molstar 2.3.7 → 2.3.8

package/lib/commonjs/cli/state-docs/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../src/cli/state-docs/index.ts"],"names":[],"mappings":";;AACA;;;;GAIG;;;AAEH,gFAAuD;AACvD,6CAAgE;AAChE,2CAA+C;AAC/C,kDAAyB;AACzB,uCAAwC;AACxC,oDAAyD;AACzD,oEAAkE;AAElE,sCAAsC;AACtC,CAAC,CAAC,eAAe,CAAC,IAAI,CAAC,QAAQ,CAAC,EAAE,CAAC;AAEnC,uBAAuB;AACvB,IAAM,GAAG,GAAG,IAAI,uBAAa,CAAC;IAC1B,SAAS,EAAE,EAAE;CAChB,CAAC,CAAC;AAEH,IAAM,OAAO,GAAG,wBAAa,CAAC,MAAM,EAAE,CAAC;AAEvC,SAAS,YAAY,CAAC,CAAqB;IACvC,IAAI,CAAC,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO,IAAI,CAAC;IAChC,OAAO,CAAC,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,IAAI,EAAN,CAAM,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;AAC1C,CAAC;AAED,SAAS,gBAAgB,CAAC,CAAmB;IACzC,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,kBAAe,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,GAAG,EAAE,GAAG,CAAC,eAAS,CAAC,CAAC,EAAE,YAAO,YAAY,CAAC,CAAC,CAAC,UAAU,CAAC,IAAI,CAAC,YAAO,YAAY,CAAC,CAAC,CAAC,UAAU,CAAC,EAAE,CAAG,CAAC,CAAC;IAC7J,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;IAC/B,IAAI,CAAC,CAAC,UAAU,CAAC,OAAO,CAAC,WAAW,EAAE;QAClC,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,MAAI,CAAC,CAAC,UAAU,CAAC,OAAO,CAAC,WAAW,MAAG,CAAC,CAAC;QACtE,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;KAClC;IACD,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;IAC/B,IAAI,CAAC,CAAC,UAAU,CAAC,MAAM,EAAE;QACrB,IAAM,MAAM,GAAG,CAAC,CAAC,UAAU,CAAC,MAAM,CAAC,KAAK,CAAC,EAAE,GAAG,CAAC,CAAC;QAChD,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,gBAAgB,CAAC,CAAC;QAC/C,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;QAC/B,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,IAAA,qBAAU,EAAC,MAAM,CAAC,CAAC,CAAC;QACjD,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;QAE/B,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,wBAAwB,CAAC,CAAC;QACvD,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;QAC/B,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,YAAa,IAAI,CAAC,SAAS,CAAC,kCAAe,CAAC,gBAAgB,CAAC,MAAM,CAAC,EAAE,IAAI,EAAE,CAAC,CAAC,UAAU,CAAC,CAAC;QACvH,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;KAClC;IACD,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,8BAA8B,CAAC,CAAC;IAC7D,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AACnC,CAAC;AAED,IAAM,YAAY,GAAG,4BAAgB,CAAC,MAAM,EAAE,CAAC;AAE/C,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,2CAA2C,CAAC,CAAC;AAC1E,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AAC/B,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AAC/B,YAAY,CAAC,OAAO,CAAC,UAAA,CAAC;IAClB,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,QAAM,CAAC,CAAC,EAAE,WAAM,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,GAAG,EAAE,GAAG,CAAC,MAAG,CAAC,CAAC;IACxE,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AACnC,CAAC,CAAC,CAAC;AACH,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AAC/B,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,8BAA8B,CAAC,CAAC;AAC7D,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AAC/B,YAAY,CAAC,OAAO,CAAC,UAAA,CAAC,IAAI,OAAA,gBAAgB,CAAC,CAAC,CAAC,EAAnB,CAAmB,CAAC,CAAC;AAE/C,EAAE,CAAC,aAAa,CAAC,0BAA0B,EAAE,wBAAa,CAAC,SAAS,CAAC,OAAO,CAAC,CAAC,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../src/cli/state-docs/index.ts"],"names":[],"mappings":";;AACA;;;;GAIG;;;AAEH,gFAAuD;AACvD,6CAAgE;AAChE,2CAA+C;AAC/C,kDAAyB;AACzB,uCAAwC;AACxC,oDAAyD;AACzD,oEAAkE;AAElE,sCAAsC;AACtC,CAAC,CAAC,eAAe,CAAC,IAAI,CAAC,QAAQ,CAAC,EAAE,CAAC;AAEnC,uBAAuB;AACvB,IAAM,GAAG,GAAG,IAAI,uBAAa,CAAC;IAC1B,SAAS,EAAE,EAAE;CAChB,CAAC,CAAC;AAEH,IAAM,OAAO,GAAG,wBAAa,CAAC,MAAM,EAAE,CAAC;AAEvC,SAAS,YAAY,CAAC,CAAqB;IACvC,IAAI,CAAC,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO,IAAI,CAAC;IAChC,OAAO,CAAC,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,IAAI,EAAN,CAAM,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;AAC1C,CAAC;AAED,SAAS,gBAAgB,CAAC,CAAmB;IACzC,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,uBAAe,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,GAAG,EAAE,GAAG,CAAC,oBAAS,CAAC,CAAC,EAAE,iBAAO,YAAY,CAAC,CAAC,CAAC,UAAU,CAAC,IAAI,CAAC,iBAAO,YAAY,CAAC,CAAC,CAAC,UAAU,CAAC,EAAE,CAAC,CAAE,CAAC,CAAC;IAC7J,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;IAC/B,IAAI,CAAC,CAAC,UAAU,CAAC,OAAO,CAAC,WAAW,EAAE;QAClC,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,WAAI,CAAC,CAAC,UAAU,CAAC,OAAO,CAAC,WAAW,MAAG,CAAC,CAAC;QACtE,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;KAClC;IACD,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;IAC/B,IAAI,CAAC,CAAC,UAAU,CAAC,MAAM,EAAE;QACrB,IAAM,MAAM,GAAG,CAAC,CAAC,UAAU,CAAC,MAAM,CAAC,KAAK,CAAC,EAAE,GAAG,CAAC,CAAC;QAChD,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,gBAAgB,CAAC,CAAC;QAC/C,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;QAC/B,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,IAAA,qBAAU,EAAC,MAAM,CAAC,CAAC,CAAC;QACjD,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;QAE/B,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,wBAAwB,CAAC,CAAC;QACvD,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;QAC/B,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,iBAAa,IAAI,CAAC,SAAS,CAAC,kCAAe,CAAC,gBAAgB,CAAC,MAAM,CAAC,EAAE,IAAI,EAAE,CAAC,CAAC,UAAU,CAAC,CAAC;QACvH,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;KAClC;IACD,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,8BAA8B,CAAC,CAAC;IAC7D,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AACnC,CAAC;AAED,IAAM,YAAY,GAAG,4BAAgB,CAAC,MAAM,EAAE,CAAC;AAE/C,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,2CAA2C,CAAC,CAAC;AAC1E,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AAC/B,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AAC/B,YAAY,CAAC,OAAO,CAAC,UAAA,CAAC;IAClB,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,aAAM,CAAC,CAAC,EAAE,gBAAM,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,GAAG,EAAE,GAAG,CAAC,MAAG,CAAC,CAAC;IACxE,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AACnC,CAAC,CAAC,CAAC;AACH,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AAC/B,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,8BAA8B,CAAC,CAAC;AAC7D,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AAC/B,YAAY,CAAC,OAAO,CAAC,UAAA,CAAC,IAAI,OAAA,gBAAgB,CAAC,CAAC,CAAC,EAAnB,CAAmB,CAAC,CAAC;AAE/C,EAAE,CAAC,aAAa,CAAC,0BAA0B,EAAE,wBAAa,CAAC,SAAS,CAAC,OAAO,CAAC,CAAC,CAAC"}

package/lib/commonjs/cli/state-docs/pd-to-md.js

@@ -18,7 +18,7 @@ function paramInfo(param, offset) {
         case 'number': return 'Numeric value';
         case 'converted': return paramInfo(param.converted, offset);
         case 'conditioned': return getParams(param.conditionParams, offset);
-        case 'multi-select': return "Array of " + oToS(param.options);
+        case 'multi-select': return "Array of ".concat(oToS(param.options));
         case 'color': return 'Color as 0xrrggbb';
         case 'color-list': return "A list of colors as 0xrrggbb";
         case 'vec3': return "3D vector [x, y, z]";
@@ -26,25 +26,25 @@ function paramInfo(param, offset) {
         case 'url': return "URL couple with unique identifier";
         case 'file': return "JavaScript File Handle";
         case 'file-list': return "JavaScript FileList Handle";
-        case 'select': return "One of " + oToS(param.options);
+        case 'select': return "One of ".concat(oToS(param.options));
         case 'value-ref': return "Reference to a runtime defined value.";
         case 'data-ref': return "Reference to a computed data value.";
         case 'text': return 'String';
         case 'interval': return "Interval [min, max]";
-        case 'group': return "Object with:\n" + getParams(param.params, offset + 2);
-        case 'mapped': return "Object { name: string, params: object } where name+params are:\n" + getMapped(param, offset + 2);
+        case 'group': return "Object with:\n".concat(getParams(param.params, offset + 2));
+        case 'mapped': return "Object { name: string, params: object } where name+params are:\n".concat(getMapped(param, offset + 2));
         case 'line-graph': return "A list of 2d vectors [xi, yi][]";
-        case 'object-list': return "Array of\n" + paramInfo(param_definition_1.ParamDefinition.Group(param.element), offset + 2);
+        case 'object-list': return "Array of\n".concat(paramInfo(param_definition_1.ParamDefinition.Group(param.element), offset + 2));
         // TODO: support more languages
         case 'script': return "An expression in the specified language { language: 'mol-script', expressiong: string }";
         default:
             var _ = param;
-            console.warn(_ + " has no associated UI component");
+            console.warn("".concat(_, " has no associated UI component"));
             return '';
     }
 }
 function oToS(options) {
-    return options.map(function (o) { return "'" + o[0] + "'"; }).join(', ');
+    return options.map(function (o) { return "'".concat(o[0], "'"); }).join(', ');
 }
 function offsetS(n) {
     return new Array(n + 1).join(' ') + '- ';
@@ -54,7 +54,7 @@ function getMapped(param, offset) {
     for (var _i = 0, _a = param.select.options; _i < _a.length; _i++) {
         var n = _a[_i][0];
         ret += offsetS(offset);
-        ret += "**" + n + "**:\n";
+        ret += "**".concat(n, "**:\n");
         ret += paramInfo(param.map(n), offset + 2);
         ret += '\n';
     }
@@ -66,12 +66,12 @@ function getParams(params, offset) {
         var k = _a[_i];
         var param = params[k];
         ret += offsetS(offset);
-        ret += "**" + k + "**" + (param.isOptional ? '?:' : ':') + " " + paramInfo(param, offset);
+        ret += "**".concat(k, "**").concat(param.isOptional ? '?:' : ':', " ").concat(paramInfo(param, offset));
         // if (param.defaultValue) {
         //     ret += ` = ${JSON.stringify(param.defaultValue)}`;
         // }
         if (param.description) {
-            ret += " *(" + param.description + ")*";
+            ret += " *(".concat(param.description, ")*");
         }
         ret += '\n';
     }

package/lib/commonjs/cli/state-docs/pd-to-md.js.map

@@ -1 +1 @@
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package/lib/commonjs/cli/structure-info/model.js

@@ -26,7 +26,7 @@ function downloadFromPdb(pdb) {
         var parsed;
         return (0, tslib_1.__generator)(this, function (_a) {
             switch (_a.label) {
-                case 0: return [4 /*yield*/, (0, helpers_1.downloadCif)("http://www.ebi.ac.uk/pdbe/static/entry/" + pdb + "_updated.cif", false)];
+                case 0: return [4 /*yield*/, (0, helpers_1.downloadCif)("http://www.ebi.ac.uk/pdbe/static/entry/".concat(pdb, "_updated.cif"), false)];
                 case 1:
                     parsed = _a.sent();
                     return [2 /*return*/, parsed.blocks[0]];
@@ -55,7 +55,7 @@ function atomLabel(model, aI) {
     var label_asym_id = chains.label_asym_id;
     var rI = residueAtomSegments.index[aI];
     var cI = chainAtomSegments.index[aI];
-    return label_asym_id.value(cI) + " " + label_comp_id.value(aI) + " " + label_seq_id.value(rI) + " " + label_atom_id.value(aI);
+    return "".concat(label_asym_id.value(cI), " ").concat(label_comp_id.value(aI), " ").concat(label_seq_id.value(rI), " ").concat(label_atom_id.value(aI));
 }
 exports.atomLabel = atomLabel;
 function residueLabel(model, rI) {
@@ -65,7 +65,7 @@ function residueLabel(model, rI) {
     var label_asym_id = chains.label_asym_id;
     var aI = residueAtomSegments.offsets[rI];
     var cI = chainAtomSegments.index[aI];
-    return label_asym_id.value(cI) + " " + label_comp_id.value(aI) + " " + label_seq_id.value(rI);
+    return "".concat(label_asym_id.value(cI), " ").concat(label_comp_id.value(aI), " ").concat(label_seq_id.value(rI));
 }
 exports.residueLabel = residueLabel;
 function printSecStructure(model) {
@@ -84,7 +84,7 @@ function printSecStructure(model) {
         rI--;
         var e = elements[key[start]];
         if (e.kind !== 'none')
-            console.log(e.kind + ": " + residueLabel(model, start) + " - " + residueLabel(model, rI));
+            console.log("".concat(e.kind, ": ").concat(residueLabel(model, start), " - ").concat(residueLabel(model, rI)));
         rI++;
     }
 }
@@ -105,7 +105,7 @@ function printBonds(structure, showIntra, showInter) {
                 var x = a[bI], y = b[bI];
                 if (x >= y)
                     continue;
-                console.log(atomLabel(model, elements[x]) + " -- " + atomLabel(model, elements[y]));
+                console.log("".concat(atomLabel(model, elements[x]), " -- ").concat(atomLabel(model, elements[y])));
             }
         }
     }
@@ -123,12 +123,12 @@ function printBonds(structure, showIntra, showInter) {
                 var unitA = pairBonds.unitA, unitB = pairBonds.unitB, edgeCount = pairBonds.edgeCount;
                 var uA = structure.unitMap.get(unitA);
                 var uB = structure.unitMap.get(unitB);
-                console.log(unitA + " - " + unitB + ": " + edgeCount + " bond(s)");
+                console.log("".concat(unitA, " - ").concat(unitB, ": ").concat(edgeCount, " bond(s)"));
                 for (var _h = 0, _k = pairBonds.connectedIndices; _h < _k.length; _h++) {
                     var aI = _k[_h];
                     for (var _l = 0, _m = pairBonds.getEdges(aI); _l < _m.length; _l++) {
                         var bond = _m[_l];
-                        console.log(atomLabel(uA.model, uA.elements[aI]) + " -- " + atomLabel(uB.model, uB.elements[bond.indexB]));
+                        console.log("".concat(atomLabel(uA.model, uA.elements[aI]), " -- ").concat(atomLabel(uB.model, uB.elements[bond.indexB])));
                     }
                 }
             }
@@ -143,8 +143,8 @@ function printSequence(model) {
         var key = _b[_a];
         var _c = byEntityKey[+key], sequence = _c.sequence, entityId = _c.entityId;
         var seqId = sequence.seqId, compId = sequence.compId;
-        console.log(entityId + " (" + sequence.kind + " " + seqId.value(0) + ", " + seqId.value(seqId.rowCount - 1) + ") (" + compId.value(0) + ", " + compId.value(compId.rowCount - 1) + ")");
-        console.log("" + sequence_1.Sequence.getSequenceString(sequence));
+        console.log("".concat(entityId, " (").concat(sequence.kind, " ").concat(seqId.value(0), ", ").concat(seqId.value(seqId.rowCount - 1), ") (").concat(compId.value(0), ", ").concat(compId.value(compId.rowCount - 1), ")"));
+        console.log("".concat(sequence_1.Sequence.getSequenceString(sequence)));
     }
     console.log();
 }
@@ -162,7 +162,7 @@ function printRings(structure) {
         }
         if (all.length > 5)
             fps.push('...');
-        console.log("Unit " + unit.id + ", " + all.length + " ring(s), " + byFingerprint.size + " different fingerprint(s).\n  " + fps.join(', '));
+        console.log("Unit ".concat(unit.id, ", ").concat(all.length, " ring(s), ").concat(byFingerprint.size, " different fingerprint(s).\n  ").concat(fps.join(', ')));
     }
     console.log();
 }
@@ -176,10 +176,10 @@ function printUnits(structure) {
         var elements = unit.elements;
         var size = int_1.OrderedSet.size(elements);
         if (structure_1.Unit.isAtomic(l.unit)) {
-            console.log("Atomic unit " + unit.id + " " + unit.conformation.operator.name + ": " + size + " elements");
+            console.log("Atomic unit ".concat(unit.id, " ").concat(unit.conformation.operator.name, ": ").concat(size, " elements"));
         }
         else if (structure_1.Unit.isCoarse(l.unit)) {
-            console.log("Coarse unit " + unit.id + " " + unit.conformation.operator.name + " (" + (structure_1.Unit.isSpheres(l.unit) ? 'spheres' : 'gaussians') + "): " + size + " elements.");
+            console.log("Coarse unit ".concat(unit.id, " ").concat(unit.conformation.operator.name, " (").concat(structure_1.Unit.isSpheres(l.unit) ? 'spheres' : 'gaussians', "): ").concat(size, " elements."));
             var props = structure_1.StructureProperties.coarse;
             var modelSeq = l.unit.model.sequence;
             for (var j = 0, _j = Math.min(size, 3); j < _j; j++) {
@@ -189,7 +189,7 @@ function printUnits(structure) {
                 var compId = modelSeq.byEntityKey[props.entityKey(l)].sequence.compId.value;
                 for (var e = start; e <= end; e++)
                     residues.push(compId(e));
-                console.log(props.asym_id(l) + ":" + start + "-" + end + " (" + residues.join('-') + ") " + props.asym_id(l) + " [" + props.x(l).toFixed(2) + ", " + props.y(l).toFixed(2) + ", " + props.z(l).toFixed(2) + "]");
+                console.log("".concat(props.asym_id(l), ":").concat(start, "-").concat(end, " (").concat(residues.join('-'), ") ").concat(props.asym_id(l), " [").concat(props.x(l).toFixed(2), ", ").concat(props.y(l).toFixed(2), ", ").concat(props.z(l).toFixed(2), "]"));
             }
             if (size > 3)
                 console.log("...");
@@ -203,10 +203,10 @@ function printSymmetryInfo(model) {
     if (!symmetry)
         return;
     var _a = symmetry.spacegroup.cell, size = _a.size, anglesInRadians = _a.anglesInRadians;
-    console.log("Spacegroup: " + symmetry.spacegroup.name + " size: " + linear_algebra_1.Vec3.toString(size) + " angles: " + linear_algebra_1.Vec3.toString(anglesInRadians));
-    console.log("Assembly names: " + symmetry.assemblies.map(function (a) { return a.id; }).join(', '));
+    console.log("Spacegroup: ".concat(symmetry.spacegroup.name, " size: ").concat(linear_algebra_1.Vec3.toString(size), " angles: ").concat(linear_algebra_1.Vec3.toString(anglesInRadians)));
+    console.log("Assembly names: ".concat(symmetry.assemblies.map(function (a) { return a.id; }).join(', ')));
     // NCS example: 1auy
-    console.log("NCS operators: " + (symmetry.ncsOperators && symmetry.ncsOperators.map(function (a) { return a.name; }).join(', ')));
+    console.log("NCS operators: ".concat(symmetry.ncsOperators && symmetry.ncsOperators.map(function (a) { return a.name; }).join(', ')));
 }
 exports.printSymmetryInfo = printSymmetryInfo;
 function printModelStats(models) {
@@ -224,10 +224,10 @@ function printModelStats(models) {
                 case 2:
                     m = _a.sent();
                     if (m.coarseHierarchy.isDefined) {
-                        console.log(m.label + " " + m.modelNum + ": " + m.atomicHierarchy.atoms._rowCount + " atom(s), " + m.coarseHierarchy.spheres.count + " sphere(s), " + m.coarseHierarchy.gaussians.count + " gaussian(s)");
+                        console.log("".concat(m.label, " ").concat(m.modelNum, ": ").concat(m.atomicHierarchy.atoms._rowCount, " atom(s), ").concat(m.coarseHierarchy.spheres.count, " sphere(s), ").concat(m.coarseHierarchy.gaussians.count, " gaussian(s)"));
                     }
                     else {
-                        console.log(m.label + " " + m.modelNum + ": " + m.atomicHierarchy.atoms._rowCount + " atom(s)");
+                        console.log("".concat(m.label, " ").concat(m.modelNum, ": ").concat(m.atomicHierarchy.atoms._rowCount, " atom(s)"));
                     }
                     _a.label = 3;
                 case 3:

package/lib/commonjs/cli/structure-info/model.js.map

@@ -1 +1 @@
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package/lib/commonjs/cli/structure-info/volume.js

@@ -111,5 +111,5 @@ parser.add_argument('--mesh', {
     required: true
 });
 var args = parser.parse_args();
-run("https://ds.litemol.org/em/emd-" + args.emdb + "/cell?detail=4", args.mesh);
+run("https://ds.litemol.org/em/emd-".concat(args.emdb, "/cell?detail=4"), args.mesh);
 //# sourceMappingURL=volume.js.map

package/lib/commonjs/cli/structure-info/volume.js.map

@@ -1 +1 @@
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+{"version":3,"file":"volume.js","sourceRoot":"","sources":["../../../../src/cli/structure-info/volume.ts"],"names":[],"mappings":";;AACA;;;;GAIG;;;AAEH,kDAAyB;AACzB,8DAAqC;AACrC,sDAA6B;AAE7B,iDAAgD;AAChD,qCAAwC;AACxC,+CAA8C;AAC9C,wCAA0C;AAC1C,2CAA+C;AAC/C,2CAAsC;AACtC,+DAA8E;AAC9E,+CAA8C;AAC9C,gFAAyG;AAEzG,OAAO,CAAC,gBAAgB,CAAC,CAAC,IAAI,EAAE,CAAC;AACjC,IAAM,cAAc,GAAG,IAAI,CAAC,SAAS,CAAC,EAAE,CAAC,SAAS,CAAC,CAAC;AAEpD,SAAe,SAAS,CAAC,GAAW;;;;;wBACpB,qBAAM,IAAA,qBAAW,EAAC,GAAG,EAAE,IAAI,CAAC,EAAA;;oBAAlC,GAAG,GAAG,SAA4B;oBAClC,IAAI,GAAG,SAAG,CAAC,MAAM,CAAC,aAAa,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC;oBAC9C,qBAAM,IAAA,4CAA2B,EAAC,IAAI,CAAC,CAAC,GAAG,EAAE,EAAA;wBAApD,sBAAO,SAA6C,EAAC;;;;CACxD;AAED,SAAS,KAAK,CAAC,MAAc;IACzB,IAAI,CAAC,4BAAW,CAAC,EAAE,CAAC,MAAM,CAAC,UAAU,CAAC;QAAE,OAAO;IACvC,IAAA,mBAAmB,GAAK,MAAM,CAAC,UAAU,CAAC,IAAI,oBAA3B,CAA4B;IACvD,IAAM,GAAG,GAAG,UAAK,CAAC,MAAM,CAAC,mBAAmB,EAAE,CAAC,CAAC,CAAC;IACjD,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;IACjB,OAAO,CAAC,GAAG,CAAC,MAAM,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;IACnC,OAAO,CAAC,GAAG,CAAC,MAAM,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;AACnC,CAAC;AAED,SAAe,MAAM,CAAC,MAAc,EAAE,QAAgB;;;;;wBACrC,qBAAM,eAAI,CAAC,MAAM,CAAC,EAAE,EAAE,UAAA,OAAO,IAAI,OAAA,IAAA,uCAA0B,EAAC,EAAE,OAAO,SAAA,EAAE,EAAE,MAAM,EAAE,aAAK,CAAC,WAAW,EAAE,EAAE,EAAE,QAAQ,EAAE,eAAM,CAAC,QAAQ,CAAC,QAAQ,CAAC,GAAG,CAAC,EAAE,CAAC,EAAjH,CAAiH,CAAC,CAAC,GAAG,EAAE,EAAA;;oBAAhK,IAAI,GAAG,SAAyJ;oBACtK,OAAO,CAAC,GAAG,CAAC,EAAE,EAAE,EAAE,IAAI,CAAC,WAAW,EAAE,EAAE,EAAE,IAAI,CAAC,aAAa,EAAE,CAAC,CAAC;oBAGtD,WAAW,GAAoB,IAAI,YAAxB,EAAE,aAAa,GAAK,IAAI,cAAT,CAAU;oBAEtC,EAAE,GAAG,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,KAAK,CAAC;oBACjC,EAAE,GAAG,IAAI,CAAC,WAAW,CAAC,GAAG,CAAC,KAAK,CAAC;oBAEhC,GAAG,GAAG,wBAAa,CAAC,MAAM,EAAE,CAAC;oBACnC,KAAS,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,WAAW,EAAE,CAAC,EAAE,EAAE;wBAClC,wBAAa,CAAC,KAAK,CAAC,GAAG,EAAE,IAAI,CAAC,CAAC;wBAC/B,wBAAa,CAAC,UAAU,CAAC,GAAG,EAAE,EAAE,CAAC,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,EAAE,GAAG,CAAC,CAAC;wBAClD,wBAAa,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC;wBAC/B,wBAAa,CAAC,UAAU,CAAC,GAAG,EAAE,EAAE,CAAC,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,EAAE,GAAG,CAAC,CAAC;wBAClD,wBAAa,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC;wBAC/B,wBAAa,CAAC,UAAU,CAAC,GAAG,EAAE,EAAE,CAAC,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,EAAE,GAAG,CAAC,CAAC;wBAClD,wBAAa,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC;qBAC9B;oBACD,KAAS,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,aAAa,EAAE,CAAC,EAAE,EAAE;wBACpC,wBAAa,CAAC,KAAK,CAAC,GAAG,EAAE,IAAI,CAAC,CAAC;wBAC/B,wBAAa,CAAC,oBAAoB,CAAC,GAAG,EAAE,EAAE,CAAC,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;wBAC3D,wBAAa,CAAC,oBAAoB,CAAC,GAAG,EAAE,EAAE,CAAC,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;wBAC3D,wBAAa,CAAC,YAAY,CAAC,GAAG,EAAE,EAAE,CAAC,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;wBACnD,wBAAa,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC;qBAC9B;oBAED,qBAAM,cAAc,CAAC,QAAQ,EAAE,wBAAa,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC,EAAA;;oBAA5D,SAA4D,CAAC;;;;;CAChE;AAED,SAAe,GAAG,CAAC,GAAW,EAAE,YAAoB;;;;;wBACjC,qBAAM,SAAS,CAAC,GAAG,CAAC,EAAA;;oBAA7B,MAAM,GAAG,SAAoB;oBACnC,KAAK,CAAC,MAAM,CAAC,CAAC;oBACd,qBAAM,MAAM,CAAC,MAAM,EAAE,YAAY,CAAC,EAAA;;oBAAlC,SAAkC,CAAC;;;;;CACtC;AAED,IAAM,MAAM,GAAG,IAAI,QAAQ,CAAC,cAAc,CAAC;IACvC,QAAQ,EAAE,IAAI;IACd,WAAW,EAAE,6CAA6C;CAC7D,CAAC,CAAC;AACH,MAAM,CAAC,YAAY,CAAC,QAAQ,EAAE,IAAI,EAAE;IAChC,IAAI,EAAE,2BAA2B;CACpC,CAAC,CAAC;AACH,MAAM,CAAC,YAAY,CAAC,QAAQ,EAAE;IAC1B,IAAI,EAAE,eAAe;IACrB,QAAQ,EAAE,IAAI;CACjB,CAAC,CAAC;AAKH,IAAM,IAAI,GAAS,MAAM,CAAC,UAAU,EAAE,CAAC;AAEvC,GAAG,CAAC,wCAAiC,IAAI,CAAC,IAAI,mBAAgB,EAAE,IAAI,CAAC,IAAI,CAAC,CAAC"}

package/lib/commonjs/examples/basic-wrapper/superposition.js

@@ -26,13 +26,13 @@ function buildStaticSuperposition(plugin, src) {
                 case 1:
                     if (!(_i < src_1.length)) return [3 /*break*/, 7];
                     s = src_1[_i];
-                    return [4 /*yield*/, loadStructure(plugin, "https://www.ebi.ac.uk/pdbe/static/entry/" + s.pdbId + "_updated.cif", 'mmcif')];
+                    return [4 /*yield*/, loadStructure(plugin, "https://www.ebi.ac.uk/pdbe/static/entry/".concat(s.pdbId, "_updated.cif"), 'mmcif')];
                 case 2:
                     structure = (_a.sent()).structure;
                     return [4 /*yield*/, transform(plugin, structure, s.matrix)];
                 case 3:
                     _a.sent();
-                    return [4 /*yield*/, plugin.builders.structure.tryCreateComponentFromExpression(structure, chainSelection(s.auth_asym_id), "Chain " + s.auth_asym_id)];
+                    return [4 /*yield*/, plugin.builders.structure.tryCreateComponentFromExpression(structure, chainSelection(s.auth_asym_id), "Chain ".concat(s.auth_asym_id))];
                 case 4:
                     chain = _a.sent();
                     if (!chain) return [3 /*break*/, 6];
@@ -82,7 +82,7 @@ function dynamicSuperpositionTest(plugin, src, comp_id) {
                 case 1:
                     if (!(_i < src_2.length)) return [3 /*break*/, 4];
                     s = src_2[_i];
-                    return [4 /*yield*/, loadStructure(plugin, "https://www.ebi.ac.uk/pdbe/static/entry/" + s + "_updated.cif", 'mmcif')];
+                    return [4 /*yield*/, loadStructure(plugin, "https://www.ebi.ac.uk/pdbe/static/entry/".concat(s, "_updated.cif"), 'mmcif')];
                 case 2:
                     _a.sent();
                     _a.label = 3;

package/lib/commonjs/examples/basic-wrapper/superposition.js.map

@@ -1 +1 @@
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+{"version":3,"file":"superposition.js","sourceRoot":"","sources":["../../../../src/examples/basic-wrapper/superposition.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAEH,gEAAqD;AACrD,uDAA6E;AAC7E,wFAAmF;AAGnF,6DAA2E;AAE3E,oEAAkE;AAGlE,gEAAoE;AACpE,gDAA8C;AAQ9C,SAAgB,wBAAwB,CAAC,MAAqB,EAAE,GAA2B;IAA3F,iBASC;IARG,OAAO,MAAM,CAAC,eAAe,CAAC;;;;;0BACP,EAAH,WAAG;;;yBAAH,CAAA,iBAAG,CAAA;oBAAR,CAAC;oBACc,qBAAM,aAAa,CAAC,MAAM,EAAE,kDAA2C,CAAC,CAAC,KAAK,iBAAc,EAAE,OAAO,CAAC,EAAA;;oBAApH,SAAS,GAAK,CAAA,SAAsG,CAAA,UAA3G;oBACjB,qBAAM,SAAS,CAAC,MAAM,EAAE,SAAS,EAAE,CAAC,CAAC,MAAM,CAAC,EAAA;;oBAA5C,SAA4C,CAAC;oBAC/B,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,gCAAgC,CAAC,SAAS,EAAE,cAAc,CAAC,CAAC,CAAC,YAAY,CAAC,EAAE,gBAAS,CAAC,CAAC,YAAY,CAAE,CAAC,EAAA;;oBAA9I,KAAK,GAAG,SAAsI;yBAChJ,KAAK,EAAL,wBAAK;oBAAE,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,cAAc,CAAC,iBAAiB,CAAC,KAAK,EAAE,EAAE,IAAI,EAAE,SAAS,EAAE,CAAC,EAAA;;oBAA5F,SAA4F,CAAC;;;oBAJ5F,IAAG,CAAA;;;;;SAMtB,CAAC,CAAC;AACP,CAAC;AATD,4DASC;AAEY,QAAA,2BAA2B,GAA2B;IAC/D;QACI,KAAK,EAAE,MAAM,EAAE,YAAY,EAAE,GAAG,EAAE,MAAM,EAAE,qBAAI,CAAC,QAAQ,EAAE;KAC5D;IACD;QACI,KAAK,EAAE,MAAM,EAAE,YAAY,EAAE,GAAG,EAAE,MAAM,EAAE,qBAAI,CAAC,MAAM,CAAC;YAClD,CAAC,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,CAAC,OAAO,CAAC;YAC/B,CAAC,KAAK,EAAE,CAAC,KAAK,EAAE,KAAK,EAAE,MAAM,CAAC;YAC9B,CAAC,KAAK,EAAE,CAAC,KAAK,EAAE,CAAC,KAAK,EAAE,CAAC,MAAM,CAAC;YAChC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;SAAC,CAAC;KACrB;IACD;QACI,KAAK,EAAE,MAAM,EAAE,YAAY,EAAE,GAAG,EAAE,MAAM,EAAE,qBAAI,CAAC,MAAM,CAAC;YAClD,CAAC,CAAC,KAAK,EAAE,CAAC,KAAK,EAAE,KAAK,EAAE,CAAC,MAAM,CAAC;YAChC,CAAC,CAAC,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,CAAC,MAAM,CAAC;YAC/B,CAAC,CAAC,KAAK,EAAE,CAAC,KAAK,EAAE,CAAC,KAAK,EAAE,MAAM,CAAC;YAChC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;SAAC,CAAC;KACrB;CACJ,CAAC;AAEF,SAAgB,wBAAwB,CAAC,MAAqB,EAAE,GAAa,EAAE,OAAe;IAA9F,iBAiCC;IAhCG,OAAO,MAAM,CAAC,eAAe,CAAC;;;;;0BACP,EAAH,WAAG;;;yBAAH,CAAA,iBAAG,CAAA;oBAAR,CAAC;oBACR,qBAAM,aAAa,CAAC,MAAM,EAAE,kDAA2C,CAAC,iBAAc,EAAE,OAAO,CAAC,EAAA;;oBAAhG,SAAgG,CAAC;;;oBADrF,IAAG,CAAA;;;oBAIb,KAAK,GAAG,0BAAE,CAAC,MAAM,CAAC,MAAM,CAAC,KAAK,CAAC;wBACjC,0BAAE,CAAC,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC;4BAC3B,cAAc,EAAE,0BAAE,CAAC,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC,0BAAE,CAAC,MAAM,CAAC,YAAY,CAAC,cAAc,CAAC,aAAa,EAAE,EAAE,OAAO,CAAC,CAAC;4BAChG,UAAU,EAAE,0BAAE,CAAC,MAAM,CAAC,YAAY,CAAC,cAAc,CAAC,UAAU,EAAE;yBACjE,CAAC;qBACL,CAAC,CAAC;oBAEG,IAAI,GAAG,0BAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,QAAQ,CAAC;wBACrC,CAAC,EAAE,0BAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,mBAAmB,CAAC;4BACtC,CAAC,EAAE,KAAK;4BACR,MAAM,EAAE,CAAC;yBACZ,CAAC;wBACF,EAAE,EAAE,KAAK;qBACZ,CAAC,CAAC;oBAEG,KAAK,GAAG,IAAA,kBAAO,EAAqB,KAAK,CAAC,CAAC;oBAC3C,EAAE,GAAG,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,SAAS,CAAC,OAAO,CAAC,UAAU,CAAC;oBAC5D,UAAU,GAAG,EAAE,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,8BAAkB,CAAC,sBAAsB,CAAC,KAAK,CAAC,IAAI,wBAAY,CAAC,CAAC,CAAC,IAAI,CAAC,GAAI,CAAC,IAAI,CAAC,CAAC,CAAC,EAApF,CAAoF,CAAC,CAAC;oBAE/G,UAAU,GAAG,IAAA,yBAAS,EAAC,UAAU,CAAC,CAAC;oBAEzC,qBAAM,UAAU,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,EAAE,KAAK,EAAE,IAAI,CAAC,EAAA;;oBAAjD,SAAiD,CAAC;oBACzC,CAAC,GAAG,CAAC;;;yBAAE,CAAA,CAAC,GAAG,UAAU,CAAC,MAAM,CAAA;oBACjC,qBAAM,SAAS,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,EAAE,UAAU,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,UAAU,CAAC,EAAA;;oBAAjE,SAAiE,CAAC;oBAClE,qBAAM,UAAU,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,EAAE,KAAK,EAAE,IAAI,CAAC,EAAA;;oBAAjD,SAAiD,CAAC;;;oBAFf,CAAC,EAAE,CAAA;;;;;SAI7C,CAAC,CAAC;AACP,CAAC;AAjCD,4DAiCC;AAED,SAAe,UAAU,CAAC,MAAqB,EAAE,CAAyC,EAAE,KAAiB,EAAE,IAAgB;;;;;wBAC5G,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,gCAAgC,CAAC,CAAC,EAAE,KAAK,EAAE,OAAO,CAAC,EAAA;;oBAA5F,MAAM,GAAG,SAAmF;yBAC9F,MAAM,EAAN,wBAAM;oBAAE,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,cAAc,CAAC,iBAAiB,CAAC,MAAM,EAAE,EAAE,IAAI,EAAE,gBAAgB,EAAE,KAAK,EAAE,cAAc,EAAE,CAAC,EAAA;;oBAA3H,SAA2H,CAAC;;wBAE3H,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,gCAAgC,CAAC,CAAC,EAAE,IAAI,EAAE,MAAM,CAAC,EAAA;;oBAAxF,IAAI,GAAG,SAAiF;yBAC1F,IAAI,EAAJ,wBAAI;oBAAE,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,cAAc,CAAC,iBAAiB,CAAC,IAAI,EAAE,EAAE,IAAI,EAAE,gBAAgB,EAAE,KAAK,EAAE,SAAS,EAAE,IAAI,EAAE,SAAS,EAAE,UAAU,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,EAAE,CAAC,EAAA;;oBAAlK,SAAkK,CAAC;;;;;;CAChL;AAED,SAAe,aAAa,CAAC,MAAqB,EAAE,GAAW,EAAE,MAA+B,EAAE,UAAmB;;;;;wBACpG,qBAAM,MAAM,CAAC,QAAQ,CAAC,IAAI,CAAC,QAAQ,CAAC,EAAE,GAAG,EAAE,cAAK,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE,CAAC,EAAA;;oBAAnE,IAAI,GAAG,SAA4D;oBACtD,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,eAAe,CAAC,IAAI,EAAE,MAAM,CAAC,EAAA;;oBAA1E,UAAU,GAAG,SAA6D;oBAClE,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,WAAW,CAAC,UAAU,CAAC,EAAA;;oBAA/D,KAAK,GAAG,SAAuD;oBACnD,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,eAAe,CAAC,KAAK,EAAE,UAAU,CAAC,CAAC,CAAC,EAAE,IAAI,EAAE,UAAU,EAAE,MAAM,EAAE,EAAE,EAAE,EAAE,UAAU,EAAE,EAAE,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,EAAA;;oBAA1I,SAAS,GAAG,SAA8H;oBAEhJ,sBAAO,EAAE,IAAI,MAAA,EAAE,UAAU,YAAA,EAAE,KAAK,OAAA,EAAE,SAAS,WAAA,EAAE,EAAC;;;;CACjD;AAED,SAAS,cAAc,CAAC,YAAoB;IACxC,OAAO,0BAAE,CAAC,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC;QAClC,YAAY,EAAE,0BAAE,CAAC,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC,0BAAE,CAAC,MAAM,CAAC,YAAY,CAAC,cAAc,CAAC,YAAY,EAAE,EAA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package/lib/commonjs/examples/domain-annotation-server/mapping.js

@@ -32,8 +32,8 @@ exports.createMapping = createMapping;
 function writeDomain(enc, domain) {
     if (!domain)
         return;
-    enc.writeCategory({ name: "pdbx_" + domain.name + "_domain_annotation", instance: function () { return cif_1.CifWriter.Category.ofTable(domain.domains); } });
-    enc.writeCategory({ name: "pdbx_" + domain.name + "_domain_mapping", instance: function () { return cif_1.CifWriter.Category.ofTable(domain.mappings); } });
+    enc.writeCategory({ name: "pdbx_".concat(domain.name, "_domain_annotation"), instance: function () { return cif_1.CifWriter.Category.ofTable(domain.domains); } });
+    enc.writeCategory({ name: "pdbx_".concat(domain.name, "_domain_mapping"), instance: function () { return cif_1.CifWriter.Category.ofTable(domain.mappings); } });
 }
 function getSources(data) {
     var rows = [];

package/lib/commonjs/examples/domain-annotation-server/mapping.js.map

@@ -1 +1 @@
-{"version":3,"file":"mapping.js","sourceRoot":"","sources":["../../../../src/examples/domain-annotation-server/mapping.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAEH,wCAA0C;AAC1C,+CAAoD;AACpD,wDAA+B;AAC/B,wDAAwD;AAExD,SAAgB,aAAa,CAAC,OAAY;IACtC,IAAM,IAAI,GAAG,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;IAClC,IAAM,GAAG,GAAG,eAAS,CAAC,aAAa,EAAE,CAAC;IACtC,GAAG,CAAC,cAAc,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IAE5B,IAAI,CAAC,IAAI,CAAC,MAAM;QAAE,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;IAEvC,IAAM,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IAE9B,IAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAC;IACjC,IAAI,CAAC,OAAO,CAAC,SAAS;QAAE,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;IAE7C,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,gCAAgC,EAAE,QAAQ,EAAE,cAAM,OAAA,eAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,OAAO,CAAC,EAAnC,CAAmC,EAAE,CAAC,CAAC;IAEnH,KAAkB,UAAyB,EAAzB,KAAA,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,UAAU,CAAC,EAAzB,cAAyB,EAAzB,IAAyB,EAAE;QAAxC,IAAM,GAAG,SAAA;QACV,WAAW,CAAC,GAAG,EAAE,SAAS,CAAC,GAAG,EAAG,CAAC,CAAC,UAAkB,CAAC,GAAG,CAAC,EAAE,IAAI,CAAC,CAAC,CAAC;KACtE;IACD,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;AACzB,CAAC;AAlBD,sCAkBC;AASD,SAAS,WAAW,CAAC,GAAsB,EAAE,MAAoC;IAC7E,IAAI,CAAC,MAAM;QAAE,OAAO;IACpB,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,UAAQ,MAAM,CAAC,IAAI,uBAAoB,EAAE,QAAQ,EAAE,cAAM,OAAA,eAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,CAAC,EAA1C,CAA0C,EAAE,CAAC,CAAC;IACjI,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,UAAQ,MAAM,CAAC,IAAI,oBAAiB,EAAE,QAAQ,EAAE,cAAM,OAAA,eAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC,QAAQ,CAAC,EAA3C,CAA2C,EAAE,CAAC,CAAC;AACnI,CAAC;AAED,SAAS,UAAU,CAAC,IAAS;IACzB,IAAM,IAAI,GAA2B,EAAE,CAAC;IACxC,KAAmB,UAAyB,EAAzB,KAAA,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,UAAU,CAAC,EAAzB,cAAyB,EAAzB,IAAyB,EAAE;QAAzC,IAAM,MAAI,SAAA;QACX,IAAI,CAAC,IAAI,CAAC,MAAI,CAAC;YAAE,SAAS;QAC1B,IAAM,GAAG,GAAyB,EAAE,EAAE,EAAE,MAAI,EAAE,KAAK,EAAE,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,MAAI,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC;QACtF,IAAI,GAAG,CAAC,KAAK,GAAG,CAAC;YAAE,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;KACrC;IACD,OAAO,UAAK,CAAC,MAAM,CAAC,CAAC,CAAC,OAAO,EAAE,IAAI,CAAC,CAAC;AACzC,CAAC;AAED,SAAS,WAAW,CAAC,OAAe,EAAE,QAAgB,EAAE,QAAa;IACjE,IAAM,IAAI,GAAiB,EAAE,CAAC;IAE9B,IAAM,CAAC,GAAG,UAAC,CAAM,IAAK,OAAA,CAAC,KAAK,IAAI,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,EAAvB,CAAuB,CAAC;IAE9C,KAAoB,UAAQ,EAAR,qBAAQ,EAAR,sBAAQ,EAAR,IAAQ,EAAE;QAAzB,IAAM,KAAK,iBAAA;QACZ,IAAI,KAAK,CAAC,KAAK,IAAI,KAAK,CAAC,GAAG,EAAE;YAC1B,IAAI,CAAC,IAAI,CAAC;gBACN,EAAE,EAAE,OAAO,EAAE;gBACb,QAAQ,UAAA;gBACR,eAAe,EAAE,EAAE,GAAG,KAAK,CAAC,SAAS;gBACrC,aAAa,EAAE,KAAK,CAAC,cAAc;gBACnC,YAAY,EAAE,KAAK,CAAC,QAAQ;gBAC5B,gBAAgB,EAAE,CAAC,CAAC,KAAK,CAAC,KAAK,CAAC,cAAc,CAAC;gBAC/C,eAAe,EAAE,CAAC,CAAC,KAAK,CAAC,KAAK,CAAC,qBAAqB,CAAC;gBACrD,qBAAqB,EAAE,KAAK,CAAC,KAAK,CAAC,qBAAqB;gBACxD,gBAAgB,EAAE,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,cAAc,CAAC;gBAC7C,eAAe,EAAE,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,qBAAqB,CAAC;gBACnD,qBAAqB,EAAE,KAAK,CAAC,GAAG,CAAC,qBAAqB;aACzD,CAAC,CAAC;SACN;aAAM;YACH,IAAI,CAAC,IAAI,CAAC;gBACN,EAAE,EAAE,OAAO,EAAE;gBACb,QAAQ,UAAA;gBACR,eAAe,EAAE,EAAE,GAAG,KAAK,CAAC,SAAS;gBACrC,aAAa,EAAE,KAAK,CAAC,cAAc;gBACnC,YAAY,EAAE,KAAK,CAAC,QAAQ;aACxB,CAAC,CAAC;SACb;KACJ;IACD,OAAO,IAAI,CAAC;AAChB,CAAC;AAED,SAAS,aAAa,CAAC,EAAU,EAAE,gBAAwB,EAAE,IAAS,EAAE,MAAW;IAC/E,IAAM,KAAK,GAAG,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;IAClC,KAAgB,UAAmB,EAAnB,KAAA,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,EAAnB,cAAmB,EAAnB,IAAmB;QAA9B,IAAM,CAAC,SAAA;QAAyB,KAAK,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC;KAAA;IACxD,+BAAS,EAAE,IAAA,EAAE,gBAAgB,kBAAA,EAAE,UAAU,EAAE,IAAI,CAAC,UAAU,IAAK,KAAK,EAAG;AAC3E,CAAC;AAED,SAAS,SAAS,CAAC,IAAY,EAAE,MAAW,EAAE,OAAY;IACtD,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC;QAAE,OAAO,KAAK,CAAC,CAAC;IAElC,IAAM,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC;IAE3B,IAAM,OAAO,GAAU,EAAE,CAAC;IAC1B,IAAM,QAAQ,GAAiB,EAAE,CAAC;IAElC,IAAI,eAAe,GAAG,CAAC,EAAE,gBAAgB,GAAG,CAAC,CAAC;IAE9C,KAAiB,UAAiB,EAAjB,KAAA,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,EAAjB,cAAiB,EAAjB,IAAiB,EAAE;QAA/B,IAAM,EAAE,SAAA;QACT,IAAM,MAAM,GAAG,IAAI,CAAC,EAAE,CAAC,CAAC;QACxB,OAAO,CAAC,IAAI,CAAC,aAAa,CAAC,EAAE,EAAE,gBAAgB,EAAE,MAAM,EAAE,MAAM,CAAC,CAAC,CAAC;QAClE,QAAQ,CAAC,IAAI,OAAb,QAAQ,EAAS,WAAW,CAAC,eAAe,EAAE,gBAAgB,EAAE,MAAM,CAAC,QAAQ,CAAC,EAAE;QAClF,eAAe,GAAG,QAAQ,CAAC,MAAM,GAAG,CAAC,CAAC;QACtC,gBAAgB,EAAE,CAAC;KACtB;IAED,OAAO,OAAO,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC;QACxB,IAAI,MAAA;QACJ,OAAO,EAAE,UAAK,CAAC,MAAM,iDAAM,CAAC,CAAC,IAAI,GAAK,MAAM,GAAI,OAAO,CAAC;QACxD,QAAQ,EAAE,UAAK,CAAC,MAAM,CAAY,CAAC,CAAC,OAAO,EAAE,QAAQ,CAAC;KACzD,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;AACf,CAAC"}
+{"version":3,"file":"mapping.js","sourceRoot":"","sources":["../../../../src/examples/domain-annotation-server/mapping.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAEH,wCAA0C;AAC1C,+CAAoD;AACpD,wDAA+B;AAC/B,wDAAwD;AAExD,SAAgB,aAAa,CAAC,OAAY;IACtC,IAAM,IAAI,GAAG,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;IAClC,IAAM,GAAG,GAAG,eAAS,CAAC,aAAa,EAAE,CAAC;IACtC,GAAG,CAAC,cAAc,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IAE5B,IAAI,CAAC,IAAI,CAAC,MAAM;QAAE,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;IAEvC,IAAM,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IAE9B,IAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAC;IACjC,IAAI,CAAC,OAAO,CAAC,SAAS;QAAE,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;IAE7C,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,gCAAgC,EAAE,QAAQ,EAAE,cAAM,OAAA,eAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,OAAO,CAAC,EAAnC,CAAmC,EAAE,CAAC,CAAC;IAEnH,KAAkB,UAAyB,EAAzB,KAAA,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,UAAU,CAAC,EAAzB,cAAyB,EAAzB,IAAyB,EAAE;QAAxC,IAAM,GAAG,SAAA;QACV,WAAW,CAAC,GAAG,EAAE,SAAS,CAAC,GAAG,EAAG,CAAC,CAAC,UAAkB,CAAC,GAAG,CAAC,EAAE,IAAI,CAAC,CAAC,CAAC;KACtE;IACD,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;AACzB,CAAC;AAlBD,sCAkBC;AASD,SAAS,WAAW,CAAC,GAAsB,EAAE,MAAoC;IAC7E,IAAI,CAAC,MAAM;QAAE,OAAO;IACpB,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,eAAQ,MAAM,CAAC,IAAI,uBAAoB,EAAE,QAAQ,EAAE,cAAM,OAAA,eAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,CAAC,EAA1C,CAA0C,EAAE,CAAC,CAAC;IACjI,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,eAAQ,MAAM,CAAC,IAAI,oBAAiB,EAAE,QAAQ,EAAE,cAAM,OAAA,eAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC,QAAQ,CAAC,EAA3C,CAA2C,EAAE,CAAC,CAAC;AACnI,CAAC;AAED,SAAS,UAAU,CAAC,IAAS;IACzB,IAAM,IAAI,GAA2B,EAAE,CAAC;IACxC,KAAmB,UAAyB,EAAzB,KAAA,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,UAAU,CAAC,EAAzB,cAAyB,EAAzB,IAAyB,EAAE;QAAzC,IAAM,MAAI,SAAA;QACX,IAAI,CAAC,IAAI,CAAC,MAAI,CAAC;YAAE,SAAS;QAC1B,IAAM,GAAG,GAAyB,EAAE,EAAE,EAAE,MAAI,EAAE,KAAK,EAAE,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,MAAI,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC;QACtF,IAAI,GAAG,CAAC,KAAK,GAAG,CAAC;YAAE,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;KACrC;IACD,OAAO,UAAK,CAAC,MAAM,CAAC,CAAC,CAAC,OAAO,EAAE,IAAI,CAAC,CAAC;AACzC,CAAC;AAED,SAAS,WAAW,CAAC,OAAe,EAAE,QAAgB,EAAE,QAAa;IACjE,IAAM,IAAI,GAAiB,EAAE,CAAC;IAE9B,IAAM,CAAC,GAAG,UAAC,CAAM,IAAK,OAAA,CAAC,KAAK,IAAI,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,EAAvB,CAAuB,CAAC;IAE9C,KAAoB,UAAQ,EAAR,qBAAQ,EAAR,sBAAQ,EAAR,IAAQ,EAAE;QAAzB,IAAM,KAAK,iBAAA;QACZ,IAAI,KAAK,CAAC,KAAK,IAAI,KAAK,CAAC,GAAG,EAAE;YAC1B,IAAI,CAAC,IAAI,CAAC;gBACN,EAAE,EAAE,OAAO,EAAE;gBACb,QAAQ,UAAA;gBACR,eAAe,EAAE,EAAE,GAAG,KAAK,CAAC,SAAS;gBACrC,aAAa,EAAE,KAAK,CAAC,cAAc;gBACnC,YAAY,EAAE,KAAK,CAAC,QAAQ;gBAC5B,gBAAgB,EAAE,CAAC,CAAC,KAAK,CAAC,KAAK,CAAC,cAAc,CAAC;gBAC/C,eAAe,EAAE,CAAC,CAAC,KAAK,CAAC,KAAK,CAAC,qBAAqB,CAAC;gBACrD,qBAAqB,EAAE,KAAK,CAAC,KAAK,CAAC,qBAAqB;gBACxD,gBAAgB,EAAE,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,cAAc,CAAC;gBAC7C,eAAe,EAAE,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,qBAAqB,CAAC;gBACnD,qBAAqB,EAAE,KAAK,CAAC,GAAG,CAAC,qBAAqB;aACzD,CAAC,CAAC;SACN;aAAM;YACH,IAAI,CAAC,IAAI,CAAC;gBACN,EAAE,EAAE,OAAO,EAAE;gBACb,QAAQ,UAAA;gBACR,eAAe,EAAE,EAAE,GAAG,KAAK,CAAC,SAAS;gBACrC,aAAa,EAAE,KAAK,CAAC,cAAc;gBACnC,YAAY,EAAE,KAAK,CAAC,QAAQ;aACxB,CAAC,CAAC;SACb;KACJ;IACD,OAAO,IAAI,CAAC;AAChB,CAAC;AAED,SAAS,aAAa,CAAC,EAAU,EAAE,gBAAwB,EAAE,IAAS,EAAE,MAAW;IAC/E,IAAM,KAAK,GAAG,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;IAClC,KAAgB,UAAmB,EAAnB,KAAA,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,EAAnB,cAAmB,EAAnB,IAAmB;QAA9B,IAAM,CAAC,SAAA;QAAyB,KAAK,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC;KAAA;IACxD,+BAAS,EAAE,IAAA,EAAE,gBAAgB,kBAAA,EAAE,UAAU,EAAE,IAAI,CAAC,UAAU,IAAK,KAAK,EAAG;AAC3E,CAAC;AAED,SAAS,SAAS,CAAC,IAAY,EAAE,MAAW,EAAE,OAAY;IACtD,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC;QAAE,OAAO,KAAK,CAAC,CAAC;IAElC,IAAM,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC;IAE3B,IAAM,OAAO,GAAU,EAAE,CAAC;IAC1B,IAAM,QAAQ,GAAiB,EAAE,CAAC;IAElC,IAAI,eAAe,GAAG,CAAC,EAAE,gBAAgB,GAAG,CAAC,CAAC;IAE9C,KAAiB,UAAiB,EAAjB,KAAA,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,EAAjB,cAAiB,EAAjB,IAAiB,EAAE;QAA/B,IAAM,EAAE,SAAA;QACT,IAAM,MAAM,GAAG,IAAI,CAAC,EAAE,CAAC,CAAC;QACxB,OAAO,CAAC,IAAI,CAAC,aAAa,CAAC,EAAE,EAAE,gBAAgB,EAAE,MAAM,EAAE,MAAM,CAAC,CAAC,CAAC;QAClE,QAAQ,CAAC,IAAI,OAAb,QAAQ,EAAS,WAAW,CAAC,eAAe,EAAE,gBAAgB,EAAE,MAAM,CAAC,QAAQ,CAAC,EAAE;QAClF,eAAe,GAAG,QAAQ,CAAC,MAAM,GAAG,CAAC,CAAC;QACtC,gBAAgB,EAAE,CAAC;KACtB;IAED,OAAO,OAAO,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC;QACxB,IAAI,MAAA;QACJ,OAAO,EAAE,UAAK,CAAC,MAAM,iDAAM,CAAC,CAAC,IAAI,GAAK,MAAM,GAAI,OAAO,CAAC;QACxD,QAAQ,EAAE,UAAK,CAAC,MAAM,CAAY,CAAC,CAAC,OAAO,EAAE,QAAQ,CAAC;KACzD,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;AACf,CAAC"}

package/lib/commonjs/examples/domain-annotation-server/server.js

@@ -14,7 +14,7 @@ function getMappings(id) {
         var data, json;
         return (0, tslib_1.__generator)(this, function (_a) {
             switch (_a.label) {
-                case 0: return [4 /*yield*/, (0, node_fetch_1.default)("https://www.ebi.ac.uk/pdbe/api/mappings/" + id)];
+                case 0: return [4 /*yield*/, (0, node_fetch_1.default)("https://www.ebi.ac.uk/pdbe/api/mappings/".concat(id))];
                 case 1:
                     data = _a.sent();
                     return [4 /*yield*/, data.json()];
@@ -29,7 +29,7 @@ function getMappings(id) {
 var PORT = process.env.port || 1338;
 var app = (0, express_1.default)();
 var PREFIX = '/';
-app.get(PREFIX + "/:id", function (req, res) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
+app.get("".concat(PREFIX, "/:id"), function (req, res) { return (0, tslib_1.__awaiter)(void 0, void 0, void 0, function () {
     var mapping, _a;
     return (0, tslib_1.__generator)(this, function (_b) {
         switch (_b.label) {
@@ -56,7 +56,7 @@ app.get(PREFIX + "/:id", function (req, res) { return (0, tslib_1.__awaiter)(voi
         }
     });
 }); });
-app.get("" + PREFIX, function (req, res) {
+app.get("".concat(PREFIX), function (req, res) {
     res.writeHead(200, { 'Content-Type': 'text/plain; charset=utf-8' });
     res.end('Usage: /pdb_id, e.g. /1tqn');
 });

package/lib/commonjs/examples/domain-annotation-server/server.js.map

@@ -1 +1 @@
-{"version":3,"file":"server.js","sourceRoot":"","sources":["../../../../src/examples/domain-annotation-server/server.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;AAEH,iEAA8B;AAC9B,uEAA+B;AAC/B,qCAA0C;AAE1C,SAAe,WAAW,CAAC,EAAU;;;;;wBACpB,qBAAM,IAAA,oBAAK,EAAC,6CAA2C,EAAI,CAAC,EAAA;;oBAAnE,IAAI,GAAG,SAA4D;oBAC5D,qBAAM,IAAI,CAAC,IAAI,EAAE,EAAA;;oBAAxB,IAAI,GAAG,SAAiB;oBAC9B,sBAAO,IAAA,uBAAa,EAAC,IAAI,CAAC,EAAC;;;;CAC9B;AAAA,CAAC;AAGF,IAAM,IAAI,GAAG,OAAO,CAAC,GAAG,CAAC,IAAI,IAAI,IAAI,CAAC;AAEtC,IAAM,GAAG,GAAG,IAAA,iBAAO,GAAE,CAAC;AAEtB,IAAM,MAAM,GAAG,GAAG,CAAC;AAEnB,GAAG,CAAC,GAAG,CAAI,MAAM,SAAM,EAAE,UAAO,GAAG,EAAE,GAAG;;;;;;gBAEhC,OAAO,CAAC,GAAG,CAAC,aAAa,GAAG,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;gBAC3B,qBAAM,WAAW,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,EAAA;;gBAA1C,OAAO,GAAG,SAAgC;gBAChD,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE;oBACf,cAAc,EAAE,2BAA2B;oBAC3C,6BAA6B,EAAE,GAAG;oBAClC,8BAA8B,EAAE,kBAAkB;iBACrD,CAAC,CAAC;gBACH,GAAG,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;;;;gBAEjB,OAAO,CAAC,GAAG,CAAC,SAAS,GAAG,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;gBACvC,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE,EAAE,6BAA6B,EAAE,GAAG,EAAE,8BAA8B,EAAE,kBAAkB,EAAE,CAAC,CAAC;gBAC/G,GAAG,CAAC,GAAG,EAAE,CAAC;;;;;KAEjB,CAAC,CAAC;AAEH,GAAG,CAAC,GAAG,CAAC,KAAG,MAAQ,EAAE,UAAC,GAAG,EAAE,GAAG;IAC1B,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE,EAAE,cAAc,EAAE,2BAA2B,EAAE,CAAC,CAAC;IACpE,GAAG,CAAC,GAAG,CAAC,4BAA4B,CAAC,CAAC;AAC1C,CAAC,CAAC,CAAC;AAEH,GAAG,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;AAEjB,OAAO,CAAC,GAAG,CAAC,kBAAkB,GAAG,IAAI,CAAC,CAAC"}
+{"version":3,"file":"server.js","sourceRoot":"","sources":["../../../../src/examples/domain-annotation-server/server.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;AAEH,iEAA8B;AAC9B,uEAA+B;AAC/B,qCAA0C;AAE1C,SAAe,WAAW,CAAC,EAAU;;;;;wBACpB,qBAAM,IAAA,oBAAK,EAAC,kDAA2C,EAAE,CAAE,CAAC,EAAA;;oBAAnE,IAAI,GAAG,SAA4D;oBAC5D,qBAAM,IAAI,CAAC,IAAI,EAAE,EAAA;;oBAAxB,IAAI,GAAG,SAAiB;oBAC9B,sBAAO,IAAA,uBAAa,EAAC,IAAI,CAAC,EAAC;;;;CAC9B;AAAA,CAAC;AAGF,IAAM,IAAI,GAAG,OAAO,CAAC,GAAG,CAAC,IAAI,IAAI,IAAI,CAAC;AAEtC,IAAM,GAAG,GAAG,IAAA,iBAAO,GAAE,CAAC;AAEtB,IAAM,MAAM,GAAG,GAAG,CAAC;AAEnB,GAAG,CAAC,GAAG,CAAC,UAAG,MAAM,SAAM,EAAE,UAAO,GAAG,EAAE,GAAG;;;;;;gBAEhC,OAAO,CAAC,GAAG,CAAC,aAAa,GAAG,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;gBAC3B,qBAAM,WAAW,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,EAAA;;gBAA1C,OAAO,GAAG,SAAgC;gBAChD,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE;oBACf,cAAc,EAAE,2BAA2B;oBAC3C,6BAA6B,EAAE,GAAG;oBAClC,8BAA8B,EAAE,kBAAkB;iBACrD,CAAC,CAAC;gBACH,GAAG,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;;;;gBAEjB,OAAO,CAAC,GAAG,CAAC,SAAS,GAAG,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;gBACvC,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE,EAAE,6BAA6B,EAAE,GAAG,EAAE,8BAA8B,EAAE,kBAAkB,EAAE,CAAC,CAAC;gBAC/G,GAAG,CAAC,GAAG,EAAE,CAAC;;;;;KAEjB,CAAC,CAAC;AAEH,GAAG,CAAC,GAAG,CAAC,UAAG,MAAM,CAAE,EAAE,UAAC,GAAG,EAAE,GAAG;IAC1B,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE,EAAE,cAAc,EAAE,2BAA2B,EAAE,CAAC,CAAC;IACpE,GAAG,CAAC,GAAG,CAAC,4BAA4B,CAAC,CAAC;AAC1C,CAAC,CAAC,CAAC;AAEH,GAAG,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;AAEjB,OAAO,CAAC,GAAG,CAAC,kBAAkB,GAAG,IAAI,CAAC,CAAC"}

package/lib/commonjs/examples/proteopedia-wrapper/annotation.js

@@ -39,7 +39,7 @@ exports.EvolutionaryConservation = custom_element_property_1.CustomElementProper
                 switch (_d.label) {
                     case 0:
                         id = model.entryId.toLowerCase();
-                        url = assets_1.Asset.getUrlAsset(ctx.assetManager, "https://proteopedia.org/cgi-bin/cnsrf?" + id);
+                        url = assets_1.Asset.getUrlAsset(ctx.assetManager, "https://proteopedia.org/cgi-bin/cnsrf?".concat(id));
                         return [4 /*yield*/, ctx.assetManager.resolve(url, 'json').runInContext(ctx.runtime)];
                     case 1:
                         json = _d.sent();
@@ -58,7 +58,7 @@ exports.EvolutionaryConservation = custom_element_property_1.CustomElementProper
                         chainIndex = model.atomicHierarchy.chainAtomSegments.index;
                         for (rI = 0; rI < residueCount; rI++) {
                             cI = chainIndex[residueOffsets[rI]];
-                            key = model.atomicHierarchy.chains.auth_asym_id.value(cI) + " " + model.atomicHierarchy.residues.auth_seq_id.value(rI);
+                            key = "".concat(model.atomicHierarchy.chains.auth_asym_id.value(cI), " ").concat(model.atomicHierarchy.residues.auth_seq_id.value(rI));
                             if (!conservationMap.has(key))
                                 continue;
                             ann = conservationMap.get(key);
@@ -82,7 +82,7 @@ exports.EvolutionaryConservation = custom_element_property_1.CustomElementProper
     getLabel: function (e) {
         if (e === 10)
             return "Evolutionary Conservation: Insufficient Data";
-        return e ? "Evolutionary Conservation: " + e : void 0;
+        return e ? "Evolutionary Conservation: ".concat(e) : void 0;
     }
 });
 //# sourceMappingURL=annotation.js.map

package/lib/commonjs/examples/proteopedia-wrapper/annotation.js.map

@@ -1 +1 @@
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+{"version":3,"file":"annotation.js","sourceRoot":"","sources":["../../../../src/examples/proteopedia-wrapper/annotation.ts"],"names":[],"mappings":";AAAA;;;;;GAKG;;;;AAEH,gGAA6F;AAE7F,8CAA6C;AAE7C,gDAA8C;AAE9C,IAAM,+BAA+B,GAAY;IAC7C,CAAC,GAAG,EAAE,GAAG,EAAE,GAAG,CAAC;IACf,CAAC,GAAG,EAAE,EAAE,EAAE,EAAE,CAAC;IACb,CAAC,GAAG,EAAE,GAAG,EAAE,GAAG,CAAC;IACf,CAAC,GAAG,EAAE,GAAG,EAAE,GAAG,CAAC;IACf,CAAC,GAAG,EAAE,GAAG,EAAE,GAAG,CAAC;IACf,CAAC,GAAG,EAAE,GAAG,EAAE,GAAG,CAAC;IACf,CAAC,GAAG,EAAE,GAAG,EAAE,GAAG,CAAC;IACf,CAAC,GAAG,EAAE,GAAG,EAAE,GAAG,CAAC;IACf,CAAC,GAAG,EAAE,GAAG,EAAE,GAAG,CAAC;IACf,CAAC,EAAE,EAAE,GAAG,EAAE,GAAG,CAAC,CAAC,IAAI;CACtB,CAAC,OAAO,EAAE,CAAC,GAAG,CAAC,UAAC,EAAS;QAAR,CAAC,QAAA,EAAE,CAAC,QAAA,EAAE,CAAC,QAAA;IAAM,OAAA,aAAK,CAAC,OAAO,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;AAAtB,CAAsB,CAAC,CAAC;AACvD,IAAM,oCAAoC,GAAG,IAAA,aAAK,EAAC,QAAQ,CAAC,CAAC;AAEhD,QAAA,wBAAwB,GAAG,+CAAqB,CAAC,MAAM,CAAS;IACzE,IAAI,EAAE,+CAA+C;IACrD,KAAK,EAAE,2BAA2B;IAClC,IAAI,EAAE,QAAQ;IACR,OAAO,EAAb,UAAc,KAAY,EAAE,GAA2B;;;;;;;wBAC7C,EAAE,GAAG,KAAK,CAAC,OAAO,CAAC,WAAW,EAAE,CAAC;wBACjC,GAAG,GAAG,cAAK,CAAC,WAAW,CAAC,GAAG,CAAC,YAAY,EAAE,gDAAyC,EAAE,CAAE,CAAC,CAAC;wBAClF,qBAAM,GAAG,CAAC,YAAY,CAAC,OAAO,CAAC,GAAG,EAAE,MAAM,CAAC,CAAC,YAAY,CAAC,GAAG,CAAC,OAAO,CAAC,EAAA;;wBAA5E,IAAI,GAAG,SAAqE;wBAC5E,WAAW,GAAG,CAAA,MAAA,IAAI,CAAC,IAAI,0CAAE,kBAAkB,KAAI,EAAE,CAAC;wBAElD,eAAe,GAAG,IAAI,GAAG,EAAkB,CAAC;wBAElD,WAA2B,EAAX,2BAAW,EAAX,yBAAW,EAAX,IAAW,EAAE;4BAAlB,CAAC;4BACR,WAAqB,EAAL,KAAA,CAAC,CAAC,GAAG,EAAL,cAAK,EAAL,IAAK,EAAE;gCAAZ,CAAC;gCACR,eAAe,CAAC,GAAG,CAAC,CAAC,EAAE,CAAC,CAAC,UAAU,CAAC,CAAC;6BACxC;yBACJ;wBAEK,GAAG,GAAG,IAAI,GAAG,EAAwB,CAAC;wBAEzB,YAAY,GAAK,KAAK,CAAC,eAAe,CAAC,QAAQ,UAAnC,CAAoC;wBAClD,cAAc,GAAK,KAAK,CAAC,eAAe,CAAC,mBAAmB,QAA9C,CAA+C;wBACxE,UAAU,GAAG,KAAK,CAAC,eAAe,CAAC,iBAAiB,CAAC,KAAK,CAAC;wBAEjE,KAAS,EAAE,GAAG,CAAiB,EAAE,EAAE,GAAG,YAAY,EAAE,EAAE,EAAE,EAAE;4BAChD,EAAE,GAAG,UAAU,CAAC,cAAc,CAAC,EAAE,CAAC,CAAC,CAAC;4BACpC,GAAG,GAAG,UAAG,KAAK,CAAC,eAAe,CAAC,MAAM,CAAC,YAAY,CAAC,KAAK,CAAC,EAAE,CAAC,cAAI,KAAK,CAAC,eAAe,CAAC,QAAQ,CAAC,WAAW,CAAC,KAAK,CAAC,EAAE,CAAC,CAAE,CAAC;4BAC7H,IAAI,CAAC,eAAe,CAAC,GAAG,CAAC,GAAG,CAAC;gCAAE,SAAS;4BAClC,GAAG,GAAG,eAAe,CAAC,GAAG,CAAC,GAAG,CAAE,CAAC;4BACtC,KAAS,EAAE,GAAG,cAAc,CAAC,EAAE,CAAC,EAAE,EAAE,GAAG,cAAc,CAAC,EAAE,GAAG,CAAC,CAAC,EAAE,EAAE,EAAE,EAAE;gCACjE,GAAG,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,CAAC,CAAC;6BACpB;yBACJ;wBAED,sBAAO,EAAE,KAAK,EAAE,GAAG,EAAE,MAAM,EAAE,CAAC,IAAI,CAAC,EAAE,EAAC;;;;KACzC;IACD,QAAQ,EAAE;QACN,QAAQ,EAAR,UAAS,CAAS;YACd,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,GAAG,EAAE;gBAAE,OAAO,oCAAoC,CAAC;YACjE,OAAO,+BAA+B,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;QAClD,CAAC;QACD,YAAY,EAAE,oCAAoC;KACrD;IACD,QAAQ,YAAC,CAAC;QACN,IAAI,CAAC,KAAK,EAAE;YAAE,OAAO,8CAA8C,CAAC;QACpE,OAAO,CAAC,CAAC,CAAC,CAAC,qCAA8B,CAAC,CAAE,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;IAC1D,CAAC;CACJ,CAAC,CAAC"}

package/lib/commonjs/examples/proteopedia-wrapper/helpers.js

@@ -22,7 +22,7 @@ var ModelInfo;
                     case 1:
                         _a.trys.push([1, 3, , 4]);
                         id = model.entryId.toLowerCase();
-                        return [4 /*yield*/, ctx.runTask(ctx.fetch({ url: "https://www.ebi.ac.uk/pdbe/api/pdb/entry/summary/" + id }))];
+                        return [4 /*yield*/, ctx.runTask(ctx.fetch({ url: "https://www.ebi.ac.uk/pdbe/api/pdb/entry/summary/".concat(id) }))];
                     case 2:
                         src = _a.sent();
                         json = JSON.parse(src);

package/lib/commonjs/examples/proteopedia-wrapper/helpers.js.map

@@ -1 +1 @@
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+{"version":3,"file":"helpers.js","sourceRoot":"","sources":["../../../../src/examples/proteopedia-wrapper/helpers.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;;AAEH,gFAAoF;AAYpF,IAAiB,SAAS,CA8DzB;AA9DD,WAAiB,SAAS;IACtB,SAAe,oBAAoB,CAAC,GAAkB,EAAE,KAAY;;;;;;wBAChE,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,IAAI,CAAC;4BAAE,sBAAO,KAAK,CAAC,EAAC;;;;wBAEnC,EAAE,GAAG,KAAK,CAAC,OAAO,CAAC,WAAW,EAAE,CAAC;wBAC3B,qBAAM,GAAG,CAAC,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE,GAAG,EAAE,2DAAoD,EAAE,CAAE,EAAE,CAAC,CAAC,EAAA;;wBAArG,GAAG,GAAG,SAAyG;wBAC/G,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC;wBACvB,IAAI,GAAG,IAAI,IAAI,IAAI,CAAC,EAAE,CAAC,CAAC;wBAExB,UAAU,GAAG,IAAI,CAAC,CAAC,CAAC,IAAI,IAAI,CAAC,CAAC,CAAC,CAAC,UAAU,CAAC;wBACjD,IAAI,CAAC,UAAU,IAAI,CAAC,UAAU,CAAC,MAAM;4BAAE,sBAAO,KAAK,CAAC,EAAC;wBAErD,WAA4B,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;4BAAnB,GAAG;4BACV,IAAI,GAAG,CAAC,SAAS,EAAE;gCACf,sBAAO,GAAG,CAAC,WAAW,EAAC;6BAC1B;yBACJ;wBACD,sBAAO,KAAK,CAAC,EAAC;;;wBAEd,OAAO,CAAC,IAAI,CAAC,sBAAsB,EAAE,GAAC,CAAC,CAAC;;;;;;KAE/C;IAED,SAAsB,GAAG,CAAC,GAAkB,EAAE,KAAY,EAAE,cAAuB;;;;;;wBAC5D,YAAY,GAAK,KAAK,CAAC,eAAe,CAAC,QAAQ,UAAnC,CAAoC;wBAClD,cAAc,GAAK,KAAK,CAAC,eAAe,CAAC,mBAAmB,QAA9C,CAA+C;wBACxE,UAAU,GAAG,KAAK,CAAC,eAAe,CAAC,iBAAiB,CAAC,KAAK,CAAC;wBAG3D,IAAI,GAAG,cAAc;4BACvB,CAAC,CAAC,oBAAoB,CAAC,GAAG,EAAE,KAAK,CAAC;4BAClC,CAAC,CAAC,KAAK,CAAC,CAAC;wBAEP,WAAW,GAA6B,EAAE,CAAC;wBAC3C,MAAM,GAAG,IAAI,GAAG,EAAuC,CAAC;wBAE9D,KAAS,EAAE,GAAG,CAAiB,EAAE,EAAE,GAAG,YAAY,EAAE,EAAE,EAAE,EAAE;4BAChD,EAAE,GAAG,UAAU,CAAC,cAAc,CAAC,EAAE,CAAC,CAAC,CAAC;4BACpC,EAAE,GAAG,KAAK,CAAC,eAAe,CAAC,KAAK,CAAC,kBAAkB,CAAC,EAAE,CAAC,CAAC;4BACxD,UAAU,GAAG,KAAK,CAAC,QAAQ,CAAC,IAAI,CAAC,IAAI,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;4BACtD,IAAI,UAAU,KAAK,aAAa,IAAI,UAAU,KAAK,UAAU;gCAAE,SAAS;4BAElE,OAAO,GAAG,KAAK,CAAC,eAAe,CAAC,KAAK,CAAC,aAAa,CAAC,KAAK,CAAC,cAAc,CAAC,EAAE,CAAC,CAAC,CAAC;4BAEhF,GAAG,GAAG,MAAM,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;4BAC9B,IAAI,CAAC,GAAG,EAAE;gCACN,GAAG,GAAG,EAAE,IAAI,EAAE,OAAO,EAAE,OAAO,EAAE,EAAE,EAAE,CAAC;gCACrC,WAAW,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;gCACtB,MAAM,CAAC,GAAG,CAAC,OAAO,EAAE,GAAG,CAAC,CAAC;6BAC5B;4BACD,GAAG,CAAC,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;yBACxB;wBAE2B,qBAAM,IAAI,EAAA;;wBAAhC,mBAAmB,GAAG,SAAU;wBAChC,QAAQ,GAAG,wBAAa,CAAC,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;wBAEnD,sBAAO;gCACH,WAAW,EAAE,WAAW;gCACxB,UAAU,EAAE,QAAQ,CAAC,CAAC,CAAC,QAAQ,CAAC,UAAU,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC,EAAE,EAAE,OAAO,EAAE,CAAC,CAAC,OAAO,EAAE,WAAW,EAAE,CAAC,CAAC,EAAE,KAAK,mBAAmB,EAAE,CAAC,EAA7E,CAA6E,CAAC,CAAC,CAAC,CAAC,EAAE;gCACvI,mBAAmB,qBAAA;6BACtB,EAAC;;;;KACL;IAtCqB,aAAG,MAsCxB,CAAA;AACL,CAAC,EA9DgB,SAAS,GAAT,iBAAS,KAAT,iBAAS,QA8DzB;AAsBD,IAAY,aAiBX;AAjBD,WAAY,aAAa;IACrB,gCAAe,CAAA;IACf,2CAA0B,CAAA;IAC1B,sCAAqB,CAAA;IAErB,qDAAoC,CAAA;IAEpC,sCAAqB,CAAA;IACrB,mDAAkC,CAAA;IAClC,4BAAW,CAAA;IACX,yCAAwB,CAAA;IACxB,yCAAwB,CAAA;IACxB,gCAAe,CAAA;IACf,6CAA4B,CAAA;IAE5B,kDAAiC,CAAA;IACjC,6DAA4C,CAAA;AAChD,CAAC,EAjBW,aAAa,GAAb,qBAAa,KAAb,qBAAa,QAiBxB"}

package/lib/commonjs/examples/proteopedia-wrapper/index.js

@@ -203,7 +203,7 @@ var MolStarProteopediaWrapper = /** @class */ (function () {
                             case 0: return [4 /*yield*/, this.plugin.managers.snapshot.serialize({ type: type, params: params })];
                             case 1:
                                 data = _a.sent();
-                                (0, download_1.download)(data, "mol-star_state_" + (0, date_1.getFormattedTime)() + "." + type);
+                                (0, download_1.download)(data, "mol-star_state_".concat((0, date_1.getFormattedTime)(), ".").concat(type));
                                 return [2 /*return*/];
                         }
                     });
@@ -221,7 +221,7 @@ var MolStarProteopediaWrapper = /** @class */ (function () {
                             case 1:
                                 data = _a.sent();
                                 this.loadedParams = (0, tslib_1.__assign)({}, this.emptyLoadedParams);
-                                return [4 /*yield*/, this.plugin.managers.snapshot.open(new File([data], "state." + type))];
+                                return [4 /*yield*/, this.plugin.managers.snapshot.open(new File([data], "state.".concat(type)))];
                             case 2: return [2 /*return*/, _a.sent()];
                             case 3:
                                 e_1 = _a.sent();