medsci-skills 4.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (702) hide show
  1. package/LICENSE +50 -0
  2. package/README.md +602 -0
  3. package/README_FIRST.md +27 -0
  4. package/bin/medsci-skills.js +159 -0
  5. package/installers/install-macos.command +19 -0
  6. package/installers/install-windows.cmd +26 -0
  7. package/installers/install-windows.ps1 +17 -0
  8. package/installers/install.py +218 -0
  9. package/metadata/skills_catalog.json +452 -0
  10. package/package.json +48 -0
  11. package/skills/academic-aio/SKILL.md +408 -0
  12. package/skills/academic-aio/references/case_studies/kjr_mllm_2025.md +82 -0
  13. package/skills/academic-aio/references/checklists/AIO_GENERAL.md +354 -0
  14. package/skills/academic-aio/references/journal_summarybox_templates.yaml +126 -0
  15. package/skills/academic-aio/references/oac_funding_checklist.yaml +129 -0
  16. package/skills/academic-aio/references/reporting_guideline_mapping.md +39 -0
  17. package/skills/academic-aio/references/schema_markup_templates/CodeRepository.jsonld +32 -0
  18. package/skills/academic-aio/references/schema_markup_templates/Dataset.jsonld +36 -0
  19. package/skills/academic-aio/references/schema_markup_templates/Person.jsonld +30 -0
  20. package/skills/academic-aio/references/schema_markup_templates/README.md +43 -0
  21. package/skills/academic-aio/references/schema_markup_templates/ScholarlyArticle.jsonld +55 -0
  22. package/skills/academic-aio/scripts/batch_metadata_audit.py +169 -0
  23. package/skills/academic-aio/scripts/validate_schema.py +118 -0
  24. package/skills/academic-aio/skill.yml +36 -0
  25. package/skills/academic-aio/templates/aio_audit_checklist.md.j2 +108 -0
  26. package/skills/add-journal/SKILL.md +482 -0
  27. package/skills/add-journal/skill.yml +33 -0
  28. package/skills/analyze-stats/SKILL.md +598 -0
  29. package/skills/analyze-stats/references/analysis_guides/missing_data.md +109 -0
  30. package/skills/analyze-stats/references/analysis_guides/nhis_icd10_mapping.md +247 -0
  31. package/skills/analyze-stats/references/analysis_guides/propensity_score.md +132 -0
  32. package/skills/analyze-stats/references/analysis_guides/regression.md +115 -0
  33. package/skills/analyze-stats/references/analysis_guides/repeated_measures.md +160 -0
  34. package/skills/analyze-stats/references/analysis_guides/survey_weighted.md +366 -0
  35. package/skills/analyze-stats/references/analysis_guides/test_selection.md +86 -0
  36. package/skills/analyze-stats/references/style/figure_style.mplstyle +69 -0
  37. package/skills/analyze-stats/references/style/theme_publication.R +147 -0
  38. package/skills/analyze-stats/references/table-standards/journal-profiles/ajr.yaml +51 -0
  39. package/skills/analyze-stats/references/table-standards/journal-profiles/european_radiology.yaml +55 -0
  40. package/skills/analyze-stats/references/table-standards/journal-profiles/jama.yaml +66 -0
  41. package/skills/analyze-stats/references/table-standards/journal-profiles/lancet.yaml +57 -0
  42. package/skills/analyze-stats/references/table-standards/journal-profiles/nejm.yaml +51 -0
  43. package/skills/analyze-stats/references/table-standards/journal-profiles/radiology.yaml +66 -0
  44. package/skills/analyze-stats/references/table-standards/table-standards.md +287 -0
  45. package/skills/analyze-stats/references/table-standards/table-types/diagnostic_accuracy.md +36 -0
  46. package/skills/analyze-stats/references/table-standards/table-types/meta_analysis.md +58 -0
  47. package/skills/analyze-stats/references/table-standards/table-types/model_comparison.md +36 -0
  48. package/skills/analyze-stats/references/table-standards/table-types/regression_results.md +50 -0
  49. package/skills/analyze-stats/references/table-standards/table-types/table1_demographics.md +51 -0
  50. package/skills/analyze-stats/references/table-standards/tool-comparison.md +79 -0
  51. package/skills/analyze-stats/references/templates/agreement_analysis.py +436 -0
  52. package/skills/analyze-stats/references/templates/dca_plot.R +237 -0
  53. package/skills/analyze-stats/references/templates/diagnostic_accuracy.py +401 -0
  54. package/skills/analyze-stats/references/templates/dta_meta_analysis.R +384 -0
  55. package/skills/analyze-stats/references/templates/forest_plot.py +412 -0
  56. package/skills/analyze-stats/references/templates/likert_summary.py +356 -0
  57. package/skills/analyze-stats/references/templates/meta_analysis.R +365 -0
  58. package/skills/analyze-stats/references/templates/propensity_score.py +478 -0
  59. package/skills/analyze-stats/references/templates/regression.py +425 -0
  60. package/skills/analyze-stats/references/templates/repeated_measures.py +434 -0
  61. package/skills/analyze-stats/references/templates/sample_size.R +382 -0
  62. package/skills/analyze-stats/references/templates/survey_weighted_analysis.py +411 -0
  63. package/skills/analyze-stats/references/templates/survival_analysis.py +325 -0
  64. package/skills/analyze-stats/references/templates/table1_demographics.py +287 -0
  65. package/skills/analyze-stats/scripts/check_generated_code.py +335 -0
  66. package/skills/analyze-stats/skill.yml +38 -0
  67. package/skills/analyze-stats/tests/fixtures/gen_bad.R +16 -0
  68. package/skills/analyze-stats/tests/fixtures/gen_bad.py +24 -0
  69. package/skills/analyze-stats/tests/fixtures/gen_clean.py +21 -0
  70. package/skills/analyze-stats/tests/test_generated_code.sh +59 -0
  71. package/skills/analyze-stats/tests/test_survival_template.sh +53 -0
  72. package/skills/author-strategy/SKILL.md +117 -0
  73. package/skills/author-strategy/analyze_patterns.py +303 -0
  74. package/skills/author-strategy/fetch_pubmed.py +374 -0
  75. package/skills/author-strategy/skill.yml +34 -0
  76. package/skills/batch-cohort/SKILL.md +223 -0
  77. package/skills/batch-cohort/references/base_template_knhanes.R +210 -0
  78. package/skills/batch-cohort/references/batch_template_generator.R +222 -0
  79. package/skills/batch-cohort/references/variable_coding_registry.md +136 -0
  80. package/skills/batch-cohort/skill.yml +35 -0
  81. package/skills/calc-sample-size/SKILL.md +491 -0
  82. package/skills/calc-sample-size/references/formulas.md +655 -0
  83. package/skills/calc-sample-size/references/observational_cohort.md +49 -0
  84. package/skills/calc-sample-size/skill.yml +51 -0
  85. package/skills/check-reporting/SKILL.md +534 -0
  86. package/skills/check-reporting/references/LICENSES.md +41 -0
  87. package/skills/check-reporting/references/checklists/AMSTAR2.md +54 -0
  88. package/skills/check-reporting/references/checklists/ARRIVE_2.md +234 -0
  89. package/skills/check-reporting/references/checklists/CARE.md +102 -0
  90. package/skills/check-reporting/references/checklists/CLAIM_2024.md +128 -0
  91. package/skills/check-reporting/references/checklists/CLEAR.md +113 -0
  92. package/skills/check-reporting/references/checklists/CONSORT.md +86 -0
  93. package/skills/check-reporting/references/checklists/COSMIN_RoB.md +136 -0
  94. package/skills/check-reporting/references/checklists/GRRAS.md +61 -0
  95. package/skills/check-reporting/references/checklists/MI_CLEAR_LLM.md +167 -0
  96. package/skills/check-reporting/references/checklists/MOOSE.md +85 -0
  97. package/skills/check-reporting/references/checklists/NOS.md +88 -0
  98. package/skills/check-reporting/references/checklists/PRISMA_2020.md +135 -0
  99. package/skills/check-reporting/references/checklists/PRISMA_DTA.md +36 -0
  100. package/skills/check-reporting/references/checklists/PRISMA_P.md +56 -0
  101. package/skills/check-reporting/references/checklists/PROBAST.md +75 -0
  102. package/skills/check-reporting/references/checklists/PROBAST_AI.md +130 -0
  103. package/skills/check-reporting/references/checklists/QUADAS2.md +77 -0
  104. package/skills/check-reporting/references/checklists/QUADAS_C.md +131 -0
  105. package/skills/check-reporting/references/checklists/ROBINS_E.md +179 -0
  106. package/skills/check-reporting/references/checklists/ROBINS_I.md +87 -0
  107. package/skills/check-reporting/references/checklists/ROBIS.md +114 -0
  108. package/skills/check-reporting/references/checklists/ROB_ME.md +126 -0
  109. package/skills/check-reporting/references/checklists/RoB2.md +79 -0
  110. package/skills/check-reporting/references/checklists/RoB_NMA.md +96 -0
  111. package/skills/check-reporting/references/checklists/SPIRIT.md +112 -0
  112. package/skills/check-reporting/references/checklists/SQUIRE_2.md +68 -0
  113. package/skills/check-reporting/references/checklists/STARD.md +129 -0
  114. package/skills/check-reporting/references/checklists/STARD_AI.md +211 -0
  115. package/skills/check-reporting/references/checklists/STROBE.md +80 -0
  116. package/skills/check-reporting/references/checklists/SWiM.md +33 -0
  117. package/skills/check-reporting/references/checklists/TRIPOD.md +157 -0
  118. package/skills/check-reporting/references/checklists/TRIPOD_AI.md +140 -0
  119. package/skills/check-reporting/references/step4c_registration_timing.md +93 -0
  120. package/skills/check-reporting/references/step4d_prisma_figure_audit.md +137 -0
  121. package/skills/check-reporting/scripts/check_checklist_exists.py +183 -0
  122. package/skills/check-reporting/scripts/check_checklist_version.py +168 -0
  123. package/skills/check-reporting/scripts/check_framework_naming.py +206 -0
  124. package/skills/check-reporting/scripts/check_prisma_figure.py +209 -0
  125. package/skills/check-reporting/scripts/prisma_cascade_check.py +274 -0
  126. package/skills/check-reporting/skill.yml +41 -0
  127. package/skills/check-reporting/tests/fixtures/framework_bad.md +8 -0
  128. package/skills/check-reporting/tests/fixtures/framework_clean.md +7 -0
  129. package/skills/check-reporting/tests/test_checklist_fail_fast.sh +77 -0
  130. package/skills/check-reporting/tests/test_checklist_version.sh +72 -0
  131. package/skills/check-reporting/tests/test_framework_naming.sh +45 -0
  132. package/skills/check-reporting/tests/test_prisma_cascade.sh +104 -0
  133. package/skills/clean-data/SKILL.md +180 -0
  134. package/skills/clean-data/references/cleaning_patterns.md +299 -0
  135. package/skills/clean-data/references/profiling_template.py +304 -0
  136. package/skills/clean-data/scripts/check_structural_zero.py +174 -0
  137. package/skills/clean-data/skill.yml +35 -0
  138. package/skills/clean-data/tests/fixtures/smoking.csv +8 -0
  139. package/skills/clean-data/tests/test_structural_zero.sh +49 -0
  140. package/skills/cross-national/SKILL.md +264 -0
  141. package/skills/cross-national/skill.yml +37 -0
  142. package/skills/define-variables/SKILL.md +146 -0
  143. package/skills/define-variables/references/common_definitions.md +190 -0
  144. package/skills/define-variables/skill.yml +34 -0
  145. package/skills/define-variables/templates/variable_operationalization.md +64 -0
  146. package/skills/deidentify/SKILL.md +203 -0
  147. package/skills/deidentify/deidentify.py +1224 -0
  148. package/skills/deidentify/locales/_template.json +45 -0
  149. package/skills/deidentify/locales/au.json +43 -0
  150. package/skills/deidentify/locales/ca.json +44 -0
  151. package/skills/deidentify/locales/cn.json +47 -0
  152. package/skills/deidentify/locales/de.json +48 -0
  153. package/skills/deidentify/locales/fr.json +48 -0
  154. package/skills/deidentify/locales/in.json +48 -0
  155. package/skills/deidentify/locales/jp.json +48 -0
  156. package/skills/deidentify/locales/kr.json +48 -0
  157. package/skills/deidentify/locales/uk.json +45 -0
  158. package/skills/deidentify/locales/us.json +43 -0
  159. package/skills/deidentify/references/date_shift_guide.md +82 -0
  160. package/skills/deidentify/references/hipaa_18_identifiers.md +48 -0
  161. package/skills/deidentify/references/korean_phi_patterns.md +135 -0
  162. package/skills/deidentify/skill.yml +43 -0
  163. package/skills/deidentify/tests/README.md +26 -0
  164. package/skills/deidentify/tests/test_clean.csv +16 -0
  165. package/skills/deidentify/tests/test_edge_cases.csv +11 -0
  166. package/skills/deidentify/tests/test_phi_korean.csv +11 -0
  167. package/skills/design-ai-benchmarking/SKILL.md +214 -0
  168. package/skills/design-ai-benchmarking/references/benchmark_export_schema.json +69 -0
  169. package/skills/design-ai-benchmarking/references/elicitation_rubric_template.md +37 -0
  170. package/skills/design-ai-benchmarking/skill.yml +38 -0
  171. package/skills/design-study/SKILL.md +298 -0
  172. package/skills/design-study/skill.yml +33 -0
  173. package/skills/fill-icmje-coi/SKILL.md +216 -0
  174. package/skills/fill-icmje-coi/scripts/fill_icmje_coi.py +140 -0
  175. package/skills/fill-icmje-coi/skill.yml +35 -0
  176. package/skills/fill-icmje-coi/templates/icmje_coi_seed_synthetic.docx +0 -0
  177. package/skills/fill-protocol/SKILL.md +248 -0
  178. package/skills/fill-protocol/examples/example_irb_template.yaml +53 -0
  179. package/skills/fill-protocol/references/best_practices.md +121 -0
  180. package/skills/fill-protocol/scripts/doc_to_docx.py +111 -0
  181. package/skills/fill-protocol/scripts/fill_form.py +611 -0
  182. package/skills/fill-protocol/scripts/inspect_template.py +61 -0
  183. package/skills/fill-protocol/setup.sh +162 -0
  184. package/skills/fill-protocol/skill.yml +37 -0
  185. package/skills/find-cohort-gap/SKILL.md +309 -0
  186. package/skills/find-cohort-gap/references/cohort_profile_template.md +93 -0
  187. package/skills/find-cohort-gap/references/onepager_template.md +84 -0
  188. package/skills/find-cohort-gap/references/pattern_scoring_rubric.md +169 -0
  189. package/skills/find-cohort-gap/references/saturation_query_templates.md +143 -0
  190. package/skills/find-cohort-gap/skill.yml +35 -0
  191. package/skills/find-journal/POLICY.md +87 -0
  192. package/skills/find-journal/SKILL.md +340 -0
  193. package/skills/find-journal/references/journal_profiles/AJNR.md +29 -0
  194. package/skills/find-journal/references/journal_profiles/AJR.md +30 -0
  195. package/skills/find-journal/references/journal_profiles/Abdominal_Radiology.md +30 -0
  196. package/skills/find-journal/references/journal_profiles/Academic_Radiology.md +30 -0
  197. package/skills/find-journal/references/journal_profiles/Annals_of_Internal_Medicine.md +33 -0
  198. package/skills/find-journal/references/journal_profiles/Artificial_Intelligence_in_Medicine.md +28 -0
  199. package/skills/find-journal/references/journal_profiles/BMC_Medicine.md +31 -0
  200. package/skills/find-journal/references/journal_profiles/British_Journal_of_Radiology.md +39 -0
  201. package/skills/find-journal/references/journal_profiles/CVIR.md +30 -0
  202. package/skills/find-journal/references/journal_profiles/Chest.md +39 -0
  203. package/skills/find-journal/references/journal_profiles/Clinical_Radiology.md +30 -0
  204. package/skills/find-journal/references/journal_profiles/Clinical_and_Molecular_Hepatology.md +32 -0
  205. package/skills/find-journal/references/journal_profiles/Diabetes_Metabolism_Journal.md +36 -0
  206. package/skills/find-journal/references/journal_profiles/Diagnostic_and_Interventional_Radiology.md +32 -0
  207. package/skills/find-journal/references/journal_profiles/Endocrinology_and_Metabolism.md +37 -0
  208. package/skills/find-journal/references/journal_profiles/European_Journal_of_Preventive_Cardiology.md +39 -0
  209. package/skills/find-journal/references/journal_profiles/European_Radiology.md +29 -0
  210. package/skills/find-journal/references/journal_profiles/Hepatology_Communications.md +40 -0
  211. package/skills/find-journal/references/journal_profiles/Hepatology_International.md +37 -0
  212. package/skills/find-journal/references/journal_profiles/IEEE_JBHI.md +28 -0
  213. package/skills/find-journal/references/journal_profiles/IEEE_TMI.md +28 -0
  214. package/skills/find-journal/references/journal_profiles/INSI.md +29 -0
  215. package/skills/find-journal/references/journal_profiles/Investigative_Radiology.md +25 -0
  216. package/skills/find-journal/references/journal_profiles/JACC_Advances.md +41 -0
  217. package/skills/find-journal/references/journal_profiles/JACC_Asia.md +30 -0
  218. package/skills/find-journal/references/journal_profiles/JACR.md +28 -0
  219. package/skills/find-journal/references/journal_profiles/JAMA.md +40 -0
  220. package/skills/find-journal/references/journal_profiles/JAMA_Network_Open.md +30 -0
  221. package/skills/find-journal/references/journal_profiles/JCSM.md +39 -0
  222. package/skills/find-journal/references/journal_profiles/JKMS.md +32 -0
  223. package/skills/find-journal/references/journal_profiles/JMIR.md +29 -0
  224. package/skills/find-journal/references/journal_profiles/JMIR_Medical_Education.md +29 -0
  225. package/skills/find-journal/references/journal_profiles/JNIS.md +35 -0
  226. package/skills/find-journal/references/journal_profiles/JVIR.md +31 -0
  227. package/skills/find-journal/references/journal_profiles/Journal_of_Biomedical_Informatics.md +29 -0
  228. package/skills/find-journal/references/journal_profiles/Journal_of_Clinical_Endocrinology_and_Metabolism.md +40 -0
  229. package/skills/find-journal/references/journal_profiles/Journal_of_Magnetic_Resonance_Imaging.md +30 -0
  230. package/skills/find-journal/references/journal_profiles/Journal_of_Nuclear_Medicine.md +31 -0
  231. package/skills/find-journal/references/journal_profiles/Journal_of_Stroke.md +32 -0
  232. package/skills/find-journal/references/journal_profiles/KJR.md +38 -0
  233. package/skills/find-journal/references/journal_profiles/Korean_Circulation_Journal.md +38 -0
  234. package/skills/find-journal/references/journal_profiles/Korean_Journal_of_Internal_Medicine.md +36 -0
  235. package/skills/find-journal/references/journal_profiles/Lancet_Diabetes_and_Endocrinology.md +40 -0
  236. package/skills/find-journal/references/journal_profiles/Lancet_Gastroenterology_and_Hepatology.md +49 -0
  237. package/skills/find-journal/references/journal_profiles/Lancet_Infectious_Diseases.md +38 -0
  238. package/skills/find-journal/references/journal_profiles/Lancet_Neurology.md +39 -0
  239. package/skills/find-journal/references/journal_profiles/Lancet_Oncology.md +40 -0
  240. package/skills/find-journal/references/journal_profiles/Lancet_Psychiatry.md +38 -0
  241. package/skills/find-journal/references/journal_profiles/Lancet_Public_Health.md +30 -0
  242. package/skills/find-journal/references/journal_profiles/Lancet_Respiratory_Medicine.md +39 -0
  243. package/skills/find-journal/references/journal_profiles/Liver_International.md +33 -0
  244. package/skills/find-journal/references/journal_profiles/Medical_Image_Analysis.md +28 -0
  245. package/skills/find-journal/references/journal_profiles/NEJM.md +33 -0
  246. package/skills/find-journal/references/journal_profiles/Nature_Machine_Intelligence.md +31 -0
  247. package/skills/find-journal/references/journal_profiles/Nature_Medicine.md +39 -0
  248. package/skills/find-journal/references/journal_profiles/Neuroradiology.md +31 -0
  249. package/skills/find-journal/references/journal_profiles/Nutrition_Metabolism_and_Cardiovascular_Diseases.md +39 -0
  250. package/skills/find-journal/references/journal_profiles/PLOS_Medicine.md +32 -0
  251. package/skills/find-journal/references/journal_profiles/RYAI.md +28 -0
  252. package/skills/find-journal/references/journal_profiles/Radiology.md +29 -0
  253. package/skills/find-journal/references/journal_profiles/Skeletal_Radiology.md +31 -0
  254. package/skills/find-journal/references/journal_profiles/Stroke.md +37 -0
  255. package/skills/find-journal/references/journal_profiles/The_BMJ.md +31 -0
  256. package/skills/find-journal/references/journal_profiles/The_Lancet.md +31 -0
  257. package/skills/find-journal/references/journal_profiles/The_Lancet_Digital_Health.md +29 -0
  258. package/skills/find-journal/references/journal_profiles/World_Journal_of_Hepatology.md +53 -0
  259. package/skills/find-journal/references/journal_profiles/npj_Digital_Medicine.md +29 -0
  260. package/skills/find-journal/skill.yml +34 -0
  261. package/skills/fulltext-retrieval/SKILL.md +174 -0
  262. package/skills/fulltext-retrieval/fetch_oa.py +433 -0
  263. package/skills/fulltext-retrieval/pdf_to_md.py +160 -0
  264. package/skills/fulltext-retrieval/skill.yml +41 -0
  265. package/skills/generate-codebook/SKILL.md +155 -0
  266. package/skills/generate-codebook/references/codebook_schema.md +76 -0
  267. package/skills/generate-codebook/scripts/generate_codebook.py +278 -0
  268. package/skills/generate-codebook/skill.yml +35 -0
  269. package/skills/generate-codebook/tests/test_generate_codebook.sh +76 -0
  270. package/skills/grant-builder/SKILL.md +251 -0
  271. package/skills/grant-builder/skill.yml +34 -0
  272. package/skills/humanize/SKILL.md +251 -0
  273. package/skills/humanize/references/ai_patterns.md +571 -0
  274. package/skills/humanize/skill.yml +33 -0
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+ # Journal Profile: PLOS Medicine
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+
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+ ## Journal Identity
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+
5
+ - **Full name**: PLOS Medicine
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+ - **Abbreviation**: PLoS Med
7
+ - **Publisher**: Public Library of Science (PLOS)
8
+ - **ISSN**: 1549-1277 (print), 1549-1676 (online)
9
+ - **Frequency**: Continuous online publication (monthly issues)
10
+ - **Impact Factor**: ~10.5 (JCR 2023), ranked among top general medicine/public health journals
11
+ - **Open Access**: Full OA (APC ~$3,000; fee assistance available)
12
+ - **Acceptance rate**: ~10%
13
+ - **Peer review**: Single-blind; academic editors (section-specific) + external reviewers
14
+
15
+ ## Manuscript Types and Word Limits
16
+
17
+ | Type | Body Word Limit | Abstract | References | Figures/Tables |
18
+ |------|----------------|----------|------------|----------------|
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+ | Research Article | 3500 words | 300 words (structured) | No limit | No strict limit |
20
+ | Meta-Research Article | 3500 words | 300 words (structured) | No limit | No strict limit |
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+ | Systematic Review & Meta-Analysis | 4000 words | 300 words (structured) | No limit | No strict limit |
22
+ | Essay | 3000 words | ~150 words (unstructured) | No limit | 5 |
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+ | Perspective | 2000 words | None | 30 | 3 |
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+ | Guidelines and Guidance | 4000 words | 300 words | No limit | No strict limit |
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+
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+ Word counts exclude abstract, references, and figure legends. PLOS has no strict reference or figure caps but encourages conciseness.
27
+
28
+ ---
29
+
30
+ ## Abstract Requirements
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+
32
+ **Structured abstract, 300 words maximum (Research Articles):**
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+
34
+ ```
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+ Background: [Context, existing evidence, knowledge gap]
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+ Methods and Findings: [Study design, setting, participants, dates,
37
+ primary and secondary outcomes, key results with effect sizes,
38
+ CIs, P values, and study limitations — yes, limitations go here]
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+ Conclusions: [Main conclusion, implications for practice or policy]
40
+ ```
41
+
42
+ **Critical**: PLOS Medicine uses a 3-heading abstract (Background, Methods and Findings, Conclusions). Uniquely, the "Methods and Findings" section must include key study limitations. The abstract should mention the study's limitations before the Conclusions heading.
43
+
44
+ ---
45
+
46
+ ## Required Sections (Research Article)
47
+
48
+ ### 1. Author Summary
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+
50
+ A 150-200 word plain-language summary (distinct from abstract), structured as:
51
+ - **Why Was This Study Done?** (2-3 bullet points)
52
+ - **What Did the Researchers Do and Find?** (2-3 bullet points)
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+ - **What Do These Findings Mean?** (2-3 bullet points including limitations)
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+
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+ This is read by non-specialists and media; avoid jargon.
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+
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+ ### 2. Body Sections
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+
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+ 1. **Introduction** — brief (3-4 paragraphs); state the gap and end with study aim
60
+ 2. **Methods**
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+ - Ethics statement (first paragraph): IRB/ethics approval, informed consent
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+ - Study design: cite reporting guideline used (STROBE, CONSORT, PRISMA, etc.)
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+ - Setting and participants: dates of enrollment, inclusion/exclusion criteria
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+ - Variables and outcomes: primary and secondary defined
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+ - Statistical analysis: pre-specified plan, software, handling of confounders and missing data
66
+ - Prospective protocol or analysis plan: registration or pre-registration encouraged
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+ 3. **Results** — begin with participant flow; report primary outcome first
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+ 4. **Discussion** — begin with key findings summary; include explicit limitations paragraph; end with implications for policy/practice
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+
70
+ ### 3. Data Availability Statement
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+
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+ Mandatory. Data must be publicly available or authors must explain restrictions. PLOS enforces data sharing more strictly than most journals.
73
+
74
+ ---
75
+
76
+ ## Statistical Reporting
77
+
78
+ - Report exact P values (e.g., P = 0.03); use P < 0.001 below that threshold.
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+ - 95% CI required for all primary outcomes.
80
+ - Effect sizes with units (absolute and relative measures).
81
+ - For observational studies: report adjusted and unadjusted estimates; specify confounder selection method.
82
+ - DAG (directed acyclic graph) encouraged for causal inference studies.
83
+ - For meta-analyses: heterogeneity (I², tau²), publication bias assessment, sensitivity/subgroup analyses.
84
+ - Multiple comparisons: state correction method or declare as exploratory.
85
+ - Missing data: report proportion missing; describe handling (complete case, imputation).
86
+ - Bayesian analyses accepted with prior justification.
87
+ - Statistical software and version must be identified.
88
+ - For prediction models: discrimination (AUC) and calibration required; TRIPOD checklist.
89
+ - Reproducibility: analysis code sharing strongly encouraged.
90
+
91
+ ---
92
+
93
+ ## Figures
94
+
95
+ - **No strict maximum** — but reviewers may request reduction if excessive
96
+ - **Resolution**: 300 DPI minimum
97
+ - **Format**: TIFF or EPS preferred; PDF acceptable
98
+ - **Color**: Free (online-only journal)
99
+ - **Supporting Information**: Unlimited supplementary figures, tables, methods, datasets
100
+ - **Figure panels**: Label A, B, C with self-explanatory legends
101
+ - **Flow diagrams**: CONSORT, PRISMA, or STARD as appropriate
102
+ - **Data visualization**: Encourage informative plots over simple bar charts
103
+
104
+ ---
105
+
106
+ ## Common Rejection Reasons
107
+
108
+ 1. **Insufficient general medical/public health relevance** — findings must matter beyond one specialty or setting
109
+ 2. **Scope mismatch** — pure clinical/subspecialty work without broader implications
110
+ 3. **Methodological concerns** — inadequate adjustment for confounders, selection bias, or missing data
111
+ 4. **Reporting guideline non-compliance** — EQUATOR checklists strictly required
112
+ 5. **No data availability** — PLOS enforces open data; no plan = desk reject
113
+ 6. **Overclaiming in abstract** — limitations must be stated in abstract (not just Discussion)
114
+ 7. **Insufficient novelty for the field** — must advance knowledge meaningfully
115
+
116
+ ---
117
+
118
+ ## Cover Letter
119
+
120
+ Must include:
121
+ - Brief description of the study and its significance (2-3 sentences)
122
+ - Statement of relevance to PLOS Medicine readership
123
+ - Confirmation that the manuscript is not under consideration elsewhere
124
+ - Data availability confirmation
125
+ - Any relevant competing interests
126
+ - Suggested academic editor or section (optional)
127
+
128
+ ---
129
+
130
+ ## AI Writing Disclosure Policy
131
+ - **Requirement level:** Required (Permissive)
132
+ - **Permitted scope:** All tasks permitted — AI/LLM tools may be used for writing, editing, data analysis, code generation, and other manuscript preparation tasks; AI cannot be listed as authors; authors retain full responsibility for accuracy and integrity of all content including AI-generated text
133
+ - **Disclosure location:** Methods (or appropriate section) — must disclose the AI tool name, version, and how it was used; describe what content was generated or edited by AI; follows PLOS-wide AI policy
134
+ - **AI-generated images:** Permitted with disclosure — AI-generated or AI-manipulated images must be explicitly disclosed; provide tool name, version, and prompts used; images must not misrepresent data
135
+ - **Policy URL:** https://journals.plos.org/plosmedicine/s/submission-guidelines#loc-ai-assisted-technologies
136
+
137
+ ---
138
+
139
+ ## Author Guidelines URL
140
+
141
+ https://journals.plos.org/plosmedicine/s/submission-guidelines
142
+
143
+ ---
144
+
145
+ ## Positioning
146
+
147
+ | Feature | PLOS Medicine | JAMA Netw Open | BMC Medicine | BMJ Open |
148
+ |---------|--------------|---------------|--------------|----------|
149
+ | IF | ~10.5 | ~13.8 | ~7.5 | ~3.0 |
150
+ | OA model | Full OA | Full OA | Full OA | Full OA |
151
+ | APC | ~$3,000 | ~$3,500 | ~$3,690 | ~$2,590 |
152
+ | Abstract style | 3-heading (limits in abstract) | 7-heading (JAMA format) | Structured (varied) | Structured (varied) |
153
+ | Unique feature | Author Summary + open data | JAMA Network prestige | Fast review | High acceptance |
154
+ | MA/SR | Strong fit | Good fit | Strong fit | Acceptable |
155
+ | AI policy | Permissive (all uses OK) | Moderate (editing only) | ICMJE-standard | ICMJE-standard |
156
+ | Global health | Core strength | Accepted | Good | Good |
157
+
158
+ PLOS Medicine is appropriate when:
159
+ - Study has clear public health or health policy implications
160
+ - Systematic review or meta-analysis on a broadly relevant topic
161
+ - Meta-research (research on research, reporting quality, publication bias)
162
+ - Global health study with population-level impact
163
+ - Study requiring permissive AI disclosure (AI-assisted analysis integral to methods)
164
+ - Data sharing is fully possible (no proprietary restrictions)
165
+
166
+ Not appropriate for: narrow subspecialty clinical studies, technical AI methodology without health impact, studies where data cannot be shared, case reports.
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1
+ # Radiology: Artificial Intelligence (RYAI)
2
+
3
+ ## Journal Identity
4
+
5
+ - **Full name**: Radiology: Artificial Intelligence
6
+ - **Abbreviation**: Radiol Artif Intell
7
+ - **Publisher**: Radiological Society of North America (RSNA)
8
+ - **ISSN**: 2638-6100
9
+ - **Frequency**: Bimonthly
10
+ - **Impact Factor**: ~8.1 (2024)
11
+
12
+ ## Manuscript Types and Word Limits
13
+
14
+ | Type | Abstract | Manuscript Body | Figures | Tables |
15
+ |------|----------|----------------|---------|--------|
16
+ | Original Research | 250 | 3500 | 7 | 5 |
17
+ | Technical Note | 250 | 1500 | 4 | 3 |
18
+ | Review Article | 250 | 5000 | 10 | 5 |
19
+ | Letter to Editor | none | 500 | 1 | 1 |
20
+
21
+ Word counts exclude abstract, references, figure legends, and tables.
22
+
23
+ ## Abstract Format
24
+
25
+ Structured with four headings:
26
+ 1. **Purpose**
27
+ 2. **Materials and Methods**
28
+ 3. **Results**
29
+ 4. **Conclusion**
30
+
31
+ Maximum 250 words. Must be self-contained.
32
+
33
+ ## Citation Style
34
+
35
+ - Vancouver (numbered) style.
36
+ - Numbered sequentially in order of first appearance in text.
37
+ - Use superscript numbers in the manuscript body.
38
+ - Format: Author(s). Title. Journal Abbreviation. Year;Vol(Issue):Pages.
39
+ - List all authors if 6 or fewer; if 7+, list first 3 followed by "et al."
40
+
41
+ ## Keywords
42
+
43
+ - 3-5 keywords required.
44
+ - MeSH terms preferred.
45
+ - Listed alphabetically.
46
+
47
+ ## Required Elements
48
+
49
+ ### For All Manuscripts
50
+ - **Title page**: title, short title (50 chars), authors with affiliations, corresponding author, word count, number of figures/tables/references.
51
+ - **Key Points**: Not required (unlike AJR).
52
+ - **Data Availability Statement**: Required. Must specify whether data and code are available and under what conditions.
53
+ - **Author Contributions**: CRediT taxonomy required.
54
+ - **Conflict of Interest Disclosures**: Required for all authors.
55
+ - **Funding**: Grant numbers and funding sources.
56
+
57
+ ### For AI Studies (Mandatory)
58
+ - **CLAIM Checklist**: Must be completed and submitted as supplemental material for any study involving AI/ML in medical imaging.
59
+ - **AI Disclosure in Methods**: Must describe any use of AI tools in the research process (data collection, analysis, writing assistance). Specific tools and versions must be named.
60
+ - **AI Disclosure in Acknowledgments**: Must acknowledge AI writing assistance if used, specifying the tool and its role.
61
+ - **Code Availability**: Strongly encouraged. GitHub repository or equivalent.
62
+ - **Model Card**: Encouraged for studies introducing new AI models.
63
+
64
+ ## Reporting Guidelines
65
+
66
+ Match study type to required checklist:
67
+
68
+ | Study Type | Required Checklist |
69
+ |------------|-------------------|
70
+ | Diagnostic accuracy (AI) | STARD-AI |
71
+ | Prediction model | TRIPOD+AI |
72
+ | Any AI study in imaging | CLAIM 2024 |
73
+ | Randomized trial with AI | CONSORT-AI |
74
+ | Systematic review of AI | PRISMA 2020 |
75
+
76
+ Multiple checklists may apply (e.g., CLAIM + STARD-AI for a diagnostic AI study).
77
+
78
+ ## Supplemental Materials
79
+
80
+ - Strongly encouraged.
81
+ - Can include additional tables, figures, methods details, code.
82
+ - Supplemental material is peer-reviewed.
83
+ - Common supplements: expanded methods, additional performance metrics, subgroup analyses, CLAIM checklist.
84
+
85
+ ## Formatting Notes
86
+
87
+ - Double-spaced, 12-point font.
88
+ - Line numbers required on the manuscript.
89
+ - Pages numbered consecutively.
90
+ - Abbreviations defined at first use in both abstract and body (independently).
91
+ - SI units preferred; conventional units acceptable with SI in parentheses.
92
+
93
+ ## Statistical Reporting
94
+
95
+ - Report exact p-values (e.g., P = .034); use P < .001 only when value is below that threshold. Never report only "P < .05".
96
+ - 95% CI required for all primary performance metrics (AUC, sensitivity, specificity, accuracy).
97
+ - For AI model comparisons: use DeLong test for AUC comparison; McNemar test for paired sensitivity/specificity.
98
+ - Calibration must accompany discrimination for prediction models: calibration plot + Hosmer-Lemeshow or calibration slope/intercept.
99
+ - Subgroup performance metrics required for fairness assessment (CLAIM requirement).
100
+ - Effect sizes with units; avoid "significant" without accompanying statistics.
101
+ - Statistical software and version must be named in Methods.
102
+ - Statistical review for all accepted manuscripts.
103
+
104
+ ## Review Process
105
+
106
+ - Single-blind peer review.
107
+ - Typical first decision: 4-6 weeks.
108
+ - Revisions usually due within 60 days.
109
+
110
+ ## Special Considerations for Education-Research Manuscripts
111
+
112
+ - Paper 1 (S5 Multi-agent Validation) and Paper 2 (MLLM Image Reliability) are strong fits for RYAI.
113
+ - CLAIM checklist is mandatory for both.
114
+ - Emphasis on reproducibility: pipeline code, prompt templates, and evaluation criteria should be described in detail or provided as supplements.
115
+ - For LLM/MLLM studies: model version, API date, temperature settings, prompt text (or reference to supplement) must be reported in Methods.
116
+
117
+ ---
118
+
119
+ ## AI Writing Disclosure Policy
120
+ - **Requirement level:** Required
121
+ - **Permitted scope:** Language editing only — AI/LLM tools may assist with language editing and manuscript preparation but cannot be listed as authors; must not generate scientific content, interpret data, or draw conclusions
122
+ - **Disclosure location:** Methods + Acknowledgments — must describe the AI tool name, version, and specific role in both the Methods section (under "AI Disclosure in Methods") and Acknowledgments (under "AI Disclosure in Acknowledgments"); this is distinct from AI used as the research subject
123
+ - **AI-generated images:** Banned — AI-generated or AI-manipulated images in figures are not permitted; AI models studied as research subjects must follow CLAIM checklist reporting
124
+ - **Policy URL:** https://pubs.rsna.org/page/ai-policy
@@ -0,0 +1,173 @@
1
+ # Journal Profile: Radiology (RSNA)
2
+
3
+ ## Basic Information
4
+
5
+ - **Publisher:** Radiological Society of North America (RSNA)
6
+ - **Impact Factor:** ~19.0 (2023–2024) — flagship journal of radiology
7
+ - **Scope:** Original research in diagnostic and interventional radiology; any imaging modality; clinical and translational
8
+ - **Sister journals:** Radiology:AI (AI-specific), Radiology:Cardiothoracic, RadioGraphics (educational)
9
+ - **Open Access:** Optional (RSNA Open Access); standard subscription model
10
+ - **Language:** American English
11
+
12
+ ---
13
+
14
+ ## Manuscript Types and Word Limits
15
+
16
+ | Type | Body Word Limit | Abstract | Figures | References |
17
+ |------|----------------|----------|---------|------------|
18
+ | Original Research | 3000 words | 250 words | **6 (strictly enforced)** | 40 |
19
+ | Review | 4000 words | 250 words | 8 | 60 |
20
+ | Technical Developments | 3000 words | 250 words | 6 | 30 |
21
+ | Case Reports | 1000 words | None | 4 | 8 |
22
+ | Letters | 500 words | None | 1 | 5 |
23
+
24
+ **⚠️ 6-figure limit is strictly enforced.** Supplementary figures are allowed and should be used for additional cases, subgroup analyses, and detailed methods.
25
+
26
+ ---
27
+
28
+ ## Abstract Requirements
29
+
30
+ **Structured abstract, 250 words maximum:**
31
+
32
+ ```
33
+ Background: [Clinical problem and why it matters — 1–2 sentences]
34
+ Purpose: [Specific aims — usually 1 sentence]
35
+ Materials and Methods: [Design, population, exposure/index test, outcome,
36
+ statistical analysis]
37
+ Results: [Primary results with statistics, 95% CI, exact p-value;
38
+ secondary results briefly]
39
+ Conclusion: [Main conclusion — 1–2 sentences]
40
+ ```
41
+
42
+ ---
43
+
44
+ ## Required Journal-Specific Elements
45
+
46
+ ### 1. Summary Statement
47
+
48
+ A single sentence (≤ 50 words) that captures the essential finding. Placed immediately before the abstract.
49
+
50
+ "[Index test/intervention] [demonstrated/showed/reduced] [outcome] in [population], suggesting [clinical implication]."
51
+
52
+ This is the first thing an editor reads. Make it compelling and specific.
53
+
54
+ ### 2. Advances in Knowledge
55
+
56
+ 3 bullet points, placed at the end of the manuscript (after Discussion, before References). Each bullet ≤ 2 sentences.
57
+
58
+ Cover: (a) methodological advance, (b) main clinical finding with effect size, (c) implication.
59
+
60
+ Example:
61
+ ```
62
+ Advances in Knowledge
63
+ ■ A deep learning model for detecting pulmonary embolism on CT angiography
64
+ was trained on 5000 examinations across three institutions.
65
+ ■ The model achieved a sensitivity of 91% (95% CI: 87–94%) and specificity
66
+ of 96% (95% CI: 93–98%), comparable to expert radiologists.
67
+ ■ This externally validated model may support radiologist workflow in high-
68
+ volume centers by flagging urgent examinations.
69
+ ```
70
+
71
+ ---
72
+
73
+ ## Required Sections (Original Research)
74
+
75
+ 1. **Introduction** — brief (200–300 words); end with explicit purpose statement
76
+ 2. **Materials and Methods**
77
+ - Ethics: IRB number + consent or waiver statement
78
+ - Study Design: state prospective or retrospective
79
+ - Participants: inclusion/exclusion criteria, flowchart
80
+ - Image Analysis: technique, readers, blinding
81
+ - Statistical Analysis: software (R or SAS; version), tests, significance threshold
82
+ 3. **Results** — primary outcome first, then secondary
83
+ 4. **Discussion** — 3–4 paragraphs; Limitations as penultimate paragraph
84
+ 5. **Conclusion** — brief (1–2 sentences)
85
+ 6. **Advances in Knowledge** — 3 bullets (see above)
86
+
87
+ ---
88
+
89
+ ## Statistical Reporting
90
+
91
+ Radiology endorses **SAMPL guidelines** (Statistical Analyses and Methods in the Published Literature):
92
+ - Report exact p-values (P = .034), never P < .05
93
+ - 95% CI for all primary outcomes
94
+ - Effect sizes with units
95
+ - NNT/NNH for clinical outcomes where applicable
96
+ - Diagnostic accuracy: sensitivity, specificity, AUC, all with 95% CI
97
+
98
+ ---
99
+
100
+ ## Differentiation from Radiology:AI
101
+
102
+ | Dimension | Radiology | Radiology:AI |
103
+ |-----------|-----------|-------------|
104
+ | Focus | Clinical radiology (any modality) | AI/ML methodology and validation |
105
+ | AI papers | Only if AI is validated clinically | AI at any development stage |
106
+ | Required novelty | Large prospective or multi-center | Can be single-center |
107
+ | Reporting guideline | SAMPL | CLAIM |
108
+ | Acceptance bar | ~5–8% | ~15–20% |
109
+ | Impact factor | ~19 | ~8 |
110
+
111
+ **Use Radiology if:** AI is fully clinically validated, study is large/multi-center, primary novelty is clinical not technical.
112
+ **Use Radiology:AI if:** Paper is primarily about AI methodology, training, validation, or comparison.
113
+
114
+ ---
115
+
116
+ ## Figures
117
+
118
+ - **Maximum 6 figures** — plan carefully; multi-panel counts as one figure
119
+ - **Resolution:** 300 DPI (600 DPI for line art)
120
+ - **Format:** EPS or TIFF
121
+ - **Figure panels:** Label A, B, C, etc.; panels should be self-explanatory from legend
122
+ - **Supplementary figures:** Unlimited; use freely for additional cases, ROC curves, calibration plots
123
+
124
+ ---
125
+
126
+ ## Common Rejection Reasons
127
+
128
+ 1. **Below novelty threshold** — Radiology expects findings that change practice or open new research directions; replication studies rarely accepted unless very large-scale
129
+ 2. **Figure limit exceeded** — submitting 8 figures will cause desk rejection
130
+ 3. **Missing Summary statement or Advances in Knowledge** — reviewed immediately on submission
131
+ 4. **Underpowered study** — sample sizes of N < 200 are unusual for Radiology original research; N < 100 almost never accepted
132
+ 5. **Retrospective single-center** — not automatically rejected, but must provide very strong novelty
133
+ 6. **Overclaiming in Abstract** — editors are sensitive to "first," "largest," "gold standard" language without justification
134
+ 7. **Statistical reporting errors** — Radiology statistical editors check carefully
135
+
136
+ ---
137
+
138
+ ## Cover Letter
139
+
140
+ Must include:
141
+ - Summary statement (same as in manuscript)
142
+ - Statement that all authors approved the submission
143
+ - Disclosure of any related manuscripts under review
144
+ - Patient consent/IRB statement (brief)
145
+
146
+ Suggested reviewers: 3–5 names with email addresses (RSNA specifically encourages this).
147
+
148
+ ---
149
+
150
+ ## Author Guidelines URL
151
+
152
+ https://pubs.rsna.org/page/radiology/submission-guidelines
153
+
154
+ ---
155
+
156
+ ## Positioning
157
+
158
+ Radiology is appropriate when:
159
+ - Large prospective or multi-center study (N ≥ 500 preferred)
160
+ - Practice-changing finding in major disease category (lung cancer, stroke, liver disease)
161
+ - Head-to-head comparison demonstrating superiority of a new modality/technique
162
+ - Landmark AI study with external validation and clinical endpoint
163
+
164
+ Not appropriate for: small retrospective series, incremental technical improvements, studies limited to a rare condition (unless first of its kind with major impact).
165
+
166
+ ---
167
+
168
+ ## AI Writing Disclosure Policy
169
+ - **Requirement level:** Required
170
+ - **Permitted scope:** Language editing only — AI/LLM tools may assist with language polishing and editing but cannot be listed as authors and must not generate scientific content, interpret data, or draw conclusions
171
+ - **Disclosure location:** Methods + Acknowledgments — describe the AI tool, version, and how it was used; RSNA requires disclosure in both the Methods section and Acknowledgments
172
+ - **AI-generated images:** Banned — AI-generated or AI-manipulated images in figures are not permitted; AI use in image analysis as part of the study methodology is acceptable and must be described in Methods
173
+ - **Policy URL:** https://pubs.rsna.org/page/ai-policy
@@ -0,0 +1,135 @@
1
+ # Journal Profile: Skeletal Radiology
2
+
3
+ ## Journal Identity
4
+
5
+ - **Full name**: Skeletal Radiology
6
+ - **Abbreviation**: Skeletal Radiol
7
+ - **Publisher**: Springer Nature (International Skeletal Society)
8
+ - **ISSN**: 0364-2348 (print), 1432-2161 (online)
9
+ - **Frequency**: Monthly (12 issues/year)
10
+ - **Impact Factor**: ~2.1 (JCR 2023)
11
+ - **Open Access**: Hybrid (Springer transformative agreements may cover OA)
12
+ - **Acceptance rate**: ~30-35%
13
+ - **Peer review**: Single-blind; typically 2 reviewers
14
+
15
+ ## Manuscript Types and Word Limits
16
+
17
+ | Type | Body Word Limit | Abstract | References | Figures/Tables |
18
+ |------|----------------|----------|------------|----------------|
19
+ | Scientific Article | 3500 words | 250 words (structured) | 35 | 6 |
20
+ | Review Article | 5000 words | 250 words | 60 | 10 |
21
+ | Case Report | 1500 words | 150 words (unstructured) | 10 | 6 |
22
+ | Technical Report | 2000 words | 150 words (unstructured) | 15 | 4 |
23
+ | Pictorial Essay | 3000 words | 200 words | 20 | 12 |
24
+ | Test Yourself | 1000 words | None | 5 | 6 |
25
+ | Letter to the Editor | 500 words | None | 5 | 1 |
26
+
27
+ Word counts exclude abstract, references, tables, and figure legends.
28
+
29
+ ---
30
+
31
+ ## Abstract Requirements
32
+
33
+ **Structured abstract for Scientific Articles, 250 words maximum:**
34
+
35
+ ```
36
+ Objective: [Study aim]
37
+ Materials and Methods: [Design, population, imaging, analysis]
38
+ Results: [Key findings with statistics]
39
+ Conclusion: [Main conclusion — 1-2 sentences]
40
+ ```
41
+
42
+ **Unstructured abstract for Case Reports and Technical Reports, 150 words.**
43
+
44
+ ---
45
+
46
+ ## Required Sections (Scientific Article)
47
+
48
+ 1. **Introduction** — clinical context, gap, purpose (2-3 paragraphs)
49
+ 2. **Materials and Methods**
50
+ - Study Design: IRB, retrospective/prospective
51
+ - Patient Population: inclusion/exclusion, time period
52
+ - Imaging Protocol: modality, scanner, sequence parameters
53
+ - Image Analysis: readers, blinding, measurement methods
54
+ - Statistical Analysis: software, tests
55
+ 3. **Results** — demographics, imaging findings, diagnostic performance
56
+ 4. **Discussion** — comparison with literature, clinical implications, limitations
57
+ 5. **Conclusion**
58
+
59
+ ---
60
+
61
+ ## Statistical Reporting
62
+
63
+ - Report exact p-values; use p < 0.001 below that threshold.
64
+ - 95% CI for primary outcomes.
65
+ - For diagnostic accuracy: sensitivity, specificity, AUC with 95% CI.
66
+ - Inter-reader agreement: ICC with model/type, or kappa with weighting scheme.
67
+ - For measurement studies: Bland-Altman with limits of agreement, SEM, MDC.
68
+ - Statistical software and version must be identified.
69
+
70
+ ---
71
+
72
+ ## MSK-Specific Requirements
73
+
74
+ ### Imaging Protocol
75
+
76
+ - MRI: field strength, coil, sequences (PD FS, T1, T2, contrast-enhanced), slice thickness
77
+ - CT: scanner, kVp, reconstruction kernel, reformats
78
+ - US: transducer frequency, dynamic maneuvers
79
+ - Radiography: projections, positioning
80
+
81
+ ### Anatomy and Classification
82
+
83
+ Use standardized MSK terminology and classification systems:
84
+ - Fractures: AO/OTA classification
85
+ - Tumors: WHO classification with imaging-pathology correlation
86
+ - Arthritis: grading systems (Kellgren-Lawrence, OMERACT for US)
87
+ - Sports injuries: standardized grading (e.g., muscle injury: British Athletics classification)
88
+
89
+ ---
90
+
91
+ ## Figures
92
+
93
+ - **Maximum 6 figures/tables** for scientific articles; **12 for Pictorial Essays**
94
+ - **Resolution**: 300 DPI minimum
95
+ - **Format**: TIFF, EPS, JPEG
96
+ - **Color**: Free online
97
+ - **MSK imaging conventions**: appropriate window/level, anatomical annotations, comparison with contralateral side when relevant
98
+
99
+ ---
100
+
101
+ ## Common Rejection Reasons
102
+
103
+ 1. **Overlap with AJR or Radiology MSK content** — needs unique MSK-specific contribution
104
+ 2. **Case reports too common** — must be genuinely rare or educationally unique
105
+ 3. **Missing imaging protocol** — essential for MSK imaging reproducibility
106
+ 4. **Small sample for diagnostic accuracy** — needs enough cases per pathology category
107
+ 5. **No inter-reader agreement** for subjective findings
108
+
109
+ ---
110
+
111
+ ## Cover Letter
112
+
113
+ Should include:
114
+ - Relevance to MSK radiology
115
+ - Key finding summary
116
+ - Statement of originality
117
+
118
+ ---
119
+
120
+ ## Author Guidelines URL
121
+
122
+ https://www.springer.com/journal/256/submission-guidelines
123
+
124
+ ---
125
+
126
+ ## Positioning
127
+
128
+ Skeletal Radiology is appropriate when:
129
+ - MSK imaging study (tumor, sports, arthritis, metabolic bone disease)
130
+ - AI applied to MSK imaging with diagnostic evaluation
131
+ - Case report of rare MSK pathology with high-quality imaging
132
+ - MRI technique validation for MSK application
133
+ - Pictorial essay on MSK imaging topic
134
+
135
+ Not appropriate for: non-MSK imaging, purely surgical outcomes without imaging focus, orthopedic biomechanics without imaging component.