/_template.json +45 -0
  149. package/skills/deidentify/locales/au.json +43 -0
  150. package/skills/deidentify/locales/ca.json +44 -0
  151. package/skills/deidentify/locales/cn.json +47 -0
  152. package/skills/deidentify/locales/de.json +48 -0
  153. package/skills/deidentify/locales/fr.json +48 -0
  154. package/skills/deidentify/locales/in.json +48 -0
  155. package/skills/deidentify/locales/jp.json +48 -0
  156. package/skills/deidentify/locales/kr.json +48 -0
  157. package/skills/deidentify/locales/uk.json +45 -0
  158. package/skills/deidentify/locales/us.json +43 -0
  159. package/skills/deidentify/references/date_shift_guide.md +82 -0
  160. package/skills/deidentify/references/hipaa_18_identifiers.md +48 -0
  161. package/skills/deidentify/references/korean_phi_patterns.md +135 -0
  162. package/skills/deidentify/skill.yml +43 -0
  163. package/skills/deidentify/tests/README.md +26 -0
  164. package/skills/deidentify/tests/test_clean.csv +16 -0
  165. package/skills/deidentify/tests/test_edge_cases.csv +11 -0
  166. package/skills/deidentify/tests/test_phi_korean.csv +11 -0
  167. package/skills/design-ai-benchmarking/SKILL.md +214 -0
  168. package/skills/design-ai-benchmarking/references/benchmark_export_schema.json +69 -0
  169. package/skills/design-ai-benchmarking/references/elicitation_rubric_template.md +37 -0
  170. package/skills/design-ai-benchmarking/skill.yml +38 -0
  171. package/skills/design-study/SKILL.md +298 -0
  172. package/skills/design-study/skill.yml +33 -0
  173. package/skills/fill-icmje-coi/SKILL.md +216 -0
  174. package/skills/fill-icmje-coi/scripts/fill_icmje_coi.py +140 -0
  175. package/skills/fill-icmje-coi/skill.yml +35 -0
  176. package/skills/fill-icmje-coi/templates/icmje_coi_seed_synthetic.docx +0 -0
  177. package/skills/fill-protocol/SKILL.md +248 -0
  178. package/skills/fill-protocol/examples/example_irb_template.yaml +53 -0
  179. package/skills/fill-protocol/references/best_practices.md +121 -0
  180. package/skills/fill-protocol/scripts/doc_to_docx.py +111 -0
  181. package/skills/fill-protocol/scripts/fill_form.py +611 -0
  182. package/skills/fill-protocol/scripts/inspect_template.py +61 -0
  183. package/skills/fill-protocol/setup.sh +162 -0
  184. package/skills/fill-protocol/skill.yml +37 -0
  185. package/skills/find-cohort-gap/SKILL.md +309 -0
  186. package/skills/find-cohort-gap/references/cohort_profile_template.md +93 -0
  187. package/skills/find-cohort-gap/references/onepager_template.md +84 -0
  188. package/skills/find-cohort-gap/references/pattern_scoring_rubric.md +169 -0
  189. package/skills/find-cohort-gap/references/saturation_query_templates.md +143 -0
  190. package/skills/find-cohort-gap/skill.yml +35 -0
  191. package/skills/find-journal/POLICY.md +87 -0
  192. package/skills/find-journal/SKILL.md +340 -0
  193. package/skills/find-journal/references/journal_profiles/AJNR.md +29 -0
  194. package/skills/find-journal/references/journal_profiles/AJR.md +30 -0
  195. package/skills/find-journal/references/journal_profiles/Abdominal_Radiology.md +30 -0
  196. package/skills/find-journal/references/journal_profiles/Academic_Radiology.md +30 -0
  197. package/skills/find-journal/references/journal_profiles/Annals_of_Internal_Medicine.md +33 -0
  198. package/skills/find-journal/references/journal_profiles/Artificial_Intelligence_in_Medicine.md +28 -0
  199. package/skills/find-journal/references/journal_profiles/BMC_Medicine.md +31 -0
  200. package/skills/find-journal/references/journal_profiles/British_Journal_of_Radiology.md +39 -0
  201. package/skills/find-journal/references/journal_profiles/CVIR.md +30 -0
  202. package/skills/find-journal/references/journal_profiles/Chest.md +39 -0
  203. package/skills/find-journal/references/journal_profiles/Clinical_Radiology.md +30 -0
  204. package/skills/find-journal/references/journal_profiles/Clinical_and_Molecular_Hepatology.md +32 -0
  205. package/skills/find-journal/references/journal_profiles/Diabetes_Metabolism_Journal.md +36 -0
  206. package/skills/find-journal/references/journal_profiles/Diagnostic_and_Interventional_Radiology.md +32 -0
  207. package/skills/find-journal/references/journal_profiles/Endocrinology_and_Metabolism.md +37 -0
  208. package/skills/find-journal/references/journal_profiles/European_Journal_of_Preventive_Cardiology.md +39 -0
  209. package/skills/find-journal/references/journal_profiles/European_Radiology.md +29 -0
  210. package/skills/find-journal/references/journal_profiles/Hepatology_Communications.md +40 -0
  211. package/skills/find-journal/references/journal_profiles/Hepatology_International.md +37 -0
  212. package/skills/find-journal/references/journal_profiles/IEEE_JBHI.md +28 -0
  213. package/skills/find-journal/references/journal_profiles/IEEE_TMI.md +28 -0
  214. package/skills/find-journal/references/journal_profiles/INSI.md +29 -0
  215. package/skills/find-journal/references/journal_profiles/Investigative_Radiology.md +25 -0
  216. package/skills/find-journal/references/journal_profiles/JACC_Advances.md +41 -0
  217. package/skills/find-journal/references/journal_profiles/JACC_Asia.md +30 -0
  218. package/skills/find-journal/references/journal_profiles/JACR.md +28 -0
  219. package/skills/find-journal/references/journal_profiles/JAMA.md +40 -0
  220. package/skills/find-journal/references/journal_profiles/JAMA_Network_Open.md +30 -0
  221. package/skills/find-journal/references/journal_profiles/JCSM.md +39 -0
  222. package/skills/find-journal/references/journal_profiles/JKMS.md +32 -0
  223. package/skills/find-journal/references/journal_profiles/JMIR.md +29 -0
  224. package/skills/find-journal/references/journal_profiles/JMIR_Medical_Education.md +29 -0
  225. package/skills/find-journal/references/journal_profiles/JNIS.md +35 -0
  226. package/skills/find-journal/references/journal_profiles/JVIR.md +31 -0
  227. package/skills/find-journal/references/journal_profiles/Journal_of_Biomedical_Informatics.md +29 -0
  228. package/skills/find-journal/references/journal_profiles/Journal_of_Clinical_Endocrinology_and_Metabolism.md +40 -0
  229. package/skills/find-journal/references/journal_profiles/Journal_of_Magnetic_Resonance_Imaging.md +30 -0
  230. package/skills/find-journal/references/journal_profiles/Journal_of_Nuclear_Medicine.md +31 -0
  231. package/skills/find-journal/references/journal_profiles/Journal_of_Stroke.md +32 -0
  232. package/skills/find-journal/references/journal_profiles/KJR.md +38 -0
  233. package/skills/find-journal/references/journal_profiles/Korean_Circulation_Journal.md +38 -0
  234. package/skills/find-journal/references/journal_profiles/Korean_Journal_of_Internal_Medicine.md +36 -0
  235. package/skills/find-journal/references/journal_profiles/Lancet_Diabetes_and_Endocrinology.md +40 -0
  236. package/skills/find-journal/references/journal_profiles/Lancet_Gastroenterology_and_Hepatology.md +49 -0
  237. package/skills/find-journal/references/journal_profiles/Lancet_Infectious_Diseases.md +38 -0
  238. package/skills/find-journal/references/journal_profiles/Lancet_Neurology.md +39 -0
  239. package/skills/find-journal/references/journal_profiles/Lancet_Oncology.md +40 -0
  240. package/skills/find-journal/references/journal_profiles/Lancet_Psychiatry.md +38 -0
  241. package/skills/find-journal/references/journal_profiles/Lancet_Public_Health.md +30 -0
  242. package/skills/find-journal/references/journal_profiles/Lancet_Respiratory_Medicine.md +39 -0
  243. package/skills/find-journal/references/journal_profiles/Liver_International.md +33 -0
  244. package/skills/find-journal/references/journal_profiles/Medical_Image_Analysis.md +28 -0
  245. package/skills/find-journal/references/journal_profiles/NEJM.md +33 -0
  246. package/skills/find-journal/references/journal_profiles/Nature_Machine_Intelligence.md +31 -0
  247. package/skills/find-journal/references/journal_profiles/Nature_Medicine.md +39 -0
  248. package/skills/find-journal/references/journal_profiles/Neuroradiology.md +31 -0
  249. package/skills/find-journal/references/journal_profiles/Nutrition_Metabolism_and_Cardiovascular_Diseases.md +39 -0
  250. package/skills/find-journal/references/journal_profiles/PLOS_Medicine.md +32 -0
  251. package/skills/find-journal/references/journal_profiles/RYAI.md +28 -0
  252. package/skills/find-journal/references/journal_profiles/Radiology.md +29 -0
  253. package/skills/find-journal/references/journal_profiles/Skeletal_Radiology.md +31 -0
  254. package/skills/find-journal/references/journal_profiles/Stroke.md +37 -0
  255. package/skills/find-journal/references/journal_profiles/The_BMJ.md +31 -0
  256. package/skills/find-journal/references/journal_profiles/The_Lancet.md +31 -0
  257. package/skills/find-journal/references/journal_profiles/The_Lancet_Digital_Health.md +29 -0
  258. package/skills/find-journal/references/journal_profiles/World_Journal_of_Hepatology.md +53 -0
  259. package/skills/find-journal/references/journal_profiles/npj_Digital_Medicine.md +29 -0
  260. package/skills/find-journal/skill.yml +34 -0
  261. package/skills/fulltext-retrieval/SKILL.md +174 -0
  262. package/skills/fulltext-retrieval/fetch_oa.py +433 -0
  263. package/skills/fulltext-retrieval/pdf_to_md.py +160 -0
  264. package/skills/fulltext-retrieval/skill.yml +41 -0
  265. package/skills/generate-codebook/SKILL.md +155 -0
  266. package/skills/generate-codebook/references/codebook_schema.md +76 -0
  267. package/skills/generate-codebook/scripts/generate_codebook.py +278 -0
  268. package/skills/generate-codebook/skill.yml +35 -0
  269. package/skills/generate-codebook/tests/test_generate_codebook.sh +76 -0
  270. package/skills/grant-builder/SKILL.md +251 -0
  271. package/skills/grant-builder/skill.yml +34 -0
  272. package/skills/humanize/SKILL.md +251 -0
  273. package/skills/humanize/references/ai_patterns.md +571 -0
  274. package/skills/humanize/skill.yml +33 -0
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@@ -0,0 +1,270 @@
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+ # Journal Profile: CHEST
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+
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+ ## Journal Identity
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+
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+ - **Full name**: CHEST (Journal of the American College of Chest Physicians)
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+ - **Abbreviation**: Chest
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+ - **Publisher**: Elsevier on behalf of the American College of Chest Physicians (ACCP)
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+ - **ISSN**: 0012-3692 (print), 1931-3543 (online)
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+ - **Frequency**: Monthly (12 issues/year)
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+ - **Impact Factor**: ~9 (JCR 2023), top-tier in pulmonary and critical care
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+ - **Open Access**: Hybrid (optional OA with APC $4,160; CC BY-NC-ND default, CC BY for mandated funders)
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+ - **Acceptance rate**: ~15% (approximate)
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+ - **Peer review**: **Double anonymized** (author identities concealed from reviewers and vice versa); handled by Editorial Manager; dedicated biostatistical review where applicable
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+
15
+ ---
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+
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+ ## Manuscript Types and Word Limits
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+
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+ Word counts exclude abstract, references, figure legends, and tables. Unsolicited submissions are accepted (Y) for the types marked below.
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+
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+ | Type | Unsolicited | Abstract | Body Word Limit | References |
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+ |------|-------------|----------|-----------------|------------|
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+ | Original Research | Y | 300 (structured) | 3,200 | 50 |
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+ | Research Letter | Y | None | 1,000 | 10 |
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+ | Guidelines and Consensus Statements | Y | 300 (structured) | 4,000 (negotiable) | 150 |
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+ | Systematic Reviews (no MA) | Y | 250 (structured) | 3,200 | 75 |
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+ | Scoping Reviews | Y | 250 (structured) | 3,200 | 50 |
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+ | Narrative Reviews | N (invited) | 250 (structured) | 3,500 | 75 |
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+ | Special Features | N (invited) | 250 (narrative) | 3,500 | 75 |
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+ | How I Do It | N (invited) | 250 (unstructured) | 3,000 | 50 |
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+ | Point/Counterpoint | N (invited) | None | 1,200 (rebuttal 500) | 12 (rebuttal 7) |
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+ | Editorials | N (invited) | None | 1,000 | 12 |
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+ | CHEST Commentary | N (invited) | None | 1,000 | 5 |
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+ | Novel Reports (case) | Y | 150 (narrative) | 750 single / 1,200 multi | 10 |
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+ | Chest Imaging & Pathology | Y | None | 1,600 | 10 |
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+ | CHEST Pearls | Y | None | 1,600 | 10 |
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+ | Ultrasound Corner | Y | None | 1,200 | 10 |
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+ | Humanities: Case-Based Discussion | N (invited) | 250 (unstructured) | 2,500 | 50 |
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+ | Humanities: Consilia Historiae | N (invited) | 250 (narrative) | 2,500 | 50 |
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+ | Humanities: Vantage | N (invited) | None | 1,200 | 7 |
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+ | Humanities: Exhalations | Y | None | 1,200 | 7 |
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+ | Humanities: Original Research | Y | 300 (structured) | 3,200 | 50 |
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+ | Letter to the Editor | Y | None | 400 | 5 |
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+
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+ **Systematic reviews with meta-analysis are submitted as Original Research, not as Systematic Reviews.**
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+
47
+ ---
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+
49
+ ## Abstract Requirements
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+
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+ Original Research uses a **6-section structured abstract (300 words max)**:
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+
53
+ ```
54
+ Background: [Context and knowledge gap]
55
+ Research Question: [Single interrogative sentence — the specific question]
56
+ Study Design and Methods: [Design, setting, participants, exposures/outcomes,
57
+ analytic approach]
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+ Results: [Participant flow; primary and secondary findings with effect sizes,
59
+ 95% CIs, and P values]
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+ Interpretation: [Main conclusion, clinical implications, key limitation]
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+ Clinical Trial Registration: [Registry name, URL, registration number — RCTs only]
62
+ ```
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+
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+ **Critical terminology**: CHEST uses "Research Question" (not "Objective") and "Interpretation" (not "Conclusion"). The Research Question must be phrased as a single interrogative sentence.
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+
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+ Review types (Narrative, Scoping, Systematic, Special Feature) use structured abstracts with review-specific headings; consult the pertinent article-type section in the guidelines.
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+
68
+ Research Letters, Editorials, Point/Counterpoint, CHEST Commentary, Correspondence, and most case-based sections do **not** require an abstract.
69
+
70
+ ---
71
+
72
+ ## Required Submission Components (Separate Uploads)
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+
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+ Editorial Manager requires **each** of the following as a separate upload:
75
+
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+ 1. **Cover Letter**
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+ 2. **Title Page** (author details, IRB approval info, corresponding author full mailing + email address, COI summaries, funding, prior presentation, author contributions)
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+ 3. **Anonymized Manuscript** — main body with references, tables, figure legends, and disclosures; **no author or institutional identifiers anywhere**
79
+ 4. **Figure files** (TIFF, JPEG, PDF, or EPS)
80
+ 5. **Supplemental material** (e-Tables, e-Figures, e-Appendix numbered consecutively)
81
+ 6. **Permissions** (for any reused material)
82
+ 7. **Patient consent** (case-based sections and identifiable images)
83
+ 8. **Conflict of Interest form** (ICMJE .docx template, one per author)
84
+
85
+ The anonymized manuscript must remove author names, affiliations, acknowledgments, and any identifying study-site references; IRB approval statements should be anonymized (full committee name + approval number live on the Title Page only).
86
+
87
+ ---
88
+
89
+ ## Required Sections (Original Research)
90
+
91
+ 1. **Introduction** — unlabeled; establish importance, identify gap, state research question
92
+ 2. **Study Design and Methods** — ethics/IRB (anonymized in manuscript), design, participants, exposures/outcomes, statistical analysis (pre-specified vs post-hoc distinction required for subgroup analyses)
93
+ 3. **Results** — participant flow first; baseline characteristics; primary then secondary outcomes
94
+ 4. **Discussion** — key findings, mechanistic context, comparison with prior evidence, strengths, dedicated limitations paragraph
95
+ 5. **Interpretation** — brief synthesis (distinct from Conclusion sections used by other journals)
96
+ 6. **Acknowledgments** (lives on Title Page for submission): guarantor statement, author contributions (ICMJE criteria), financial/nonfinancial disclosures matching Title Page, role of sponsors
97
+ 7. **Declaration of Generative AI and AI-assisted technologies in the writing process** — placed **before References** when applicable
98
+ 8. **References**
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+
100
+ **Take-Home Point pullout**: Three short sentences (Study Question / Results / Interpretation) provided at submission; published as a pullout.
101
+
102
+ **Subheading rules**: No more than 8 subheadings per article beyond the main section headings. Each subheading is capped at 5 words (including articles like "a", "the").
103
+
104
+ ---
105
+
106
+ ## Statistical Reporting
107
+
108
+ - **P values**: Italicized, capitalized ("*P* = .032"); report exact values; use *P* < .001 for very small values.
109
+ - **95% CI required** for primary outcome and key between-group comparisons, in both Abstract and main text.
110
+ - Effect sizes (HR, OR, RR, mean difference) must be accompanied by 95% CI — no P value without an accompanying effect estimate.
111
+ - **Matching language to evidence (HEART Group)**: Observational studies use descriptive language ("we observed a lower risk") rather than causal language ("reduced the risk by"); the latter is reserved for RCTs.
112
+ - **RCTs**: Follow CONSORT checklist; include CONSORT flow diagram as Figure 1; register in an approved public trials registry at or before enrollment; include registration at the end of the abstract.
113
+ - **Observational studies**: Follow STROBE checklist.
114
+ - **Systematic reviews/meta-analyses**: Follow PRISMA; include PRISMA flow diagram as Figure 1; PROSPERO registration strongly encouraged.
115
+ - **Case reports**: Follow CARE.
116
+ - Report statistical software and version.
117
+ - Report missing data handling (complete case, multiple imputation, etc.).
118
+ - Multivariable models: report both adjusted and unadjusted estimates where relevant; specify variable selection method.
119
+ - Subgroup analyses: distinguish pre-specified vs post-hoc; test for interaction.
120
+
121
+ ---
122
+
123
+ ## Figures
124
+
125
+ - **Formats accepted**: TIFF, JPEG, PDF, EPS.
126
+ - **Color**: Published free of charge (print and online).
127
+ - **AMA/CHEST label conventions**:
128
+ - "*P*" italicized and capitalized in P values.
129
+ - Comma separators for numbers with 4+ digits (e.g., 1,234).
130
+ - Superscript letters (a, b, c) for footnotes.
131
+ - "Control subjects" not "controls".
132
+ - "Patients with COPD" not "COPD patients".
133
+ - Capital "N" for total sample size.
134
+ - **Radiologic/diagnostic images**: Remove all patient-related numbering (test date, MRN) before submission.
135
+ - **Legends**: Provided on a separate page (not on the figure itself); stains and magnifications for photomicrographs required; permissions for republished figures noted in legend; any image manipulation (e.g., splicing) described.
136
+ - **Figure 1 conventions**: CONSORT (RCTs), PRISMA (SRs), STROBE-compatible flow diagrams (cohort/case-control) recommended.
137
+
138
+ ---
139
+
140
+ ## Tables
141
+
142
+ - Provided as **Word processing documents** (not spreadsheet format, not image).
143
+ - **Maximum 10 columns**; tables exceeding this will not be published.
144
+ - No shading or special symbols; any special formatting (bold, italic) explained in the legend.
145
+ - Self-explanatory with succinct title, column/row headers, legend defining abbreviations, lettered superscript footnotes.
146
+ - Tables comparing prior literature must include a column with lead author last name, year, and numbered citation matching the reference list.
147
+ - Tables may be placed at the end of the main document file.
148
+
149
+ ---
150
+
151
+ ## Supplemental Material (e-Appendix, e-Figure, e-Table)
152
+
153
+ - Labeled and numbered consecutively: **e-Table 1**, **e-Figure 1**, **e-Appendix 1**, Audio 1, Video 1.
154
+ - Cited in consecutive order in the main text (not interspersed with print-edition material).
155
+ - References in supplemental material are numbered independently from the main text.
156
+ - Manuscript title, author list, and "Supplemental Material" heading must appear at the beginning of each file.
157
+ - Video: .mov, .wmv, .avi, animated .gif, .mpeg, .mp4 (≤10 MB or 5 min); supply a still image for print reference.
158
+ - The main text must stand alone — judicious use of supplements only.
159
+
160
+ ---
161
+
162
+ ## References
163
+
164
+ - **Superscript numerals** in text, numbered consecutively in order of appearance.
165
+ - If a reference first appears in a table, the in-text callout places the reference number after the table call ("Table 3^27^...").
166
+ - **AMA Manual of Style (11th ed)** formatting.
167
+ - List all authors up to 6; if more than 6, list the first 3 followed by *et al*.
168
+ - Journal names abbreviated per Index Medicus.
169
+ - Article titles in **sentence case**, no quotation marks.
170
+ - Dataset citations allowed; prefix with `[dataset]` in the reference list.
171
+ - References in supplemental material numbered separately.
172
+
173
+ ---
174
+
175
+ ## Common Rejection Reasons
176
+
177
+ 1. **Scope mismatch** — studies without clear relevance to pulmonary, critical care, or sleep medicine.
178
+ 2. **Methodological concerns** — inadequate control for confounding, selection bias, immortal time bias, or violations of CONSORT/STROBE/PRISMA reporting.
179
+ 3. **Poorly defined research question** — the abstract's Research Question must be a precise, testable, single interrogative sentence.
180
+ 4. **Insufficient novelty** — incremental advances over existing guidelines or well-established evidence.
181
+ 5. **Statistical problems** — missing CIs, P values without effect estimates, inappropriate tests, multiple-comparisons inflation without correction.
182
+ 6. **Under-powered single-center observational work** without adequate external validity or multicenter scope.
183
+ 7. **Tobacco-company-funded research** — automatic rejection (see Tobacco Policy below).
184
+ 8. **Failure to anonymize** — submission must be fully anonymized in the manuscript file; author details live only in the separate Title Page upload.
185
+
186
+ ---
187
+
188
+ ## Cover Letter
189
+
190
+ Should include:
191
+ - Article type designation.
192
+ - Statement of novelty (1–2 sentences: what this adds to pulmonary/critical care practice).
193
+ - Confirmation of originality and no dual submission.
194
+ - Confirmation all authors approved the final version.
195
+ - Disclosure summary.
196
+ - Suggested reviewers (required for Original Research; encouraged for other types) — qualified in the subject area, not affiliated with any author's institution.
197
+ - Preprint disclosure (name of server + link) if applicable.
198
+ - Any related prior/concurrent submissions or presentations.
199
+
200
+ ---
201
+
202
+ ## AI Writing Disclosure Policy
203
+
204
+ - **Requirement level**: **Required** when generative AI is used in the writing process.
205
+ - **Permitted scope**: Only to **improve readability and language**; not for substantive analysis, interpretation, or drawing insights from data. Basic grammar/spelling tools are exempt from disclosure.
206
+ - **Disclosure location**: A dedicated section titled **"Declaration of Generative AI and AI-assisted technologies in the writing process"**, placed at the end of the core manuscript file **before the References list**. Statement template: *"During the preparation of this work the author(s) used [NAME TOOL / SERVICE] in order to [REASON]. After using this tool/service, the author(s) reviewed and edited the content as needed and take(s) full responsibility for the content of the publication."*
207
+ - **Authorship**: AI tools cannot be listed as authors or co-authors, nor cited as authors — authorship implies responsibilities only humans can take.
208
+ - **AI-generated images**: Not explicitly specified in CHEST's author guidelines; Elsevier's publisher-level policy generally requires disclosure of any AI-generated or manipulated figures.
209
+ - **Policy URL**: https://journal.chestnet.org/content/authors (publisher-level policy: Elsevier AI policy for authors)
210
+
211
+ ---
212
+
213
+ ## Tobacco Policy
214
+
215
+ CHEST **will not consider** research or manuscripts that have been supported by tobacco companies, including their subsidiaries and affiliates. Any tobacco industry funding must be disclosed and will trigger rejection.
216
+
217
+ ---
218
+
219
+ ## Preprints
220
+
221
+ CHEST considers manuscripts previously posted to preprint servers provided:
222
+ - The preprint is flagged as not peer-reviewed.
223
+ - The cover letter and disclosures note the server name and link to the posting.
224
+ - The final, published version (not the preprint) is cited in any downstream work.
225
+
226
+ ---
227
+
228
+ ## Author Guidelines URL
229
+
230
+ https://journal.chestnet.org/content/authors
231
+
232
+ (Submission via Editorial Manager: https://www.editorialmanager.com/chest)
233
+
234
+ ---
235
+
236
+ ## Positioning
237
+
238
+ **Choose CHEST when**:
239
+ - Pulmonary, critical care, or sleep-medicine research with clear clinical relevance and practice impact.
240
+ - Lung imaging study (CT screening, AI nodule detection, COPD/emphysema quantification) linked to **clinical endpoint** or guideline-relevant outcome.
241
+ - Meta-analysis or systematic review of respiratory interventions, diagnostics, or critical-care management.
242
+ - Guideline-adjacent research (Lung-RADS, Fleischner Society, ACCP/CHEST guideline evidence).
243
+ - Large RCT or prospective cohort in COPD, asthma, ILD, PE, sepsis/ARDS, or sleep apnea.
244
+
245
+ **Avoid CHEST for**: basic science without translational relevance, purely technical imaging/AI methodology without clinical validation, non-respiratory disease, small single-institution case series (submit as Novel Report only if truly unique).
246
+
247
+ | Dimension | CHEST | AJRCCM | ERJ |
248
+ |-----------|-------|--------|-----|
249
+ | Society | ACCP (American College of Chest Physicians) | ATS (American Thoracic Society) | ERS (European Respiratory Society) |
250
+ | Scope emphasis | Clinical practice, guidelines, CT screening, critical care | Translational + clinical, mechanistic | Clinical + epidemiology, European policy |
251
+ | Impact factor (2023) | ~9 | ~24 | ~17 |
252
+ | Distinguishing feature | Strong pulmonary-imaging presence; Take-Home Point pullouts; dedicated Humanities section | Highest-impact ATS venue; mechanism-emphasis | ERS flagship; strong cohort/registry work |
253
+ | Peer review | Double anonymized | Single-blind | Single-blind |
254
+
255
+ ---
256
+
257
+ ## CHEST-Specific Nuances (Cheat Sheet for Submission)
258
+
259
+ - "Interpretation" replaces "Conclusion" in both abstract and main-text section headings.
260
+ - "Research Question" replaces "Objective" in the abstract; must be interrogative.
261
+ - "Study Design and Methods" replaces "Methods" as the section heading.
262
+ - Take-Home Point pullout (3 sentences) is required at submission.
263
+ - Anonymized manuscript + separate Title Page + separate COI form (ICMJE) are mandatory upload components.
264
+ - CONSORT/PRISMA/STROBE/CARE flow diagrams (as applicable) must be Figure 1 for the relevant study type.
265
+ - Supplemental labeled as e-Table/e-Figure/e-Appendix (lowercase "e-", not "S").
266
+ - ICMJE disclosure form (.docx) — do not convert to other formats; signatures not required.
267
+
268
+ ---
269
+
270
+ <!-- Source verification: Author guidelines text pasted in full by maintainer on 2026-04-20 (equivalent to directly opened guidelines page). ISSN and publisher confirmed against journal homepage https://journal.chestnet.org/. Promoted from private tier to public on 2026-04-20 after reconciliation with official guidelines. -->
@@ -0,0 +1,160 @@
1
+ # Journal Profile: Clinical Radiology
2
+
3
+ ## Journal Identity
4
+
5
+ - **Full name**: Clinical Radiology
6
+ - **Abbreviation**: Clin Radiol
7
+ - **Publisher**: Elsevier (Royal College of Radiologists, RCR)
8
+ - **ISSN**: 0009-9260 (print), 1365-229X (online)
9
+ - **Frequency**: Monthly (12 issues/year)
10
+ - **Impact Factor**: ~2.8 (JCR 2023)
11
+ - **Open Access**: Hybrid (optional OA with Elsevier APC)
12
+ - **Acceptance rate**: ~25-30%
13
+ - **Peer review**: Single-blind; typically 2-3 reviewers
14
+
15
+ ## Manuscript Types and Word Limits
16
+
17
+ | Type | Body Word Limit | Abstract | References | Figures/Tables |
18
+ |------|----------------|----------|------------|----------------|
19
+ | Original Article | 3000 words | 250 words (structured) | 30 | 6 |
20
+ | Review Article | 4000 words | 250 words | 50 | 8 |
21
+ | Technical Note | 1500 words | 150 words (unstructured) | 15 | 4 |
22
+ | Case Report | 1000 words | 100 words (unstructured) | 8 | 4 |
23
+ | Pictorial Review | 3000 words | 200 words | 25 | 12 |
24
+ | Letter to the Editor | 500 words | None | 5 | 1 |
25
+
26
+ Word counts exclude abstract, references, tables, and figure legends.
27
+
28
+ ---
29
+
30
+ ## Abstract Requirements
31
+
32
+ **Structured abstract for Original Articles, 250 words maximum:**
33
+
34
+ ```
35
+ AIM: [Study aim — 1 sentence]
36
+ MATERIALS AND METHODS: [Design, population, imaging, analysis]
37
+ RESULTS: [Key findings with statistics]
38
+ CONCLUSION: [Main conclusion — 1-2 sentences]
39
+ ```
40
+
41
+ **Note**: Clinical Radiology uses uppercase heading labels in the abstract.
42
+
43
+ ---
44
+
45
+ ## Required Sections (Original Article)
46
+
47
+ 1. **Introduction** — clinical context, gap, purpose (2-3 paragraphs)
48
+ 2. **Materials and Methods**
49
+ - Study design and ethics
50
+ - Patient selection
51
+ - Imaging technique
52
+ - Image analysis and interpretation
53
+ - Statistical analysis
54
+ 3. **Results**
55
+ 4. **Discussion** — including limitations paragraph
56
+ 5. **Conclusion**
57
+
58
+ ---
59
+
60
+ ## Statistical Reporting
61
+
62
+ - Report exact p-values; use p < 0.001 below that threshold.
63
+ - 95% CI for primary outcomes.
64
+ - For diagnostic accuracy: sensitivity, specificity, PPV, NPV, accuracy with 95% CI.
65
+ - Inter-reader agreement where applicable.
66
+ - Effect sizes with clinically meaningful units.
67
+ - Statistical software and version must be identified.
68
+
69
+ ---
70
+
71
+ ## UK-Specific Considerations
72
+
73
+ ### NHS Context
74
+
75
+ Clinical Radiology serves a largely UK/Commonwealth readership:
76
+ - Reference NHS guidelines and NICE recommendations where applicable
77
+ - Report findings in context of UK radiology practice and referral pathways
78
+ - Acknowledge NHS-specific constraints (scanner availability, contrast protocols)
79
+
80
+ ### RCR Standards
81
+
82
+ - Reference RCR iRefer guidelines when discussing referral appropriateness
83
+ - Radiation dose reporting: DLP and CTDIvol for CT studies
84
+ - Reference UK national screening programmes where relevant (NHSBSP, lung screening)
85
+
86
+ ### Ethical Reporting
87
+
88
+ - Health Research Authority (HRA) approval for NHS-based studies
89
+ - IRAS reference number where applicable
90
+ - Caldicott guardian approval for data access studies
91
+
92
+ ---
93
+
94
+ ## Figures
95
+
96
+ - **Maximum 6 figures/tables** for original articles; **12 for Pictorial Reviews**
97
+ - **Resolution**: 300 DPI minimum
98
+ - **Format**: TIFF, EPS, JPEG, PDF
99
+ - **Color**: Free online
100
+ - **British English**: captions and labels in British English (colour, tumour, centre)
101
+
102
+ ---
103
+
104
+ ## Language
105
+
106
+ **British English throughout**:
107
+ - colour, tumour, centre, analyse, programme, speciality
108
+ - -ise endings (recognise, standardise, organise)
109
+ - Dates: day month year (11 April 2026)
110
+
111
+ ---
112
+
113
+ ## Common Rejection Reasons
114
+
115
+ 1. **Too specialist for general radiology audience** — Clinical Radiology covers all modalities and body regions; needs broad appeal
116
+ 2. **American English** — must use British English throughout
117
+ 3. **No UK/Commonwealth relevance** — studies purely from non-UK settings need to address transferability
118
+ 4. **Small sample without novelty** — straightforward retrospective studies need strong contribution
119
+ 5. **Missing radiation dose data** — expected for CT studies given UK dose awareness culture
120
+
121
+ ---
122
+
123
+ ## Cover Letter
124
+
125
+ Should include:
126
+ - Relevance to UK radiology practice
127
+ - Key finding summary
128
+ - Statement of originality and non-dual submission
129
+ - Suggested reviewers (optional)
130
+
131
+ ---
132
+
133
+ ## Author Guidelines URL
134
+
135
+ https://www.clinicalradiologyonline.net/content/authorinfo
136
+
137
+ ---
138
+
139
+ ## Positioning
140
+
141
+ Clinical Radiology is appropriate when:
142
+ - Radiology study with relevance to UK/Commonwealth practice
143
+ - Multi-modality imaging study with broad clinical applicability
144
+ - AI in radiology with NHS implementation perspective
145
+ - Audit or quality improvement study in radiology
146
+ - Pictorial review of imaging appearances across body regions
147
+
148
+ Not appropriate for: highly technical AI methodology without clinical context, narrow subspecialty studies better suited to dedicated journals (AJNR, Skeletal Radiology, etc.), non-radiology imaging.
149
+
150
+ ---
151
+
152
+ ## Differentiation from Related Journals
153
+
154
+ | Dimension | Clinical Radiology | British Journal of Radiology | European Radiology |
155
+ |-----------|-------------------|----------------------------|-------------------|
156
+ | Society | RCR (UK) | BIR (UK/international) | ESR (European) |
157
+ | Scope | General clinical radiology | Radiology + radiation oncology + physics | General radiology (broader) |
158
+ | Language | British English (strict) | British English | British/American English |
159
+ | Impact factor | ~2.8 | ~2.0 | ~5.9 |
160
+ | Emphasis | Clinical practice, NHS context | Physics, technology, oncology | European multicenter, AI |
@@ -0,0 +1,147 @@
1
+ # Journal Profile: Clinical and Molecular Hepatology
2
+
3
+ ## Journal Identity
4
+
5
+ - **Full name**: Clinical and Molecular Hepatology
6
+ - **Abbreviation**: Clin Mol Hepatol
7
+ - **Publisher**: Korean Association for the Study of the Liver (KASL)
8
+ - **ISSN**: 2287-2728 (print), 2287-285X (online)
9
+ - **Frequency**: Quarterly (January, April, July, October)
10
+ - **Impact Factor**: [TODO: verify at JCR]
11
+ - **Open Access**: Full OA (APC US$1,500 since February 2024; previously US$1,000)
12
+ - **Acceptance rate**: [TODO: verify at journal site]
13
+ - **Peer review**: Blind peer review; ≥2 referees; first decision in approximately 1 month; fast-track option (7-day first decision) available for additional US$1,000
14
+
15
+ ## Manuscript Types and Word Limits
16
+
17
+ | Type | Body Word Limit | Abstract | References | Figures/Tables |
18
+ |------|----------------|----------|------------|----------------|
19
+ | Original Article | 6,000 (incl. abstract, refs, tables, figure legends) | 250 words structured | 50 | 8 (max 6 panels per figure) |
20
+ | Review Article | 5,000 | [TODO: verify] | [TODO: verify] | 8 |
21
+ | Editorial | 1,500 | — | 20 | 1 |
22
+ | Letter to the Editor | 800 | None | 15 | 1 (max 6 authors) |
23
+ | Correspondence | 1,500 | — | 15 | 1 |
24
+ | Special Topic | 800 | — | 10 | — |
25
+ | Snapshot | 600 | — | 10 | 1 large page figure |
26
+ | Research Letter (online-only) | 1,500 (excl. title/refs/legend) | Structured (Objective / Study Design / Results / Conclusion) — no traditional abstract | 15 | 1 table OR 1 figure; max 7 authors |
27
+
28
+ ---
29
+
30
+ ## Abstract Requirements
31
+
32
+ Original Article: 250 words maximum, **structured** under four sub-headings:
33
+
34
+ ```
35
+ Background/Aims:
36
+ Methods:
37
+ Results:
38
+ Conclusions:
39
+ ```
40
+
41
+ Followed by 3–5 keywords.
42
+
43
+ Research Letters: structured four-section format (Objective / Study Design / Results / Conclusion), no abstract per se.
44
+
45
+ ---
46
+
47
+ ## Required Sections (Original Article)
48
+
49
+ In exact order:
50
+
51
+ 1. **Title page**
52
+ 2. **Abstract** (250 words structured, 3–5 keywords)
53
+ 3. **Highlights** — mandatory on revised manuscript, encouraged at initial submission. 3–4 sentences summarizing originality and main findings, ≤100 words total, boxed after abstract
54
+ 4. **Introduction** — minimum background; do not engage in literature review
55
+ 5. **Materials and Methods** (or Patients and Methods) — detail sufficient for replication; cite statistical methods
56
+ 6. **Results**
57
+ 7. **Discussion** — implications for the field; avoid repetition of results or introduction
58
+ 8. **Acknowledgements**
59
+ 9. **Conflict of Interest statement** — prior to references
60
+ 10. **References** — numbered, superscript Arabic, ≤50
61
+ 11. **Tables** (individual sheets, numbered)
62
+ 12. **Figure legends** (separate sheet)
63
+
64
+ **Graphical abstract is MANDATORY** for original articles (separate JPG/TIFF upload; minimum 531×531 px at 600 dpi; final display 200×500 px rectangle).
65
+
66
+ ---
67
+
68
+ ## Statistical Reporting
69
+
70
+ - Identify and provide references for all statistical methods used (stated explicitly).
71
+ - Sex/gender reporting: distinguish sex (biological) from gender (identity); report sex of participants, animals, or cells and methods used to determine them.
72
+ - Race/ethnicity: define how determined and justify relevance.
73
+ - Exclusive-population studies (e.g., single sex): justify unless self-evident (e.g., prostate cancer).
74
+ - [TODO: verify at journal site] Specific p-value format (significant figures, threshold).
75
+ - [TODO: verify at journal site] 95% CI vs exact p-value preference.
76
+
77
+ Default — until verified: report exact p-values to 2–3 significant figures; use p<0.001 below that threshold; 95% CI for primary outcomes; state statistical software and version.
78
+
79
+ ---
80
+
81
+ ## Figures
82
+
83
+ - **Maximum**: 8 figures/tables combined; max 6 panels per figure
84
+ - **Resolution**: ≥300 dpi
85
+ - **Format**: JPG or TIFF
86
+ - **Color**: permitted (authors charged for color figures)
87
+ - **Microscopic images**: must specify staining method and magnification scale
88
+ - **Graphical abstract**: 531×531 px minimum at 600 dpi (mandatory, separate JPG/TIFF file)
89
+
90
+ ---
91
+
92
+ ## Common Rejection Reasons
93
+
94
+ 1. Poor English syntax (journal recommends professional editing pre-submission)
95
+ 2. Concurrent or prior publication of the same or closely related data
96
+ 3. Missing or inadequate IRB / Declaration of Helsinki statement
97
+ 4. Missing graphical abstract for original article submission
98
+ 5. Exceeding word / reference / figure limits
99
+ 6. Failure to follow structured abstract format (BG/Aims, Methods, Results, Conclusions)
100
+ 7. Requiring more than two revision cycles or resubmission beyond 2 months (treated as new submission)
101
+
102
+ ---
103
+
104
+ ## Cover Letter
105
+
106
+ Should include:
107
+ - Confirmation that neither the submitted material nor portions thereof have been published or are under consideration elsewhere
108
+ - Corresponding author contact (name, address, telephone, fax, email, ORCID)
109
+ - Any prior related publication enclosed for editor review
110
+ - Suggested reviewers (if journal requests; verify at submission portal)
111
+ - Brief highlight of manuscript's significance for the hepatology field
112
+
113
+ ---
114
+
115
+ ## AI Writing Disclosure Policy
116
+
117
+ - **Requirement level:** Required — follows ICMJE guidance as adopted by the journal
118
+ - **Permitted scope:** Disclosure of all AI-assisted technologies used to produce submitted work (large language models, chatbots, image creators). Basic grammar/spelling/reference-check tools are exempt. AI cannot be listed as an author.
119
+ - **Disclosure location:** **Acknowledgements** section, with three mandatory elements: (1) name of AI software, version, manufacturer, and date(s) of use; (2) brief description of how the AI was used and on which portions of the manuscript; (3) confirmation that the author(s) take full responsibility for the integrity of the content generated
120
+ - **AI-generated images:** Must be declared under the same disclosure rule. Citation of AI-generated material as a primary source is not acceptable.
121
+ - **Policy URL:** https://www.e-cmh.org (Instructions for Authors, section "Use of Generative AI and AI-Assisted Technologies in Publication and Research")
122
+
123
+ ---
124
+
125
+ ## Author Guidelines URL
126
+
127
+ https://www.e-cmh.org/authors/authors.php
128
+
129
+ Editorial Office: Room A1210, Mapo Trapalace, 53 Mapo-daero, Mapo-gu, 04158, Seoul, Korea; tel +82-2-703-0051; fax +82-2-703-0071; email kasl@kams.or.kr
130
+ Submission portal: https://mc04.manuscriptcentral.com/cmh
131
+
132
+ ---
133
+
134
+ ## Positioning
135
+
136
+ **When to submit here.** Korean or Asian health-screening / hospital-cohort studies on NAFLD / MASLD / ALD / MetALD, hepatitis B / C natural history, HCC surveillance, KASL-guideline-adherent clinical work, and basic-science translational studies with clear clinical relevance. KASL's flagship journal — strongly preferred for papers that directly cite KASL clinical practice guidelines or Korean national cohort data.
137
+
138
+ **When NOT to submit here.** Pure methodology/statistics papers without hepatology content; AI-only papers without liver-disease outcome validation; reports of non-liver disease primary outcomes.
139
+
140
+ | Dimension | Clinical and Molecular Hepatology | Journal of Hepatology (EASL) | Hepatology (AASLD) | Liver International |
141
+ |-----------|----------------------------------|------------------------------|--------------------|---------------------|
142
+ | Society | KASL (Korean) | EASL (European) | AASLD (American) | Wiley, independent |
143
+ | Scope | Basic + clinical hepatology; strong Korean/Asian cohort focus | Basic + clinical hepatology; European / global | Basic + clinical hepatology; American-weighted | Clinical + experimental hepatology; international multi-disciplinary |
144
+ | Impact factor | [verify JCR] | [verify JCR] | [verify JCR] | [verify JCR] |
145
+ | Emphasis | Korean/Asian epidemiology, KASL guideline alignment, 2023 SLD nomenclature | Mechanistic + guideline-defining trials; desk reject aggressive | Mechanistic + AASLD guidance; competitive | Clinical utility, observational + translational |
146
+ | OA model | Full OA | Hybrid | Hybrid | Hybrid |
147
+ | Graphical abstract | Mandatory (original articles) | Mandatory | Mandatory | Optional |