brainstate 0.1.10__py2.py3-none-any.whl → 0.2.1__py2.py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (163) hide show
  1. brainstate/__init__.py +169 -58
  2. brainstate/_compatible_import.py +340 -148
  3. brainstate/_compatible_import_test.py +681 -0
  4. brainstate/_deprecation.py +210 -0
  5. brainstate/_deprecation_test.py +2319 -0
  6. brainstate/{util/error.py → _error.py} +45 -55
  7. brainstate/_state.py +1652 -1605
  8. brainstate/_state_test.py +52 -52
  9. brainstate/_utils.py +47 -47
  10. brainstate/environ.py +1495 -563
  11. brainstate/environ_test.py +1223 -62
  12. brainstate/graph/__init__.py +22 -29
  13. brainstate/graph/_node.py +240 -0
  14. brainstate/graph/_node_test.py +589 -0
  15. brainstate/graph/{_graph_operation.py → _operation.py} +1624 -1738
  16. brainstate/graph/_operation_test.py +1147 -0
  17. brainstate/mixin.py +1433 -365
  18. brainstate/mixin_test.py +1017 -77
  19. brainstate/nn/__init__.py +137 -135
  20. brainstate/nn/_activations.py +1100 -808
  21. brainstate/nn/_activations_test.py +354 -331
  22. brainstate/nn/_collective_ops.py +633 -514
  23. brainstate/nn/_collective_ops_test.py +774 -43
  24. brainstate/nn/_common.py +226 -178
  25. brainstate/nn/_common_test.py +154 -0
  26. brainstate/nn/_conv.py +2010 -501
  27. brainstate/nn/_conv_test.py +849 -238
  28. brainstate/nn/_delay.py +575 -588
  29. brainstate/nn/_delay_test.py +243 -238
  30. brainstate/nn/_dropout.py +618 -426
  31. brainstate/nn/_dropout_test.py +477 -100
  32. brainstate/nn/_dynamics.py +1267 -1343
  33. brainstate/nn/_dynamics_test.py +67 -78
  34. brainstate/nn/_elementwise.py +1298 -1119
  35. brainstate/nn/_elementwise_test.py +830 -169
  36. brainstate/nn/_embedding.py +408 -58
  37. brainstate/nn/_embedding_test.py +156 -0
  38. brainstate/nn/{_fixedprob.py → _event_fixedprob.py} +233 -239
  39. brainstate/nn/{_fixedprob_test.py → _event_fixedprob_test.py} +115 -114
  40. brainstate/nn/{_linear_mv.py → _event_linear.py} +83 -83
  41. brainstate/nn/{_linear_mv_test.py → _event_linear_test.py} +121 -120
  42. brainstate/nn/_exp_euler.py +254 -92
  43. brainstate/nn/_exp_euler_test.py +377 -35
  44. brainstate/nn/_linear.py +744 -424
  45. brainstate/nn/_linear_test.py +475 -107
  46. brainstate/nn/_metrics.py +1070 -0
  47. brainstate/nn/_metrics_test.py +611 -0
  48. brainstate/nn/_module.py +384 -377
  49. brainstate/nn/_module_test.py +40 -40
  50. brainstate/nn/_normalizations.py +1334 -975
  51. brainstate/nn/_normalizations_test.py +699 -73
  52. brainstate/nn/_paddings.py +1020 -0
  53. brainstate/nn/_paddings_test.py +723 -0
  54. brainstate/nn/_poolings.py +2239 -1177
  55. brainstate/nn/_poolings_test.py +953 -217
  56. brainstate/nn/{_rate_rnns.py → _rnns.py} +946 -554
  57. brainstate/nn/_rnns_test.py +593 -0
  58. brainstate/nn/_utils.py +216 -89
  59. brainstate/nn/_utils_test.py +402 -0
  60. brainstate/{init/_random_inits.py → nn/init.py} +809 -553
  61. brainstate/{init/_random_inits_test.py → nn/init_test.py} +180 -149
  62. brainstate/random/__init__.py +270 -24
  63. brainstate/random/_rand_funs.py +3938 -3616
  64. brainstate/random/_rand_funs_test.py +640 -567
  65. brainstate/random/_rand_seed.py +675 -210
  66. brainstate/random/_rand_seed_test.py +48 -48
  67. brainstate/random/_rand_state.py +1617 -1409
  68. brainstate/random/_rand_state_test.py +551 -0
  69. brainstate/transform/__init__.py +59 -0
  70. brainstate/transform/_ad_checkpoint.py +176 -0
  71. brainstate/{compile → transform}/_ad_checkpoint_test.py +49 -49
  72. brainstate/{augment → transform}/_autograd.py +1025 -778
  73. brainstate/{augment → transform}/_autograd_test.py +1289 -1289
  74. brainstate/transform/_conditions.py +316 -0
  75. brainstate/{compile → transform}/_conditions_test.py +220 -220
  76. brainstate/{compile → transform}/_error_if.py +94 -92
  77. brainstate/{compile → transform}/_error_if_test.py +52 -52
  78. brainstate/transform/_eval_shape.py +145 -0
  79. brainstate/{augment → transform}/_eval_shape_test.py +38 -38
  80. brainstate/{compile → transform}/_jit.py +399 -346
  81. brainstate/{compile → transform}/_jit_test.py +143 -143
  82. brainstate/{compile → transform}/_loop_collect_return.py +675 -536
  83. brainstate/{compile → transform}/_loop_collect_return_test.py +58 -58
  84. brainstate/{compile → transform}/_loop_no_collection.py +283 -184
  85. brainstate/{compile → transform}/_loop_no_collection_test.py +50 -50
  86. brainstate/transform/_make_jaxpr.py +2016 -0
  87. brainstate/transform/_make_jaxpr_test.py +1510 -0
  88. brainstate/transform/_mapping.py +529 -0
  89. brainstate/transform/_mapping_test.py +194 -0
  90. brainstate/{compile → transform}/_progress_bar.py +255 -202
  91. brainstate/{augment → transform}/_random.py +171 -151
  92. brainstate/{compile → transform}/_unvmap.py +256 -159
  93. brainstate/transform/_util.py +286 -0
  94. brainstate/typing.py +837 -304
  95. brainstate/typing_test.py +780 -0
  96. brainstate/util/__init__.py +27 -50
  97. brainstate/util/_others.py +1025 -0
  98. brainstate/util/_others_test.py +962 -0
  99. brainstate/util/_pretty_pytree.py +1301 -0
  100. brainstate/util/_pretty_pytree_test.py +675 -0
  101. brainstate/util/{pretty_repr.py → _pretty_repr.py} +462 -328
  102. brainstate/util/_pretty_repr_test.py +696 -0
  103. brainstate/util/filter.py +945 -469
  104. brainstate/util/filter_test.py +912 -0
  105. brainstate/util/struct.py +910 -523
  106. brainstate/util/struct_test.py +602 -0
  107. {brainstate-0.1.10.dist-info → brainstate-0.2.1.dist-info}/METADATA +108 -91
  108. brainstate-0.2.1.dist-info/RECORD +111 -0
  109. {brainstate-0.1.10.dist-info → brainstate-0.2.1.dist-info}/licenses/LICENSE +202 -202
  110. brainstate/augment/__init__.py +0 -30
  111. brainstate/augment/_eval_shape.py +0 -99
  112. brainstate/augment/_mapping.py +0 -1060
  113. brainstate/augment/_mapping_test.py +0 -597
  114. brainstate/compile/__init__.py +0 -38
  115. brainstate/compile/_ad_checkpoint.py +0 -204
  116. brainstate/compile/_conditions.py +0 -256
  117. brainstate/compile/_make_jaxpr.py +0 -888
  118. brainstate/compile/_make_jaxpr_test.py +0 -156
  119. brainstate/compile/_util.py +0 -147
  120. brainstate/functional/__init__.py +0 -27
  121. brainstate/graph/_graph_node.py +0 -244
  122. brainstate/graph/_graph_node_test.py +0 -73
  123. brainstate/graph/_graph_operation_test.py +0 -563
  124. brainstate/init/__init__.py +0 -26
  125. brainstate/init/_base.py +0 -52
  126. brainstate/init/_generic.py +0 -244
  127. brainstate/init/_regular_inits.py +0 -105
  128. brainstate/init/_regular_inits_test.py +0 -50
  129. brainstate/nn/_inputs.py +0 -608
  130. brainstate/nn/_ltp.py +0 -28
  131. brainstate/nn/_neuron.py +0 -705
  132. brainstate/nn/_neuron_test.py +0 -161
  133. brainstate/nn/_others.py +0 -46
  134. brainstate/nn/_projection.py +0 -486
  135. brainstate/nn/_rate_rnns_test.py +0 -63
  136. brainstate/nn/_readout.py +0 -209
  137. brainstate/nn/_readout_test.py +0 -53
  138. brainstate/nn/_stp.py +0 -236
  139. brainstate/nn/_synapse.py +0 -505
  140. brainstate/nn/_synapse_test.py +0 -131
  141. brainstate/nn/_synaptic_projection.py +0 -423
  142. brainstate/nn/_synouts.py +0 -162
  143. brainstate/nn/_synouts_test.py +0 -57
  144. brainstate/nn/metrics.py +0 -388
  145. brainstate/optim/__init__.py +0 -38
  146. brainstate/optim/_base.py +0 -64
  147. brainstate/optim/_lr_scheduler.py +0 -448
  148. brainstate/optim/_lr_scheduler_test.py +0 -50
  149. brainstate/optim/_optax_optimizer.py +0 -152
  150. brainstate/optim/_optax_optimizer_test.py +0 -53
  151. brainstate/optim/_sgd_optimizer.py +0 -1104
  152. brainstate/random/_random_for_unit.py +0 -52
  153. brainstate/surrogate.py +0 -1957
  154. brainstate/transform.py +0 -23
  155. brainstate/util/caller.py +0 -98
  156. brainstate/util/others.py +0 -540
  157. brainstate/util/pretty_pytree.py +0 -945
  158. brainstate/util/pretty_pytree_test.py +0 -159
  159. brainstate/util/pretty_table.py +0 -2954
  160. brainstate/util/scaling.py +0 -258
  161. brainstate-0.1.10.dist-info/RECORD +0 -130
  162. {brainstate-0.1.10.dist-info → brainstate-0.2.1.dist-info}/WHEEL +0 -0
  163. {brainstate-0.1.10.dist-info → brainstate-0.2.1.dist-info}/top_level.txt +0 -0
brainstate/__init__.py CHANGED
@@ -1,58 +1,169 @@
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- # Copyright 2024 BDP Ecosystem Limited. All Rights Reserved.
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- #
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- # Licensed under the Apache License, Version 2.0 (the "License");
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- # you may not use this file except in compliance with the License.
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- # You may obtain a copy of the License at
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- #
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- # http://www.apache.org/licenses/LICENSE-2.0
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- #
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- # Unless required by applicable law or agreed to in writing, software
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- # distributed under the License is distributed on an "AS IS" BASIS,
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- # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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- # See the License for the specific language governing permissions and
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- # limitations under the License.
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- # ==============================================================================
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-
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- """
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- A ``State``-based Transformation System for Program Compilation and Augmentation
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- """
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-
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- __version__ = "0.1.10"
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-
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- from . import augment
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- from . import compile
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- from . import environ
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- from . import functional
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- from . import graph
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- from . import init
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- from . import mixin
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- from . import nn
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- from . import optim
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- from . import random
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- from . import surrogate
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- from . import transform
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- from . import typing
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- from . import util
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- from ._state import *
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- from ._state import __all__ as _state_all
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-
39
- __all__ = [
40
- 'augment',
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- 'compile',
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- 'environ',
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- 'functional',
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- 'graph',
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- 'init',
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- 'mixin',
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- 'nn',
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- 'optim',
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- 'random',
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- 'surrogate',
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- 'typing',
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- 'util',
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- 'transform',
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- ]
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- __all__ = __all__ + _state_all
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-
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- # ----------------------- #
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- del _state_all
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+ # Copyright 2024 BrainX Ecosystem Limited. All Rights Reserved.
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+ #
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+ # Licensed under the Apache License, Version 2.0 (the "License");
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+ # you may not use this file except in compliance with the License.
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+ # You may obtain a copy of the License at
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+ #
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+ # http://www.apache.org/licenses/LICENSE-2.0
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+ #
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+ # Unless required by applicable law or agreed to in writing, software
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+ # distributed under the License is distributed on an "AS IS" BASIS,
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+ # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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+ # See the License for the specific language governing permissions and
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+ # limitations under the License.
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+ # ==============================================================================
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+
16
+ """
17
+ A ``State``-based Transformation System for Program Compilation and Augmentation
18
+ """
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+
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+ __version__ = "0.2.1"
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+ __versio_info__ = (0, 2, 1)
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+
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+ from . import environ
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+ from . import graph
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+ from . import mixin
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+ from . import nn
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+ from . import random
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+ from . import transform
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+ from . import typing
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+ from . import util
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+ from ._error import *
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+ from ._error import __all__ as _error_all
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+ from ._state import *
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+ from ._state import __all__ as _state_all
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+
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+ # Create deprecated module proxies with scoped APIs
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+ from ._deprecation import create_deprecated_module_proxy
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+
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+ # Augment module scope
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+ _augment_apis = {
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+ 'GradientTransform': 'brainstate.transform._autograd',
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+ 'grad': 'brainstate.transform._autograd',
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+ 'vector_grad': 'brainstate.transform._autograd',
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+ 'hessian': 'brainstate.transform._autograd',
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+ 'jacobian': 'brainstate.transform._autograd',
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+ 'jacrev': 'brainstate.transform._autograd',
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+ 'jacfwd': 'brainstate.transform._autograd',
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+ 'abstract_init': 'brainstate.transform._eval_shape',
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+ 'vmap': 'brainstate.transform._mapping',
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+ 'pmap': 'brainstate.transform._mapping',
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+ 'map': 'brainstate.transform._mapping',
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+ 'vmap_new_states': 'brainstate.transform._mapping',
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+ 'restore_rngs': 'brainstate.transform._random',
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+ }
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+
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+ augment = create_deprecated_module_proxy(
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+ deprecated_name='brainstate.augment',
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+ replacement_module=transform,
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+ replacement_name='brainstate.transform',
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+ scoped_apis=_augment_apis
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+ )
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+
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+ # Compile module scope
64
+ _compile_apis = {
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+ 'checkpoint': 'brainstate.transform._ad_checkpoint',
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+ 'remat': 'brainstate.transform._ad_checkpoint',
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+ 'cond': 'brainstate.transform._conditions',
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+ 'switch': 'brainstate.transform._conditions',
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+ 'ifelse': 'brainstate.transform._conditions',
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+ 'jit_error_if': 'brainstate.transform._error_if',
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+ 'jit': 'brainstate.transform._jit',
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+ 'scan': 'brainstate.transform._loop_collect_return',
73
+ 'checkpointed_scan': 'brainstate.transform._loop_collect_return',
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+ 'for_loop': 'brainstate.transform._loop_collect_return',
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+ 'checkpointed_for_loop': 'brainstate.transform._loop_collect_return',
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+ 'while_loop': 'brainstate.transform._loop_no_collection',
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+ 'bounded_while_loop': 'brainstate.transform._loop_no_collection',
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+ 'StatefulFunction': 'brainstate.transform._make_jaxpr',
79
+ 'make_jaxpr': 'brainstate.transform._make_jaxpr',
80
+ 'ProgressBar': 'brainstate.transform._progress_bar',
81
+ }
82
+
83
+ compile = create_deprecated_module_proxy(
84
+ deprecated_name='brainstate.compile',
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+ replacement_module=transform,
86
+ replacement_name='brainstate.transform',
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+ scoped_apis=_compile_apis
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+ )
89
+
90
+ # Functional module scope - use direct attribute access from nn module
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+ _functional_apis = {
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+ 'weight_standardization': 'brainstate.nn._normalizations',
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+ 'clip_grad_norm': 'brainstate.nn._others',
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+ 'tanh': 'brainstate.nn._activations',
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+ 'relu': 'brainstate.nn._activations',
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+ 'squareplus': 'brainstate.nn._activations',
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+ 'softplus': 'brainstate.nn._activations',
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+ 'soft_sign': 'brainstate.nn._activations',
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+ 'sigmoid': 'brainstate.nn._activations',
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+ 'silu': 'brainstate.nn._activations',
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+ 'swish': 'brainstate.nn._activations',
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+ 'log_sigmoid': 'brainstate.nn._activations',
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+ 'elu': 'brainstate.nn._activations',
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+ 'leaky_relu': 'brainstate.nn._activations',
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+ 'hard_tanh': 'brainstate.nn._activations',
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+ 'celu': 'brainstate.nn._activations',
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+ 'selu': 'brainstate.nn._activations',
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+ 'gelu': 'brainstate.nn._activations',
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+ 'glu': 'brainstate.nn._activations',
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+ 'logsumexp': 'brainstate.nn._activations',
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+ 'log_softmax': 'brainstate.nn._activations',
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+ 'softmax': 'brainstate.nn._activations',
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+ 'standardize': 'brainstate.nn._activations',
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+ 'relu6': 'brainstate.nn._activations',
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+ 'hard_sigmoid': 'brainstate.nn._activations',
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+ 'sparse_plus': 'brainstate.nn._activations',
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+ 'hard_silu': 'brainstate.nn._activations',
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+ 'hard_swish': 'brainstate.nn._activations',
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+ 'hard_shrink': 'brainstate.nn._activations',
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+ 'rrelu': 'brainstate.nn._activations',
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+ 'mish': 'brainstate.nn._activations',
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+ 'soft_shrink': 'brainstate.nn._activations',
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+ 'prelu': 'brainstate.nn._activations',
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+ 'softmin': 'brainstate.nn._activations',
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+ 'one_hot': 'brainstate.nn._activations',
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+ 'sparse_sigmoid': 'brainstate.nn._activations',
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+ }
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+
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+ functional = create_deprecated_module_proxy(
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+ deprecated_name='brainstate.functional',
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+ replacement_module=nn,
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+ replacement_name='brainstate.nn',
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+ scoped_apis=_functional_apis
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+ )
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+
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+
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+ def __getattr__(name):
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+ if name in ['surrogate', 'init', 'optim']:
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+ import warnings
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+ warnings.warn(
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+ f"brainstate.{name} module is deprecated and will be removed in a future version. "
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+ f"Please use braintools.{name} instead.",
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+ DeprecationWarning,
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+ stacklevel=2
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+ )
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+ import braintools
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+ return getattr(braintools, name)
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+ raise AttributeError(
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+ f'module {__name__!r} has no attribute {name!r}'
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+ )
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+
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+
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+ __all__ = [
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+ 'environ',
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+ 'graph',
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+ 'mixin',
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+ 'nn',
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+ 'random',
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+ 'transform',
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+ 'typing',
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+ 'util',
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+ # Deprecated modules
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+ 'augment',
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+ 'compile',
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+ 'functional',
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+ ]
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+ __all__ = __all__ + _state_all + _error_all
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+ del _state_all, create_deprecated_module_proxy, _augment_apis, _compile_apis, _functional_apis
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+ del _error_all