scipy 1.16.2__cp313-cp313t-win_arm64.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- scipy/__config__.py +161 -0
- scipy/__init__.py +150 -0
- scipy/_cyutility.cp313t-win_arm64.lib +0 -0
- scipy/_cyutility.cp313t-win_arm64.pyd +0 -0
- scipy/_distributor_init.py +18 -0
- scipy/_lib/__init__.py +14 -0
- scipy/_lib/_array_api.py +931 -0
- scipy/_lib/_array_api_compat_vendor.py +9 -0
- scipy/_lib/_array_api_no_0d.py +103 -0
- scipy/_lib/_bunch.py +229 -0
- scipy/_lib/_ccallback.py +251 -0
- scipy/_lib/_ccallback_c.cp313t-win_arm64.lib +0 -0
- scipy/_lib/_ccallback_c.cp313t-win_arm64.pyd +0 -0
- scipy/_lib/_disjoint_set.py +254 -0
- scipy/_lib/_docscrape.py +761 -0
- scipy/_lib/_elementwise_iterative_method.py +346 -0
- scipy/_lib/_fpumode.cp313t-win_arm64.lib +0 -0
- scipy/_lib/_fpumode.cp313t-win_arm64.pyd +0 -0
- scipy/_lib/_gcutils.py +105 -0
- scipy/_lib/_pep440.py +487 -0
- scipy/_lib/_sparse.py +41 -0
- scipy/_lib/_test_ccallback.cp313t-win_arm64.lib +0 -0
- scipy/_lib/_test_ccallback.cp313t-win_arm64.pyd +0 -0
- scipy/_lib/_test_deprecation_call.cp313t-win_arm64.lib +0 -0
- scipy/_lib/_test_deprecation_call.cp313t-win_arm64.pyd +0 -0
- scipy/_lib/_test_deprecation_def.cp313t-win_arm64.lib +0 -0
- scipy/_lib/_test_deprecation_def.cp313t-win_arm64.pyd +0 -0
- scipy/_lib/_testutils.py +373 -0
- scipy/_lib/_threadsafety.py +58 -0
- scipy/_lib/_tmpdirs.py +86 -0
- scipy/_lib/_uarray/LICENSE +29 -0
- scipy/_lib/_uarray/__init__.py +116 -0
- scipy/_lib/_uarray/_backend.py +707 -0
- scipy/_lib/_uarray/_uarray.cp313t-win_arm64.lib +0 -0
- scipy/_lib/_uarray/_uarray.cp313t-win_arm64.pyd +0 -0
- scipy/_lib/_util.py +1283 -0
- scipy/_lib/array_api_compat/__init__.py +22 -0
- scipy/_lib/array_api_compat/_internal.py +59 -0
- scipy/_lib/array_api_compat/common/__init__.py +1 -0
- scipy/_lib/array_api_compat/common/_aliases.py +727 -0
- scipy/_lib/array_api_compat/common/_fft.py +213 -0
- scipy/_lib/array_api_compat/common/_helpers.py +1058 -0
- scipy/_lib/array_api_compat/common/_linalg.py +232 -0
- scipy/_lib/array_api_compat/common/_typing.py +192 -0
- scipy/_lib/array_api_compat/cupy/__init__.py +13 -0
- scipy/_lib/array_api_compat/cupy/_aliases.py +156 -0
- scipy/_lib/array_api_compat/cupy/_info.py +336 -0
- scipy/_lib/array_api_compat/cupy/_typing.py +31 -0
- scipy/_lib/array_api_compat/cupy/fft.py +36 -0
- scipy/_lib/array_api_compat/cupy/linalg.py +49 -0
- scipy/_lib/array_api_compat/dask/__init__.py +0 -0
- scipy/_lib/array_api_compat/dask/array/__init__.py +12 -0
- scipy/_lib/array_api_compat/dask/array/_aliases.py +376 -0
- scipy/_lib/array_api_compat/dask/array/_info.py +416 -0
- scipy/_lib/array_api_compat/dask/array/fft.py +21 -0
- scipy/_lib/array_api_compat/dask/array/linalg.py +72 -0
- scipy/_lib/array_api_compat/numpy/__init__.py +28 -0
- scipy/_lib/array_api_compat/numpy/_aliases.py +190 -0
- scipy/_lib/array_api_compat/numpy/_info.py +366 -0
- scipy/_lib/array_api_compat/numpy/_typing.py +30 -0
- scipy/_lib/array_api_compat/numpy/fft.py +35 -0
- scipy/_lib/array_api_compat/numpy/linalg.py +143 -0
- scipy/_lib/array_api_compat/torch/__init__.py +22 -0
- scipy/_lib/array_api_compat/torch/_aliases.py +855 -0
- scipy/_lib/array_api_compat/torch/_info.py +369 -0
- scipy/_lib/array_api_compat/torch/_typing.py +3 -0
- scipy/_lib/array_api_compat/torch/fft.py +85 -0
- scipy/_lib/array_api_compat/torch/linalg.py +121 -0
- scipy/_lib/array_api_extra/__init__.py +38 -0
- scipy/_lib/array_api_extra/_delegation.py +171 -0
- scipy/_lib/array_api_extra/_lib/__init__.py +1 -0
- scipy/_lib/array_api_extra/_lib/_at.py +463 -0
- scipy/_lib/array_api_extra/_lib/_backends.py +46 -0
- scipy/_lib/array_api_extra/_lib/_funcs.py +937 -0
- scipy/_lib/array_api_extra/_lib/_lazy.py +357 -0
- scipy/_lib/array_api_extra/_lib/_testing.py +278 -0
- scipy/_lib/array_api_extra/_lib/_utils/__init__.py +1 -0
- scipy/_lib/array_api_extra/_lib/_utils/_compat.py +74 -0
- scipy/_lib/array_api_extra/_lib/_utils/_compat.pyi +45 -0
- scipy/_lib/array_api_extra/_lib/_utils/_helpers.py +559 -0
- scipy/_lib/array_api_extra/_lib/_utils/_typing.py +10 -0
- scipy/_lib/array_api_extra/_lib/_utils/_typing.pyi +105 -0
- scipy/_lib/array_api_extra/testing.py +359 -0
- scipy/_lib/cobyqa/__init__.py +20 -0
- scipy/_lib/cobyqa/framework.py +1240 -0
- scipy/_lib/cobyqa/main.py +1506 -0
- scipy/_lib/cobyqa/models.py +1529 -0
- scipy/_lib/cobyqa/problem.py +1296 -0
- scipy/_lib/cobyqa/settings.py +132 -0
- scipy/_lib/cobyqa/subsolvers/__init__.py +14 -0
- scipy/_lib/cobyqa/subsolvers/geometry.py +387 -0
- scipy/_lib/cobyqa/subsolvers/optim.py +1203 -0
- scipy/_lib/cobyqa/utils/__init__.py +18 -0
- scipy/_lib/cobyqa/utils/exceptions.py +22 -0
- scipy/_lib/cobyqa/utils/math.py +77 -0
- scipy/_lib/cobyqa/utils/versions.py +67 -0
- scipy/_lib/decorator.py +399 -0
- scipy/_lib/deprecation.py +274 -0
- scipy/_lib/doccer.py +366 -0
- scipy/_lib/messagestream.cp313t-win_arm64.lib +0 -0
- scipy/_lib/messagestream.cp313t-win_arm64.pyd +0 -0
- scipy/_lib/pyprima/__init__.py +212 -0
- scipy/_lib/pyprima/cobyla/__init__.py +0 -0
- scipy/_lib/pyprima/cobyla/cobyla.py +559 -0
- scipy/_lib/pyprima/cobyla/cobylb.py +714 -0
- scipy/_lib/pyprima/cobyla/geometry.py +226 -0
- scipy/_lib/pyprima/cobyla/initialize.py +215 -0
- scipy/_lib/pyprima/cobyla/trustregion.py +492 -0
- scipy/_lib/pyprima/cobyla/update.py +289 -0
- scipy/_lib/pyprima/common/__init__.py +0 -0
- scipy/_lib/pyprima/common/_bounds.py +34 -0
- scipy/_lib/pyprima/common/_linear_constraints.py +46 -0
- scipy/_lib/pyprima/common/_nonlinear_constraints.py +54 -0
- scipy/_lib/pyprima/common/_project.py +173 -0
- scipy/_lib/pyprima/common/checkbreak.py +93 -0
- scipy/_lib/pyprima/common/consts.py +47 -0
- scipy/_lib/pyprima/common/evaluate.py +99 -0
- scipy/_lib/pyprima/common/history.py +38 -0
- scipy/_lib/pyprima/common/infos.py +30 -0
- scipy/_lib/pyprima/common/linalg.py +435 -0
- scipy/_lib/pyprima/common/message.py +290 -0
- scipy/_lib/pyprima/common/powalg.py +131 -0
- scipy/_lib/pyprima/common/preproc.py +277 -0
- scipy/_lib/pyprima/common/present.py +5 -0
- scipy/_lib/pyprima/common/ratio.py +54 -0
- scipy/_lib/pyprima/common/redrho.py +47 -0
- scipy/_lib/pyprima/common/selectx.py +296 -0
- scipy/_lib/tests/__init__.py +0 -0
- scipy/_lib/tests/test__gcutils.py +110 -0
- scipy/_lib/tests/test__pep440.py +67 -0
- scipy/_lib/tests/test__testutils.py +32 -0
- scipy/_lib/tests/test__threadsafety.py +51 -0
- scipy/_lib/tests/test__util.py +641 -0
- scipy/_lib/tests/test_array_api.py +322 -0
- scipy/_lib/tests/test_bunch.py +169 -0
- scipy/_lib/tests/test_ccallback.py +196 -0
- scipy/_lib/tests/test_config.py +45 -0
- scipy/_lib/tests/test_deprecation.py +10 -0
- scipy/_lib/tests/test_doccer.py +143 -0
- scipy/_lib/tests/test_import_cycles.py +18 -0
- scipy/_lib/tests/test_public_api.py +482 -0
- scipy/_lib/tests/test_scipy_version.py +28 -0
- scipy/_lib/tests/test_tmpdirs.py +48 -0
- scipy/_lib/tests/test_warnings.py +137 -0
- scipy/_lib/uarray.py +31 -0
- scipy/cluster/__init__.py +31 -0
- scipy/cluster/_hierarchy.cp313t-win_arm64.lib +0 -0
- scipy/cluster/_hierarchy.cp313t-win_arm64.pyd +0 -0
- scipy/cluster/_optimal_leaf_ordering.cp313t-win_arm64.lib +0 -0
- scipy/cluster/_optimal_leaf_ordering.cp313t-win_arm64.pyd +0 -0
- scipy/cluster/_vq.cp313t-win_arm64.lib +0 -0
- scipy/cluster/_vq.cp313t-win_arm64.pyd +0 -0
- scipy/cluster/hierarchy.py +4348 -0
- scipy/cluster/tests/__init__.py +0 -0
- scipy/cluster/tests/hierarchy_test_data.py +145 -0
- scipy/cluster/tests/test_disjoint_set.py +202 -0
- scipy/cluster/tests/test_hierarchy.py +1238 -0
- scipy/cluster/tests/test_vq.py +434 -0
- scipy/cluster/vq.py +832 -0
- scipy/conftest.py +683 -0
- scipy/constants/__init__.py +358 -0
- scipy/constants/_codata.py +2266 -0
- scipy/constants/_constants.py +369 -0
- scipy/constants/codata.py +21 -0
- scipy/constants/constants.py +53 -0
- scipy/constants/tests/__init__.py +0 -0
- scipy/constants/tests/test_codata.py +78 -0
- scipy/constants/tests/test_constants.py +83 -0
- scipy/datasets/__init__.py +90 -0
- scipy/datasets/_download_all.py +71 -0
- scipy/datasets/_fetchers.py +225 -0
- scipy/datasets/_registry.py +26 -0
- scipy/datasets/_utils.py +81 -0
- scipy/datasets/tests/__init__.py +0 -0
- scipy/datasets/tests/test_data.py +128 -0
- scipy/differentiate/__init__.py +27 -0
- scipy/differentiate/_differentiate.py +1129 -0
- scipy/differentiate/tests/__init__.py +0 -0
- scipy/differentiate/tests/test_differentiate.py +694 -0
- scipy/fft/__init__.py +114 -0
- scipy/fft/_backend.py +196 -0
- scipy/fft/_basic.py +1650 -0
- scipy/fft/_basic_backend.py +197 -0
- scipy/fft/_debug_backends.py +22 -0
- scipy/fft/_fftlog.py +223 -0
- scipy/fft/_fftlog_backend.py +200 -0
- scipy/fft/_helper.py +348 -0
- scipy/fft/_pocketfft/LICENSE.md +25 -0
- scipy/fft/_pocketfft/__init__.py +9 -0
- scipy/fft/_pocketfft/basic.py +251 -0
- scipy/fft/_pocketfft/helper.py +249 -0
- scipy/fft/_pocketfft/pypocketfft.cp313t-win_arm64.lib +0 -0
- scipy/fft/_pocketfft/pypocketfft.cp313t-win_arm64.pyd +0 -0
- scipy/fft/_pocketfft/realtransforms.py +109 -0
- scipy/fft/_pocketfft/tests/__init__.py +0 -0
- scipy/fft/_pocketfft/tests/test_basic.py +1011 -0
- scipy/fft/_pocketfft/tests/test_real_transforms.py +505 -0
- scipy/fft/_realtransforms.py +706 -0
- scipy/fft/_realtransforms_backend.py +63 -0
- scipy/fft/tests/__init__.py +0 -0
- scipy/fft/tests/mock_backend.py +96 -0
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- scipy/fft/tests/test_fftlog.py +215 -0
- scipy/fft/tests/test_helper.py +558 -0
- scipy/fft/tests/test_multithreading.py +84 -0
- scipy/fft/tests/test_real_transforms.py +247 -0
- scipy/fftpack/__init__.py +103 -0
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- scipy/fftpack/_realtransforms.py +598 -0
- scipy/fftpack/basic.py +20 -0
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- scipy/fftpack/pseudo_diffs.py +22 -0
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- scipy/fftpack/tests/test_import.py +33 -0
- scipy/fftpack/tests/test_pseudo_diffs.py +388 -0
- scipy/fftpack/tests/test_real_transforms.py +836 -0
- scipy/integrate/__init__.py +122 -0
- scipy/integrate/_bvp.py +1160 -0
- scipy/integrate/_cubature.py +729 -0
- scipy/integrate/_dop.cp313t-win_arm64.lib +0 -0
- scipy/integrate/_dop.cp313t-win_arm64.pyd +0 -0
- scipy/integrate/_ivp/__init__.py +8 -0
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- scipy/integrate/_ivp/dop853_coefficients.py +193 -0
- scipy/integrate/_ivp/ivp.py +755 -0
- scipy/integrate/_ivp/lsoda.py +224 -0
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- scipy/integrate/_ivp/rk.py +601 -0
- scipy/integrate/_ivp/tests/__init__.py +0 -0
- scipy/integrate/_ivp/tests/test_ivp.py +1287 -0
- scipy/integrate/_ivp/tests/test_rk.py +37 -0
- scipy/integrate/_lebedev.py +5450 -0
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- scipy/integrate/_ode.py +1395 -0
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- scipy/integrate/_rules/__init__.py +12 -0
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- scipy/integrate/_rules/_gauss_kronrod.py +202 -0
- scipy/integrate/_rules/_gauss_legendre.py +62 -0
- scipy/integrate/_rules/_genz_malik.py +210 -0
- scipy/integrate/_tanhsinh.py +1385 -0
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- scipy/integrate/tests/test_tanhsinh.py +1171 -0
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Test cdflib functions versus mpmath, if available.
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import itertools
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import scipy.special as sp
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from scipy.special._testutils import (
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MissingModule, check_version, FuncData)
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from scipy.special._mptestutils import (
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Arg, IntArg, get_args, mpf2float, assert_mpmath_equal)
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class ProbArg:
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v2 = np.linspace(0.3, 0.7, m + 1, endpoint=False)[1:]
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endpt_rtol=None, endpt_atol=None):
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else:
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self.endpt_rtol = [endpt_rtol]*len(self.argspec)
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if isinstance(endpt_atol, list):
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self.endpt_atol = endpt_atol
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else:
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self.endpt_rtol = None
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def idmap(self, *args):
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args = list(args)
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args[self.index] = res
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with mpmath.workdps(self.dps):
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res = self.mpfunc(*tuple(args))
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args = list(args)
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args[self.index] = res
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res = self.spfunc(*tuple(args))
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return res
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def get_param_filter(self):
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return None
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filters = []
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for rtol, atol, spec in zip(self.endpt_rtol, self.endpt_atol, self.argspec):
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filters.append(None)
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continue
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atol = 0.0
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filters.append(EndpointFilter(spec.a, spec.b, rtol, atol))
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return filters
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def check(self):
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# Generate values for the arguments
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args = get_args(self.argspec, self.n)
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param_filter = self.get_param_filter()
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param_columns = tuple(range(args.shape[1]))
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result_columns = args.shape[1]
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args = np.hstack((args, args[:, self.index].reshape(args.shape[0], 1)))
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FuncData(self.idmap, args,
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param_columns=param_columns, result_columns=result_columns,
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rtol=self.rtol, atol=self.atol, vectorized=False,
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param_filter=param_filter).check()
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def _assert_inverts(*a, **kw):
|
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d = _CDFData(*a, **kw)
|
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+
d.check()
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148
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+
|
149
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+
|
150
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+
def _binomial_cdf(k, n, p):
|
151
|
+
k, n, p = mpmath.mpf(k), mpmath.mpf(n), mpmath.mpf(p)
|
152
|
+
if k <= 0:
|
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+
return mpmath.mpf(0)
|
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+
elif k >= n:
|
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+
return mpmath.mpf(1)
|
156
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+
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157
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+
onemp = mpmath.fsub(1, p, exact=True)
|
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+
return mpmath.betainc(n - k, k + 1, x2=onemp, regularized=True)
|
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+
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160
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+
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161
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+
def _f_cdf(dfn, dfd, x):
|
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+
if x < 0:
|
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+
return mpmath.mpf(0)
|
164
|
+
dfn, dfd, x = mpmath.mpf(dfn), mpmath.mpf(dfd), mpmath.mpf(x)
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+
ub = dfn*x/(dfn*x + dfd)
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+
res = mpmath.betainc(dfn/2, dfd/2, x2=ub, regularized=True)
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+
return res
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168
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+
|
169
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+
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170
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+
def _student_t_cdf(df, t, dps=None):
|
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+
if dps is None:
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+
dps = mpmath.mp.dps
|
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|
+
with mpmath.workdps(dps):
|
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+
df, t = mpmath.mpf(df), mpmath.mpf(t)
|
175
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+
fac = mpmath.hyp2f1(0.5, 0.5*(df + 1), 1.5, -t**2/df)
|
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+
fac *= t*mpmath.gamma(0.5*(df + 1))
|
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+
fac /= mpmath.sqrt(mpmath.pi*df)*mpmath.gamma(0.5*df)
|
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+
return 0.5 + fac
|
179
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+
|
180
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+
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181
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+
def _noncentral_chi_pdf(t, df, nc):
|
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+
res = mpmath.besseli(df/2 - 1, mpmath.sqrt(nc*t))
|
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+
res *= mpmath.exp(-(t + nc)/2)*(t/nc)**(df/4 - 1/2)/2
|
184
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+
return res
|
185
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+
|
186
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+
|
187
|
+
def _noncentral_chi_cdf(x, df, nc, dps=None):
|
188
|
+
if dps is None:
|
189
|
+
dps = mpmath.mp.dps
|
190
|
+
x, df, nc = mpmath.mpf(x), mpmath.mpf(df), mpmath.mpf(nc)
|
191
|
+
with mpmath.workdps(dps):
|
192
|
+
res = mpmath.quad(lambda t: _noncentral_chi_pdf(t, df, nc), [0, x])
|
193
|
+
return res
|
194
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+
|
195
|
+
|
196
|
+
def _tukey_lmbda_quantile(p, lmbda):
|
197
|
+
# For lmbda != 0
|
198
|
+
return (p**lmbda - (1 - p)**lmbda)/lmbda
|
199
|
+
|
200
|
+
|
201
|
+
@pytest.mark.slow
|
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|
+
@check_version(mpmath, '0.19')
|
203
|
+
class TestCDFlib:
|
204
|
+
|
205
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+
@pytest.mark.xfail(run=False)
|
206
|
+
def test_bdtrik(self):
|
207
|
+
_assert_inverts(
|
208
|
+
sp.bdtrik,
|
209
|
+
_binomial_cdf,
|
210
|
+
0, [ProbArg(), IntArg(1, 1000), ProbArg()],
|
211
|
+
rtol=1e-4)
|
212
|
+
|
213
|
+
def test_bdtrin(self):
|
214
|
+
_assert_inverts(
|
215
|
+
sp.bdtrin,
|
216
|
+
_binomial_cdf,
|
217
|
+
1, [IntArg(1, 1000), ProbArg(), ProbArg()],
|
218
|
+
rtol=1e-4, endpt_atol=[None, None, 1e-6])
|
219
|
+
|
220
|
+
def test_btdtria(self):
|
221
|
+
_assert_inverts(
|
222
|
+
sp.btdtria,
|
223
|
+
lambda a, b, x: mpmath.betainc(a, b, x2=x, regularized=True),
|
224
|
+
0, [ProbArg(), Arg(0, 1e2, inclusive_a=False),
|
225
|
+
Arg(0, 1, inclusive_a=False, inclusive_b=False)],
|
226
|
+
rtol=1e-6)
|
227
|
+
|
228
|
+
def test_btdtrib(self):
|
229
|
+
# Use small values of a or mpmath doesn't converge
|
230
|
+
_assert_inverts(
|
231
|
+
sp.btdtrib,
|
232
|
+
lambda a, b, x: mpmath.betainc(a, b, x2=x, regularized=True),
|
233
|
+
1,
|
234
|
+
[Arg(0, 1e2, inclusive_a=False), ProbArg(),
|
235
|
+
Arg(0, 1, inclusive_a=False, inclusive_b=False)],
|
236
|
+
rtol=1e-7,
|
237
|
+
endpt_atol=[None, 1e-18, 1e-15])
|
238
|
+
|
239
|
+
@pytest.mark.xfail(run=False)
|
240
|
+
def test_fdtridfd(self):
|
241
|
+
_assert_inverts(
|
242
|
+
sp.fdtridfd,
|
243
|
+
_f_cdf,
|
244
|
+
1,
|
245
|
+
[IntArg(1, 100), ProbArg(), Arg(0, 100, inclusive_a=False)],
|
246
|
+
rtol=1e-7)
|
247
|
+
|
248
|
+
def test_gdtria(self):
|
249
|
+
_assert_inverts(
|
250
|
+
sp.gdtria,
|
251
|
+
lambda a, b, x: mpmath.gammainc(b, b=a*x, regularized=True),
|
252
|
+
0,
|
253
|
+
[ProbArg(), Arg(0, 1e3, inclusive_a=False),
|
254
|
+
Arg(0, 1e4, inclusive_a=False)],
|
255
|
+
rtol=1e-7,
|
256
|
+
endpt_atol=[None, 1e-7, 1e-10])
|
257
|
+
|
258
|
+
def test_gdtrib(self):
|
259
|
+
# Use small values of a and x or mpmath doesn't converge
|
260
|
+
_assert_inverts(
|
261
|
+
sp.gdtrib,
|
262
|
+
lambda a, b, x: mpmath.gammainc(b, b=a*x, regularized=True),
|
263
|
+
1,
|
264
|
+
[Arg(0, 1e2, inclusive_a=False), ProbArg(),
|
265
|
+
Arg(0, 1e3, inclusive_a=False)],
|
266
|
+
rtol=1e-5)
|
267
|
+
|
268
|
+
def test_gdtrix(self):
|
269
|
+
_assert_inverts(
|
270
|
+
sp.gdtrix,
|
271
|
+
lambda a, b, x: mpmath.gammainc(b, b=a*x, regularized=True),
|
272
|
+
2,
|
273
|
+
[Arg(0, 1e3, inclusive_a=False), Arg(0, 1e3, inclusive_a=False),
|
274
|
+
ProbArg()],
|
275
|
+
rtol=1e-7,
|
276
|
+
endpt_atol=[None, 1e-7, 1e-10])
|
277
|
+
|
278
|
+
# Overall nrdtrimn and nrdtrisd are not performing well with infeasible/edge
|
279
|
+
# combinations of sigma and x, hence restricted the domains to still use the
|
280
|
+
# testing machinery, also see gh-20069
|
281
|
+
|
282
|
+
# nrdtrimn signature: p, sd, x
|
283
|
+
# nrdtrisd signature: mn, p, x
|
284
|
+
def test_nrdtrimn(self):
|
285
|
+
_assert_inverts(
|
286
|
+
sp.nrdtrimn,
|
287
|
+
lambda x, y, z: mpmath.ncdf(z, x, y),
|
288
|
+
0,
|
289
|
+
[ProbArg(), # CDF value p
|
290
|
+
Arg(0.1, np.inf, inclusive_a=False, inclusive_b=False), # sigma
|
291
|
+
Arg(-1e10, 1e10)], # x
|
292
|
+
rtol=1e-5)
|
293
|
+
|
294
|
+
def test_nrdtrisd(self):
|
295
|
+
_assert_inverts(
|
296
|
+
sp.nrdtrisd,
|
297
|
+
lambda x, y, z: mpmath.ncdf(z, x, y),
|
298
|
+
1,
|
299
|
+
[Arg(-np.inf, 10, inclusive_a=False, inclusive_b=False), # mn
|
300
|
+
ProbArg(), # CDF value p
|
301
|
+
Arg(10, 1e100)], # x
|
302
|
+
rtol=1e-5)
|
303
|
+
|
304
|
+
def test_stdtr(self):
|
305
|
+
# Ideally the left endpoint for Arg() should be 0.
|
306
|
+
assert_mpmath_equal(
|
307
|
+
sp.stdtr,
|
308
|
+
_student_t_cdf,
|
309
|
+
[IntArg(1, 100), Arg(1e-10, np.inf)], rtol=1e-7)
|
310
|
+
|
311
|
+
@pytest.mark.xfail(run=False)
|
312
|
+
def test_stdtridf(self):
|
313
|
+
_assert_inverts(
|
314
|
+
sp.stdtridf,
|
315
|
+
_student_t_cdf,
|
316
|
+
0, [ProbArg(), Arg()], rtol=1e-7)
|
317
|
+
|
318
|
+
def test_stdtrit(self):
|
319
|
+
_assert_inverts(
|
320
|
+
sp.stdtrit,
|
321
|
+
_student_t_cdf,
|
322
|
+
1, [IntArg(1, 100), ProbArg()], rtol=1e-7,
|
323
|
+
endpt_atol=[None, 1e-10])
|
324
|
+
|
325
|
+
def test_chdtriv(self):
|
326
|
+
_assert_inverts(
|
327
|
+
sp.chdtriv,
|
328
|
+
lambda v, x: mpmath.gammainc(v/2, b=x/2, regularized=True),
|
329
|
+
0, [ProbArg(), IntArg(1, 100)], rtol=1e-4)
|
330
|
+
|
331
|
+
@pytest.mark.xfail(run=False)
|
332
|
+
def test_chndtridf(self):
|
333
|
+
# Use a larger atol since mpmath is doing numerical integration
|
334
|
+
_assert_inverts(
|
335
|
+
sp.chndtridf,
|
336
|
+
_noncentral_chi_cdf,
|
337
|
+
1, [Arg(0, 100, inclusive_a=False), ProbArg(),
|
338
|
+
Arg(0, 100, inclusive_a=False)],
|
339
|
+
n=1000, rtol=1e-4, atol=1e-15)
|
340
|
+
|
341
|
+
@pytest.mark.xfail(run=False)
|
342
|
+
def test_chndtrinc(self):
|
343
|
+
# Use a larger atol since mpmath is doing numerical integration
|
344
|
+
_assert_inverts(
|
345
|
+
sp.chndtrinc,
|
346
|
+
_noncentral_chi_cdf,
|
347
|
+
2, [Arg(0, 100, inclusive_a=False), IntArg(1, 100), ProbArg()],
|
348
|
+
n=1000, rtol=1e-4, atol=1e-15)
|
349
|
+
|
350
|
+
def test_chndtrix(self):
|
351
|
+
# Use a larger atol since mpmath is doing numerical integration
|
352
|
+
_assert_inverts(
|
353
|
+
sp.chndtrix,
|
354
|
+
_noncentral_chi_cdf,
|
355
|
+
0, [ProbArg(), IntArg(1, 100), Arg(0, 100, inclusive_a=False)],
|
356
|
+
n=1000, rtol=1e-4, atol=1e-15,
|
357
|
+
endpt_atol=[1e-6, None, None])
|
358
|
+
|
359
|
+
def test_tklmbda_zero_shape(self):
|
360
|
+
# When lmbda = 0 the CDF has a simple closed form
|
361
|
+
one = mpmath.mpf(1)
|
362
|
+
assert_mpmath_equal(
|
363
|
+
lambda x: sp.tklmbda(x, 0),
|
364
|
+
lambda x: one/(mpmath.exp(-x) + one),
|
365
|
+
[Arg()], rtol=1e-7)
|
366
|
+
|
367
|
+
def test_tklmbda_neg_shape(self):
|
368
|
+
_assert_inverts(
|
369
|
+
sp.tklmbda,
|
370
|
+
_tukey_lmbda_quantile,
|
371
|
+
0, [ProbArg(), Arg(-25, 0, inclusive_b=False)],
|
372
|
+
spfunc_first=False, rtol=1e-5,
|
373
|
+
endpt_atol=[1e-9, 1e-5])
|
374
|
+
|
375
|
+
@pytest.mark.xfail(run=False)
|
376
|
+
def test_tklmbda_pos_shape(self):
|
377
|
+
_assert_inverts(
|
378
|
+
sp.tklmbda,
|
379
|
+
_tukey_lmbda_quantile,
|
380
|
+
0, [ProbArg(), Arg(0, 100, inclusive_a=False)],
|
381
|
+
spfunc_first=False, rtol=1e-5)
|
382
|
+
|
383
|
+
# The values of lmdba are chosen so that 1/lmbda is exact.
|
384
|
+
@pytest.mark.parametrize('lmbda', [0.5, 1.0, 8.0])
|
385
|
+
def test_tklmbda_lmbda1(self, lmbda):
|
386
|
+
bound = 1/lmbda
|
387
|
+
assert_equal(sp.tklmbda([-bound, bound], lmbda), [0.0, 1.0])
|
388
|
+
|
389
|
+
|
390
|
+
funcs = [
|
391
|
+
("btdtria", 3),
|
392
|
+
("btdtrib", 3),
|
393
|
+
("bdtrik", 3),
|
394
|
+
("bdtrin", 3),
|
395
|
+
("chdtriv", 2),
|
396
|
+
("chndtr", 3),
|
397
|
+
("chndtrix", 3),
|
398
|
+
("chndtridf", 3),
|
399
|
+
("chndtrinc", 3),
|
400
|
+
("fdtridfd", 3),
|
401
|
+
("ncfdtr", 4),
|
402
|
+
("ncfdtri", 4),
|
403
|
+
("ncfdtridfn", 4),
|
404
|
+
("ncfdtridfd", 4),
|
405
|
+
("ncfdtrinc", 4),
|
406
|
+
("gdtrix", 3),
|
407
|
+
("gdtrib", 3),
|
408
|
+
("gdtria", 3),
|
409
|
+
("nbdtrik", 3),
|
410
|
+
("nbdtrin", 3),
|
411
|
+
("nrdtrimn", 3),
|
412
|
+
("nrdtrisd", 3),
|
413
|
+
("pdtrik", 2),
|
414
|
+
("stdtr", 2),
|
415
|
+
("stdtrit", 2),
|
416
|
+
("stdtridf", 2),
|
417
|
+
("nctdtr", 3),
|
418
|
+
("nctdtrit", 3),
|
419
|
+
("nctdtridf", 3),
|
420
|
+
("nctdtrinc", 3),
|
421
|
+
("tklmbda", 2),
|
422
|
+
]
|
423
|
+
|
424
|
+
|
425
|
+
@pytest.mark.parametrize('func,numargs', funcs, ids=[x[0] for x in funcs])
|
426
|
+
def test_nonfinite(func, numargs):
|
427
|
+
|
428
|
+
rng = np.random.default_rng(1701299355559735)
|
429
|
+
func = getattr(sp, func)
|
430
|
+
args_choices = [(float(x), np.nan, np.inf, -np.inf) for x in rng.random(numargs)]
|
431
|
+
|
432
|
+
for args in itertools.product(*args_choices):
|
433
|
+
res = func(*args)
|
434
|
+
|
435
|
+
if any(np.isnan(x) for x in args):
|
436
|
+
# Nan inputs should result to nan output
|
437
|
+
assert_equal(res, np.nan)
|
438
|
+
else:
|
439
|
+
# All other inputs should return something (but not
|
440
|
+
# raise exceptions or cause hangs)
|
441
|
+
pass
|
442
|
+
|
443
|
+
|
444
|
+
def test_chndtrix_gh2158():
|
445
|
+
# test that gh-2158 is resolved; previously this blew up
|
446
|
+
res = sp.chndtrix(0.999999, 2, np.arange(20.)+1e-6)
|
447
|
+
|
448
|
+
# Generated in R
|
449
|
+
# options(digits=16)
|
450
|
+
# ncp <- seq(0, 19) + 1e-6
|
451
|
+
# print(qchisq(0.999999, df = 2, ncp = ncp))
|
452
|
+
res_exp = [27.63103493142305, 35.25728589950540, 39.97396073236288,
|
453
|
+
43.88033702110538, 47.35206403482798, 50.54112500166103,
|
454
|
+
53.52720257322766, 56.35830042867810, 59.06600769498512,
|
455
|
+
61.67243118946381, 64.19376191277179, 66.64228141346548,
|
456
|
+
69.02756927200180, 71.35726934749408, 73.63759723904816,
|
457
|
+
75.87368842650227, 78.06984431185720, 80.22971052389806,
|
458
|
+
82.35640899964173, 84.45263768373256]
|
459
|
+
assert_allclose(res, res_exp)
|
460
|
+
|
461
|
+
|
462
|
+
def test_nctdtrinc_gh19896():
|
463
|
+
# test that gh-19896 is resolved.
|
464
|
+
# Compared to SciPy 1.11 results from Fortran code.
|
465
|
+
dfarr = [0.001, 0.98, 9.8, 98, 980, 10000, 98, 9.8, 0.98, 0.001]
|
466
|
+
parr = [0.001, 0.1, 0.3, 0.8, 0.999, 0.001, 0.1, 0.3, 0.8, 0.999]
|
467
|
+
tarr = [0.0015, 0.15, 1.5, 15, 300, 0.0015, 0.15, 1.5, 15, 300]
|
468
|
+
desired = [3.090232306168629, 1.406141304556198, 2.014225177124157,
|
469
|
+
13.727067118283456, 278.9765683871208, 3.090232306168629,
|
470
|
+
1.4312427877936222, 2.014225177124157, 3.712743137978295,
|
471
|
+
-3.086951096691082]
|
472
|
+
actual = sp.nctdtrinc(dfarr, parr, tarr)
|
473
|
+
assert_allclose(actual, desired, rtol=5e-12, atol=0.0)
|
474
|
+
|
475
|
+
|
476
|
+
def test_stdtr_stdtrit_neg_inf():
|
477
|
+
# -inf was treated as +inf and values from the normal were returned
|
478
|
+
assert np.all(np.isnan(sp.stdtr(-np.inf, [-np.inf, -1.0, 0.0, 1.0, np.inf])))
|
479
|
+
assert np.all(np.isnan(sp.stdtrit(-np.inf, [0.0, 0.25, 0.5, 0.75, 1.0])))
|
480
|
+
|
481
|
+
|
482
|
+
def test_bdtrik_nbdtrik_inf():
|
483
|
+
y = np.array(
|
484
|
+
[np.nan,-np.inf,-10.0, -1.0, 0.0, .00001, .5, 0.9999, 1.0, 10.0, np.inf])
|
485
|
+
y = y[:,None]
|
486
|
+
p = np.atleast_2d(
|
487
|
+
[np.nan, -np.inf, -10.0, -1.0, 0.0, .00001, .5, 1.0, np.inf])
|
488
|
+
assert np.all(np.isnan(sp.bdtrik(y, np.inf, p)))
|
489
|
+
assert np.all(np.isnan(sp.nbdtrik(y, np.inf, p)))
|
490
|
+
|
491
|
+
|
492
|
+
@pytest.mark.parametrize(
|
493
|
+
"dfn,dfd,nc,f,expected_cdf",
|
494
|
+
[[100.0, 0.1, 0.1, 100.0, 0.29787396410092676],
|
495
|
+
[100.0, 100.0, 0.01, 0.1, 4.4344737598690424e-26],
|
496
|
+
[100.0, 0.01, 0.1, 0.01, 0.002848616633080384],
|
497
|
+
[10.0, 0.01, 1.0, 0.1, 0.012339557729057956],
|
498
|
+
[100.0, 100.0, 0.01, 0.01, 1.8926477420964936e-72],
|
499
|
+
[1.0, 100.0, 100.0, 0.1, 1.7925940526821304e-22],
|
500
|
+
[1.0, 0.01, 100.0, 10.0, 0.012334711965024968],
|
501
|
+
[1.0, 0.01, 10.0, 0.01, 0.00021944525290299],
|
502
|
+
[10.0, 1.0, 0.1, 100.0, 0.9219345555070705],
|
503
|
+
[0.1, 0.1, 1.0, 1.0, 0.3136335813423239],
|
504
|
+
[100.0, 100.0, 0.1, 10.0, 1.0],
|
505
|
+
[1.0, 0.1, 100.0, 10.0, 0.02926064279680897]]
|
506
|
+
)
|
507
|
+
def test_ncfdtr_ncfdtri(dfn, dfd, nc, f, expected_cdf):
|
508
|
+
# Reference values computed with mpmath with the following script
|
509
|
+
#
|
510
|
+
# import numpy as np
|
511
|
+
#
|
512
|
+
# from mpmath import mp
|
513
|
+
# from scipy.special import ncfdtr
|
514
|
+
#
|
515
|
+
# mp.dps = 100
|
516
|
+
#
|
517
|
+
# def mp_ncfdtr(dfn, dfd, nc, f):
|
518
|
+
# # Uses formula 26.2.20 from Abramowitz and Stegun.
|
519
|
+
# dfn, dfd, nc, f = map(mp.mpf, (dfn, dfd, nc, f))
|
520
|
+
# def term(j):
|
521
|
+
# result = mp.exp(-nc/2)*(nc/2)**j / mp.factorial(j)
|
522
|
+
# result *= mp.betainc(
|
523
|
+
# dfn/2 + j, dfd/2, 0, f*dfn/(f*dfn + dfd), regularized=True
|
524
|
+
# )
|
525
|
+
# return result
|
526
|
+
# result = mp.nsum(term, [0, mp.inf])
|
527
|
+
# return float(result)
|
528
|
+
#
|
529
|
+
# dfn = np.logspace(-2, 2, 5)
|
530
|
+
# dfd = np.logspace(-2, 2, 5)
|
531
|
+
# nc = np.logspace(-2, 2, 5)
|
532
|
+
# f = np.logspace(-2, 2, 5)
|
533
|
+
#
|
534
|
+
# dfn, dfd, nc, f = np.meshgrid(dfn, dfd, nc, f)
|
535
|
+
# dfn, dfd, nc, f = map(np.ravel, (dfn, dfd, nc, f))
|
536
|
+
#
|
537
|
+
# cases = []
|
538
|
+
# re = []
|
539
|
+
# for x0, x1, x2, x3 in zip(*(dfn, dfd, nc, f)):
|
540
|
+
# observed = ncfdtr(x0, x1, x2, x3)
|
541
|
+
# expected = mp_ncfdtr(x0, x1, x2, x3)
|
542
|
+
# cases.append((x0, x1, x2, x3, expected))
|
543
|
+
# re.append((abs(expected - observed)/abs(expected)))
|
544
|
+
#
|
545
|
+
# assert np.max(re) < 1e-13
|
546
|
+
#
|
547
|
+
# rng = np.random.default_rng(1234)
|
548
|
+
# sample_idx = rng.choice(len(re), replace=False, size=12)
|
549
|
+
# cases = np.array(cases)[sample_idx].tolist()
|
550
|
+
assert_allclose(sp.ncfdtr(dfn, dfd, nc, f), expected_cdf, rtol=1e-13, atol=0)
|
551
|
+
# testing tails where the CDF reaches 0 or 1 does not make sense for inverses
|
552
|
+
# of a CDF as they are not bijective in these regions
|
553
|
+
if 0 < expected_cdf < 1:
|
554
|
+
assert_allclose(sp.ncfdtri(dfn, dfd, nc, expected_cdf), f, rtol=5e-11)
|
555
|
+
|
556
|
+
@pytest.mark.parametrize(
|
557
|
+
"args",
|
558
|
+
[(-1.0, 0.1, 0.1, 0.5),
|
559
|
+
(1, -1.0, 0.1, 0.5),
|
560
|
+
(1, 1, -1.0, 0.5),
|
561
|
+
(1, 1, 1, 100),
|
562
|
+
(1, 1, 1, -1)]
|
563
|
+
)
|
564
|
+
def test_ncfdtri_domain_error(args):
|
565
|
+
with sp.errstate(domain="raise"):
|
566
|
+
with pytest.raises(sp.SpecialFunctionError, match="domain"):
|
567
|
+
sp.ncfdtri(*args)
|
568
|
+
|
569
|
+
class TestNoncentralTFunctions:
|
570
|
+
|
571
|
+
# Reference values computed with mpmath with the following script
|
572
|
+
# Formula from:
|
573
|
+
# Lenth, Russell V (1989). "Algorithm AS 243: Cumulative Distribution Function
|
574
|
+
# of the Non-central t Distribution". Journal of the Royal Statistical Society,
|
575
|
+
# Series C. 38 (1): 185-189
|
576
|
+
#
|
577
|
+
# Warning: may take a long time to run
|
578
|
+
#
|
579
|
+
# from mpmath import mp
|
580
|
+
# mp.dps = 400
|
581
|
+
|
582
|
+
# def nct_cdf(df, nc, x):
|
583
|
+
# df, nc, x = map(mp.mpf, (df, nc, x))
|
584
|
+
|
585
|
+
# def f(df, nc, x):
|
586
|
+
# phi = mp.ncdf(-nc)
|
587
|
+
# y = x * x / (x * x + df)
|
588
|
+
# constant = mp.exp(-nc * nc / 2.)
|
589
|
+
# def term(j):
|
590
|
+
# intermediate = constant * (nc *nc / 2.)**j
|
591
|
+
# p = intermediate/mp.factorial(j)
|
592
|
+
# q = nc / (mp.sqrt(2.) * mp.gamma(j + 1.5)) * intermediate
|
593
|
+
# first_beta_term = mp.betainc(j + 0.5, df/2., x2=y,
|
594
|
+
# regularized=True)
|
595
|
+
# second_beta_term = mp.betainc(j + mp.one, df/2., x2=y,
|
596
|
+
# regularized=True)
|
597
|
+
# return p * first_beta_term + q * second_beta_term
|
598
|
+
|
599
|
+
# sum_term = mp.nsum(term, [0, mp.inf])
|
600
|
+
# f = phi + 0.5 * sum_term
|
601
|
+
# return f
|
602
|
+
|
603
|
+
# if x >= 0:
|
604
|
+
# result = f(df, nc, x)
|
605
|
+
# else:
|
606
|
+
# result = mp.one - f(df, -nc, x)
|
607
|
+
# return float(result)
|
608
|
+
|
609
|
+
@pytest.mark.parametrize("df, nc, x, expected_cdf", [
|
610
|
+
(0.98, -3.8, 0.0015, 0.9999279987514815),
|
611
|
+
(0.98, -3.8, 0.15, 0.9999528361700505),
|
612
|
+
(0.98, -3.8, 1.5, 0.9999908823016942),
|
613
|
+
(0.98, -3.8, 15, 0.9999990264591945),
|
614
|
+
(0.98, 0.38, 0.0015, 0.35241533122693),
|
615
|
+
(0.98, 0.38, 0.15, 0.39749697267146983),
|
616
|
+
(0.98, 0.38, 1.5, 0.716862963488558),
|
617
|
+
(0.98, 0.38, 15, 0.9656246449257494),
|
618
|
+
(0.98, 3.8, 0.0015, 7.26973354942293e-05),
|
619
|
+
(0.98, 3.8, 0.15, 0.00012416481147589105),
|
620
|
+
(0.98, 3.8, 1.5, 0.035388035775454095),
|
621
|
+
(0.98, 3.8, 15, 0.7954826975430583),
|
622
|
+
(0.98, 38, 0.0015, 3.02106943e-316),
|
623
|
+
(0.98, 38, 0.15, 6.069970616996603e-309),
|
624
|
+
(0.98, 38, 1.5, 2.591995360483094e-97),
|
625
|
+
(0.98, 38, 15, 0.011927265886910935),
|
626
|
+
(9.8, -3.8, 0.0015, 0.9999280776192786),
|
627
|
+
(9.8, -3.8, 0.15, 0.9999599410685442),
|
628
|
+
(9.8, -3.8, 1.5, 0.9999997432394788),
|
629
|
+
(9.8, -3.8, 15, 0.9999999999999984),
|
630
|
+
(9.8, 0.38, 0.0015, 0.3525155979107491),
|
631
|
+
(9.8, 0.38, 0.15, 0.40763120140379194),
|
632
|
+
(9.8, 0.38, 1.5, 0.8476794017024651),
|
633
|
+
(9.8, 0.38, 15, 0.9999999297116268),
|
634
|
+
(9.8, 3.8, 0.0015, 7.277620328149153e-05),
|
635
|
+
(9.8, 3.8, 0.15, 0.00013024802220900652),
|
636
|
+
(9.8, 3.8, 1.5, 0.013477432800072933),
|
637
|
+
(9.8, 3.8, 15, 0.999850151230648),
|
638
|
+
(9.8, 38, 0.0015, 3.05066095e-316),
|
639
|
+
(9.8, 38, 0.15, 1.79065514676e-313),
|
640
|
+
(9.8, 38, 1.5, 2.0935940165900746e-249),
|
641
|
+
(9.8, 38, 15, 2.252076291604796e-09),
|
642
|
+
(98, -3.8, 0.0015, 0.9999280875149109),
|
643
|
+
(98, -3.8, 0.15, 0.9999608250170452),
|
644
|
+
(98, -3.8, 1.5, 0.9999999304757682),
|
645
|
+
(98, -3.8, 15, 1.0),
|
646
|
+
(98, 0.38, 0.0015, 0.35252817848596313),
|
647
|
+
(98, 0.38, 0.15, 0.40890253001794846),
|
648
|
+
(98, 0.38, 1.5, 0.8664672830006552),
|
649
|
+
(98, 0.38, 15, 1.0),
|
650
|
+
(98, 3.8, 0.0015, 7.278609891281275e-05),
|
651
|
+
(98, 3.8, 0.15, 0.0001310318674827004),
|
652
|
+
(98, 3.8, 1.5, 0.010990879189991727),
|
653
|
+
(98, 3.8, 15, 0.9999999999999989),
|
654
|
+
(98, 38, 0.0015, 3.05437385e-316),
|
655
|
+
(98, 38, 0.15, 9.1668336166e-314),
|
656
|
+
(98, 38, 1.5, 1.8085884236563926e-288),
|
657
|
+
(98, 38, 15, 2.7740532792035907e-50),
|
658
|
+
(980, -3.8, 0.0015, 0.9999280885188965),
|
659
|
+
(980, -3.8, 0.15, 0.9999609144559273),
|
660
|
+
(980, -3.8, 1.5, 0.9999999410050979),
|
661
|
+
(980, -3.8, 15, 1.0),
|
662
|
+
(980, 0.38, 0.0015, 0.3525294548792812),
|
663
|
+
(980, 0.38, 0.15, 0.4090315324657382),
|
664
|
+
(980, 0.38, 1.5, 0.8684247068517293),
|
665
|
+
(980, 0.38, 15, 1.0),
|
666
|
+
(980, 3.8, 0.0015, 7.278710289828983e-05),
|
667
|
+
(980, 3.8, 0.15, 0.00013111131667906573),
|
668
|
+
(980, 3.8, 1.5, 0.010750678886113882),
|
669
|
+
(980, 3.8, 15, 1.0),
|
670
|
+
(980, 38, 0.0015, 3.0547506e-316),
|
671
|
+
(980, 38, 0.15, 8.6191646313e-314),
|
672
|
+
pytest.param(980, 38, 1.5, 1.1824454111413493e-291,
|
673
|
+
marks=pytest.mark.xfail(
|
674
|
+
reason="Bug in underlying Boost math implementation")),
|
675
|
+
(980, 38, 15, 5.407535300713606e-105)
|
676
|
+
])
|
677
|
+
def test_gh19896(self, df, nc, x, expected_cdf):
|
678
|
+
# test that gh-19896 is resolved.
|
679
|
+
# Originally this was a regression test that used the old Fortran results
|
680
|
+
# as a reference. The Fortran results were not accurate, so the reference
|
681
|
+
# values were recomputed with mpmath.
|
682
|
+
nctdtr_result = sp.nctdtr(df, nc, x)
|
683
|
+
assert_allclose(nctdtr_result, expected_cdf, rtol=1e-13, atol=1e-303)
|
684
|
+
|
685
|
+
def test_nctdtr_gh8344(self):
|
686
|
+
# test that gh-8344 is resolved.
|
687
|
+
df, nc, x = 3000, 3, 0.1
|
688
|
+
expected = 0.0018657780826323328
|
689
|
+
assert_allclose(sp.nctdtr(df, nc, x), expected, rtol=1e-14)
|
690
|
+
|
691
|
+
@pytest.mark.parametrize(
|
692
|
+
"df, nc, x, expected, rtol",
|
693
|
+
[[3., 5., -2., 1.5645373999149622e-09, 5e-9],
|
694
|
+
[1000., 10., 1., 1.1493552133826623e-19, 1e-13],
|
695
|
+
[1e-5, -6., 2., 0.9999999990135003, 1e-13],
|
696
|
+
[10., 20., 0.15, 6.426530505957303e-88, 1e-13],
|
697
|
+
[1., 1., np.inf, 1.0, 0.0],
|
698
|
+
[1., 1., -np.inf, 0.0, 0.0]
|
699
|
+
]
|
700
|
+
)
|
701
|
+
def test_nctdtr_accuracy(self, df, nc, x, expected, rtol):
|
702
|
+
assert_allclose(sp.nctdtr(df, nc, x), expected, rtol=rtol)
|
703
|
+
|
704
|
+
@pytest.mark.parametrize("df, nc, x, expected_cdf", [
|
705
|
+
(0.98, 38, 1.5, 2.591995360483094e-97),
|
706
|
+
(3000, 3, 0.1, 0.0018657780826323328),
|
707
|
+
(0.98, -3.8, 15, 0.9999990264591945),
|
708
|
+
(9.8, 38, 15, 2.252076291604796e-09),
|
709
|
+
|
710
|
+
])
|
711
|
+
def test_nctdtrit(self, df, nc, x, expected_cdf):
|
712
|
+
assert_allclose(sp.nctdtrit(df, nc, expected_cdf), x, rtol=1e-10)
|