psyclaw 0.27.22 → 0.28.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1048) hide show
  1. package/README.md +11 -5
  2. package/dist/apps/panel/index.html +2 -2
  3. package/dist/src/adapters/pi/extension.js +225 -92
  4. package/dist/src/adapters/pi/extension.js.map +1 -1
  5. package/dist/src/agents/import.js +44 -32
  6. package/dist/src/agents/import.js.map +1 -1
  7. package/dist/src/analysis/hooks.d.ts +1 -0
  8. package/dist/src/analysis/hooks.js +20 -1
  9. package/dist/src/analysis/hooks.js.map +1 -1
  10. package/dist/src/ars/bridge.d.ts +20 -0
  11. package/dist/src/ars/bridge.js +132 -0
  12. package/dist/src/ars/bridge.js.map +1 -0
  13. package/dist/src/ars/contracts.d.ts +55 -0
  14. package/dist/src/ars/contracts.js +2 -0
  15. package/dist/src/ars/contracts.js.map +1 -0
  16. package/dist/src/ars/panel-plan.d.ts +4 -0
  17. package/dist/src/ars/panel-plan.js +11 -0
  18. package/dist/src/ars/panel-plan.js.map +1 -0
  19. package/dist/src/ars/pi-panel-executor.d.ts +30 -0
  20. package/dist/src/ars/pi-panel-executor.js +140 -0
  21. package/dist/src/ars/pi-panel-executor.js.map +1 -0
  22. package/dist/src/ars/profile.d.ts +36 -0
  23. package/dist/src/ars/profile.js +119 -0
  24. package/dist/src/ars/profile.js.map +1 -0
  25. package/dist/src/ars/re-review.d.ts +22 -0
  26. package/dist/src/ars/re-review.js +172 -0
  27. package/dist/src/ars/re-review.js.map +1 -0
  28. package/dist/src/branding.d.ts +2 -4
  29. package/dist/src/branding.js +3 -5
  30. package/dist/src/branding.js.map +1 -1
  31. package/dist/src/bundled-tools.d.ts +3 -0
  32. package/dist/src/bundled-tools.js +21 -0
  33. package/dist/src/bundled-tools.js.map +1 -0
  34. package/dist/src/chat.js +6 -5
  35. package/dist/src/chat.js.map +1 -1
  36. package/dist/src/creation/contracts.d.ts +38 -0
  37. package/dist/src/creation/contracts.js +2 -0
  38. package/dist/src/creation/contracts.js.map +1 -0
  39. package/dist/src/creation/service.d.ts +7 -0
  40. package/dist/src/creation/service.js +196 -0
  41. package/dist/src/creation/service.js.map +1 -0
  42. package/dist/src/index.d.ts +10 -0
  43. package/dist/src/index.js +10 -0
  44. package/dist/src/index.js.map +1 -1
  45. package/dist/src/install/installer.js +32 -10
  46. package/dist/src/install/installer.js.map +1 -1
  47. package/dist/src/orchestration/personas.d.ts +15 -0
  48. package/dist/src/orchestration/personas.js +51 -0
  49. package/dist/src/orchestration/personas.js.map +1 -0
  50. package/dist/src/orchestration/pi-executor.d.ts +1 -0
  51. package/dist/src/orchestration/pi-executor.js +1 -1
  52. package/dist/src/orchestration/pi-executor.js.map +1 -1
  53. package/dist/src/panel/extension.js +29 -8
  54. package/dist/src/panel/extension.js.map +1 -1
  55. package/dist/src/panel/server.js +14 -5
  56. package/dist/src/panel/server.js.map +1 -1
  57. package/dist/src/project/paths.d.ts +3 -0
  58. package/dist/src/project/paths.js +7 -0
  59. package/dist/src/project/paths.js.map +1 -1
  60. package/dist/src/rules/user-rules.d.ts +8 -0
  61. package/dist/src/rules/user-rules.js +36 -0
  62. package/dist/src/rules/user-rules.js.map +1 -0
  63. package/dist/src/skills/contracts.d.ts +4 -4
  64. package/dist/src/skills/recommended.js +1 -1
  65. package/dist/src/skills/registry.js +49 -28
  66. package/dist/src/skills/registry.js.map +1 -1
  67. package/dist/src/style/cli-ui.js +0 -1
  68. package/dist/src/style/cli-ui.js.map +1 -1
  69. package/package.json +14 -3
  70. package/scripts/rebrand-pi.mjs +6 -0
  71. package/skills/recommended/catalog.json +2 -11
  72. package/vendor/ars/.claude/CLAUDE.md +371 -0
  73. package/vendor/ars/.command-invariants.toml +24 -0
  74. package/vendor/ars/CITATION.cff +35 -0
  75. package/vendor/ars/LICENSE +417 -0
  76. package/vendor/ars/MODE_REGISTRY.md +76 -0
  77. package/vendor/ars/NOTICE.md +26 -0
  78. package/vendor/ars/POSITIONING.md +99 -0
  79. package/vendor/ars/PSYCLAW_SOURCE.json +10 -0
  80. package/vendor/ars/README.md +751 -0
  81. package/vendor/ars/SECURITY.md +52 -0
  82. package/vendor/ars/THIRD_PARTY.md +70 -0
  83. package/vendor/ars/academic-paper/SKILL.md +542 -0
  84. package/vendor/ars/academic-paper/agents/abstract_bilingual_agent.md +171 -0
  85. package/vendor/ars/academic-paper/agents/argument_builder_agent.md +276 -0
  86. package/vendor/ars/academic-paper/agents/citation_compliance_agent.md +422 -0
  87. package/vendor/ars/academic-paper/agents/draft_writer_agent.md +656 -0
  88. package/vendor/ars/academic-paper/agents/formatter_agent.md +999 -0
  89. package/vendor/ars/academic-paper/agents/intake_agent.md +393 -0
  90. package/vendor/ars/academic-paper/agents/literature_strategist_agent.md +626 -0
  91. package/vendor/ars/academic-paper/agents/peer_reviewer_agent.md +516 -0
  92. package/vendor/ars/academic-paper/agents/revision_coach_agent.md +334 -0
  93. package/vendor/ars/academic-paper/agents/socratic_mentor_agent.md +527 -0
  94. package/vendor/ars/academic-paper/agents/structure_architect_agent.md +401 -0
  95. package/vendor/ars/academic-paper/agents/visualization_agent.md +441 -0
  96. package/vendor/ars/academic-paper/examples/chinese_paper_example.md +278 -0
  97. package/vendor/ars/academic-paper/examples/clinical_citation_verification_checklist.md +95 -0
  98. package/vendor/ars/academic-paper/examples/clinical_epistemic_status_example.md +100 -0
  99. package/vendor/ars/academic-paper/examples/commitment_ledger_example.md +147 -0
  100. package/vendor/ars/academic-paper/examples/imrad_hei_example.md +234 -0
  101. package/vendor/ars/academic-paper/examples/literature_review_example.md +260 -0
  102. package/vendor/ars/academic-paper/examples/plan_mode_guided_writing.md +600 -0
  103. package/vendor/ars/academic-paper/examples/revision_mode_example.md +344 -0
  104. package/vendor/ars/academic-paper/examples/revision_recovery_example.md +506 -0
  105. package/vendor/ars/academic-paper/examples/version_family_reconciliation_example.md +89 -0
  106. package/vendor/ars/academic-paper/references/abstract_writing_guide.md +169 -0
  107. package/vendor/ars/academic-paper/references/academic_writing_style.md +188 -0
  108. package/vendor/ars/academic-paper/references/anti_leakage_protocol.md +83 -0
  109. package/vendor/ars/academic-paper/references/apa7_chinese_citation_guide.md +364 -0
  110. package/vendor/ars/academic-paper/references/apa7_extended_guide.md +198 -0
  111. package/vendor/ars/academic-paper/references/changelog.md +11 -0
  112. package/vendor/ars/academic-paper/references/citation_format_switcher.md +228 -0
  113. package/vendor/ars/academic-paper/references/committee_correspondence_protocol.md +158 -0
  114. package/vendor/ars/academic-paper/references/credit_authorship_guide.md +308 -0
  115. package/vendor/ars/academic-paper/references/disclosure_mode_protocol.md +478 -0
  116. package/vendor/ars/academic-paper/references/domain_evidence_profiles.md +38 -0
  117. package/vendor/ars/academic-paper/references/failure_paths.md +349 -0
  118. package/vendor/ars/academic-paper/references/funding_statement_guide.md +319 -0
  119. package/vendor/ars/academic-paper/references/hei_domain_glossary.md +169 -0
  120. package/vendor/ars/academic-paper/references/intro_title_rhetoric_guide.md +114 -0
  121. package/vendor/ars/academic-paper/references/journal_submission_guide.md +249 -0
  122. package/vendor/ars/academic-paper/references/latex_template_reference.md +378 -0
  123. package/vendor/ars/academic-paper/references/mode_selection_guide.md +378 -0
  124. package/vendor/ars/academic-paper/references/paper_structure_patterns.md +330 -0
  125. package/vendor/ars/academic-paper/references/plan_mode_protocol.md +112 -0
  126. package/vendor/ars/academic-paper/references/policy_anchor_disclosure_protocol.md +200 -0
  127. package/vendor/ars/academic-paper/references/policy_anchor_table.md +157 -0
  128. package/vendor/ars/academic-paper/references/revision_patch_protocol.md +173 -0
  129. package/vendor/ars/academic-paper/references/statistical_visualization_standards.md +750 -0
  130. package/vendor/ars/academic-paper/references/venue_disclosure_policies.md +259 -0
  131. package/vendor/ars/academic-paper/references/vlm_figure_verification.md +126 -0
  132. package/vendor/ars/academic-paper/references/workflow_phase_details.md +135 -0
  133. package/vendor/ars/academic-paper/references/writing_judgment_framework.md +59 -0
  134. package/vendor/ars/academic-paper/references/writing_quality_check.md +173 -0
  135. package/vendor/ars/academic-paper/templates/bilingual_abstract_template.md +78 -0
  136. package/vendor/ars/academic-paper/templates/case_study_template.md +129 -0
  137. package/vendor/ars/academic-paper/templates/conference_paper_template.md +108 -0
  138. package/vendor/ars/academic-paper/templates/credit_statement_template.md +132 -0
  139. package/vendor/ars/academic-paper/templates/funding_statement_template.md +290 -0
  140. package/vendor/ars/academic-paper/templates/imrad_template.md +183 -0
  141. package/vendor/ars/academic-paper/templates/latex_article_template.tex +199 -0
  142. package/vendor/ars/academic-paper/templates/literature_review_template.md +135 -0
  143. package/vendor/ars/academic-paper/templates/policy_brief_template.md +139 -0
  144. package/vendor/ars/academic-paper/templates/revision_tracking_template.md +199 -0
  145. package/vendor/ars/academic-paper/templates/theoretical_paper_template.md +119 -0
  146. package/vendor/ars/academic-paper-reviewer/SKILL.md +491 -0
  147. package/vendor/ars/academic-paper-reviewer/agents/devils_advocate_reviewer_agent.md +443 -0
  148. package/vendor/ars/academic-paper-reviewer/agents/domain_reviewer_agent.md +412 -0
  149. package/vendor/ars/academic-paper-reviewer/agents/editorial_synthesizer_agent.md +478 -0
  150. package/vendor/ars/academic-paper-reviewer/agents/eic_agent.md +339 -0
  151. package/vendor/ars/academic-paper-reviewer/agents/field_analyst_agent.md +221 -0
  152. package/vendor/ars/academic-paper-reviewer/agents/methodology_reviewer_agent.md +449 -0
  153. package/vendor/ars/academic-paper-reviewer/agents/perspective_reviewer_agent.md +427 -0
  154. package/vendor/ars/academic-paper-reviewer/examples/hei_paper_review_example.md +391 -0
  155. package/vendor/ars/academic-paper-reviewer/examples/interdisciplinary_review_example.md +299 -0
  156. package/vendor/ars/academic-paper-reviewer/examples/subclaim_decomposition_example.md +80 -0
  157. package/vendor/ars/academic-paper-reviewer/references/calibration_mode_protocol.md +256 -0
  158. package/vendor/ars/academic-paper-reviewer/references/changelog.md +10 -0
  159. package/vendor/ars/academic-paper-reviewer/references/editorial_decision_standards.md +236 -0
  160. package/vendor/ars/academic-paper-reviewer/references/guided_mode_protocol.md +34 -0
  161. package/vendor/ars/academic-paper-reviewer/references/integration_guide.md +15 -0
  162. package/vendor/ars/academic-paper-reviewer/references/quality_rubrics.md +84 -0
  163. package/vendor/ars/academic-paper-reviewer/references/re_review_mode_protocol.md +340 -0
  164. package/vendor/ars/academic-paper-reviewer/references/review_criteria_framework.md +98 -0
  165. package/vendor/ars/academic-paper-reviewer/references/review_panel_provenance_protocol.md +197 -0
  166. package/vendor/ars/academic-paper-reviewer/references/review_quality_thinking.md +58 -0
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  169. package/vendor/ars/academic-paper-reviewer/references/statistical_reporting_standards.md +505 -0
  170. package/vendor/ars/academic-paper-reviewer/references/top_journals_by_field.md +206 -0
  171. package/vendor/ars/academic-paper-reviewer/templates/editorial_decision_template.md +235 -0
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  175. package/vendor/ars/academic-pipeline/agents/claim_ref_alignment_audit_agent.md +382 -0
  176. package/vendor/ars/academic-pipeline/agents/collaboration_depth_agent.md +164 -0
  177. package/vendor/ars/academic-pipeline/agents/integrity_verification_agent.md +870 -0
  178. package/vendor/ars/academic-pipeline/agents/pipeline_orchestrator_agent.md +1379 -0
  179. package/vendor/ars/academic-pipeline/agents/state_tracker_agent.md +622 -0
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  181. package/vendor/ars/academic-pipeline/examples/integrity_failure_recovery.md +389 -0
  182. package/vendor/ars/academic-pipeline/examples/mid_entry_example.md +414 -0
  183. package/vendor/ars/academic-pipeline/references/adapters/.gitkeep +0 -0
  184. package/vendor/ars/academic-pipeline/references/adapters/overview.md +153 -0
  185. package/vendor/ars/academic-pipeline/references/ai_research_failure_modes.md +185 -0
  186. package/vendor/ars/academic-pipeline/references/changelog.md +14 -0
  187. package/vendor/ars/academic-pipeline/references/claim_audit_calibration_protocol.md +175 -0
  188. package/vendor/ars/academic-pipeline/references/claim_verification_protocol.md +282 -0
  189. package/vendor/ars/academic-pipeline/references/external_review_protocol.md +131 -0
  190. package/vendor/ars/academic-pipeline/references/integrity_review_protocol.md +110 -0
  191. package/vendor/ars/academic-pipeline/references/literature_corpus_consumers.md +193 -0
  192. package/vendor/ars/academic-pipeline/references/mode_advisor.md +135 -0
  193. package/vendor/ars/academic-pipeline/references/passport_as_reset_boundary.md +132 -0
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  204. package/vendor/ars/agents/report_compiler_agent.md +341 -0
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  207. package/vendor/ars/commands/ars-3w.md +10 -0
  208. package/vendor/ars/commands/ars-abstract.md +10 -0
  209. package/vendor/ars/commands/ars-cache-invalidate.md +20 -0
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  213. package/vendor/ars/commands/ars-full.md +9 -0
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@@ -0,0 +1,282 @@
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+ # Research Ethics Checklist — AI-Assisted Research
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+
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+ ## Purpose
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+ Comprehensive ethics checklist for AI-assisted academic research. Used by the ethics_review_agent.
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+
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+ ## 1. AI Disclosure
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+
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+ ### Mandatory Disclosure Elements
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+ - [ ] AI tools used are named (e.g., "Claude," "GPT-4," "Gemini")
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+ - [ ] Scope of AI involvement specified:
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+ - [ ] Literature search assistance
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+ - [ ] Source screening
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+ - [ ] Evidence synthesis
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+ - [ ] Draft writing
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+ - [ ] Editing/revision
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+ - [ ] Data analysis
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+ - [ ] Translation
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+ - [ ] Human oversight described (who reviewed what, at which stages)
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+ - [ ] AI limitations acknowledged (potential hallucination, knowledge cutoff, etc.)
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+ - [ ] AI version/date noted (for reproducibility)
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+
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+ ### Disclosure Statement Template
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+ ```
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+ AI Disclosure: This research was conducted with assistance from [AI Tool Name]
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+ (version/date). AI was used for [specific tasks]. All findings were verified
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+ against cited sources by [human role]. The research team maintains full
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+ responsibility for the accuracy and interpretation of all content.
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+ ```
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+
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+ ### Where to Place Disclosure
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+ - In the methodology section (detailed)
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+ - In the abstract or author note (brief)
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+ - In footnotes for specific AI-generated analyses
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+
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+ ## 2. Attribution Integrity
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+
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+ ### Citation Ethics
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+ - [ ] Every factual claim has at least one supporting citation
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+ - [ ] No fabricated or hallucinated references
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+ - Verification: Spot-check minimum 20% of references for existence
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+ - Cross-check DOIs, publication years, author names
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+ - [ ] Paraphrasing is genuine (not just rearranging words)
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+ - [ ] Direct quotes are exact and attributed
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+ - [ ] Ideas are attributed to original authors, not intermediary sources
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+ - [ ] Self-citation is proportionate (not excessive or exclusionary)
46
+
47
+ ### AI-Specific Attribution Risks
48
+ | Risk | Description | Mitigation |
49
+ |------|-------------|-----------|
50
+ | Hallucinated references | AI generates plausible but non-existent citations | Verify every reference against database |
51
+ | Merged citations | AI combines details from multiple sources | Cross-check each citation element |
52
+ | Incorrect authors | AI assigns wrong authors to works | Verify author names against actual publications |
53
+ | Wrong year | AI uses incorrect publication year | Cross-check against database records |
54
+ | Ghost citations | References listed but never cited in text | Audit reference list against in-text citations |
55
+
56
+ ## 3. Dual-Use Assessment
57
+
58
+ **Screen on concrete specifics, never on subject matter.** A sensitive, political, or institution-critical *topic* is not a dual-use trigger. Public-interest research — documenting institutional abuses, exposing surveillance practices, holding power to account — is expected to address harmful subject matter and must not be flagged for the topic alone. A finding triggers dual-use only when the work itself supplies **specific operational detail** that materially lowers the barrier to harm. Studying surveillance is fine; shipping a step-by-step deployment recipe is the trigger.
59
+
60
+ ### Screening Questions
61
+ Each asks whether the **content of this work**, not its topic, supplies the specific:
62
+ 1. Does the work provide concrete operational detail that would let a reader **carry out** harm against individuals or communities (beyond describing that the harm exists)?
63
+ 2. Does it disclose a **specific, currently-exploitable** vulnerability together with enough detail to exploit it (vs. naming that vulnerabilities exist)?
64
+ 3. Does it provide a **usable method** to build surveillance or control mechanisms (vs. analyzing or critiquing them)?
65
+ 4. Does it contain **weaponizable specifics** — a recipe, design, or procedure — rather than discussion of weaponization risk?
66
+ 5. Does it supply a **concrete means** to discriminate against a group (vs. documenting that discrimination occurs)?
67
+
68
+ If the answer rests on the topic being sensitive rather than on specific enabling detail in the text, the level is None.
69
+
70
+ ### Risk Levels and Responses
71
+
72
+ This assessment is **advisory** — it routes to a Responsible Use Statement and never to a hard block. (Hard blocks are reserved for integrity violations; see `agents/ethics_review_agent.md` Blocking Conditions.) Escalation rests on concrete enabling specifics, not subject matter.
73
+
74
+ | Level | Action Required |
75
+ |-------|----------------|
76
+ | None | No additional action |
77
+ | Low | Brief note in limitations |
78
+ | Moderate | Responsible Use statement in report |
79
+ | High | Prominent warning + limited distribution recommendation |
80
+ | Critical | Responsible Use statement + recommend institutional ethics review before publication (advisory — does not auto-block; a human, not the agent, adjudicates a Critical flag) |
81
+
82
+ ### Responsible Use Statement Template
83
+ ```
84
+ Responsible Use: This research is intended for [stated purpose]. The authors
85
+ acknowledge that findings related to [sensitive area] could potentially be
86
+ applied in ways not intended by this research. Users of this research are
87
+ urged to consider the ethical implications of their applications and to
88
+ prioritize [specific ethical principle].
89
+ ```
90
+
91
+ ## 4. Fair Representation
92
+
93
+ ### Balanced Treatment Checklist
94
+ - [ ] Multiple perspectives on contested issues are presented
95
+ - [ ] Minority/dissenting viewpoints are not dismissed without engagement
96
+ - [ ] Subjects and communities are described accurately
97
+ - [ ] Language is respectful and non-stigmatizing
98
+ - [ ] Cultural context is acknowledged where relevant
99
+ - [ ] Power dynamics are considered (who is studied vs. who studies)
100
+ - [ ] Geographic and cultural diversity in sources
101
+
102
+ ### Sensitive Topics
103
+ - Indigenous knowledge: Identify and follow the specific community-governance
104
+ convention in scope; use OCAP (Ownership, Control, Access, Possession) only
105
+ where the relevant First Nations authority or community has adopted it
106
+ - Disability: Person-first language unless community prefers identity-first
107
+ - Gender/sexuality: Use inclusive, current terminology
108
+ - Race/ethnicity: Use preferred terminology of the communities discussed
109
+ - Socioeconomic status: Avoid deficit framing
110
+ - Mental health: Avoid stigmatizing language
111
+
112
+ ### Representation Audit Questions
113
+ 1. Whose voices are centered? Whose are missing?
114
+ 2. Are communities described on their own terms?
115
+ 3. Is there implicit bias in the framing?
116
+ 4. Would the subjects/communities recognize themselves in this description?
117
+
118
+ ## 5. Data Ethics
119
+
120
+ ### Data Source Ethics — Portable Integrity Planning
121
+
122
+ These are **planning and documentation conventions**, not legal conclusions.
123
+ Applicable law, licence interpretation, and institutional authorization remain
124
+ with the responsible authority.
125
+
126
+ - [ ] For each source, the asserted access/use basis and unresolved questions are documented
127
+ - [ ] Public data: Publication status, access terms, provenance, and licence are recorded
128
+ - [ ] Licensed data: Relevant licence terms and the team's intended use are recorded
129
+ - [ ] Scraped data: Site terms, robots instructions, collection method, and unresolved authority questions are recorded
130
+ - [ ] Personal data: Each candidate data-protection authority is recorded; no jurisdiction or legal basis is inferred
131
+ - [ ] Institutional data: The supplying institution's documented access status and conditions are recorded
132
+
133
+ ### Privacy Protection
134
+
135
+ The following are **portable technical planning prompts**, not a universal
136
+ privacy-law checklist:
137
+
138
+ - [ ] Direct identifiers, quasi-identifiers, platform metadata, and re-link keys are inventoried
139
+ - [ ] The asserted authority or institutional basis for collecting and processing identifiers is recorded; consent is not presumed to be the only or applicable basis
140
+ - [ ] Aggregation, masking, or other disclosure controls have been considered for small-N groups and identifiable institutions
141
+ - [ ] Access roles, recipients, security, retention, deletion, reuse, and incident handling are documented
142
+ - [ ] If the exact GDPR profile is selected, the trace points to the applicable bounded rows (`eu.gdpr.article-6.lawful-basis`, `eu.gdpr.article-9.special-category-research`, `eu.gdpr.article-13.direct-collection-information`, `eu.gdpr.article-14.indirect-collection-information`, and/or `eu.gdpr.article-89.1.research-safeguards`) rather than asserting a result
143
+
144
+ ### AI-Specific Data Concerns
145
+ - [ ] AI training data biases acknowledged
146
+ - [ ] AI knowledge cutoff date noted
147
+ - [ ] AI-generated data clearly labeled as such
148
+ - [ ] No circular citation (AI cites AI-generated content)
149
+
150
+ ## 6. Conflict of Interest
151
+
152
+ ### Types to Assess
153
+ - [ ] Financial: Funding source, consulting relationships
154
+ - [ ] Institutional: Author evaluating own institution
155
+ - [ ] Intellectual: Author defending own prior work
156
+ - [ ] Personal: Relationships with subjects/stakeholders
157
+ - [ ] Political: Government-funded research on government policy
158
+ - [ ] Commercial: Industry connections or product interests
159
+ - [ ] AI-specific: AI tool company influence on research design
160
+
161
+ ### Disclosure Requirement
162
+ Any identified conflict must be disclosed in the report, with an assessment of whether it could have influenced the findings.
163
+
164
+ ## 7. Reproducibility Ethics
165
+
166
+ ### Documentation Requirements
167
+ - [ ] Search strategies documented (databases, terms, dates)
168
+ - [ ] Inclusion/exclusion criteria documented
169
+ - [ ] Analytical methods described in replicable detail
170
+ - [ ] AI prompts/instructions documented (if relevant)
171
+ - [ ] Data processing steps documented
172
+ - [ ] Code/scripts shared (if applicable)
173
+
174
+ ### Reproducibility Statement Template
175
+ ```
176
+ Reproducibility: The search strategy, inclusion criteria, and analytical
177
+ methods used in this research are documented in [section/appendix]. The
178
+ AI-assisted components used [specific prompts/parameters]. Researchers
179
+ wishing to replicate or extend this work should note [relevant limitations
180
+ or conditions].
181
+ ```
182
+
183
+ ## 8. Human Subjects Ethics
184
+
185
+ > **Authority boundary (#665/#666/#680):** Mixed-jurisdiction review-level mappings are not part of this checklist. This section collects facts and exact bounded requirement pointers only; the output pathway is `institutional determination required`. Unknown selection or applicability stays unresolved, and neither this checklist nor #666 emits a review determination, readiness result, compliance conclusion, or authorization.
186
+
187
+ Apply `shared/references/human_subjects_authority_protocol.md` and use only
188
+ curated rows from `shared/human_subjects_authority_registry.json`. All shipped
189
+ profiles are bounded subsets.
190
+
191
+ ### 8.1 Authority Context and Exact Facts
192
+
193
+ - [ ] The review-ethics and data-protection axes each have an exact selected #666 profile or a visible unresolved state
194
+ - [ ] Profile selection records id, version, digest, and authority scope; geography, funder, language, and topic are not used to infer selection
195
+ - [ ] Confirmed, false, and unknown facts remain distinct
196
+ - [ ] The exact #666 fact catalogue has been addressed where relevant:
197
+ - [ ] `activity.human_subjects`
198
+ - [ ] `support.us_hhs_or_common_rule`
199
+ - [ ] `scope.tw_hsra`
200
+ - [ ] `scope.eu_gdpr`
201
+ - [ ] `processing.personal_data`
202
+ - [ ] `data.special_category`
203
+ - [ ] `data.collected_from_subject`
204
+ - [ ] `purpose.scientific_research`
205
+ - [ ] `gdpr.member_state_research_law_identified`
206
+ - [ ] Additional interaction, intervention, recruitment, population, power-relationship, sensitivity, deception, identifiability, and risk facts are labelled `illustrative/unprofiled` when they are not in the registry
207
+
208
+ Vulnerability, sensitivity, deception, public availability, identifiability,
209
+ and estimated risk are facts for the responsible institution. They do not map
210
+ to a pathway in this checklist.
211
+
212
+ ### 8.2 Exact Bounded Requirement Trace
213
+
214
+ Use these identifiers only as pointers to the full selected registry row,
215
+ including its predicate, obligated actor, consumer scopes, expected evidence,
216
+ and primary-source anchor. Do not restate them as universal requirements.
217
+
218
+ | Axis | Exact #666 requirement ids currently available |
219
+ |---|---|
220
+ | Review ethics — U.S. bounded profile | `us.45cfr46.107.irb-composition`; `us.45cfr46.116.informed-consent` |
221
+ | Review ethics — Taiwan bounded profile | `tw.hsra.article-7.committee-composition`; `tw.hsra.article-14.consent-information` |
222
+ | Data protection — GDPR bounded profile | `eu.gdpr.article-6.lawful-basis`; `eu.gdpr.article-9.special-category-research`; `eu.gdpr.article-13.direct-collection-information`; `eu.gdpr.article-14.indirect-collection-information`; `eu.gdpr.article-89.1.research-safeguards`; `eu.gdpr.article-89.2.member-state-derogation` |
223
+
224
+ - [ ] Each pointer belongs to an exactly selected profile whose resolved result permits profile-dependent use
225
+ - [ ] Committee-composition rows remain with their institutional/committee actors and are not converted into investigator packet requirements
226
+ - [ ] U.S. and Taiwan rows retain their own authority vocabulary and are not translated into one another's pathway terms
227
+ - [ ] Requirements outside these bounded rows are labelled `unprofiled` and referred to the responsible authority
228
+
229
+ ### 8.3 Participant-Information and Consent Preparation
230
+
231
+ - [ ] If applicable after exact resolution, the trace uses `us.45cfr46.116.informed-consent` or `tw.hsra.article-14.consent-information` rather than a merged universal element list
232
+ - [ ] If the selected GDPR facts resolve direct collection, participant information points to `eu.gdpr.article-13.direct-collection-information`; if they resolve collection elsewhere, it points to `eu.gdpr.article-14.indirect-collection-information`
233
+ - [ ] Waiver, exception, signature, assent, representative, recording, community-governance, sector, and institution-specific questions absent from the registry are visibly `unprofiled`
234
+ - [ ] Online-survey language accurately says whether the platform, institution, or research team collects or can access IP addresses, cookies, device identifiers, timestamps, contact fields, or other metadata
235
+ - [ ] A statement that metadata is not recorded is used only after platform settings and actual exports have been verified; unknown behavior is disclosed as unknown
236
+ - [ ] An electronic `I agree` interaction is described as an interaction record, not automatically as legally sufficient consent or signature
237
+
238
+ ### 8.4 Data-Handling Facts — Illustrative Technical Planning
239
+
240
+ These prompts do not establish an authority-defined anonymity,
241
+ de-identification, or compliance status:
242
+
243
+ - [ ] Direct identifiers, quasi-identifiers, quotations, rare attributes, and small-cell risks are inventoried
244
+ - [ ] Every identifier/re-link key has a named holder, access boundary, purpose, and retention state
245
+ - [ ] Platform collection, exports, logs, backups, recipients, transfers, encryption, access controls, retention, destruction, and incident handling are documented
246
+ - [ ] Participant-facing statements match the actual data flow and withdrawal/deletion feasibility
247
+ - [ ] Terminology is bound to the named convention in `shared/references/irb_terminology_glossary.md`
248
+
249
+ ### 8.5 Population and Context Facts — Illustrative and Unprofiled
250
+
251
+ | Population or context | Facts/questions to prepare; no pathway or requirement implied |
252
+ |---|---|
253
+ | Minors or participants with uncertain decision-making capacity | age, capacity, representative/assent questions, accessible explanation, and the applicable authority's process |
254
+ | Persons with disabilities | accessibility needs, communication format, capacity assumptions, support persons, and accommodation plan |
255
+ | Students, employees, or dependent relationships | recruitment authority, grading/employment effects, alternatives, privacy, and role separation |
256
+ | Indigenous peoples or communities | the specific community-governance authority/convention, collective and individual interests, data governance, and engagement expectations |
257
+ | Economically constrained participants | compensation, alternatives, dependency, undue-influence questions, and local institutional assessment |
258
+ | Incarcerated or otherwise institutionally confined participants | custodial setting, permission structure, voluntariness/coercion risks, privacy, and the applicable authority's process |
259
+
260
+ - [ ] Relevant population and contextual facts have been recorded without treating identity or vulnerability as an automatic review level
261
+ - [ ] Proposed safeguards and unresolved questions are presented to the responsible institution without a verdict
262
+ - [ ] Current institutional timeline, training, submission, reporting, and authorization requirements are requested; absent a dated response, they remain `unknown/unprofiled`
263
+
264
+ > For the portable fact flow, exact requirement anchors, survey metadata disclosure rule, and illustrative Taiwan/institution planning questions, see `references/irb_decision_tree.md`. Do not treat that reference as authorization.
265
+
266
+ ---
267
+
268
+ ## Quick Audit Checklist (Pre-Delivery Self-Check)
269
+
270
+ Before delivery, confirm ALL items (this is a self-check, not a veto):
271
+
272
+ - [ ] AI disclosure present and accurate
273
+ - [ ] All references spot-checked (minimum 20%)
274
+ - [ ] No fabricated citations detected
275
+ - [ ] Dual-use assessment completed
276
+ - [ ] Fair representation reviewed
277
+ - [ ] Data-source bases and unresolved legal/ethical questions documented
278
+ - [ ] Conflicts of interest disclosed
279
+ - [ ] Reproducibility documentation provided
280
+ - [ ] Writing is inclusive and respectful
281
+ - [ ] Report benefits stated audience without causing foreseeable harm
282
+ - [ ] If human-subjects activity is possible, are exact authority pointers or unresolved states, institutional questions, and the `institutional determination required` boundary visible?
@@ -0,0 +1,355 @@
1
+ # Failure Paths — Research Pipeline Failure Path Map
2
+
3
+ ## Overview
4
+
5
+ This document lists all failure scenarios that may be encountered across all modes of the deep-research skill, along with their detection conditions, user notification messages, handling steps, and recovery paths. The purpose is to ensure every failure scenario has a clear handling strategy, preventing users from reaching a dead end.
6
+
7
+ ---
8
+
9
+ ## Failure Path Summary
10
+
11
+ | # | Failure Scenario | Affected Modes | Severity | Handling Strategy |
12
+ |---|---------|---------|---------|---------|
13
+ | F1 | RQ cannot converge | full, socratic | Medium | Full: candidate workflow; Socratic: summarize user-expressed directions / suggest literature exploration |
14
+ | F2 | Insufficient literature | full, quick, lit-review | High | Expand search strategy |
15
+ | F3 | Methodology mismatch | full | High | Return to Phase 1 |
16
+ | F4 | Devil's Advocate CRITICAL | full | Critical | STOP + correct |
17
+ | F5 | Ethics BLOCKED | full, review | Critical | STOP + remediation path |
18
+ | F6 | Socratic dialogue does not converge | socratic | Medium | Switch to full mode |
19
+ | F7 | User abandons mid-process | all | Low | Save progress |
20
+ | F8 | Only Chinese-language literature available | full, lit-review | Medium | Switch search strategy |
21
+ | F9 | All source quality below threshold | full, fact-check | High | Downgrade or expand sources |
22
+ | F10 | Conclusions inconsistent with evidence | full | High | Return to Phase 3 |
23
+ | F11 | Revision loop exceeds limit | full | Medium | Force-complete + limitation list |
24
+ | F12 | Interdisciplinary bridging failure | full | Low | Revert to single discipline |
25
+
26
+ ---
27
+
28
+ ## Detailed Failure Paths
29
+
30
+ ### F1: Research Question Cannot Converge
31
+
32
+ **Affected Modes**: `full` (Phase 1), `socratic` (Layer 1)
33
+ **Severity**: Medium
34
+
35
+ **Trigger Conditions**:
36
+ - `full` mode: research_question_agent interaction exceeds 3 rounds, user still cannot determine the RQ
37
+ - `socratic` mode: Layer 1 exceeds 5 rounds, user repeatedly revises without a clear direction
38
+
39
+ **User Notification — `full` mode**:
40
+ > I notice we've been working on the research question for several rounds without a stable direction. I can organize the constraints we have identified, compare a small set of candidate questions, or pause for a literature review before we choose.
41
+
42
+ **User Notification — `socratic` mode**:
43
+ > We have not reached one research-question direction yet. I can summarize only the directions and preferences you have already expressed, continue with one focused question, or pause for a literature review before we return to the framing. I will not add candidate questions unless you explicitly ask me to leave non-generation Socratic mode and propose them.
44
+
45
+ **Handling Steps — `full` mode**:
46
+ 1. Compile key topics discussed and user-expressed preferences.
47
+ 2. Produce 3 candidate RQs, each with a brief explanation and rough FINER assessment.
48
+ 3. Ask the user to select or revise the closest one as a starting point.
49
+ 4. If the user still cannot choose, suggest `lit-review` mode before returning.
50
+
51
+ **Handling Steps — `socratic` mode (default)**:
52
+ 1. Compile a clearly labeled summary containing only directions and preferences
53
+ already expressed by the user; do not fill unresolved slots.
54
+ 2. Ask one focused question that helps the user distinguish those directions,
55
+ or offer to pause.
56
+ 3. Offer `lit-review` as an evidence-gathering route before restarting Layer 1.
57
+ 4. Do not generate, FINER-score, rank, or present a menu of candidate RQs.
58
+ Non-convergence alone is never authorization.
59
+
60
+ **Explicit generation request — visible exit from Socratic mode**:
61
+ - If, and only if, the user explicitly asks the system itself to propose
62
+ candidates, first state that the response is leaving non-generation Socratic
63
+ mode and emit this exact marker on a standalone line:
64
+ `[SOCRATIC-NON-GENERATION-EXIT: explicit_user_request]`.
65
+ - Only after the marker may the full-mode candidate workflow run. Label every
66
+ candidate as an AI-generated starting point, never as a user-derived insight.
67
+ - Do not silently re-enter Socratic mode; re-entry requires an explicit user
68
+ request to resume guided questioning.
69
+
70
+ **Recovery Paths**:
71
+ - Full mode: select or revise a candidate RQ, then continue the workflow.
72
+ - Socratic mode: the user refines one of their own expressed directions, then
73
+ restart Layer 1 without generating candidates.
74
+ - Do `lit-review`, then restart RQ clarification after the review is complete.
75
+ - Pause with the user-expressed-direction summary preserved.
76
+
77
+ ---
78
+
79
+ ### F2: Insufficient Literature
80
+
81
+ **Affected Modes**: `full` (Phase 2), `quick`, `lit-review`
82
+ **Severity**: High
83
+
84
+ **Trigger Conditions**:
85
+ - bibliography_agent finds < 5 usable sources after standard search strategy
86
+ - After excluding quality-unqualified sources, < 3 remain
87
+
88
+ **User Notification Message**:
89
+ > With the current search strategy, I found only limited relevant literature. This could mean: (1) this is a very new research area; (2) the search keywords need adjustment; (3) the research question scope may need refinement. Let me try expanding the search strategy.
90
+
91
+ **Handling Steps**:
92
+ 1. Expand search keywords (synonyms, broader terms, related concepts)
93
+ 2. Expand database scope (add grey literature, policy reports, working papers)
94
+ 3. Relax time range (from past 5 years to past 10 years)
95
+ 4. Try keywords from adjacent disciplines
96
+ 5. If still insufficient → suggest the user consider adjusting the RQ or accept this as an exploratory study
97
+
98
+ **Recovery Paths**:
99
+ - Expanded search yields sufficient literature → continue original workflow
100
+ - Accept as exploratory research → adjust report positioning, emphasize the study's pioneering nature
101
+ - Adjust RQ → return to Phase 1
102
+
103
+ ---
104
+
105
+ ### F3: Methodology Mismatch
106
+
107
+ **Affected Modes**: `full` (Checkpoint 1)
108
+ **Severity**: High
109
+
110
+ **Trigger Conditions**:
111
+ - devils_advocate_agent at Checkpoint 1 determines that the methodology proposed by research_architect_agent cannot answer the RQ produced by research_question_agent
112
+ - There is a logical gap between the methodology and the RQ
113
+
114
+ **User Notification Message**:
115
+ > Devil's Advocate found an important issue in the methodology review: your research question asks "why," but your method design can only answer "whether." Let's go back and adjust — here are three possible directions...
116
+
117
+ **Handling Steps**:
118
+ 1. Clearly state the gap between the RQ type (descriptive/comparative/causal/evaluative) and the method's capability
119
+ 2. Provide 3 alternative method suggestions, each with pros and cons
120
+ 3. Confirm whether the RQ needs adjustment to match a feasible method
121
+ 4. Re-execute research_architect_agent
122
+
123
+ **Recovery Paths**:
124
+ - Select an alternative method → regenerate Methodology Blueprint → Checkpoint 1 re-review
125
+ - Adjust RQ → return to research_question_agent → redo Phase 1
126
+ - Maximum 2 retries; if still mismatched on the 3rd attempt → suggest the user consult their advisor
127
+
128
+ ---
129
+
130
+ ### F4: Devil's Advocate CRITICAL
131
+
132
+ **Affected Modes**: `full` (any Checkpoint)
133
+ **Severity**: Critical
134
+
135
+ **Trigger Conditions**:
136
+ - devils_advocate_agent finds a Critical severity issue at any Checkpoint
137
+ - Includes: fatal logical flaws, core assumptions that cannot hold, evidence contradicting conclusions
138
+
139
+ **User Notification Message**:
140
+ > STOP — Devil's Advocate found a critical issue that must be resolved before continuing:
141
+ > [Specific issue description]
142
+ > This is not an issue that can be ignored, as it fundamentally affects the research's validity.
143
+
144
+ **Handling Steps**:
145
+ 1. Fully present the Critical issue's description, impact, and suggested correction direction
146
+ 2. Pause the workflow; do not allow advancement to the next Phase
147
+ 3. Wait for user response or correction
148
+ 4. After user correction → re-execute the Checkpoint
149
+ 5. 2 consecutive CRITICALs → suggest the user fundamentally rethink the research direction
150
+
151
+ **Recovery Paths**:
152
+ - User corrects the issue → re-execute Checkpoint → continue after PASS
153
+ - User chooses to modify the RQ/method → return to the corresponding Phase
154
+ - User abandons the direction → enter F7 workflow
155
+
156
+ ---
157
+
158
+ ### F5: Ethics BLOCKED
159
+
160
+ **Affected Modes**: `full` (Phase 5), `review`
161
+ **Severity**: Critical
162
+
163
+ **Trigger Conditions**:
164
+ - ethics_review_agent determines BLOCKED
165
+ - Integrity violations only — see the authoritative list in `agents/ethics_review_agent.md` §"Blocking Conditions" (fabricated references, missing AI disclosure, plagiarism, systematic source misrepresentation, concrete harm-enabling specifics without safeguards; human subjects with no IRB plan is **CONDITIONAL**, not BLOCKED).
166
+ - **NOT a trigger**: dual-use risk and politically/institutionally sensitive subject matter. Dual-use is advisory (routes to a Responsible Use Statement, never to BLOCKED — see `references/ethics_checklist.md` §3). Subject matter alone never blocks.
167
+
168
+ **User Notification Message**:
169
+ > Ethics Review flagged a Critical integrity concern that needs your confirmation before delivery:
170
+ > [Specific issue list]
171
+ > You can accept the suggested fix, **override with your reasoning** (recorded in the Ethics Decision Log), or revise. This is a one-time confirmation, not a veto. Suggested remediation paths:
172
+
173
+ **Handling Steps**:
174
+ 1. List all flagged reasons, each with specific remediation suggestions
175
+ 2. Distinguish between remediable (e.g., add informed consent statement) and irremediable (e.g., research design inherently has integrity problems)
176
+ 3. Remediable issues → provide modification suggestions → re-review after user confirmation
177
+ 4. Irremediable issues → suggest fundamental redesign of the research
178
+ 5. User may override any flag with recorded reasoning → log to the Ethics Decision Log and proceed; do not re-block an overridden item
179
+
180
+ **Recovery Paths**:
181
+ - Fix integrity issues → re-execute ethics_review_agent → continue after the integrity disposition is recorded; any human-subjects authorization remains a separate institutional status
182
+ - Modify research design → return to Phase 1
183
+ - Issues are irremediable → suggest abandoning this research direction, provide alternative direction suggestions
184
+
185
+ ---
186
+
187
+ ### F6: Socratic Dialogue Does Not Converge
188
+
189
+ **Affected Modes**: `socratic`
190
+ **Severity**: Medium
191
+
192
+ **Trigger Conditions**:
193
+ - Dialogue exceeds 10 rounds, user still vacillating between different directions
194
+ - Extracted INSIGHTs < 3
195
+
196
+ **User Notification Message**:
197
+ > We've explored several directions, each with its own value. However, I notice we've been going back and forth between a few directions — this may mean you have multifaceted interests in this topic, but it can also make the research hard to focus. Would you like to:
198
+ > (A) Continue the Socratic dialogue, but focus on [the most promising direction] you just mentioned?
199
+ > (B) Switch to full mode, and let my team help you systematically explore and converge?
200
+ > (C) Take a pause, think it over, and come back later?
201
+
202
+ **Handling Steps**:
203
+ 1. Compile currently extracted INSIGHTs
204
+ 2. Identify the 1-2 directions with the most convergence potential
205
+ 3. Provide 3 options (continue with focus / switch mode / pause)
206
+ 4. If user chooses to continue but still hasn't converged by round 15 → auto-compile + end
207
+
208
+ **Recovery Paths**:
209
+ - Continue with focus → restrict discussion scope, converge within 5 rounds
210
+ - Switch to full mode → pass extracted INSIGHTs to research_question_agent
211
+ - Pause → save INSIGHT list; user can re-enter at any time
212
+
213
+ ---
214
+
215
+ ### F7: User Abandons Mid-Process
216
+
217
+ **Affected Modes**: All modes
218
+ **Severity**: Low
219
+
220
+ **Trigger Conditions**:
221
+ - User explicitly states they don't want to continue ("never mind," "I quit," "too complicated")
222
+ - User abandons after a long period of non-response
223
+
224
+ **User Notification Message**:
225
+ > No problem. I've saved the current progress. Here's a summary of what we've accomplished so far:
226
+ > [List of completed stages and outputs]
227
+ > You can re-enter at any time by saying "continue the previous research," and we'll pick up where we left off.
228
+
229
+ **Handling Steps**:
230
+ 1. Save all outputs from the current stage (RQ Brief, INSIGHTs, Bibliography, etc.)
231
+ 2. Produce a progress summary
232
+ 3. Provide instructions for re-entry
233
+
234
+ **Recovery Paths**:
235
+ - User says "continue the previous research" → load saved outputs, continue from where interrupted
236
+ - User starts over → entirely new workflow
237
+
238
+ ---
239
+
240
+ ### F8: Only Chinese-Language Literature Available
241
+
242
+ **Affected Modes**: `full` (Phase 2), `lit-review`
243
+ **Severity**: Medium
244
+
245
+ **Trigger Conditions**:
246
+ - English academic database searches (Web of Science, Scopus, PubMed, etc.) yield empty or very few results
247
+ - The topic is strongly localized (e.g., Taiwan-specific policy, regulations, institutional systems)
248
+
249
+ **User Notification Message**:
250
+ > English-language literature on this topic is very limited, but Chinese-language literature resources are abundant. I will adjust the search strategy to include Chinese academic databases. Please note that citation conventions for Chinese-language literature in international publications may differ.
251
+
252
+ **Handling Steps**:
253
+ 1. Switch search strategy to Chinese academic databases (Airiti Library, National Digital Library of Theses and Dissertations in Taiwan, CNKI)
254
+ 2. Re-search using Chinese keywords
255
+ 3. Note the language distribution of the literature in the report
256
+ 4. If the user needs an English report → provide suggestions for English citation format of Chinese literature
257
+ 5. If the user needs to publish internationally → suggest finding comparable international cases
258
+
259
+ **Recovery Paths**:
260
+ - Chinese literature is sufficient → continue workflow with clear language annotations
261
+ - User needs international publication → suggest adjusting RQ to add a comparative perspective
262
+
263
+ ---
264
+
265
+ ### F9: All Source Quality Below Threshold
266
+
267
+ **Affected Modes**: `full` (Phase 2), `fact-check`
268
+ **Severity**: High
269
+
270
+ **Trigger Conditions**:
271
+ - source_verification_agent rates all found sources as Level V or below
272
+ - No peer-reviewed sources
273
+
274
+ **User Notification Message**:
275
+ > The overall quality of currently found sources is low, lacking high-quality peer-reviewed research. This may indicate an emerging field, or the search strategy may need adjustment. I suggest we consider...
276
+
277
+ **Handling Steps**:
278
+ 1. Expand source types (add policy reports, white papers, official statistics)
279
+ 2. Lower the threshold but clearly annotate quality levels
280
+ 3. Reposition the report as "preliminary exploration" rather than "systematic review"
281
+ 4. Add an "Evidence Quality Limitations" section to the report
282
+
283
+ **Recovery Paths**:
284
+ - Find sufficient alternative sources → continue workflow with clear quality annotations
285
+ - Cannot find qualified sources → suggest the user consider conducting primary research
286
+
287
+ ---
288
+
289
+ ### F10: Conclusions Inconsistent with Evidence
290
+
291
+ **Affected Modes**: `full` (Phase 5, Checkpoint 3)
292
+ **Severity**: High
293
+
294
+ **Trigger Conditions**:
295
+ - editor_in_chief_agent or devils_advocate_agent finds in Phase 5 that report conclusions exceed the scope supported by the evidence
296
+
297
+ **User Notification Message**:
298
+ > The review found that some conclusions in the report go beyond what the evidence supports. Specifically:
299
+ > [List of issues]
300
+ > I will return for revision to ensure every conclusion has corresponding evidence support.
301
+
302
+ **Handling Steps**:
303
+ 1. Flag all "over-inferred" conclusions
304
+ 2. For each flag: (a) weaken the conclusion to match the evidence, or (b) supplement with additional evidence
305
+ 3. Re-execute Checkpoint 3
306
+
307
+ **Recovery Paths**:
308
+ - Revision successful → complete Phase 6
309
+ - Issues remain after revision → 2nd revision round
310
+ - Issues remain after 2 revisions → convert issues to a "Research Limitations" section
311
+
312
+ ---
313
+
314
+ ### F11: Revision Loop Exceeds Limit
315
+
316
+ **Affected Modes**: `full` (Phase 6)
317
+ **Severity**: Medium
318
+
319
+ **Trigger Conditions**:
320
+ - Phase 6 revision has been executed 2 times (maximum), with unresolved Major issues remaining
321
+
322
+ **User Notification Message**:
323
+ > After two rounds of revision, the following issues have been resolved: [resolved list]. However, the following issues remain unresolved due to inherent research limitations: [unresolved list]. These will be listed in the "Acknowledged Limitations" section. The report is now the best version achievable under current conditions.
324
+
325
+ **Handling Steps**:
326
+ 1. Compile resolved and unresolved issues
327
+ 2. Convert unresolved Major issues into the "Acknowledged Limitations" section
328
+ 3. Deliver the final report
329
+
330
+ **Recovery Paths**:
331
+ - User accepts → deliver the report
332
+ - User does not accept → suggest redesigning the research from Phase 1
333
+
334
+ ---
335
+
336
+ ### F12: Interdisciplinary Bridging Failure
337
+
338
+ **Affected Modes**: `full`
339
+ **Severity**: Low
340
+
341
+ **Trigger Conditions**:
342
+ - synthesis_agent attempts interdisciplinary integration but cannot find meaningful connections
343
+ - Conceptual frameworks from different disciplines cannot be reconciled
344
+
345
+ **User Notification Message**:
346
+ > I attempted to integrate perspectives from [Discipline A] and [Discipline B], but these two disciplines' understanding frameworks for this phenomenon differ substantially. Forcing integration may actually blur the focus. I suggest we center on the [primary discipline] framework, and mention other disciplines' perspectives in the discussion section as reference.
347
+
348
+ **Handling Steps**:
349
+ 1. Select the primary disciplinary framework as the analytical foundation
350
+ 2. Present other disciplinary perspectives in an "Alternative Perspectives" or "Interdisciplinary Insights" section
351
+ 3. Do not force integration of irreconcilable frameworks
352
+
353
+ **Recovery Paths**:
354
+ - Focus on a single framework → continue workflow
355
+ - User insists on interdisciplinary → suggest switching to mixed-methods or narrative review