valuesets 0.3.1__py3-none-any.whl

valuesets/schema/bio/biological_colors.yaml

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+name: biological_colors
+title: Biological Color Value Sets
+description: 'Color value sets for biological traits including eye colors, hair colors, flower colors, and other phenotypic
+  color characteristics.
+
+  '
+id: https://w3id.org/valuesets/bio/biological_colors
+imports:
+- linkml:types
+prefixes:
+  linkml: https://w3id.org/linkml/
+  HEX: https://www.color-hex.com/color/
+  PATO: http://purl.obolibrary.org/obo/PATO_
+  HP: http://purl.obolibrary.org/obo/HP_
+  TO: http://purl.obolibrary.org/obo/TO_
+  VT: http://purl.obolibrary.org/obo/VT_
+  valuesets: https://w3id.org/valuesets/
+default_prefix: valuesets
+slots:
+  eye_color:
+    description: Human eye color phenotypes
+    range: EyeColorEnum
+  hair_color:
+    description: Human hair color phenotypes
+    range: HairColorEnum
+  flower_color:
+    description: Common flower colors
+    range: FlowerColorEnum
+  animal_coat_color:
+    description: Animal coat/fur colors
+    range: AnimalCoatColorEnum
+  skin_tone:
+    description: Human skin tone classifications (Fitzpatrick scale based)
+    range: SkinToneEnum
+  plant_leaf_color:
+    description: Plant leaf colors (including seasonal changes)
+    range: PlantLeafColorEnum
+enums:
+  EyeColorEnum:
+    description: Human eye color phenotypes
+    permissible_values:
+      BROWN:
+        description: Brown eyes
+        annotations:
+          hex_range: 663300-8B4513
+          prevalence: 79% worldwide
+      BLUE:
+        description: Blue eyes
+        meaning: HP:0000635
+        title: Blue irides
+        annotations:
+          hex_range: 4169E1-87CEEB
+          prevalence: 8-10% worldwide
+      GREEN:
+        description: Green eyes
+        annotations:
+          hex_range: 2E8B57-90EE90
+          prevalence: 2% worldwide
+      HAZEL:
+        description: Hazel eyes (brown-green mix)
+        annotations:
+          hex_range: 8B7355-C9A878
+          prevalence: 5% worldwide
+      AMBER:
+        description: Amber/golden eyes
+        annotations:
+          hex_range: FFBF00-FFB300
+          prevalence: rare
+      GRAY:
+        description: Gray eyes
+        meaning: HP:0007730
+        title: Iris hypopigmentation
+        annotations:
+          hex_range: 778899-C0C0C0
+          prevalence: <1% worldwide
+      HETEROCHROMIA:
+        description: Different colored eyes
+        meaning: HP:0001100
+        title: Heterochromia iridis
+        annotations:
+          note: complete or sectoral heterochromia
+      RED_PINK:
+        description: Red/pink eyes (albinism)
+        annotations:
+          condition: associated with albinism
+      VIOLET:
+        description: Violet eyes (extremely rare)
+        annotations:
+          hex_range: 8B7AB8-9370DB
+          prevalence: extremely rare
+  HairColorEnum:
+    description: Human hair color phenotypes
+    permissible_values:
+      BLACK:
+        description: Black hair
+        annotations:
+          hex: '000000'
+          prevalence: most common worldwide
+      BROWN:
+        description: Brown hair
+        annotations:
+          hex_range: 654321-8B4513
+      DARK_BROWN:
+        description: Dark brown hair
+        annotations:
+          hex: 3B2F2F
+      LIGHT_BROWN:
+        description: Light brown hair
+        annotations:
+          hex: '977961'
+      BLONDE:
+        description: Blonde/blond hair
+        meaning: HP:0002286
+        title: Fair hair
+        annotations:
+          hex_range: FAF0BE-FFF8DC
+      DARK_BLONDE:
+        description: Dark blonde hair
+        annotations:
+          hex: 9F8F71
+      LIGHT_BLONDE:
+        description: Light blonde hair
+        annotations:
+          hex: FFF8DC
+      PLATINUM_BLONDE:
+        description: Platinum blonde hair
+        annotations:
+          hex: E5E5E5
+      STRAWBERRY_BLONDE:
+        description: Strawberry blonde hair
+        annotations:
+          hex: FF9966
+      RED:
+        description: Red hair
+        meaning: HP:0002297
+        title: Red hair
+        annotations:
+          hex_range: 922724-FF4500
+          prevalence: 1-2% worldwide
+      AUBURN:
+        description: Auburn hair (reddish-brown)
+        annotations:
+          hex: A52A2A
+      GINGER:
+        description: Ginger hair (orange-red)
+        annotations:
+          hex: FF6600
+      GRAY:
+        description: Gray hair
+        meaning: HP:0002216
+        title: Premature graying of hair
+        annotations:
+          hex_range: 808080-C0C0C0
+      WHITE:
+        description: White hair
+        meaning: HP:0011364
+        title: White hair
+        annotations:
+          hex: FFFFFF
+      SILVER:
+        description: Silver hair
+        annotations:
+          hex: C0C0C0
+  FlowerColorEnum:
+    description: Common flower colors
+    permissible_values:
+      RED:
+        description: Red flowers
+        annotations:
+          hex: FF0000
+          examples: roses, tulips, poppies
+      PINK:
+        description: Pink flowers
+        annotations:
+          hex: FFC0CB
+          examples: peonies, cherry blossoms
+      ORANGE:
+        description: Orange flowers
+        annotations:
+          hex: FFA500
+          examples: marigolds, zinnias
+      YELLOW:
+        description: Yellow flowers
+        annotations:
+          hex: FFFF00
+          examples: sunflowers, daffodils
+      WHITE:
+        description: White flowers
+        annotations:
+          hex: FFFFFF
+          examples: lilies, daisies
+      PURPLE:
+        description: Purple flowers
+        annotations:
+          hex: '800080'
+          examples: lavender, violets
+      VIOLET:
+        description: Violet flowers
+        annotations:
+          hex: 7F00FF
+          examples: violets, pansies
+      BLUE:
+        description: Blue flowers
+        annotations:
+          hex: 0000FF
+          examples: forget-me-nots, cornflowers
+      LAVENDER:
+        description: Lavender flowers
+        annotations:
+          hex: E6E6FA
+          examples: lavender, wisteria
+      MAGENTA:
+        description: Magenta flowers
+        annotations:
+          hex: FF00FF
+          examples: fuchsias, bougainvillea
+      BURGUNDY:
+        description: Burgundy/deep red flowers
+        annotations:
+          hex: '800020'
+          examples: dahlias, chrysanthemums
+      CORAL:
+        description: Coral flowers
+        annotations:
+          hex: FF7F50
+          examples: coral bells, begonias
+      PEACH:
+        description: Peach flowers
+        annotations:
+          hex: FFDAB9
+          examples: roses, dahlias
+      CREAM:
+        description: Cream flowers
+        annotations:
+          hex: FFFDD0
+          examples: roses, tulips
+      BICOLOR:
+        description: Two-colored flowers
+        annotations:
+          note: flowers with two distinct colors
+      MULTICOLOR:
+        description: Multi-colored flowers
+        annotations:
+          note: flowers with more than two colors
+  AnimalCoatColorEnum:
+    description: Animal coat/fur colors
+    permissible_values:
+      BLACK:
+        description: Black coat
+        annotations:
+          hex: '000000'
+      WHITE:
+        description: White coat
+        annotations:
+          hex: FFFFFF
+      BROWN:
+        description: Brown coat
+        annotations:
+          hex: 964B00
+      TAN:
+        description: Tan coat
+        annotations:
+          hex: D2B48C
+      CREAM:
+        description: Cream coat
+        annotations:
+          hex: FFFDD0
+      GRAY:
+        description: Gray coat
+        annotations:
+          hex: '808080'
+      RED:
+        description: Red/rust coat
+        annotations:
+          hex: B22222
+      GOLDEN:
+        description: Golden coat
+        annotations:
+          hex: FFD700
+      FAWN:
+        description: Fawn coat
+        annotations:
+          hex: E5AA70
+      BRINDLE:
+        description: Brindle pattern (striped)
+        annotations:
+          pattern: striped mixture of colors
+      SPOTTED:
+        description: Spotted pattern
+        annotations:
+          pattern: spots on base color
+      MERLE:
+        description: Merle pattern (mottled)
+        annotations:
+          pattern: mottled patches
+      PIEBALD:
+        description: Piebald pattern (patches)
+        annotations:
+          pattern: irregular patches
+      CALICO:
+        description: Calico pattern (tri-color)
+        annotations:
+          pattern: tri-color patches
+          species: primarily cats
+      TABBY:
+        description: Tabby pattern (striped)
+        annotations:
+          pattern: striped or spotted
+          species: primarily cats
+      TORTOISESHELL:
+        description: Tortoiseshell pattern
+        annotations:
+          pattern: mottled orange and black
+          species: primarily cats
+      ROAN:
+        description: Roan pattern (mixed white)
+        annotations:
+          pattern: white mixed with base color
+          species: primarily horses
+      PALOMINO:
+        description: Palomino (golden with white mane)
+        annotations:
+          hex: DEC05F
+          species: horses
+      CHESTNUT:
+        description: Chestnut/sorrel
+        annotations:
+          hex: CD5C5C
+          species: horses
+      BAY:
+        description: Bay (brown with black points)
+        annotations:
+          species: horses
+  SkinToneEnum:
+    description: Human skin tone classifications (Fitzpatrick scale based)
+    permissible_values:
+      TYPE_I:
+        description: Very pale white skin
+        annotations:
+          fitzpatrick: Type I
+          hex_range: FFE0BD-FFDFC4
+          sun_reaction: always burns, never tans
+      TYPE_II:
+        description: Fair white skin
+        annotations:
+          fitzpatrick: Type II
+          hex_range: F0D5BE-E8C5A0
+          sun_reaction: burns easily, tans minimally
+      TYPE_III:
+        description: Light brown skin
+        annotations:
+          fitzpatrick: Type III
+          hex_range: DDA582-CD9766
+          sun_reaction: burns moderately, tans gradually
+      TYPE_IV:
+        description: Moderate brown skin
+        annotations:
+          fitzpatrick: Type IV
+          hex_range: B87659-A47148
+          sun_reaction: burns minimally, tans easily
+      TYPE_V:
+        description: Dark brown skin
+        annotations:
+          fitzpatrick: Type V
+          hex_range: 935D37-7C4E2A
+          sun_reaction: rarely burns, tans darkly
+      TYPE_VI:
+        description: Very dark brown to black skin
+        annotations:
+          fitzpatrick: Type VI
+          hex_range: 5C3A1E-3D2314
+          sun_reaction: never burns, always tans darkly
+  PlantLeafColorEnum:
+    description: Plant leaf colors (including seasonal changes)
+    permissible_values:
+      GREEN:
+        description: Green leaves (healthy/summer)
+        meaning: PATO:0000320
+        annotations:
+          hex_range: 228B22-90EE90
+          season: spring/summer
+      DARK_GREEN:
+        description: Dark green leaves
+        annotations:
+          hex: '006400'
+      LIGHT_GREEN:
+        description: Light green leaves
+        annotations:
+          hex: 90EE90
+      YELLOW_GREEN:
+        description: Yellow-green leaves
+        annotations:
+          hex: 9ACD32
+          condition: new growth or nutrient deficiency
+      YELLOW:
+        description: Yellow leaves (autumn or chlorosis)
+        meaning: PATO:0000324
+        annotations:
+          hex: FFD700
+          season: autumn
+      ORANGE:
+        description: Orange leaves (autumn)
+        annotations:
+          hex: FF8C00
+          season: autumn
+      RED:
+        description: Red leaves (autumn or certain species)
+        meaning: PATO:0000322
+        annotations:
+          hex: DC143C
+          season: autumn
+      PURPLE:
+        description: Purple leaves (certain species)
+        annotations:
+          hex: '800080'
+          examples: purple basil, Japanese maple
+      BRONZE:
+        description: Bronze leaves
+        annotations:
+          hex: CD7F32
+      SILVER:
+        description: Silver/gray leaves
+        annotations:
+          hex: C0C0C0
+          examples: dusty miller, artemisia
+      VARIEGATED:
+        description: Variegated leaves (multiple colors)
+        annotations:
+          pattern: mixed colors/patterns
+      BROWN:
+        description: Brown leaves (dead/dying)
+        annotations:
+          hex: 964B00
+          condition: senescent or dead