npm - molstar - Versions diffs - 2.3.7 → 2.3.8 - Mend

molstar 2.3.7 → 2.3.8

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (1415) hide show

package/lib/mol-plugin/behavior/dynamic/custom-props/computed/interactions.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/lib/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.js CHANGED Viewed

@@ -51,7 +51,7 @@ export var ValenceModel = PluginBehavior.create({
                                 var idealGeometry = vm.idealGeometry[idx];
                                 var implicitH = vm.implicitH[idx];
                                 var totalH = vm.totalH[idx];
-                                labels.push("Valence Model: <small>Charge</small> " + charge + " | <small>Ideal Geometry</small> " + geometryLabel(idealGeometry) + " | <small>Implicit H</small> " + implicitH + " | <small>Total H</small> " + totalH);
+                                labels.push("Valence Model: <small>Charge</small> ".concat(charge, " | <small>Ideal Geometry</small> ").concat(geometryLabel(idealGeometry), " | <small>Implicit H</small> ").concat(implicitH, " | <small>Total H</small> ").concat(totalH));
                             }
                             return labels.length ? labels.join('<br/>') : undefined;
                         default: return void 0;

package/lib/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"valence-model.js","sourceRoot":"","sources":["../../../../../../src/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,0CAA0C,CAAC;AACjF,OAAO,EAAE,oBAAoB,EAAE,MAAM,uDAAuD,CAAC;AAE7F,OAAO,EAAE,iBAAiB,EAAE,MAAM,yCAAyC,CAAC;AAC5E,OAAO,EAAE,cAAc,EAAE,MAAM,0BAA0B,CAAC;AAC1D,OAAO,EAAa,gBAAgB,EAAE,MAAM,oCAAoC,CAAC;AACjF,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,aAAa,EAAE,MAAM,4DAA4D,CAAC;AAC3F,OAAO,EAAE,WAAW,EAAE,MAAM,+BAA+B,CAAC;AAE5D,MAAM,CAAC,IAAM,YAAY,GAAG,cAAc,CAAC,MAAM,CAAgD;IAC7F,IAAI,EAAE,6BAA6B;IACnC,QAAQ,EAAE,cAAc;IACxB,OAAO,EAAE,EAAE,IAAI,EAAE,eAAe,EAAE;IAClC,IAAI;QAAgB,2BAAqE;QAAnF;YAAA,qEA4EL;YA3EW,cAAQ,GAAG,oBAAoB,CAAA;YAe/B,mBAAa,GAAG;gBACpB,KAAK,EAAE,UAAC,IAAU;oBACd,IAAI,CAAC,KAAI,CAAC,MAAM,CAAC,WAAW;wBAAE,OAAO,KAAK,CAAC,CAAC;oBAE5C,QAAQ,IAAI,CAAC,IAAI,EAAE;wBACf,KAAK,cAAc;4BACf,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;gCAAE,OAAO,KAAK,CAAC,CAAC;4BAE9C,IAAM,MAAM,GAAa,EAAE,CAAC;4BAC5B,IAAM,UAAU,GAAG,KAAI,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;4BAEtD,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;gCAAvB,IAAM,CAAC,mBAAA;gCACR,IAAM,YAAY,GAAG,KAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;gCAChD,IAAI,CAAC,YAAY;oCAAE,SAAS;gCAE5B,IAAM,CAAC,GAAG,gBAAgB,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC;gCAC/C,IAAI,CAAC,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;oCAAE,SAAS;gCAEtC,IAAM,CAAC,GAAG,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;gCACxB,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC;oCAAE,SAAS;gCAE/C,IAAM,EAAE,GAAG,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;gCACvC,IAAI,CAAC,EAAE;oCAAE,SAAS;gCAElB,IAAM,GAAG,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;gCACxC,IAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;gCAC9B,IAAM,aAAa,GAAG,EAAE,CAAC,aAAa,CAAC,GAAG,CAAC,CAAC;gCAC5C,IAAM,SAAS,GAAG,EAAE,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC;gCACpC,IAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;gCAE9B,MAAM,CAAC,IAAI,CAAC,~~0CAAwC,~~MAAM,~~yCAAoC~~,aAAa,CAAC,aAAa,CAAC,~~qCAAgC~~,SAAS,~~kCAA6B~~,~~MAAQ~~,CAAC,CAAC;6BAC7M;4BAED,OAAO,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC;wBAE5D,OAAO,CAAC,CAAC,OAAO,KAAK,CAAC,CAAC;qBAC1B;gBACL,CAAC;aACJ,CAAA;;QAsBL,CAAC;QAzEW,+BAAa,GAArB,UAAsB,SAAoB;YACtC,IAAM,UAAU,GAAgB,EAAE,CAAC;YACnC,IAAM,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,OAAO,CAAC,kBAAkB,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC;YAChE,IAAI,IAAI,EAAE;gBACN,IAAM,KAAK,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,IAAI,CAAC;gBAClC,IAAM,UAAU,GAAG,KAAK,CAAC,MAAM,CAAC,cAAc,CAAC,UAAU,CAAC,MAAM,CAAC,iBAAiB,CAAC,QAAQ,CAAC,SAAS,EAAE,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC,CAAC;gBAC5H,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;oBAAvB,IAAM,CAAC,mBAAA;oBACR,IAAI,CAAC,CAAC,GAAG;wBAAE,WAAW,CAAC,UAAU,EAAE,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;iBAClD;aACJ;YACD,OAAO,UAAU,CAAC;QACtB,CAAC;QA0CD,wBAAM,GAAN,UAAO,CAAgD;YACnD,IAAM,OAAO,GAAG,CACZ,IAAI,CAAC,MAAM,CAAC,UAAU,KAAK,CAAC,CAAC,UAAU;gBACvC,IAAI,CAAC,MAAM,CAAC,WAAW,KAAK,CAAC,CAAC,WAAW,CAC5C,CAAC;YACF,IAAI,CAAC,MAAM,CAAC,UAAU,GAAG,CAAC,CAAC,UAAU,CAAC;YACtC,IAAI,CAAC,MAAM,CAAC,WAAW,GAAG,CAAC,CAAC,WAAW,CAAC;YACxC,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,oBAAoB,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YAC/G,OAAO,OAAO,CAAC;QACnB,CAAC;QAED,0BAAQ,GAAR;YACI,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,QAAQ,CAAC,IAAI,CAAC,QAAQ,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YACnF,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,WAAW,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;QACjE,CAAC;QAED,4BAAU,GAAV;YACI,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC;YAC7E,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,cAAc,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;QACpE,CAAC;QACL,cAAC;IAAD,CAAC,AA5EK,CAAc,cAAc,CAAC,OAAO,EA4EzC;IACD,MAAM,EAAE,cAAM,OAAA,CAAC;QACX,UAAU,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;QAC7B,WAAW,EAAE,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;KAChC,CAAC,EAHY,CAGZ;CACL,CAAC,CAAC"}
1	+ {"version":3,"file":"valence-model.js","sourceRoot":"","sources":["../../../../../../src/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,0CAA0C,CAAC;AACjF,OAAO,EAAE,oBAAoB,EAAE,MAAM,uDAAuD,CAAC;AAE7F,OAAO,EAAE,iBAAiB,EAAE,MAAM,yCAAyC,CAAC;AAC5E,OAAO,EAAE,cAAc,EAAE,MAAM,0BAA0B,CAAC;AAC1D,OAAO,EAAa,gBAAgB,EAAE,MAAM,oCAAoC,CAAC;AACjF,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,aAAa,EAAE,MAAM,4DAA4D,CAAC;AAC3F,OAAO,EAAE,WAAW,EAAE,MAAM,+BAA+B,CAAC;AAE5D,MAAM,CAAC,IAAM,YAAY,GAAG,cAAc,CAAC,MAAM,CAAgD;IAC7F,IAAI,EAAE,6BAA6B;IACnC,QAAQ,EAAE,cAAc;IACxB,OAAO,EAAE,EAAE,IAAI,EAAE,eAAe,EAAE;IAClC,IAAI;QAAgB,2BAAqE;QAAnF;YAAA,qEA4EL;YA3EW,cAAQ,GAAG,oBAAoB,CAAA;YAe/B,mBAAa,GAAG;gBACpB,KAAK,EAAE,UAAC,IAAU;oBACd,IAAI,CAAC,KAAI,CAAC,MAAM,CAAC,WAAW;wBAAE,OAAO,KAAK,CAAC,CAAC;oBAE5C,QAAQ,IAAI,CAAC,IAAI,EAAE;wBACf,KAAK,cAAc;4BACf,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;gCAAE,OAAO,KAAK,CAAC,CAAC;4BAE9C,IAAM,MAAM,GAAa,EAAE,CAAC;4BAC5B,IAAM,UAAU,GAAG,KAAI,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;4BAEtD,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;gCAAvB,IAAM,CAAC,mBAAA;gCACR,IAAM,YAAY,GAAG,KAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;gCAChD,IAAI,CAAC,YAAY;oCAAE,SAAS;gCAE5B,IAAM,CAAC,GAAG,gBAAgB,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC;gCAC/C,IAAI,CAAC,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;oCAAE,SAAS;gCAEtC,IAAM,CAAC,GAAG,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;gCACxB,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC;oCAAE,SAAS;gCAE/C,IAAM,EAAE,GAAG,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;gCACvC,IAAI,CAAC,EAAE;oCAAE,SAAS;gCAElB,IAAM,GAAG,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;gCACxC,IAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;gCAC9B,IAAM,aAAa,GAAG,EAAE,CAAC,aAAa,CAAC,GAAG,CAAC,CAAC;gCAC5C,IAAM,SAAS,GAAG,EAAE,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC;gCACpC,IAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;gCAE9B,MAAM,CAAC,IAAI,CAAC,+CAAwC,MAAM,8CAAoC,aAAa,CAAC,aAAa,CAAC,0CAAgC,SAAS,uCAA6B,MAAM,CAAE,CAAC,CAAC;6BAC7M;4BAED,OAAO,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC;wBAE5D,OAAO,CAAC,CAAC,OAAO,KAAK,CAAC,CAAC;qBAC1B;gBACL,CAAC;aACJ,CAAA;;QAsBL,CAAC;QAzEW,+BAAa,GAArB,UAAsB,SAAoB;YACtC,IAAM,UAAU,GAAgB,EAAE,CAAC;YACnC,IAAM,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,OAAO,CAAC,kBAAkB,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC;YAChE,IAAI,IAAI,EAAE;gBACN,IAAM,KAAK,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,IAAI,CAAC;gBAClC,IAAM,UAAU,GAAG,KAAK,CAAC,MAAM,CAAC,cAAc,CAAC,UAAU,CAAC,MAAM,CAAC,iBAAiB,CAAC,QAAQ,CAAC,SAAS,EAAE,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC,CAAC;gBAC5H,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;oBAAvB,IAAM,CAAC,mBAAA;oBACR,IAAI,CAAC,CAAC,GAAG;wBAAE,WAAW,CAAC,UAAU,EAAE,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;iBAClD;aACJ;YACD,OAAO,UAAU,CAAC;QACtB,CAAC;QA0CD,wBAAM,GAAN,UAAO,CAAgD;YACnD,IAAM,OAAO,GAAG,CACZ,IAAI,CAAC,MAAM,CAAC,UAAU,KAAK,CAAC,CAAC,UAAU;gBACvC,IAAI,CAAC,MAAM,CAAC,WAAW,KAAK,CAAC,CAAC,WAAW,CAC5C,CAAC;YACF,IAAI,CAAC,MAAM,CAAC,UAAU,GAAG,CAAC,CAAC,UAAU,CAAC;YACtC,IAAI,CAAC,MAAM,CAAC,WAAW,GAAG,CAAC,CAAC,WAAW,CAAC;YACxC,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,oBAAoB,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YAC/G,OAAO,OAAO,CAAC;QACnB,CAAC;QAED,0BAAQ,GAAR;YACI,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,QAAQ,CAAC,IAAI,CAAC,QAAQ,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YACnF,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,WAAW,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;QACjE,CAAC;QAED,4BAAU,GAAV;YACI,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC;YAC7E,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,cAAc,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;QACpE,CAAC;QACL,cAAC;IAAD,CAAC,AA5EK,CAAc,cAAc,CAAC,OAAO,EA4EzC;IACD,MAAM,EAAE,cAAM,OAAA,CAAC;QACX,UAAU,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;QAC7B,WAAW,EAAE,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;KAChC,CAAC,EAHY,CAGZ;CACL,CAAC,CAAC"}

package/lib/mol-plugin/behavior/dynamic/representation.d.ts CHANGED Viewed

@@ -12,7 +12,7 @@ export declare const HighlightLoci: import("../../../mol-state/transformer").Sta
         hoverHighlightOnly: Binding;
         hoverHighlightOnlyExtend: Binding;
     }>;
-    ignore: PD.Value<("every-loci" | "empty-loci" | "volume-loci" | "isosurface-loci" | "cell-loci" | "element-loci" | "structure-loci" | "bond-loci" | "data-loci" | "shape-loci" | "group-loci")[]>;
+    ignore: PD.Value<("element-loci" | "structure-loci" | "bond-loci" | "volume-loci" | "isosurface-loci" | "cell-loci" | "shape-loci" | "group-loci" | "every-loci" | "empty-loci" | "data-loci")[]>;
     preferAtoms: PD.BooleanParam;
     mark: PD.BooleanParam;
 }>>;
@@ -25,7 +25,7 @@ export declare const SelectLoci: import("../../../mol-state/transformer").StateT
         clickDeselect: Binding;
         clickDeselectAllOnEmpty: Binding;
     }>;
-    ignore: PD.Value<("every-loci" | "empty-loci" | "volume-loci" | "isosurface-loci" | "cell-loci" | "element-loci" | "structure-loci" | "bond-loci" | "data-loci" | "shape-loci" | "group-loci")[]>;
+    ignore: PD.Value<("element-loci" | "structure-loci" | "bond-loci" | "volume-loci" | "isosurface-loci" | "cell-loci" | "shape-loci" | "group-loci" | "every-loci" | "empty-loci" | "data-loci")[]>;
     preferAtoms: PD.BooleanParam;
     mark: PD.BooleanParam;
 }>>;

package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts CHANGED Viewed

@@ -18,7 +18,7 @@ declare const StructureFocusRepresentationParams: (plugin: PluginContext) => {
     nciParams: PD.Group<PD.Normalize<{
         [x: string]: any;
     }>>;
-    components: PD.MultiSelect<"target" | "interactions" | "surroundings">;
+    components: PD.MultiSelect<"target" | "surroundings" | "interactions">;
     excludeTargetFromSurroundings: PD.BooleanParam;
     ignoreHydrogens: PD.BooleanParam;
 };

package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js CHANGED Viewed

@@ -59,7 +59,7 @@ var StructureFocusRepresentationBehavior = /** @class */ (function (_super) {
         return _this;
     }
     Object.defineProperty(StructureFocusRepresentationBehavior.prototype, "surrLabel", {
-        get: function () { return "[Focus] Surroundings (" + this.params.expandRadius + " \u00C5)"; },
+        get: function () { return "[Focus] Surroundings (".concat(this.params.expandRadius, " \u00C5)"); },
         enumerable: false,
         configurable: true
     });

package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ {"version":3,"file":"structure-focus-representation.js","sourceRoot":"","sources":["../../../../../src/mol-plugin/behavior/dynamic/selection/structure-focus-representation.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;;AAEH,OAAO,EAAE,kCAAkC,EAAE,MAAM,mEAAmE,CAAC;AACvH,OAAO,EAAE,iCAAiC,EAAE,MAAM,8DAA8D,CAAC;AACjH,OAAO,EAAE,gBAAgB,EAAE,MAAM,iCAAiC,CAAC;AACnE,OAAO,EAAE,mCAAmC,EAAE,MAAM,sEAAsE,CAAC;AAE3H,OAAO,EAAE,eAAe,EAAE,MAAM,yCAAyC,CAAC;AAC1E,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,gBAAgB,IAAI,EAAE,EAAE,MAAM,yCAAyC,CAAC;AACjF,OAAO,EAAmB,cAAc,EAAE,cAAc,EAAE,MAAM,uBAAuB,CAAC;AACxF,OAAO,EAAE,SAAS,EAAE,MAAM,4BAA4B,CAAC;AACvD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,uCAAuC,CAAC;AAC9E,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AAGnD,IAAM,kCAAkC,GAAG,UAAC,MAAqB;IAC7D,IAAM,UAAU,GAAG,eAAe,CAAC,cAAc,CAAC,yBAAyB,CAAC,UAAU,CAAC,MAAO,CAAC,KAAK,CAAC,EAAE,MAAM,CAAc,CAAC;IAC5H,OAAO;QACH,YAAY,EAAE,EAAE,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,CAAC,EAAE,GAAG,EAAE,EAAE,EAAE,IAAI,EAAE,CAAC,EAAE,CAAC;QACzD,YAAY,EAAE,EAAE,CAAC,KAAK,CAAC,UAAU,EAAE;YAC/B,KAAK,EAAE,QAAQ;YACf,aAAa,EAAE,mCAAmC,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,EAAE,IAAI,EAAE,gBAAgB,EAAE,IAAI,EAAE,UAAU,EAAE,UAAU,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,KAAK,EAAE,IAAI,EAAE,oBAAoB,EAAE,IAAI,EAAE,EAAE,CAAC;SAC9L,CAAC;QACF,kBAAkB,EAAE,EAAE,CAAC,KAAK,CAAC,UAAU,EAAE;YACrC,KAAK,EAAE,cAAc;YACrB,aAAa,EAAE,mCAAmC,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,EAAE,IAAI,EAAE,gBAAgB,EAAE,IAAI,EAAE,UAAU,EAAE,UAAU,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,EAAE,CAAC;SACrJ,CAAC;QACF,SAAS,EAAE,EAAE,CAAC,KAAK,CAAC,UAAU,EAAE;YAC5B,KAAK,EAAE,mBAAmB;YAC1B,aAAa,EAAE,mCAAmC,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE;gBAC/D,IAAI,EAAE,kCAAkC;gBACxC,KAAK,EAAE,iCAAiC;gBACxC,IAAI,EAAE,SAAS,CAAC,OAAO,CAAC,OAAO;aAClC,CAAC;SACL,CAAC;QACF,UAAU,EAAE,EAAE,CAAC,WAAW,CAAC,eAAe,EAAE,EAAE,CAAC,cAAc,CAAC,eAAe,CAAC,CAAC;QAC/E,6BAA6B,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,EAAE,EAAE,KAAK,EAAE,gBAAgB,EAAE,WAAW,EAAE,4DAA4D,EAAE,CAAC;QACxJ,eAAe,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;KACrC,CAAC;AACN,CAAC,CAAC;AAEF,IAAM,eAAe,GAAG,CAAC,QAAiB,EAAE,cAAuB,EAAE,cAAuB,CAAC,CAAC;AAI9F,MAAM,CAAN,IAAY,gCAMX;AAND,WAAY,gCAAgC;IACxC,4EAAwC,CAAA;IACxC,8EAA0C,CAAA;IAC1C,wEAAoC,CAAA;IACpC,0EAAsC,CAAA;IACtC,iFAA6C,CAAA;AACjD,CAAC,EANW,gCAAgC,KAAhC,gCAAgC,QAM3C;AAED,IAAM,MAAM,GAA0C,IAAI,GAAG,CAAC,CAAC,gCAAgC,CAAC,SAAS,EAAE,gCAAgC,CAAC,UAAU,EAAE,gCAAgC,CAAC,OAAO,EAAE,gCAAgC,CAAC,QAAQ,EAAE,gCAAgC,CAAC,WAAW,CAAC,CAAC,CAAC;AAE5R;IAAmD,wDAAiE;IAApH;QAAA,qEAuKC;QAxFW,mBAAa,GAAsC,KAAK,CAAC,CAAC;;IAwFtE,CAAC;IAtKG,sBAAY,2DAAS;aAArB,cAA0B,OAAO,gCAAyB,IAAI,CAAC,MAAM,CAAC,YAAY,aAAK,CAAC,CAAC,CAAC;;;OAAA;IAElF,4DAAa,GAArB,UAAsB,UAAgC;QAClD,6BACO,IAAI,CAAC,MAAM,CAAC,YAAY,KAC3B,IAAI,EAAE;gBACF,IAAI,EAAE,UAAU,CAAC,IAAI,CAAC,IAAI;gBAC1B,MAAM,wBAAO,UAAU,CAAC,IAAI,CAAC,MAAM,KAAE,eAAe,EAAE,IAAI,CAAC,MAAM,CAAC,eAAe,GAAE;aACtF,IACH;IACN,CAAC;IAEO,0DAAW,GAAnB,UAAoB,IAA2D;;QAC3E,IAAM,KAAK,GAAG,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC,IAAI,EAAE,IAAI,GAAG,KAAK,CAAC,IAAI,CAAC;QACxD,IAAM,OAAO,GAAG,KAAK,CAAC,KAAK,EAAE,CAAC;QAC9B,IAAM,IAAI,GAAG,cAAc,CAAC,uBAAuB,CAAC,IAAI,EAAE,IAAI,CAAC,SAAS,CAAC,GAAG,EAAE,MAAM,CAAC,CAAC;QAEtF,aAAa;QACb,IAAI,CAAC,IAAI,CAAC,gCAAgC,CAAC,SAAS,CAAC,EAAE;YACnD,IAAI,CAAC,gCAAgC,CAAC,SAAS,CAAC,GAAG,OAAO;iBACrD,EAAE,CAAC,IAAI,CAAC;iBACR,KAAK,CAAC,eAAe,CAAC,KAAK,CAAC,4BAA4B,EACrD,EAAE,MAAM,EAAE,gBAAgB,CAAC,MAAM,CAAC,KAAK,EAAE,KAAK,EAAE,gBAAgB,EAAE,EAAE,EAAE,IAAI,EAAE,gCAAgC,CAAC,SAAS,EAAE,CAAC,CAAC,GAAG,CAAC;SACzI;QAED,IAAI,CAAC,IAAI,CAAC,gCAAgC,CAAC,OAAO,CAAC,EAAE;YACjD,IAAI,CAAC,gCAAgC,CAAC,OAAO,CAAC,GAAG,OAAO;iBACnD,EAAE,CAAC,IAAI,CAAC;iBACR,KAAK,CAAC,eAAe,CAAC,KAAK,CAAC,gCAAgC,EACzD,EAAE,UAAU,EAAE,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,KAAK,EAAE,EAAE,KAAK,EAAE,IAAI,CAAC,SAAS,EAAE,EAAE,EAAE,IAAI,EAAE,gCAAgC,CAAC,OAAO,EAAE,CAAC,CAAC,GAAG,CAAC;SACvI;QAED,IAAM,UAAU,GAAG,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC;QAE1C,kBAAkB;QAClB,IAAI,UAAU,CAAC,OAAO,CAAC,QAAQ,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,gCAAgC,CAAC,UAAU,CAAC,EAAE;YACzF,IAAI,CAAC,gCAAgC,CAAC,UAAU,CAAC,GAAG,OAAO;iBACtD,EAAE,CAAC,IAAI,CAAC,gCAAgC,CAAC,SAAS,CAAE,CAAC;iBACrD,KAAK,CAAC,eAAe,CAAC,cAAc,CAAC,yBAAyB,EAAE,IAAI,CAAC,aAAa,CAAC,IAAI,CAAC,MAAM,CAAC,YAAY,CAAC,EAAE,EAAE,IAAI,EAAE,gCAAgC,CAAC,UAAU,EAAE,CAAC,CAAC,GAAG,CAAC;SACjL;QAED,IAAI,UAAU,CAAC,OAAO,CAAC,cAAc,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,gCAAgC,CAAC,QAAQ,CAAC,EAAE;YAC7F,IAAI,CAAC,gCAAgC,CAAC,QAAQ,CAAC,GAAG,OAAO;iBACpD,EAAE,CAAC,IAAI,CAAC,gCAAgC,CAAC,OAAO,CAAE,CAAC;iBACnD,KAAK,CAAC,eAAe,CAAC,cAAc,CAAC,yBAAyB,EAAE,IAAI,CAAC,aAAa,CAAC,IAAI,CAAC,MAAM,CAAC,kBAAkB,CAAC,EAAE,EAAE,IAAI,EAAE,gCAAgC,CAAC,QAAQ,EAAE,CAAC,CAAC,GAAG,CAAC;SACrL;QAED,IAAI,UAAU,CAAC,OAAO,CAAC,cAAc,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,gCAAgC,CAAC,WAAW,CAAC,IAAI,IAAI,CAAC,GAAG,IAAI,kCAAkC,CAAC,YAAY,CAAC,MAAA,IAAI,CAAC,GAAG,0CAAE,IAAI,CAAC,EAAE;YAC/K,IAAI,CAAC,gCAAgC,CAAC,WAAW,CAAC,GAAG,OAAO;iBACvD,EAAE,CAAC,IAAI,CAAC,gCAAgC,CAAC,OAAO,CAAE,CAAC;iBACnD,KAAK,CAAC,eAAe,CAAC,cAAc,CAAC,yBAAyB,EAAE,IAAI,CAAC,MAAM,CAAC,SAAS,EAAE,EAAE,IAAI,EAAE,gCAAgC,CAAC,WAAW,EAAE,CAAC,CAAC,GAAG,CAAC;SAC3J;QAED,OAAO,EAAE,KAAK,OAAA,EAAE,OAAO,SAAA,EAAE,IAAI,MAAA,EAAE,CAAC;IACpC,CAAC;IAEO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package/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts CHANGED Viewed

@@ -49,16 +49,16 @@ export declare namespace VolumeStreaming {
         channelParams?: DefaultChannelParams;
     }): {
         entry: PD.Mapped<PD.NamedParams<PD.Values<{
-            view: PD.Mapped<PD.NamedParams<PD.Normalize<{}>, "cell"> | PD.NamedParams<PD.Normalize<{
+            view: PD.Mapped<PD.NamedParams<PD.Normalize<{
+                bottomLeft: Vec3;
+                topRight: Vec3;
+            }>, "box"> | PD.NamedParams<PD.Normalize<{
                 radius: number;
                 selectionDetailLevel: number;
                 isSelection: boolean;
                 bottomLeft: Vec3;
                 topRight: Vec3;
-            }>, "auto"> | PD.NamedParams<PD.Normalize<{}>, "off"> | PD.NamedParams<PD.Normalize<{
-                bottomLeft: Vec3;
-                topRight: Vec3;
-            }>, "box"> | PD.NamedParams<PD.Normalize<{
+            }>, "auto"> | PD.NamedParams<PD.Normalize<{}>, "off"> | PD.NamedParams<PD.Normalize<{}>, "cell"> | PD.NamedParams<PD.Normalize<{
                 radius: number;
                 bottomLeft: Vec3;
                 topRight: Vec3;
@@ -81,16 +81,16 @@ export declare namespace VolumeStreaming {
         structure?: Structure;
         channelParams?: DefaultChannelParams;
     }): {
-        view: PD.Mapped<PD.NamedParams<PD.Normalize<{}>, "cell"> | PD.NamedParams<PD.Normalize<{
+        view: PD.Mapped<PD.NamedParams<PD.Normalize<{
+            bottomLeft: Vec3;
+            topRight: Vec3;
+        }>, "box"> | PD.NamedParams<PD.Normalize<{
             radius: number;
             selectionDetailLevel: number;
             isSelection: boolean;
             bottomLeft: Vec3;
             topRight: Vec3;
-        }>, "auto"> | PD.NamedParams<PD.Normalize<{}>, "off"> | PD.NamedParams<PD.Normalize<{
-            bottomLeft: Vec3;
-            topRight: Vec3;
-        }>, "box"> | PD.NamedParams<PD.Normalize<{
+        }>, "auto"> | PD.NamedParams<PD.Normalize<{}>, "off"> | PD.NamedParams<PD.Normalize<{}>, "cell"> | PD.NamedParams<PD.Normalize<{
             radius: number;
             bottomLeft: Vec3;
             topRight: Vec3;

package/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.js CHANGED Viewed

@@ -82,13 +82,13 @@ export { VolumeStreaming };
                 // Show selection-box if available and cell otherwise.
                 'auto': PD.Group({
                     radius: PD.Numeric(5, { min: 0, max: 50, step: 0.5 }, { description: 'Radius in \u212B within which the volume is shown.' }),
-                    selectionDetailLevel: PD.Select(Math.min(6, info.header.availablePrecisions.length - 1), info.header.availablePrecisions.map(function (p, i) { return [i, i + 1 + " [ " + (Math.pow(p.maxVoxels, 1 / 3) | 0) + "^3 cells ]"]; }), { label: 'Selection Detail', description: 'Determines the maximum number of voxels. Depending on the size of the volume options are in the range from 0 (0.52M voxels) to 6 (25.17M voxels).' }),
+                    selectionDetailLevel: PD.Select(Math.min(6, info.header.availablePrecisions.length - 1), info.header.availablePrecisions.map(function (p, i) { return [i, "".concat(i + 1, " [ ").concat(Math.pow(p.maxVoxels, 1 / 3) | 0, "^3 cells ]")]; }), { label: 'Selection Detail', description: 'Determines the maximum number of voxels. Depending on the size of the volume options are in the range from 0 (0.52M voxels) to 6 (25.17M voxels).' }),
                     isSelection: PD.Boolean(false, { isHidden: true }),
                     bottomLeft: PD.Vec3(box.min, {}, { isHidden: true }),
                     topRight: PD.Vec3(box.max, {}, { isHidden: true }),
                 }, { description: 'Box around focused element.', isFlat: true })
             }, { options: VolumeStreaming.ViewTypeOptions, description: 'Controls what of the volume is displayed. "Off" hides the volume alltogether. "Bounded box" shows the volume inside the given box. "Around Interaction" shows the volume around the focused element/atom. "Whole Structure" shows the volume for the whole structure.' }),
-            detailLevel: PD.Select(Math.min(3, info.header.availablePrecisions.length - 1), info.header.availablePrecisions.map(function (p, i) { return [i, i + 1 + " [ " + (Math.pow(p.maxVoxels, 1 / 3) | 0) + "^3 cells ]"]; }), { description: 'Determines the maximum number of voxels. Depending on the size of the volume options are in the range from 0 (0.52M voxels) to 6 (25.17M voxels).' }),
+            detailLevel: PD.Select(Math.min(3, info.header.availablePrecisions.length - 1), info.header.availablePrecisions.map(function (p, i) { return [i, "".concat(i + 1, " [ ").concat(Math.pow(p.maxVoxels, 1 / 3) | 0, "^3 cells ]")]; }), { description: 'Determines the maximum number of voxels. Depending on the size of the volume options are in the range from 0 (0.52M voxels) to 6 (25.17M voxels).' }),
             channels: info.kind === 'em'
                 ? PD.Group({
                     'em': channelParam('EM', Color(0x638F8F), info.emDefaultContourLevel || Volume.IsoValue.relative(1), info.header.sampling[0].valuesInfo[0], channelParams['em'])
@@ -132,12 +132,12 @@ export { VolumeStreaming };
                 return __generator(this, function (_a) {
                     switch (_a.label) {
                         case 0:
-                            url = urlCombine(this.data.serverUrl, this.info.kind + "/" + this.info.dataId.toLowerCase());
+                            url = urlCombine(this.data.serverUrl, "".concat(this.info.kind, "/").concat(this.info.dataId.toLowerCase()));
                             if (box) {
                                 a = box.min, b = box.max;
                                 url += "/box"
-                                    + ("/" + a.map(function (v) { return Math.round(1000 * v) / 1000; }).join(','))
-                                    + ("/" + b.map(function (v) { return Math.round(1000 * v) / 1000; }).join(','));
+                                    + "/".concat(a.map(function (v) { return Math.round(1000 * v) / 1000; }).join(','))
+                                    + "/".concat(b.map(function (v) { return Math.round(1000 * v) / 1000; }).join(','));
                             }
                             else {
                                 url += "/cell";
@@ -146,7 +146,7 @@ export { VolumeStreaming };
                             if (this.params.entry.params.view.name === 'auto' && this.params.entry.params.view.params.isSelection) {
                                 detail = this.params.entry.params.view.params.selectionDetailLevel;
                             }
-                            url += "?detail=" + detail;
+                            url += "?detail=".concat(detail);
                             entry = LRUCache.get(this.cache, url);
                             if (entry)
                                 return [2 /*return*/, entry.data];

package/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/lib/mol-plugin/behavior/dynamic/volume-streaming/transformers.d.ts CHANGED Viewed

@@ -38,16 +38,16 @@ export { CreateVolumeStreamingBehavior };
 declare type CreateVolumeStreamingBehavior = typeof CreateVolumeStreamingBehavior;
 declare const CreateVolumeStreamingBehavior: StateTransformer<VolumeServerInfo, VolumeStreaming, PD.Normalize<{
     entry: PD.NamedParams<PD.Values<{
-        view: PD.Mapped<PD.NamedParams<PD.Normalize<{}>, "cell"> | PD.NamedParams<PD.Normalize<{
+        view: PD.Mapped<PD.NamedParams<PD.Normalize<{
+            bottomLeft: any;
+            topRight: any;
+        }>, "box"> | PD.NamedParams<PD.Normalize<{
             radius: any;
             selectionDetailLevel: any;
             isSelection: any;
             bottomLeft: any;
             topRight: any;
-        }>, "auto"> | PD.NamedParams<PD.Normalize<{}>, "off"> | PD.NamedParams<PD.Normalize<{
-            bottomLeft: any;
-            topRight: any;
-        }>, "box"> | PD.NamedParams<PD.Normalize<{
+        }>, "auto"> | PD.NamedParams<PD.Normalize<{}>, "off"> | PD.NamedParams<PD.Normalize<{}>, "cell"> | PD.NamedParams<PD.Normalize<{
             radius: any;
             bottomLeft: any;
             topRight: any;

package/lib/mol-plugin/behavior/dynamic/volume-streaming/transformers.js CHANGED Viewed

@@ -94,7 +94,7 @@ export var InitVolumeStreaming = StateAction.build({
                     return [3 /*break*/, 8];
                 case 7:
                     e_1 = _a.sent();
-                    console.info("Could not get map info for " + emdbId + ": " + e_1);
+                    console.info("Could not get map info for ".concat(emdbId, ": ").concat(e_1));
                     return [3 /*break*/, 9];
                 case 8:
                     addEntry(entries, params.method, emdbId, contourLevel || 0);
@@ -111,7 +111,7 @@ export var InitVolumeStreaming = StateAction.build({
                     return [3 /*break*/, 14];
                 case 13:
                     e_2 = _a.sent();
-                    console.info("Could not get map info for " + dataId + ": " + e_2);
+                    console.info("Could not get map info for ".concat(dataId, ": ").concat(e_2));
                     return [3 /*break*/, 15];
                 case 14:
                     addEntry(entries, params.method, dataId, emDefaultContourLevel || 0);
@@ -225,7 +225,7 @@ var CreateVolumeStreamingInfo = PluginStateTransform.BuiltIn({
                         return [4 /*yield*/, taskCtx.update('Getting server header...')];
                     case 2:
                         _a.sent();
-                        return [4 /*yield*/, plugin.fetch({ url: urlCombine(params.serverUrl, e.source.name + "/" + dataId.toLocaleLowerCase()), type: 'json' }).runInContext(taskCtx)];
+                        return [4 /*yield*/, plugin.fetch({ url: urlCombine(params.serverUrl, "".concat(e.source.name, "/").concat(dataId.toLocaleLowerCase())), type: 'json' }).runInContext(taskCtx)];
                     case 3:
                         header = _a.sent();
                         entries.push({
@@ -244,7 +244,7 @@ var CreateVolumeStreamingInfo = PluginStateTransform.BuiltIn({
                             entries: entries,
                             structure: a.data
                         };
-                        return [2 /*return*/, new VolumeServerInfo(data, { label: 'Volume Server', description: "" + entries.map(function (e) { return e.dataId; }).join(', ') })];
+                        return [2 /*return*/, new VolumeServerInfo(data, { label: 'Volume Server', description: "".concat(entries.map(function (e) { return e.dataId; }).join(', ')) })];
                 }
             });
         }); });
@@ -341,7 +341,7 @@ var VolumeStreamingVisual = PluginStateTransform.BuiltIn({
                         _c.sent();
                         if (transform)
                             repr.setState({ transform: transform });
-                        return [2 /*return*/, new SO.Volume.Representation3D({ repr: repr, sourceData: channel.data }, { label: Math.round(channel.isoValue.relativeValue * 100) / 100 + " \u03C3 [" + srcParams.channel + "]" })];
+                        return [2 /*return*/, new SO.Volume.Representation3D({ repr: repr, sourceData: channel.data }, { label: "".concat(Math.round(channel.isoValue.relativeValue * 100) / 100, " \u03C3 [").concat(srcParams.channel, "]") })];
                 }
             });
         }); });

package/lib/mol-plugin/behavior/dynamic/volume-streaming/transformers.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/lib/mol-plugin/behavior/dynamic/volume-streaming/util.js CHANGED Viewed

@@ -73,7 +73,7 @@ export function getContourLevelEmdb(plugin, taskCtx, emdbId) {
             switch (_a.label) {
                 case 0:
                     emdbHeaderServer = plugin.config.get(PluginConfig.VolumeStreaming.EmdbHeaderServer);
-                    return [4 /*yield*/, plugin.fetch({ url: emdbHeaderServer + "/" + emdbId.toUpperCase() + "/header/" + emdbId.toLowerCase() + ".xml", type: 'xml' }).runInContext(taskCtx)];
+                    return [4 /*yield*/, plugin.fetch({ url: "".concat(emdbHeaderServer, "/").concat(emdbId.toUpperCase(), "/header/").concat(emdbId.toLowerCase(), ".xml"), type: 'xml' }).runInContext(taskCtx)];
                 case 1:
                     header = _a.sent();
                     map = header.getElementsByTagName('map')[0];
@@ -92,7 +92,7 @@ export function getContourLevelPdbe(plugin, taskCtx, emdbId) {
                 case 0:
                     // TODO: parametrize URL in plugin settings?
                     emdbId = emdbId.toUpperCase();
-                    return [4 /*yield*/, plugin.fetch({ url: "https://www.ebi.ac.uk/emdb/api/entry/map/" + emdbId, type: 'json' }).runInContext(taskCtx)];
+                    return [4 /*yield*/, plugin.fetch({ url: "https://www.ebi.ac.uk/emdb/api/entry/map/".concat(emdbId), type: 'json' }).runInContext(taskCtx)];
                 case 1:
                     header = _e.sent();
                     contours = (_b = (_a = header === null || header === void 0 ? void 0 : header.map) === null || _a === void 0 ? void 0 : _a.contour_list) === null || _b === void 0 ? void 0 : _b.contour;
@@ -114,7 +114,7 @@ function getContourLevelPdbeLegacy(plugin, taskCtx, emdbId) {
                 case 0:
                     // TODO: parametrize URL in plugin settings?
                     emdbId = emdbId.toUpperCase();
-                    return [4 /*yield*/, plugin.fetch({ url: "https://www.ebi.ac.uk/pdbe/api/emdb/entry/map/" + emdbId, type: 'json' }).runInContext(taskCtx)];
+                    return [4 /*yield*/, plugin.fetch({ url: "https://www.ebi.ac.uk/pdbe/api/emdb/entry/map/".concat(emdbId), type: 'json' }).runInContext(taskCtx)];
                 case 1:
                     header = _d.sent();
                     emdbEntry = header === null || header === void 0 ? void 0 : header[emdbId];
@@ -133,7 +133,7 @@ export function getEmdbIds(plugin, taskCtx, pdbId) {
         var summary, summaryEntry, emdbIds, emdb;
         return __generator(this, function (_b) {
             switch (_b.label) {
-                case 0: return [4 /*yield*/, plugin.fetch({ url: "https://www.ebi.ac.uk/pdbe/api/pdb/entry/summary/" + pdbId, type: 'json' }).runInContext(taskCtx)];
+                case 0: return [4 /*yield*/, plugin.fetch({ url: "https://www.ebi.ac.uk/pdbe/api/pdb/entry/summary/".concat(pdbId), type: 'json' }).runInContext(taskCtx)];
                 case 1:
                     summary = _b.sent();
                     summaryEntry = summary === null || summary === void 0 ? void 0 : summary[pdbId];
@@ -141,12 +141,12 @@ export function getEmdbIds(plugin, taskCtx, pdbId) {
                     if ((_a = summaryEntry === null || summaryEntry === void 0 ? void 0 : summaryEntry[0]) === null || _a === void 0 ? void 0 : _a.related_structures) {
                         emdb = summaryEntry[0].related_structures.filter(function (s) { return s.resource === 'EMDB' && s.relationship === 'associated EM volume'; });
                         if (!emdb.length) {
-                            throw new Error("No related EMDB entry found for '" + pdbId + "'.");
+                            throw new Error("No related EMDB entry found for '".concat(pdbId, "'."));
                         }
                         emdbIds.push.apply(emdbIds, emdb.map(function (e) { return e.accession; }));
                     }
                     else {
-                        throw new Error("No related EMDB entry found for '" + pdbId + "'.");
+                        throw new Error("No related EMDB entry found for '".concat(pdbId, "'."));
                     }
                     return [2 /*return*/, emdbIds];
             }

package/lib/mol-plugin/behavior/dynamic/volume-streaming/util.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"util.js","sourceRoot":"","sources":["../../../../../src/mol-plugin/behavior/dynamic/volume-streaming/util.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;;AAEH,OAAO,EAAa,KAAK,EAAE,MAAM,iCAAiC,CAAC;AAInE,OAAO,EAAE,WAAW,EAAE,MAAM,+CAA+C,CAAC;AAC5E,OAAO,EAAE,YAAY,EAAE,MAAM,iBAAiB,CAAC;AAE/C,MAAM,UAAU,kBAAkB,CAAC,CAAa,EAAE,WAA4C;IAA5C,4BAAA,EAAA,qBAA4C;IAC1F,IAAI,CAAC,CAAC;QAAE,OAAO,WAAW,CAAC;IAE3B,IAAM,KAAK,GAAG,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;IAC1B,IAAI,CAAC,WAAW,CAAC,EAAE,CAAC,KAAK,CAAC,UAAU,CAAC;QAAE,OAAO,WAAW,CAAC;IAE1D,8FAA8F;IAC9F,8FAA8F;IAC9F,IAAI,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC;QAAE,OAAO,IAAI,CAAC;IACvC,IAAI,KAAK,CAAC,UAAU,CAAC,KAAK,CAAC;QAAE,OAAO,OAAO,CAAC;IAE5C,yCAAyC;IACzC,IAAI,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC;QAAE,OAAO,IAAI,CAAC;IACvC,IAAI,KAAK,CAAC,UAAU,CAAC,KAAK,CAAC;QAAE,OAAO,OAAO,CAAC;IAC5C,OAAO,WAAW,CAAC;AACvB,CAAC;AAED,oEAAoE;AACpE,MAAM,UAAU,QAAQ,CAAC,KAAY;IACjC,IAAM,GAAG,GAAa,EAAE,CAAC;IACzB,IAAI,CAAC,WAAW,CAAC,EAAE,CAAC,KAAK,CAAC,UAAU,CAAC;QAAE,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;IAExD,IAAA,KAAmC,KAAK,CAAC,UAAU,CAAC,IAAI,CAAC,EAAE,CAAC,qBAAqB,EAA/E,KAAK,WAAA,EAAE,OAAO,aAAA,EAAE,YAAY,kBAAmD,CAAC;IACxF,IAAI,CAAC,OAAO,CAAC,SAAS;QAAE,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;IAE/C,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,OAAO,CAAC,QAAQ,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;QAChD,IAAI,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,WAAW,EAAE,KAAK,MAAM,IAAI,YAAY,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,sBAAsB,EAAE;YAC/F,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC;SAC5B;KACJ;IAED,OAAO,GAAG,CAAC;AACf,CAAC;AAED,MAAM,UAAU,UAAU,CAAC,KAAY;IACnC,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;AAC3B,CAAC;AAED,MAAM,UAAU,MAAM,CAAC,MAA6B,EAAE,CAAa;IAC/D,IAAI,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,MAAM,CAAC,MAAM;QAAE,OAAO,EAAE,CAAC;IACtC,IAAM,KAAK,GAAG,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;IAC1B,QAAQ,MAAM,EAAE;QACZ,KAAK,IAAI,CAAC,CAAC,OAAO,QAAQ,CAAC,KAAK,CAAC,CAAC;QAClC,KAAK,OAAO,CAAC,CAAC,OAAO,UAAU,CAAC,KAAK,CAAC,CAAC;KAC1C;AACL,CAAC;AAED,MAAM,UAAgB,eAAe,CAAC,QAAyB,EAAE,MAAqB,EAAE,OAAuB,EAAE,MAAc;;;YAC3H,QAAQ,QAAQ,EAAE;gBACd,KAAK,MAAM,CAAC,CAAC,sBAAO,mBAAmB,CAAC,MAAM,EAAE,OAAO,EAAE,MAAM,CAAC,EAAC;gBACjE,KAAK,MAAM,CAAC,CAAC,sBAAO,mBAAmB,CAAC,MAAM,EAAE,OAAO,EAAE,MAAM,CAAC,EAAC;aACpE;;;;CACJ;AAED,MAAM,UAAgB,mBAAmB,CAAC,MAAqB,EAAE,OAAuB,EAAE,MAAc;;;;;;oBAC9F,gBAAgB,GAAG,MAAM,CAAC,MAAM,CAAC,GAAG,CAAC,YAAY,CAAC,eAAe,CAAC,gBAAgB,CAAC,CAAC;oBAC3E,qBAAM,MAAM,CAAC,KAAK,CAAC,EAAE,GAAG,EAAE,UAAG,gBAAgB,cAAI,MAAM,CAAC,WAAW,EAAE,qBAAW,MAAM,CAAC,WAAW,EAAE,SAAM,EAAE,IAAI,EAAE,KAAK,EAAE,CAAC,CAAC,YAAY,CAAC,OAAO,CAAC,EAAA;;oBAAzJ,MAAM,GAAG,SAAgJ;oBACzJ,GAAG,GAAG,MAAM,CAAC,oBAAoB,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC;oBAC5C,YAAY,GAAG,UAAU,CAAC,GAAG,CAAC,oBAAoB,CAAC,cAAc,CAAC,CAAC,CAAC,CAAC,CAAC,WAAY,CAAC,CAAC;oBAE1F,sBAAO,YAAY,EAAC;;;;CACvB;AAED,MAAM,UAAgB,mBAAmB,CAAC,MAAqB,EAAE,OAAuB,EAAE,MAAc;;;;;;;oBACpG,4CAA4C;oBAC5C,MAAM,GAAG,MAAM,CAAC,WAAW,EAAE,CAAC;oBACf,qBAAM,MAAM,CAAC,KAAK,CAAC,EAAE,GAAG,EAAE,mDAA4C,MAAM,CAAE,EAAE,IAAI,EAAE,MAAM,EAAE,CAAC,CAAC,YAAY,CAAC,OAAO,CAAC,EAAA;;oBAA9H,MAAM,GAAG,SAAqH;oBAC9H,QAAQ,GAAG,MAAA,MAAA,MAAM,aAAN,MAAM,uBAAN,MAAM,CAAE,GAAG,0CAAE,YAAY,0CAAE,OAAO,CAAC;oBAEpD,IAAI,CAAC,QAAQ,IAAI,QAAQ,CAAC,MAAM,KAAK,CAAC,EAAE;wBACpC,8BAA8B;wBAC9B,sBAAO,yBAAyB,CAAC,MAAM,EAAE,OAAO,EAAE,MAAM,CAAC,EAAC;qBAC7D;oBAED,sBAAO,MAAA,MAAA,QAAQ,CAAC,IAAI,CAAC,UAAC,CAAM,IAAK,OAAA,CAAC,CAAC,OAAO,EAAT,CAAS,CAAC,0CAAE,KAAK,mCAAI,QAAQ,CAAC,CAAC,CAAC,CAAC,KAAK,EAAC;;;;CAC3E;AAED,SAAe,yBAAyB,CAAC,MAAqB,EAAE,OAAuB,EAAE,MAAc;;;;;;;oBACnG,4CAA4C;oBAC5C,MAAM,GAAG,MAAM,CAAC,WAAW,EAAE,CAAC;oBACf,qBAAM,MAAM,CAAC,KAAK,CAAC,EAAE,GAAG,EAAE,wDAAiD,MAAM,CAAE,EAAE,IAAI,EAAE,MAAM,EAAE,CAAC,CAAC,YAAY,CAAC,OAAO,CAAC,EAAA;;oBAAnI,MAAM,GAAG,SAA0H;oBACnI,SAAS,GAAG,MAAM,aAAN,MAAM,uBAAN,MAAM,CAAG,MAAM,CAAC,CAAC;oBAC/B,YAAY,GAAuB,KAAK,CAAC,CAAC;oBAC9C,IAAI,CAAA,MAAA,MAAA,MAAA,SAAS,aAAT,SAAS,uBAAT,SAAS,CAAG,CAAC,CAAC,0CAAE,GAAG,0CAAE,aAAa,0CAAE,KAAK,MAAK,KAAK,CAAC,EAAE;wBACtD,YAAY,GAAG,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,aAAa,CAAC,KAAK,CAAC;qBACxD;oBAED,sBAAO,YAAY,EAAC;;;;CACvB;AAED,MAAM,UAAgB,UAAU,CAAC,MAAqB,EAAE,OAAuB,EAAE,KAAa;;;;;;wBAE1E,qBAAM,MAAM,CAAC,KAAK,CAAC,EAAE,GAAG,EAAE,2DAAoD,KAAK,CAAE,EAAE,IAAI,EAAE,MAAM,EAAE,CAAC,CAAC,YAAY,CAAC,OAAO,CAAC,EAAA;;oBAAtI,OAAO,GAAG,SAA4H;oBAEtI,YAAY,GAAG,OAAO,aAAP,OAAO,uBAAP,OAAO,CAAG,KAAK,CAAC,CAAC;oBAChC,OAAO,GAAa,EAAE,CAAC;oBAC7B,IAAI,MAAA,YAAY,aAAZ,YAAY,uBAAZ,YAAY,CAAG,CAAC,CAAC,0CAAE,kBAAkB,EAAE;wBACjC,IAAI,GAAG,YAAY,CAAC,CAAC,CAAC,CAAC,kBAAkB,CAAC,MAAM,CAAC,UAAC,CAAM,IAAK,OAAA,CAAC,CAAC,QAAQ,KAAK,MAAM,IAAI,CAAC,CAAC,YAAY,KAAK,sBAAsB,EAAlE,CAAkE,CAAC,CAAC;wBACvI,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE;4BACd,MAAM,IAAI,KAAK,CAAC,2CAAoC,KAAK,OAAI,CAAC,CAAC;yBAClE;wBACD,OAAO,CAAC,IAAI,OAAZ,OAAO,EAAS,IAAI,CAAC,GAAG,CAAC,UAAC,CAAwB,IAAK,OAAA,CAAC,CAAC,SAAS,EAAX,CAAW,CAAC,EAAE;qBACxE;yBAAM;wBACH,MAAM,IAAI,KAAK,CAAC,2CAAoC,KAAK,OAAI,CAAC,CAAC;qBAClE;oBAED,sBAAO,OAAO,EAAC;;;;CAClB"}

package/lib/mol-plugin/behavior/static/state.js CHANGED Viewed

@@ -180,7 +180,7 @@ export function Snapshots(ctx) {
     });
     PluginCommands.State.Snapshots.Upload.subscribe(ctx, function (_a) {
         var name = _a.name, description = _a.description, playOnLoad = _a.playOnLoad, serverUrl = _a.serverUrl, params = _a.params;
-        return fetch(urlCombine(serverUrl, "set?name=" + encodeURIComponent(name || '') + "&description=" + encodeURIComponent(description || '')), {
+        return fetch(urlCombine(serverUrl, "set?name=".concat(encodeURIComponent(name || ''), "&description=").concat(encodeURIComponent(description || ''))), {
             method: 'POST',
             mode: 'cors',
             referrer: 'no-referrer',
@@ -212,11 +212,11 @@ export function Snapshots(ctx) {
             return __generator(this, function (_b) {
                 switch (_b.label) {
                     case 0:
-                        filename = "mol-star_state_" + (name || getFormattedTime()) + "." + (type === 'json' ? 'molj' : 'molx');
+                        filename = "mol-star_state_".concat((name || getFormattedTime()), ".").concat(type === 'json' ? 'molj' : 'molx');
                         return [4 /*yield*/, ctx.managers.snapshot.serialize({ type: type, params: params })];
                     case 1:
                         data = _b.sent();
-                        download(data, "" + filename);
+                        download(data, "".concat(filename));
                         return [2 /*return*/];
                 }
             });
@@ -235,7 +235,7 @@ export function Snapshots(ctx) {
                     case 0: return [4 /*yield*/, ctx.runTask(ctx.fetch({ url: url, type: 'binary' }))];
                     case 1:
                         data = _b.sent();
-                        return [2 /*return*/, ctx.managers.snapshot.open(new File([data], "state." + type))];
+                        return [2 /*return*/, ctx.managers.snapshot.open(new File([data], "state.".concat(type)))];
                 }
             });
         });