valuesets 0.3.1__py3-none-any.whl

valuesets/schema/health/vaccination.yaml

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+name: valuesets-vaccination
+title: valuesets-vaccination
+description: Vaccination-related value sets
+# Test comment to trigger validation hook
+id: https://w3id.org/valuesets/health/vaccination
+prefixes:
+  # linkml_common: https://w3id.org/valuesets/
+  linkml: https://w3id.org/linkml/
+  biolink: https://w3id.org/biolink/
+  schema: http://schema.org/
+  NCIT: http://purl.obolibrary.org/obo/NCIT_
+  VO: http://purl.obolibrary.org/obo/VO_
+  valuesets: https://w3id.org/valuesets/
+default_prefix: valuesets
+slots:
+  vaccination_status:
+    description: The vaccination status of an individual
+    range: VaccinationStatusEnum
+  vaccination_periodicity:
+    description: The periodicity or frequency of vaccination
+    range: VaccinationPeriodicityEnum
+  vaccine_category:
+    description: The broad category or type of vaccine
+    range: VaccineCategoryEnum
+enums:
+  VaccinationStatusEnum:
+    description: The vaccination status of an individual
+    permissible_values:
+      VACCINATED:
+        description: A status indicating that an individual has received a vaccination
+        meaning: NCIT:C28385
+      NOT_VACCINATED:
+        description: A status indicating that an individual has not received any of the required vaccinations
+        meaning: NCIT:C183125
+      FULLY_VACCINATED:
+        description: A status indicating that an individual has received all the required vaccinations
+        meaning: NCIT:C183123
+      PARTIALLY_VACCINATED:
+        description: A status indicating that an individual has received some of the required vaccinations
+        meaning: NCIT:C183124
+      BOOSTER:
+        description: A status indicating that an individual has received a booster vaccination
+        meaning: NCIT:C28320
+      UNVACCINATED:
+        description: An organismal quality that indicates an organism is unvaccinated with any vaccine
+        meaning: VO:0001377
+      UNKNOWN:
+        description: The vaccination status is not known
+        meaning: NCIT:C17998
+  VaccinationPeriodicityEnum:
+    description: The periodicity or frequency of vaccination
+    permissible_values:
+      SINGLE_DOSE:
+        description: A vaccination regimen requiring only one dose
+      ANNUAL:
+        description: Vaccination occurring once per year
+        meaning: NCIT:C54647
+      SEASONAL:
+        description: Vaccination occurring seasonally (e.g., for influenza)
+      BOOSTER:
+        description: A second or later vaccine dose to maintain immune response
+        meaning: NCIT:C28320
+      PRIMARY_SERIES:
+        description: The initial series of vaccine doses
+      PERIODIC:
+        description: Vaccination occurring at regular intervals
+      ONE_TIME:
+        description: A vaccination given only once in a lifetime
+      AS_NEEDED:
+        description: Vaccination given as needed based on exposure risk or other factors
+  VaccineCategoryEnum:
+    description: The broad category or type of vaccine
+    permissible_values:
+      LIVE_ATTENUATED_VACCINE:
+        description: A vaccine made from microbes that have been weakened in the laboratory
+        meaning: VO:0000367
+      INACTIVATED_VACCINE:
+        description: A preparation of killed microorganisms intended to prevent infectious disease
+        meaning: NCIT:C29694
+      CONJUGATE_VACCINE:
+        description: A vaccine created by covalently attaching an antigen to a carrier protein
+        meaning: NCIT:C1455
+      MRNA_VACCINE:
+        description: A vaccine based on mRNA that encodes the antigen of interest
+        meaning: NCIT:C172787
+      DNA_VACCINE:
+        description: A vaccine using DNA to produce protein that promotes immune responses
+        meaning: NCIT:C39619
+      PEPTIDE_VACCINE:
+        description: A vaccine based on synthetic peptides
+        meaning: NCIT:C1752
+      VIRAL_VECTOR:
+        description: A vaccine using a modified virus as a delivery system
+      SUBUNIT:
+        description: A vaccine containing purified pieces of the pathogen
+      TOXOID:
+        description: A vaccine made from a toxin that has been made harmless
+      RECOMBINANT:
+        description: A vaccine produced using recombinant DNA technology
+license: MIT
+see_also:
+- https://linkml.github.io/valuesets

valuesets/schema/health.yaml

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+name: valuesets-health
+title: valuesets-health
+description: General health-related value sets
+id: https://w3id.org/valuesets/health
+prefixes:
+  # linkml_common: https://w3id.org/valuesets/
+  linkml: https://w3id.org/linkml/
+  biolink: https://w3id.org/biolink/
+  schema: http://schema.org/
+  NCIT: http://purl.obolibrary.org/obo/NCIT_
+  fhir: http://hl7.org/fhir/
+  valuesets: https://w3id.org/valuesets/
+default_prefix: valuesets
+slots:
+  vital_status:
+    description: The vital status of a person or organism
+    range: VitalStatusEnum
+enums:
+  VitalStatusEnum:
+    description: The vital status of a person or organism
+    permissible_values:
+      ALIVE:
+        description: The person is living
+        meaning: NCIT:C37987
+      DECEASED:
+        description: The person has died
+        meaning: NCIT:C28554
+        title: Dead
+      UNKNOWN:
+        description: The vital status is not known
+        meaning: NCIT:C17998
+      PRESUMED_ALIVE:
+        description: The person is presumed to be alive based on available information
+      PRESUMED_DECEASED:
+        description: The person is presumed to be deceased based on available information
+license: MIT
+see_also:
+- https://linkml.github.io/valuesets

valuesets/schema/healthcare.yaml

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+name: valuesets-healthcare
+title: valuesets-healthcare
+description: Common Data Model Elements
+id: https://w3id.org/valuesets/healthcare
+prefixes:
+  # linkml_common: https://w3id.org/valuesets/
+  linkml: https://w3id.org/linkml/
+  biolink: https://w3id.org/biolink/
+  schema: http://schema.org/
+  PATO: http://purl.obolibrary.org/obo/PATO_
+  fhir: http://hl7.org/fhir/
+  omopschema: http://example.org/omop/
+  valuesets: https://w3id.org/valuesets/
+default_prefix: valuesets
+slots:
+  healthcare_encounter_classification:
+    description: The healthcare encounter classification classification
+    range: HealthcareEncounterClassification
+enums:
+  HealthcareEncounterClassification:
+    permissible_values:
+      Inpatient Visit:
+        description: Person visiting hospital, at a Care Site, in bed, for duration of more than one day, with physicians
+          and other Providers permanently available to deliver service around the clock
+      Emergency Room Visit:
+        description: Person visiting dedicated healthcare institution for treating emergencies, at a Care Site, within one
+          day, with physicians and Providers permanently available to deliver service around the clock
+      Emergency Room and Inpatient Visit:
+        description: Person visiting ER followed by a subsequent Inpatient Visit, where Emergency department is part of hospital,
+          and transition from the ER to other hospital departments is undefined
+      Non-hospital institution Visit:
+        description: Person visiting dedicated institution for reasons of poor health, at a Care Site, long-term or permanently,
+          with no physician but possibly other Providers permanently available to deliver service around the clock
+      Outpatient Visit:
+        description: Person visiting dedicated ambulatory healthcare institution, at a Care Site, within one day, without
+          bed, with physicians or medical Providers delivering service during Visit
+      Home Visit:
+        description: Provider visiting Person, without a Care Site, within one day, delivering service
+      Telehealth Visit:
+        description: Patient engages with Provider through communication media
+      Pharmacy Visit:
+        description: Person visiting pharmacy for dispensing of Drug, at a Care Site, within one day
+      Laboratory Visit:
+        description: Patient visiting dedicated institution, at a Care Site, within one day, for the purpose of a Measurement.
+      Ambulance Visit:
+        description: Person using transportation service for the purpose of initiating one of the other Visits, without a
+          Care Site, within one day, potentially with Providers accompanying the Visit and delivering service
+      Case Management Visit:
+        description: Person interacting with healthcare system, without a Care Site, within a day, with no Providers involved,
+          for administrative purposes
+license: MIT
+see_also:
+- https://linkml.github.io/valuesets

valuesets/schema/industry/extractive_industry.yaml

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+name: extractive_industry
+id: https://w3id.org/linkml/valuesets/industry/extractive_industry
+prefixes:
+  # linkml_common: https://w3id.org/linkml-common/
+  valuesets: https://w3id.org/valuesets/
+default_prefix: valuesets
+slots:
+  extractive_industry_facility_type:
+    description: Types of extractive industry facilities
+    range: ExtractiveIndustryFacilityTypeEnum
+  extractive_industry_product_type:
+    description: Types of products extracted from extractive industry facilities
+    range: ExtractiveIndustryProductTypeEnum
+  mining_method:
+    description: Methods used for extracting minerals from the earth
+    range: MiningMethodEnum
+  well_type:
+    description: Types of wells used for extracting fluid resources
+    range: WellTypeEnum
+enums:
+  ExtractiveIndustryFacilityTypeEnum:
+    description: Types of extractive industry facilities
+    permissible_values:
+      MINING_FACILITY:
+        description: A facility where mineral resources are extracted
+        title: Mining Facility
+      WELL_FACILITY:
+        description: A facility where fluid resources are extracted
+        title: Well Facility
+      QUARRY_FACILITY:
+        description: A facility where stone, sand, or gravel are extracted
+        title: Quarry Facility
+  ExtractiveIndustryProductTypeEnum:
+    description: Types of products extracted from extractive industry facilities
+    permissible_values:
+      MINERAL:
+        description: A solid inorganic substance
+        title: Mineral
+      METAL:
+        description: A solid metallic substance
+        title: Metal
+      COAL:
+        description: A combustible black or brownish-black sedimentary rock
+        title: Coal
+      OIL:
+        description: A liquid petroleum resource
+        title: Oil
+      GAS:
+        description: A gaseous petroleum resource
+        title: Gas
+      STONE:
+        description: A solid aggregate of minerals
+        title: Stone
+      SAND:
+        description: A granular material composed of finely divided rock and mineral particles
+        title: Sand
+      GRAVEL:
+        description: A loose aggregation of rock fragments
+        title: Gravel
+  MiningMethodEnum:
+    description: Methods used for extracting minerals from the earth
+    permissible_values:
+      UNDERGROUND:
+        description: Extraction occurs beneath the earth's surface
+        title: Underground
+      OPEN_PIT:
+        description: Extraction occurs on the earth's surface
+        title: Open Pit
+      PLACER:
+        description: Extraction of valuable minerals from alluvial deposits
+        title: Placer
+      IN_SITU:
+        description: Extraction without removing the ore from its original location
+        title: In Situ
+  WellTypeEnum:
+    description: Types of wells used for extracting fluid resources
+    permissible_values:
+      OIL:
+        description: A well that primarily extracts crude oil
+        title: Oil
+      GAS:
+        description: A well that primarily extracts natural gas
+        title: Gas
+      WATER:
+        description: A well that extracts water for various purposes
+        title: Water
+      INJECTION:
+        description: A well used to inject fluids into underground formations
+        title: Injection