psyclaw 0.27.22 → 0.28.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +11 -5
- package/dist/apps/panel/index.html +2 -2
- package/dist/src/adapters/pi/extension.js +225 -92
- package/dist/src/adapters/pi/extension.js.map +1 -1
- package/dist/src/agents/import.js +44 -32
- package/dist/src/agents/import.js.map +1 -1
- package/dist/src/analysis/hooks.d.ts +1 -0
- package/dist/src/analysis/hooks.js +20 -1
- package/dist/src/analysis/hooks.js.map +1 -1
- package/dist/src/ars/bridge.d.ts +20 -0
- package/dist/src/ars/bridge.js +132 -0
- package/dist/src/ars/bridge.js.map +1 -0
- package/dist/src/ars/contracts.d.ts +55 -0
- package/dist/src/ars/contracts.js +2 -0
- package/dist/src/ars/contracts.js.map +1 -0
- package/dist/src/ars/panel-plan.d.ts +4 -0
- package/dist/src/ars/panel-plan.js +11 -0
- package/dist/src/ars/panel-plan.js.map +1 -0
- package/dist/src/ars/pi-panel-executor.d.ts +30 -0
- package/dist/src/ars/pi-panel-executor.js +140 -0
- package/dist/src/ars/pi-panel-executor.js.map +1 -0
- package/dist/src/ars/profile.d.ts +36 -0
- package/dist/src/ars/profile.js +119 -0
- package/dist/src/ars/profile.js.map +1 -0
- package/dist/src/ars/re-review.d.ts +22 -0
- package/dist/src/ars/re-review.js +172 -0
- package/dist/src/ars/re-review.js.map +1 -0
- package/dist/src/branding.d.ts +2 -4
- package/dist/src/branding.js +3 -5
- package/dist/src/branding.js.map +1 -1
- package/dist/src/bundled-tools.d.ts +3 -0
- package/dist/src/bundled-tools.js +21 -0
- package/dist/src/bundled-tools.js.map +1 -0
- package/dist/src/chat.js +6 -5
- package/dist/src/chat.js.map +1 -1
- package/dist/src/creation/contracts.d.ts +38 -0
- package/dist/src/creation/contracts.js +2 -0
- package/dist/src/creation/contracts.js.map +1 -0
- package/dist/src/creation/service.d.ts +7 -0
- package/dist/src/creation/service.js +196 -0
- package/dist/src/creation/service.js.map +1 -0
- package/dist/src/index.d.ts +10 -0
- package/dist/src/index.js +10 -0
- package/dist/src/index.js.map +1 -1
- package/dist/src/install/installer.js +32 -10
- package/dist/src/install/installer.js.map +1 -1
- package/dist/src/orchestration/personas.d.ts +15 -0
- package/dist/src/orchestration/personas.js +51 -0
- package/dist/src/orchestration/personas.js.map +1 -0
- package/dist/src/orchestration/pi-executor.d.ts +1 -0
- package/dist/src/orchestration/pi-executor.js +1 -1
- package/dist/src/orchestration/pi-executor.js.map +1 -1
- package/dist/src/panel/extension.js +29 -8
- package/dist/src/panel/extension.js.map +1 -1
- package/dist/src/panel/server.js +14 -5
- package/dist/src/panel/server.js.map +1 -1
- package/dist/src/project/paths.d.ts +3 -0
- package/dist/src/project/paths.js +7 -0
- package/dist/src/project/paths.js.map +1 -1
- package/dist/src/rules/user-rules.d.ts +8 -0
- package/dist/src/rules/user-rules.js +36 -0
- package/dist/src/rules/user-rules.js.map +1 -0
- package/dist/src/skills/contracts.d.ts +4 -4
- package/dist/src/skills/recommended.js +1 -1
- package/dist/src/skills/registry.js +49 -28
- package/dist/src/skills/registry.js.map +1 -1
- package/dist/src/style/cli-ui.js +0 -1
- package/dist/src/style/cli-ui.js.map +1 -1
- package/package.json +14 -3
- package/scripts/rebrand-pi.mjs +6 -0
- package/skills/recommended/catalog.json +2 -11
- package/vendor/ars/.claude/CLAUDE.md +371 -0
- package/vendor/ars/.command-invariants.toml +24 -0
- package/vendor/ars/CITATION.cff +35 -0
- package/vendor/ars/LICENSE +417 -0
- package/vendor/ars/MODE_REGISTRY.md +76 -0
- package/vendor/ars/NOTICE.md +26 -0
- package/vendor/ars/POSITIONING.md +99 -0
- package/vendor/ars/PSYCLAW_SOURCE.json +10 -0
- package/vendor/ars/README.md +751 -0
- package/vendor/ars/SECURITY.md +52 -0
- package/vendor/ars/THIRD_PARTY.md +70 -0
- package/vendor/ars/academic-paper/SKILL.md +542 -0
- package/vendor/ars/academic-paper/agents/abstract_bilingual_agent.md +171 -0
- package/vendor/ars/academic-paper/agents/argument_builder_agent.md +276 -0
- package/vendor/ars/academic-paper/agents/citation_compliance_agent.md +422 -0
- package/vendor/ars/academic-paper/agents/draft_writer_agent.md +656 -0
- package/vendor/ars/academic-paper/agents/formatter_agent.md +999 -0
- package/vendor/ars/academic-paper/agents/intake_agent.md +393 -0
- package/vendor/ars/academic-paper/agents/literature_strategist_agent.md +626 -0
- package/vendor/ars/academic-paper/agents/peer_reviewer_agent.md +516 -0
- package/vendor/ars/academic-paper/agents/revision_coach_agent.md +334 -0
- package/vendor/ars/academic-paper/agents/socratic_mentor_agent.md +527 -0
- package/vendor/ars/academic-paper/agents/structure_architect_agent.md +401 -0
- package/vendor/ars/academic-paper/agents/visualization_agent.md +441 -0
- package/vendor/ars/academic-paper/examples/chinese_paper_example.md +278 -0
- package/vendor/ars/academic-paper/examples/clinical_citation_verification_checklist.md +95 -0
- package/vendor/ars/academic-paper/examples/clinical_epistemic_status_example.md +100 -0
- package/vendor/ars/academic-paper/examples/commitment_ledger_example.md +147 -0
- package/vendor/ars/academic-paper/examples/imrad_hei_example.md +234 -0
- package/vendor/ars/academic-paper/examples/literature_review_example.md +260 -0
- package/vendor/ars/academic-paper/examples/plan_mode_guided_writing.md +600 -0
- package/vendor/ars/academic-paper/examples/revision_mode_example.md +344 -0
- package/vendor/ars/academic-paper/examples/revision_recovery_example.md +506 -0
- package/vendor/ars/academic-paper/examples/version_family_reconciliation_example.md +89 -0
- package/vendor/ars/academic-paper/references/abstract_writing_guide.md +169 -0
- package/vendor/ars/academic-paper/references/academic_writing_style.md +188 -0
- package/vendor/ars/academic-paper/references/anti_leakage_protocol.md +83 -0
- package/vendor/ars/academic-paper/references/apa7_chinese_citation_guide.md +364 -0
- package/vendor/ars/academic-paper/references/apa7_extended_guide.md +198 -0
- package/vendor/ars/academic-paper/references/changelog.md +11 -0
- package/vendor/ars/academic-paper/references/citation_format_switcher.md +228 -0
- package/vendor/ars/academic-paper/references/committee_correspondence_protocol.md +158 -0
- package/vendor/ars/academic-paper/references/credit_authorship_guide.md +308 -0
- package/vendor/ars/academic-paper/references/disclosure_mode_protocol.md +478 -0
- package/vendor/ars/academic-paper/references/domain_evidence_profiles.md +38 -0
- package/vendor/ars/academic-paper/references/failure_paths.md +349 -0
- package/vendor/ars/academic-paper/references/funding_statement_guide.md +319 -0
- package/vendor/ars/academic-paper/references/hei_domain_glossary.md +169 -0
- package/vendor/ars/academic-paper/references/intro_title_rhetoric_guide.md +114 -0
- package/vendor/ars/academic-paper/references/journal_submission_guide.md +249 -0
- package/vendor/ars/academic-paper/references/latex_template_reference.md +378 -0
- package/vendor/ars/academic-paper/references/mode_selection_guide.md +378 -0
- package/vendor/ars/academic-paper/references/paper_structure_patterns.md +330 -0
- package/vendor/ars/academic-paper/references/plan_mode_protocol.md +112 -0
- package/vendor/ars/academic-paper/references/policy_anchor_disclosure_protocol.md +200 -0
- package/vendor/ars/academic-paper/references/policy_anchor_table.md +157 -0
- package/vendor/ars/academic-paper/references/revision_patch_protocol.md +173 -0
- package/vendor/ars/academic-paper/references/statistical_visualization_standards.md +750 -0
- package/vendor/ars/academic-paper/references/venue_disclosure_policies.md +259 -0
- package/vendor/ars/academic-paper/references/vlm_figure_verification.md +126 -0
- package/vendor/ars/academic-paper/references/workflow_phase_details.md +135 -0
- package/vendor/ars/academic-paper/references/writing_judgment_framework.md +59 -0
- package/vendor/ars/academic-paper/references/writing_quality_check.md +173 -0
- package/vendor/ars/academic-paper/templates/bilingual_abstract_template.md +78 -0
- package/vendor/ars/academic-paper/templates/case_study_template.md +129 -0
- package/vendor/ars/academic-paper/templates/conference_paper_template.md +108 -0
- package/vendor/ars/academic-paper/templates/credit_statement_template.md +132 -0
- package/vendor/ars/academic-paper/templates/funding_statement_template.md +290 -0
- package/vendor/ars/academic-paper/templates/imrad_template.md +183 -0
- package/vendor/ars/academic-paper/templates/latex_article_template.tex +199 -0
- package/vendor/ars/academic-paper/templates/literature_review_template.md +135 -0
- package/vendor/ars/academic-paper/templates/policy_brief_template.md +139 -0
- package/vendor/ars/academic-paper/templates/revision_tracking_template.md +199 -0
- package/vendor/ars/academic-paper/templates/theoretical_paper_template.md +119 -0
- package/vendor/ars/academic-paper-reviewer/SKILL.md +491 -0
- package/vendor/ars/academic-paper-reviewer/agents/devils_advocate_reviewer_agent.md +443 -0
- package/vendor/ars/academic-paper-reviewer/agents/domain_reviewer_agent.md +412 -0
- package/vendor/ars/academic-paper-reviewer/agents/editorial_synthesizer_agent.md +478 -0
- package/vendor/ars/academic-paper-reviewer/agents/eic_agent.md +339 -0
- package/vendor/ars/academic-paper-reviewer/agents/field_analyst_agent.md +221 -0
- package/vendor/ars/academic-paper-reviewer/agents/methodology_reviewer_agent.md +449 -0
- package/vendor/ars/academic-paper-reviewer/agents/perspective_reviewer_agent.md +427 -0
- package/vendor/ars/academic-paper-reviewer/examples/hei_paper_review_example.md +391 -0
- package/vendor/ars/academic-paper-reviewer/examples/interdisciplinary_review_example.md +299 -0
- package/vendor/ars/academic-paper-reviewer/examples/subclaim_decomposition_example.md +80 -0
- package/vendor/ars/academic-paper-reviewer/references/calibration_mode_protocol.md +256 -0
- package/vendor/ars/academic-paper-reviewer/references/changelog.md +10 -0
- package/vendor/ars/academic-paper-reviewer/references/editorial_decision_standards.md +236 -0
- package/vendor/ars/academic-paper-reviewer/references/guided_mode_protocol.md +34 -0
- package/vendor/ars/academic-paper-reviewer/references/integration_guide.md +15 -0
- package/vendor/ars/academic-paper-reviewer/references/quality_rubrics.md +84 -0
- package/vendor/ars/academic-paper-reviewer/references/re_review_mode_protocol.md +340 -0
- package/vendor/ars/academic-paper-reviewer/references/review_criteria_framework.md +98 -0
- package/vendor/ars/academic-paper-reviewer/references/review_panel_provenance_protocol.md +197 -0
- package/vendor/ars/academic-paper-reviewer/references/review_quality_thinking.md +58 -0
- package/vendor/ars/academic-paper-reviewer/references/reviewer_sprint_prompt_source.md +324 -0
- package/vendor/ars/academic-paper-reviewer/references/sprint_contract_protocol.md +296 -0
- package/vendor/ars/academic-paper-reviewer/references/statistical_reporting_standards.md +505 -0
- package/vendor/ars/academic-paper-reviewer/references/top_journals_by_field.md +206 -0
- package/vendor/ars/academic-paper-reviewer/templates/editorial_decision_template.md +235 -0
- package/vendor/ars/academic-paper-reviewer/templates/peer_review_report_template.md +305 -0
- package/vendor/ars/academic-paper-reviewer/templates/revision_response_template.md +248 -0
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- package/vendor/ars/academic-pipeline/agents/claim_ref_alignment_audit_agent.md +382 -0
- package/vendor/ars/academic-pipeline/agents/collaboration_depth_agent.md +164 -0
- package/vendor/ars/academic-pipeline/agents/integrity_verification_agent.md +870 -0
- package/vendor/ars/academic-pipeline/agents/pipeline_orchestrator_agent.md +1379 -0
- package/vendor/ars/academic-pipeline/agents/state_tracker_agent.md +622 -0
- package/vendor/ars/academic-pipeline/examples/full_pipeline_example.md +482 -0
- package/vendor/ars/academic-pipeline/examples/integrity_failure_recovery.md +389 -0
- package/vendor/ars/academic-pipeline/examples/mid_entry_example.md +414 -0
- package/vendor/ars/academic-pipeline/references/adapters/.gitkeep +0 -0
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- package/vendor/ars/academic-pipeline/references/ai_research_failure_modes.md +185 -0
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- package/vendor/ars/academic-pipeline/references/claim_audit_calibration_protocol.md +175 -0
- package/vendor/ars/academic-pipeline/references/claim_verification_protocol.md +282 -0
- package/vendor/ars/academic-pipeline/references/external_review_protocol.md +131 -0
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- package/vendor/ars/academic-pipeline/references/passport_as_reset_boundary.md +132 -0
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- package/vendor/ars/academic-pipeline/references/progress_dashboard_template.md +38 -0
- package/vendor/ars/academic-pipeline/references/reinforcement_content.md +15 -0
- package/vendor/ars/academic-pipeline/references/reproducibility_audit.md +55 -0
- package/vendor/ars/academic-pipeline/references/score_trajectory_protocol.md +78 -0
- package/vendor/ars/academic-pipeline/references/team_collaboration_protocol.md +261 -0
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- package/vendor/ars/agents/report_compiler_agent.md +341 -0
- package/vendor/ars/agents/research_architect_agent.md +298 -0
- package/vendor/ars/agents/synthesis_agent.md +356 -0
- package/vendor/ars/commands/ars-3w.md +10 -0
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- package/vendor/ars/scripts/uncited_assertion_detector.py +254 -0
- package/vendor/ars/scripts/v3_6_7_inversion_manifest.json +9 -0
- package/vendor/ars/scripts/v3_6_8_inversion_manifest.json +10 -0
- package/vendor/ars/scripts/validate_claim_standing_stance_assets.py +249 -0
- package/vendor/ars/scripts/validate_compliance_fixtures.py +56 -0
- package/vendor/ars/scripts/validate_ideation_diversity_assets.py +303 -0
- package/vendor/ars/scripts/venue_disclosure_contract_harness.py +837 -0
- package/vendor/ars/scripts/verification_cache.py +276 -0
- package/vendor/ars/scripts/verification_gate/__init__.py +345 -0
- package/vendor/ars/scripts/verify_passport.py +133 -0
- package/vendor/ars/scripts/verify_submission_package.py +1657 -0
- package/vendor/ars/shared/agents/compliance_agent.md +136 -0
- package/vendor/ars/shared/artifact_reproducibility_pattern.md +173 -0
- package/vendor/ars/shared/benchmark_report.schema.json +81 -0
- package/vendor/ars/shared/benchmark_report_pattern.md +180 -0
- package/vendor/ars/shared/bibliographic_integrity_signals.md +142 -0
- package/vendor/ars/shared/collaboration_depth_rubric.md +154 -0
- package/vendor/ars/shared/compliance_checkpoint_protocol.md +162 -0
- package/vendor/ars/shared/compliance_report.schema.json +187 -0
- package/vendor/ars/shared/contracts/README.md +938 -0
- package/vendor/ars/shared/contracts/activity/adjudication_activity_input.schema.json +555 -0
- package/vendor/ars/shared/contracts/activity/adjudication_activity_store.schema.json +560 -0
- package/vendor/ars/shared/contracts/audit/audit_jsonl.schema.json +128 -0
- package/vendor/ars/shared/contracts/audit/audit_sidecar.schema.json +169 -0
- package/vendor/ars/shared/contracts/audit/audit_verdict.schema.json +133 -0
- package/vendor/ars/shared/contracts/audit/cross_document_consistency_advisory.schema.json +480 -0
- package/vendor/ars/shared/contracts/audit/cross_document_consistency_advisory_draft.schema.json +564 -0
- package/vendor/ars/shared/contracts/audit/cross_document_source_manifest.schema.json +202 -0
- package/vendor/ars/shared/contracts/audit/tortured_phrase_advisory.schema.json +1362 -0
- package/vendor/ars/shared/contracts/audit/tortured_phrase_snapshot.schema.json +208 -0
- package/vendor/ars/shared/contracts/audit/tortured_phrase_snapshot_manifest.schema.json +335 -0
- package/vendor/ars/shared/contracts/capability/stage_capability_matrix.json +434 -0
- package/vendor/ars/shared/contracts/claim_standing/candidate_ledger.schema.json +705 -0
- package/vendor/ars/shared/contracts/claim_standing/query_plan.schema.json +389 -0
- package/vendor/ars/shared/contracts/claim_standing/query_plan_v1_1.schema.json +782 -0
- package/vendor/ars/shared/contracts/claim_standing/retrieval_input.schema.json +440 -0
- package/vendor/ars/shared/contracts/claim_standing/stance_record.schema.json +460 -0
- package/vendor/ars/shared/contracts/claim_standing/transmission_ledger.schema.json +282 -0
- package/vendor/ars/shared/contracts/cross_model/codex_citation_receipt.schema.json +157 -0
- package/vendor/ars/shared/contracts/cross_model/codex_citation_request.schema.json +23 -0
- package/vendor/ars/shared/contracts/cross_model/promotion_bakeoff_sealed_commitment.schema.json +55 -0
- package/vendor/ars/shared/contracts/cross_model/promotion_bakeoff_sealed_reveal.schema.json +50 -0
- package/vendor/ars/shared/contracts/degradation_registry.json +428 -0
- package/vendor/ars/shared/contracts/evaluator/full.json +126 -0
- package/vendor/ars/shared/contracts/evidence/claim_registry.schema.json +50 -0
- package/vendor/ars/shared/contracts/evidence/claim_registry_coverage_report.schema.json +79 -0
- package/vendor/ars/shared/contracts/evidence/evidence_row.schema.json +504 -0
- package/vendor/ars/shared/contracts/evidence/evidence_row_v1_1.schema.json +364 -0
- package/vendor/ars/shared/contracts/evidence/evidence_row_v1_2.schema.json +714 -0
- package/vendor/ars/shared/contracts/evidence/evidence_row_v1_3.schema.json +524 -0
- package/vendor/ars/shared/contracts/human_subjects/authority_profile_registry.schema.json +497 -0
- package/vendor/ars/shared/contracts/human_subjects/committee_correspondence.schema.json +253 -0
- package/vendor/ars/shared/contracts/human_subjects/content_coverage_advisory.schema.json +620 -0
- package/vendor/ars/shared/contracts/human_subjects/irb_context_record.schema.json +329 -0
- package/vendor/ars/shared/contracts/human_subjects/resolved_authority_context.schema.json +347 -0
- package/vendor/ars/shared/contracts/human_subjects/review_pathway_rule_trace.schema.json +265 -0
- package/vendor/ars/shared/contracts/human_subjects/review_pathway_trace_request.schema.json +127 -0
- package/vendor/ars/shared/contracts/human_subjects/submission_packet_inventory.schema.json +240 -0
- package/vendor/ars/shared/contracts/human_subjects/submission_packet_manifest.schema.json +999 -0
- package/vendor/ars/shared/contracts/passport/audit_artifact_entry.schema.json +266 -0
- package/vendor/ars/shared/contracts/passport/bibliographic_integrity_signal.schema.json +1676 -0
- package/vendor/ars/shared/contracts/passport/citation_provenance.schema.json +107 -0
- package/vendor/ars/shared/contracts/passport/citation_verification_summary.schema.json +164 -0
- package/vendor/ars/shared/contracts/passport/claim_audit_result.schema.json +124 -0
- package/vendor/ars/shared/contracts/passport/claim_drift.schema.json +58 -0
- package/vendor/ars/shared/contracts/passport/claim_intent_manifest.schema.json +107 -0
- package/vendor/ars/shared/contracts/passport/constraint_violation.schema.json +65 -0
- package/vendor/ars/shared/contracts/passport/experiment_alignment_result.schema.json +69 -0
- package/vendor/ars/shared/contracts/passport/experiment_provenance_entry.schema.json +169 -0
- package/vendor/ars/shared/contracts/passport/human_read_log.schema.json +86 -0
- package/vendor/ars/shared/contracts/passport/inquiry_ledger_ref.schema.json +22 -0
- package/vendor/ars/shared/contracts/passport/literature_corpus_entry.schema.json +650 -0
- package/vendor/ars/shared/contracts/passport/preregistration_artifact.schema.json +132 -0
- package/vendor/ars/shared/contracts/passport/rejection_log.schema.json +89 -0
- package/vendor/ars/shared/contracts/passport/reset_ledger_entry.schema.json +158 -0
- package/vendor/ars/shared/contracts/passport/temporal_audit_results.schema.json +208 -0
- package/vendor/ars/shared/contracts/passport/terminal_policies.schema.json +50 -0
- package/vendor/ars/shared/contracts/passport/timeline.schema.json +102 -0
- package/vendor/ars/shared/contracts/passport/uncited_assertion.schema.json +56 -0
- package/vendor/ars/shared/contracts/passport/uncited_audit_failure.schema.json +72 -0
- package/vendor/ars/shared/contracts/passport/user_attested_read_resolution.schema.json +87 -0
- package/vendor/ars/shared/contracts/passport/version_records.schema.json +138 -0
- package/vendor/ars/shared/contracts/patch/block_manifest.schema.json +45 -0
- package/vendor/ars/shared/contracts/patch/legacy/v1_0/revision_patch.schema.json +110 -0
- package/vendor/ars/shared/contracts/patch/revision_patch.schema.json +250 -0
- package/vendor/ars/shared/contracts/pdf/pdf_content_classifier_diagnostic.schema.json +39 -0
- package/vendor/ars/shared/contracts/pdf/pdf_content_classifier_worker.schema.json +88 -0
- package/vendor/ars/shared/contracts/pdf/pdf_read_preflight.schema.json +227 -0
- package/vendor/ars/shared/contracts/re_review/input_manifest.schema.json +161 -0
- package/vendor/ars/shared/contracts/re_review/legacy/v1_0/input_manifest.schema.json +134 -0
- package/vendor/ars/shared/contracts/re_review/legacy/v1_0/precommitment.schema.json +193 -0
- package/vendor/ars/shared/contracts/re_review/legacy/v1_0/traceability.schema.json +841 -0
- package/vendor/ars/shared/contracts/re_review/legacy/v1_0/verdict_record.schema.json +244 -0
- package/vendor/ars/shared/contracts/re_review/precommitment.schema.json +193 -0
- package/vendor/ars/shared/contracts/re_review/traceability.schema.json +916 -0
- package/vendor/ars/shared/contracts/re_review/verdict_record.schema.json +245 -0
- package/vendor/ars/shared/contracts/research_workflow/inquiry_branch_ledger.schema.json +449 -0
- package/vendor/ars/shared/contracts/research_workflow/research_workflow_profile.schema.json +222 -0
- package/vendor/ars/shared/contracts/research_workflow/research_workflow_profile_selection_receipt.schema.json +111 -0
- package/vendor/ars/shared/contracts/review_target/constructive_review_findings.schema.json +172 -0
- package/vendor/ars/shared/contracts/review_target/criteria_registry.schema.json +97 -0
- package/vendor/ars/shared/contracts/review_target/review_criteria_binding_manifest.schema.json +235 -0
- package/vendor/ars/shared/contracts/review_target/review_criteria_source_receipt.schema.json +158 -0
- package/vendor/ars/shared/contracts/review_target/review_target_context.schema.json +106 -0
- package/vendor/ars/shared/contracts/review_target/review_target_declaration.schema.json +118 -0
- package/vendor/ars/shared/contracts/reviewer/full.json +114 -0
- package/vendor/ars/shared/contracts/reviewer/methodology_focus.json +75 -0
- package/vendor/ars/shared/contracts/reviewer/review_panel_provenance.schema.json +263 -0
- package/vendor/ars/shared/contracts/reviewer/review_panel_provenance_carrier.schema.json +122 -0
- package/vendor/ars/shared/contracts/reviewer/review_panel_provenance_input.schema.json +120 -0
- package/vendor/ars/shared/contracts/revision/author_adjudication.schema.json +251 -0
- package/vendor/ars/shared/contracts/revision/author_adjudication_input.schema.json +25 -0
- package/vendor/ars/shared/contracts/revision/claim_strength_drift_disposition.schema.json +97 -0
- package/vendor/ars/shared/contracts/revision/claim_strength_drift_disposition_input.schema.json +80 -0
- package/vendor/ars/shared/contracts/revision/claim_strength_drift_findings.schema.json +139 -0
- package/vendor/ars/shared/contracts/revision/claim_surface_manifest.schema.json +99 -0
- package/vendor/ars/shared/contracts/revision/integrity_correction_authorization.schema.json +140 -0
- package/vendor/ars/shared/contracts/revision/integrity_correction_authorization_input.schema.json +28 -0
- package/vendor/ars/shared/contracts/revision/integrity_correction_list.schema.json +48 -0
- package/vendor/ars/shared/contracts/revision/integrity_pass_receipt.schema.json +16 -0
- package/vendor/ars/shared/contracts/revision/revision_evidence_bundle.schema.json +134 -0
- package/vendor/ars/shared/contracts/revision/revision_roadmap.schema.json +334 -0
- package/vendor/ars/shared/contracts/submission/format_profile.example.yaml +33 -0
- package/vendor/ars/shared/contracts/submission/format_profile.schema.json +102 -0
- package/vendor/ars/shared/contracts/submission/submission_verification_report.schema.json +233 -0
- package/vendor/ars/shared/contracts/submission/venue_profile.schema.json +114 -0
- package/vendor/ars/shared/contracts/writer/full.json +87 -0
- package/vendor/ars/shared/cross_model_verification.md +714 -0
- package/vendor/ars/shared/evals_lift_report.schema.json +141 -0
- package/vendor/ars/shared/ground_truth_isolation_pattern.md +275 -0
- package/vendor/ars/shared/handoff_schemas.md +1209 -0
- package/vendor/ars/shared/human_subjects_authority_registry.json +1278 -0
- package/vendor/ars/shared/mode_spectrum.md +57 -0
- package/vendor/ars/shared/model_tiering.md +83 -0
- package/vendor/ars/shared/policy_data/nature_policy.md +56 -0
- package/vendor/ars/shared/prisma_trAIce_protocol.md +157 -0
- package/vendor/ars/shared/raise_framework.md +129 -0
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- package/vendor/ars/shared/references/claim_standing_candidate_ledger_protocol.md +66 -0
- package/vendor/ars/shared/references/claim_strength_ladder.md +93 -0
- package/vendor/ars/shared/references/cross_document_consistency_advisory_protocol.md +263 -0
- package/vendor/ars/shared/references/evidence_row_protocol.md +260 -0
- package/vendor/ars/shared/references/firm_rules.md +90 -0
- package/vendor/ars/shared/references/human_subjects_authority_protocol.md +274 -0
- package/vendor/ars/shared/references/intent_clarification_protocol.md +168 -0
- package/vendor/ars/shared/references/irb_terminology_glossary.md +229 -0
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- package/vendor/ars/shared/references/psychometric_terminology_glossary.md +109 -0
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- package/vendor/ars/shared/references/review_pathway_rule_trace_protocol.md +166 -0
- package/vendor/ars/shared/references/submission_packet_manifest_protocol.md +292 -0
- package/vendor/ars/shared/references/word_count_conventions.md +124 -0
- package/vendor/ars/shared/research_workflow_profiles/field_general.json +1 -0
- package/vendor/ars/shared/review_criteria_registry.json +207 -0
- package/vendor/ars/shared/review_criteria_sources/msr-2027-technical-papers.2026-08-24.json +46 -0
- package/vendor/ars/shared/review_criteria_sources/sigsoft-empirical-standards.2026-08-24.json +31 -0
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#!/usr/bin/env python3
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"""Live discovery adapters for the #655 claim-standing probe (Track A head).
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Turns a consent-bound `claim-standing-query-plan/1.0` into a
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`claim-standing-retrieval-input/1.0` record: one closed adapter per index, the
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frozen v1 caps, adapter-boundary truncation, and the closed failure vocabulary.
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discovery interfaces the design requires, and this module never imports the
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later, separately consented slice. The emitted retrieval input therefore
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carries an empty `relevance_assessments` array; the candidate-ledger builder
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will refuse to finalize until a caller supplies one assessment per computed
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work family. No stance classification, rendering, pipeline, or evidence-row
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surface exists here. Adapters are written against the providers' documented
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Known mapping limitation: Semantic Scholar, OpenAlex, and arXiv return
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import sys
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# Keep the sibling import working whether this file is executed directly or
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# imported as scripts.claim_standing_discovery, without creating a second
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# module instance (exception identity matters across these tools).
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try:
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USER_AGENT = "ars-claim-standing-discovery/0.1"
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language: str | None,
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publication_status: str,
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landing_url: str | None,
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raw_record: Any,
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) -> dict[str, Any]:
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"publication_status": publication_status,
|
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"abstract_state": "available" if abstract_text else "missing",
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"abstract_text": abstract_text,
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"landing_url": landing_url,
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"raw_record": raw_record,
|
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}
|
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125
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+
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126
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+
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+
def _name_author(name: Any) -> dict[str, str | None]:
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return {"family": _clean(name), "given": None}
|
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129
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+
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130
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+
|
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131
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+
def _year_filter(
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date_filter: dict[str, Any], from_key: str, to_key: str
|
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133
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+
) -> str | None:
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+
filters = []
|
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135
|
+
if date_filter["from_year"] is not None:
|
|
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|
+
filters.append(f"{from_key}:{date_filter['from_year']}-01-01")
|
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137
|
+
if date_filter["through_year"] is not None:
|
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|
+
filters.append(f"{to_key}:{date_filter['through_year']}-12-31")
|
|
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|
+
return ",".join(filters) if filters else None
|
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140
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+
|
|
141
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+
|
|
142
|
+
# --- Semantic Scholar -------------------------------------------------------
|
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+
|
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144
|
+
|
|
145
|
+
def _s2_request(query: str, date_filter: dict[str, Any], cap: int) -> str:
|
|
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|
+
params = {
|
|
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|
+
"query": query,
|
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148
|
+
"limit": str(cap),
|
|
149
|
+
"fields": "title,abstract,year,authors,externalIds,publicationTypes,url",
|
|
150
|
+
}
|
|
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|
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from_year, through_year = date_filter["from_year"], date_filter["through_year"]
|
|
152
|
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if from_year is not None or through_year is not None:
|
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+
params["year"] = (
|
|
154
|
+
f"{from_year if from_year is not None else ''}-"
|
|
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|
+
f"{through_year if through_year is not None else ''}"
|
|
156
|
+
)
|
|
157
|
+
return (
|
|
158
|
+
"https://api.semanticscholar.org/graph/v1/paper/search?"
|
|
159
|
+
+ urllib.parse.urlencode(params)
|
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160
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+
)
|
|
161
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+
|
|
162
|
+
|
|
163
|
+
def _s2_parse(body: bytes) -> tuple[int | None, list[dict[str, Any]]]:
|
|
164
|
+
payload = json.loads(body.decode("utf-8"))
|
|
165
|
+
hits = []
|
|
166
|
+
for record in payload["data"]:
|
|
167
|
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external_ids = record.get("externalIds") or {}
|
|
168
|
+
types = record.get("publicationTypes") or []
|
|
169
|
+
hits.append(
|
|
170
|
+
_hit(
|
|
171
|
+
provider_record_id=_clean(record.get("paperId")),
|
|
172
|
+
doi=_clean(external_ids.get("DOI")),
|
|
173
|
+
title=_clean(record.get("title")),
|
|
174
|
+
authors=[
|
|
175
|
+
_name_author(author.get("name"))
|
|
176
|
+
for author in record.get("authors") or []
|
|
177
|
+
],
|
|
178
|
+
year=record.get("year"),
|
|
179
|
+
language=None,
|
|
180
|
+
document_type=_clean(types[0]) if types else None,
|
|
181
|
+
publication_status=_S2_STATUS.get(
|
|
182
|
+
_clean(types[0]) if types else "", "unknown"
|
|
183
|
+
),
|
|
184
|
+
abstract_text=_exact_text(record.get("abstract")),
|
|
185
|
+
landing_url=_clean(record.get("url")),
|
|
186
|
+
raw_record=record,
|
|
187
|
+
)
|
|
188
|
+
)
|
|
189
|
+
return payload.get("total"), hits
|
|
190
|
+
|
|
191
|
+
|
|
192
|
+
# --- OpenAlex ---------------------------------------------------------------
|
|
193
|
+
|
|
194
|
+
|
|
195
|
+
def _openalex_request(query: str, date_filter: dict[str, Any], cap: int) -> str:
|
|
196
|
+
params = {"search": query, "per-page": str(cap)}
|
|
197
|
+
year_filter = _year_filter(
|
|
198
|
+
date_filter, "from_publication_date", "to_publication_date"
|
|
199
|
+
)
|
|
200
|
+
if year_filter:
|
|
201
|
+
params["filter"] = year_filter
|
|
202
|
+
return "https://api.openalex.org/works?" + urllib.parse.urlencode(params)
|
|
203
|
+
|
|
204
|
+
|
|
205
|
+
def _openalex_abstract(inverted: Any) -> str | None:
|
|
206
|
+
if not isinstance(inverted, dict) or not inverted:
|
|
207
|
+
return None
|
|
208
|
+
positions: list[tuple[int, str]] = []
|
|
209
|
+
for word, indexes in inverted.items():
|
|
210
|
+
for index in indexes:
|
|
211
|
+
positions.append((index, word))
|
|
212
|
+
# Reconstruction from the inverted index is derived text, not provider
|
|
213
|
+
# bytes, so whitespace normalization here loses nothing exact.
|
|
214
|
+
return _clean(" ".join(word for _, word in sorted(positions)))
|
|
215
|
+
|
|
216
|
+
|
|
217
|
+
def _openalex_parse(body: bytes) -> tuple[int | None, list[dict[str, Any]]]:
|
|
218
|
+
payload = json.loads(body.decode("utf-8"))
|
|
219
|
+
hits = []
|
|
220
|
+
for record in payload["results"]:
|
|
221
|
+
doi = _clean(record.get("doi"))
|
|
222
|
+
if doi and doi.lower().startswith("https://doi.org/"):
|
|
223
|
+
doi = doi[len("https://doi.org/") :]
|
|
224
|
+
hits.append(
|
|
225
|
+
_hit(
|
|
226
|
+
provider_record_id=_clean(record.get("id")),
|
|
227
|
+
doi=doi,
|
|
228
|
+
title=_clean(record.get("display_name")),
|
|
229
|
+
authors=[
|
|
230
|
+
_name_author((row.get("author") or {}).get("display_name"))
|
|
231
|
+
for row in record.get("authorships") or []
|
|
232
|
+
],
|
|
233
|
+
year=record.get("publication_year"),
|
|
234
|
+
language=_clean(record.get("language")),
|
|
235
|
+
document_type=_clean(record.get("type")),
|
|
236
|
+
publication_status=_OPENALEX_STATUS.get(
|
|
237
|
+
_clean(record.get("type")) or "", "unknown"
|
|
238
|
+
),
|
|
239
|
+
abstract_text=_openalex_abstract(record.get("abstract_inverted_index")),
|
|
240
|
+
landing_url=_clean(record.get("id")),
|
|
241
|
+
raw_record=record,
|
|
242
|
+
)
|
|
243
|
+
)
|
|
244
|
+
return (payload.get("meta") or {}).get("count"), hits
|
|
245
|
+
|
|
246
|
+
|
|
247
|
+
# --- Crossref ---------------------------------------------------------------
|
|
248
|
+
|
|
249
|
+
|
|
250
|
+
def _crossref_request(query: str, date_filter: dict[str, Any], cap: int) -> str:
|
|
251
|
+
params = {"query": query, "rows": str(cap)}
|
|
252
|
+
year_filter = _year_filter(date_filter, "from-pub-date", "until-pub-date")
|
|
253
|
+
if year_filter:
|
|
254
|
+
params["filter"] = year_filter
|
|
255
|
+
return "https://api.crossref.org/works?" + urllib.parse.urlencode(params)
|
|
256
|
+
|
|
257
|
+
|
|
258
|
+
_CROSSREF_STATUS = {"journal-article": "published", "posted-content": "preprint"}
|
|
259
|
+
# Conservative approximations of each provider's type vocabulary; anything
|
|
260
|
+
# outside the mapped set stays "unknown" rather than guessing.
|
|
261
|
+
_OPENALEX_STATUS = {"preprint": "preprint", "article": "published"}
|
|
262
|
+
_S2_STATUS = {"JournalArticle": "published"}
|
|
263
|
+
|
|
264
|
+
|
|
265
|
+
def _crossref_parse(body: bytes) -> tuple[int | None, list[dict[str, Any]]]:
|
|
266
|
+
message = json.loads(body.decode("utf-8"))["message"]
|
|
267
|
+
hits = []
|
|
268
|
+
for record in message["items"]:
|
|
269
|
+
titles = record.get("title") or []
|
|
270
|
+
date_parts = (record.get("issued") or {}).get("date-parts") or [[None]]
|
|
271
|
+
record_type = _clean(record.get("type"))
|
|
272
|
+
hits.append(
|
|
273
|
+
_hit(
|
|
274
|
+
provider_record_id=_clean(record.get("DOI")),
|
|
275
|
+
doi=_clean(record.get("DOI")),
|
|
276
|
+
title=_clean(titles[0]) if titles else None,
|
|
277
|
+
authors=[
|
|
278
|
+
{"family": _clean(row.get("family")), "given": _clean(row.get("given"))}
|
|
279
|
+
for row in record.get("author") or []
|
|
280
|
+
],
|
|
281
|
+
year=date_parts[0][0] if date_parts and date_parts[0] else None,
|
|
282
|
+
language=_clean(record.get("language")),
|
|
283
|
+
document_type=record_type,
|
|
284
|
+
publication_status=_CROSSREF_STATUS.get(record_type or "", "unknown"),
|
|
285
|
+
# Crossref abstracts arrive as JATS-tagged text, retained
|
|
286
|
+
# exactly as returned.
|
|
287
|
+
abstract_text=_exact_text(record.get("abstract")),
|
|
288
|
+
landing_url=_clean(record.get("URL")),
|
|
289
|
+
raw_record=record,
|
|
290
|
+
)
|
|
291
|
+
)
|
|
292
|
+
return message.get("total-results"), hits
|
|
293
|
+
|
|
294
|
+
|
|
295
|
+
# --- arXiv ------------------------------------------------------------------
|
|
296
|
+
|
|
297
|
+
_ATOM = "{http://www.w3.org/2005/Atom}"
|
|
298
|
+
_OPENSEARCH = "{http://a9.com/-/spec/opensearch/1.1/}"
|
|
299
|
+
_ARXIV_NS = "{http://arxiv.org/schemas/atom}"
|
|
300
|
+
|
|
301
|
+
|
|
302
|
+
def _arxiv_request(query: str, date_filter: dict[str, Any], cap: int) -> str:
|
|
303
|
+
if date_filter["from_year"] is not None or date_filter["through_year"] is not None:
|
|
304
|
+
raise UnsupportedQuery("the arXiv API query interface has no year filter")
|
|
305
|
+
if '"' in query:
|
|
306
|
+
raise UnsupportedQuery(
|
|
307
|
+
"a double quote inside the accepted query would change the arXiv "
|
|
308
|
+
"phrase-query grammar; refusing rather than rewriting the query"
|
|
309
|
+
)
|
|
310
|
+
params = {
|
|
311
|
+
"search_query": f'all:"{query}"',
|
|
312
|
+
"start": "0",
|
|
313
|
+
"max_results": str(cap),
|
|
314
|
+
}
|
|
315
|
+
return "https://export.arxiv.org/api/query?" + urllib.parse.urlencode(params)
|
|
316
|
+
|
|
317
|
+
|
|
318
|
+
def _arxiv_parse(body: bytes) -> tuple[int | None, list[dict[str, Any]]]:
|
|
319
|
+
try:
|
|
320
|
+
feed = ElementTree.fromstring(body.decode("utf-8"))
|
|
321
|
+
except ElementTree.ParseError as exc:
|
|
322
|
+
raise MalformedResponse(str(exc)) from exc
|
|
323
|
+
total_node = feed.find(f"{_OPENSEARCH}totalResults")
|
|
324
|
+
total = (
|
|
325
|
+
int(total_node.text)
|
|
326
|
+
if total_node is not None and total_node.text and total_node.text.isdigit()
|
|
327
|
+
else None
|
|
328
|
+
)
|
|
329
|
+
hits = []
|
|
330
|
+
for entry in feed.findall(f"{_ATOM}entry"):
|
|
331
|
+
def _text(tag: str) -> str | None:
|
|
332
|
+
node = entry.find(tag)
|
|
333
|
+
return _clean(node.text) if node is not None else None
|
|
334
|
+
|
|
335
|
+
summary_node = entry.find(f"{_ATOM}summary")
|
|
336
|
+
summary = _exact_text(summary_node.text if summary_node is not None else None)
|
|
337
|
+
published = _text(f"{_ATOM}published") or ""
|
|
338
|
+
year = int(published[:4]) if published[:4].isdigit() else None
|
|
339
|
+
raw_record = {
|
|
340
|
+
"id": _text(f"{_ATOM}id"),
|
|
341
|
+
"title": _text(f"{_ATOM}title"),
|
|
342
|
+
"summary": summary,
|
|
343
|
+
"published": published or None,
|
|
344
|
+
"authors": [
|
|
345
|
+
_clean(node.text)
|
|
346
|
+
for node in entry.findall(f"{_ATOM}author/{_ATOM}name")
|
|
347
|
+
],
|
|
348
|
+
"doi": _text(f"{_ARXIV_NS}doi"),
|
|
349
|
+
}
|
|
350
|
+
hits.append(
|
|
351
|
+
_hit(
|
|
352
|
+
provider_record_id=raw_record["id"],
|
|
353
|
+
doi=raw_record["doi"],
|
|
354
|
+
title=raw_record["title"],
|
|
355
|
+
authors=[_name_author(name) for name in raw_record["authors"]],
|
|
356
|
+
year=year,
|
|
357
|
+
language=None,
|
|
358
|
+
document_type="preprint",
|
|
359
|
+
publication_status="preprint",
|
|
360
|
+
abstract_text=raw_record["summary"],
|
|
361
|
+
landing_url=raw_record["id"],
|
|
362
|
+
raw_record=raw_record,
|
|
363
|
+
)
|
|
364
|
+
)
|
|
365
|
+
return total, hits
|
|
366
|
+
|
|
367
|
+
|
|
368
|
+
# --- Registry ---------------------------------------------------------------
|
|
369
|
+
|
|
370
|
+
_SHARED_PROVIDER_FIELDS = {
|
|
371
|
+
"purpose": "scholarly_discovery",
|
|
372
|
+
"pagination_behavior": (
|
|
373
|
+
"single page up to the per-query cap; no follow-up page is requested"
|
|
374
|
+
),
|
|
375
|
+
"adapter_version": "ars-discovery-0.1",
|
|
376
|
+
"retention_state": "unknown",
|
|
377
|
+
"retention_reference": None,
|
|
378
|
+
}
|
|
379
|
+
|
|
380
|
+
|
|
381
|
+
def _provider(
|
|
382
|
+
index_id: str,
|
|
383
|
+
product_identity: str,
|
|
384
|
+
query_capability: str,
|
|
385
|
+
*,
|
|
386
|
+
abstract_availability: str = "mixed",
|
|
387
|
+
) -> dict[str, Any]:
|
|
388
|
+
return {
|
|
389
|
+
"index_id": index_id,
|
|
390
|
+
"product_identity": product_identity,
|
|
391
|
+
"query_capability": query_capability,
|
|
392
|
+
"abstract_availability": abstract_availability,
|
|
393
|
+
**_SHARED_PROVIDER_FIELDS,
|
|
394
|
+
}
|
|
395
|
+
|
|
396
|
+
|
|
397
|
+
ADAPTERS: dict[str, dict[str, Any]] = {
|
|
398
|
+
"semantic_scholar": {
|
|
399
|
+
"request": _s2_request,
|
|
400
|
+
"parse": _s2_parse,
|
|
401
|
+
"provider": _provider(
|
|
402
|
+
"semantic_scholar",
|
|
403
|
+
"Semantic Scholar Academic Graph API paper search",
|
|
404
|
+
"keyword relevance search over titles and abstracts",
|
|
405
|
+
),
|
|
406
|
+
},
|
|
407
|
+
"openalex": {
|
|
408
|
+
"request": _openalex_request,
|
|
409
|
+
"parse": _openalex_parse,
|
|
410
|
+
"provider": _provider(
|
|
411
|
+
"openalex",
|
|
412
|
+
"OpenAlex works search API",
|
|
413
|
+
"full-text relevance search over work metadata",
|
|
414
|
+
),
|
|
415
|
+
},
|
|
416
|
+
"crossref": {
|
|
417
|
+
"request": _crossref_request,
|
|
418
|
+
"parse": _crossref_parse,
|
|
419
|
+
"provider": _provider(
|
|
420
|
+
"crossref",
|
|
421
|
+
"Crossref REST API works query",
|
|
422
|
+
"bibliographic keyword query over registered works",
|
|
423
|
+
),
|
|
424
|
+
},
|
|
425
|
+
"arxiv": {
|
|
426
|
+
"request": _arxiv_request,
|
|
427
|
+
"parse": _arxiv_parse,
|
|
428
|
+
"provider": _provider(
|
|
429
|
+
"arxiv",
|
|
430
|
+
"arXiv API query interface",
|
|
431
|
+
"phrase search over all preprint fields; no year filter",
|
|
432
|
+
abstract_availability="available_when_returned",
|
|
433
|
+
),
|
|
434
|
+
},
|
|
435
|
+
}
|
|
436
|
+
|
|
437
|
+
|
|
438
|
+
def provider_roster_defaults() -> dict[str, dict[str, Any]]:
|
|
439
|
+
return {
|
|
440
|
+
index_id: dict(adapter["provider"]) for index_id, adapter in ADAPTERS.items()
|
|
441
|
+
}
|
|
442
|
+
|
|
443
|
+
|
|
444
|
+
# --- Transport --------------------------------------------------------------
|
|
445
|
+
|
|
446
|
+
|
|
447
|
+
class _RefuseRedirects(urllib.request.HTTPRedirectHandler):
|
|
448
|
+
"""A redirect can send the consented query to an off-roster host; refuse."""
|
|
449
|
+
|
|
450
|
+
def redirect_request(self, req, fp, code, msg, headers, newurl): # noqa: ANN001
|
|
451
|
+
return None
|
|
452
|
+
|
|
453
|
+
|
|
454
|
+
_OPENER = urllib.request.build_opener(_RefuseRedirects())
|
|
455
|
+
|
|
456
|
+
|
|
457
|
+
def live_transport(url: str, headers: dict[str, str], timeout: float) -> tuple[int, bytes]:
|
|
458
|
+
request = urllib.request.Request(url, headers=headers)
|
|
459
|
+
try:
|
|
460
|
+
with _OPENER.open(request, timeout=timeout) as response:
|
|
461
|
+
body = response.read(MAX_RESPONSE_BYTES + 1)
|
|
462
|
+
if len(body) > MAX_RESPONSE_BYTES:
|
|
463
|
+
raise MalformedResponse("provider body exceeds the bounded read")
|
|
464
|
+
return response.status, body
|
|
465
|
+
except urllib.error.HTTPError as exc:
|
|
466
|
+
# A refused redirect surfaces here as its 3xx code and maps through
|
|
467
|
+
# _status_outcome (3xx falls into the service_unavailable arm).
|
|
468
|
+
return exc.code, exc.read(MAX_RESPONSE_BYTES)
|
|
469
|
+
except urllib.error.URLError as exc:
|
|
470
|
+
if isinstance(exc.reason, TimeoutError):
|
|
471
|
+
raise TimeoutError(str(exc.reason)) from exc
|
|
472
|
+
raise ServiceUnreachable(str(exc.reason)) from exc
|
|
473
|
+
|
|
474
|
+
|
|
475
|
+
def _fixture_transport(path: Path) -> Transport:
|
|
476
|
+
routes = json.loads(path.read_text(encoding="utf-8"))
|
|
477
|
+
|
|
478
|
+
def transport(url: str, headers: dict[str, str], timeout: float) -> tuple[int, bytes]:
|
|
479
|
+
for marker, spec in routes.items():
|
|
480
|
+
if marker in url:
|
|
481
|
+
if spec.get("body_json") is not None:
|
|
482
|
+
body = json.dumps(spec["body_json"]).encode("utf-8")
|
|
483
|
+
elif spec.get("body_base64"):
|
|
484
|
+
body = base64.b64decode(spec["body_base64"])
|
|
485
|
+
else:
|
|
486
|
+
body = b""
|
|
487
|
+
return spec["status"], body
|
|
488
|
+
raise MalformedResponse(f"no fixture route for {url}")
|
|
489
|
+
|
|
490
|
+
return transport
|
|
491
|
+
|
|
492
|
+
|
|
493
|
+
# --- Retrieval --------------------------------------------------------------
|
|
494
|
+
|
|
495
|
+
|
|
496
|
+
def _status_outcome(status: int) -> str | None:
|
|
497
|
+
if status == 200:
|
|
498
|
+
return None
|
|
499
|
+
if status in (401, 403):
|
|
500
|
+
return "authentication_failed"
|
|
501
|
+
if status == 429:
|
|
502
|
+
return "rate_limited"
|
|
503
|
+
if 400 <= status < 500:
|
|
504
|
+
# The provider judged the request itself invalid.
|
|
505
|
+
return "unsupported_query"
|
|
506
|
+
return "service_unavailable"
|
|
507
|
+
|
|
508
|
+
|
|
509
|
+
def _raw_hit_validator():
|
|
510
|
+
schema = json.loads(
|
|
511
|
+
(substrate.SCHEMA_DIR / "retrieval_input.schema.json").read_bytes()
|
|
512
|
+
)
|
|
513
|
+
from jsonschema import Draft202012Validator
|
|
514
|
+
|
|
515
|
+
return Draft202012Validator({"$defs": schema["$defs"], **schema["$defs"]["raw_hit"]})
|
|
516
|
+
|
|
517
|
+
|
|
518
|
+
_ROW_VALIDATOR = None
|
|
519
|
+
|
|
520
|
+
|
|
521
|
+
def _row_text_conforms(row: dict[str, Any]) -> bool:
|
|
522
|
+
checks = [
|
|
523
|
+
row["provider_record_id"] is None
|
|
524
|
+
or substrate.has_visible_semantic_text(
|
|
525
|
+
row["provider_record_id"], allow_symbols=False
|
|
526
|
+
),
|
|
527
|
+
row["title"] is None
|
|
528
|
+
or substrate.has_visible_semantic_text(row["title"], allow_symbols=True),
|
|
529
|
+
row["abstract_text"] is None
|
|
530
|
+
or substrate.has_visible_semantic_text(
|
|
531
|
+
row["abstract_text"], allow_symbols=True
|
|
532
|
+
),
|
|
533
|
+
]
|
|
534
|
+
for author in row["authors"]:
|
|
535
|
+
for field in ("family", "given"):
|
|
536
|
+
checks.append(
|
|
537
|
+
author[field] is None
|
|
538
|
+
or substrate.has_visible_semantic_text(
|
|
539
|
+
author[field], allow_symbols=False
|
|
540
|
+
)
|
|
541
|
+
)
|
|
542
|
+
return all(checks)
|
|
543
|
+
|
|
544
|
+
|
|
545
|
+
def _rows_conform(rows: list[dict[str, Any]]) -> bool:
|
|
546
|
+
global _ROW_VALIDATOR
|
|
547
|
+
if _ROW_VALIDATOR is None:
|
|
548
|
+
_ROW_VALIDATOR = _raw_hit_validator()
|
|
549
|
+
return all(
|
|
550
|
+
_ROW_VALIDATOR.is_valid(row) and _row_text_conforms(row) for row in rows
|
|
551
|
+
)
|
|
552
|
+
|
|
553
|
+
|
|
554
|
+
def _run_attempt(
|
|
555
|
+
adapter: dict[str, Any],
|
|
556
|
+
query: dict[str, Any],
|
|
557
|
+
cap: int,
|
|
558
|
+
transport: Transport,
|
|
559
|
+
) -> tuple[str, int | None, list[dict[str, Any]]]:
|
|
560
|
+
try:
|
|
561
|
+
url = adapter["request"](
|
|
562
|
+
query["accepted_query_text"], query["date_filter"], cap
|
|
563
|
+
)
|
|
564
|
+
except UnsupportedQuery:
|
|
565
|
+
return "unsupported_query", None, []
|
|
566
|
+
try:
|
|
567
|
+
status, body = transport(url, {"User-Agent": USER_AGENT}, TIMEOUT_SECONDS)
|
|
568
|
+
except TimeoutError:
|
|
569
|
+
return "timeout", None, []
|
|
570
|
+
except ServiceUnreachable:
|
|
571
|
+
return "service_unavailable", None, []
|
|
572
|
+
except MalformedResponse:
|
|
573
|
+
return "malformed_response", None, []
|
|
574
|
+
status_outcome = _status_outcome(status)
|
|
575
|
+
if status_outcome is not None:
|
|
576
|
+
return status_outcome, None, []
|
|
577
|
+
try:
|
|
578
|
+
provider_reported_count, provider_hits = adapter["parse"](body)
|
|
579
|
+
except (
|
|
580
|
+
MalformedResponse,
|
|
581
|
+
ValueError,
|
|
582
|
+
KeyError,
|
|
583
|
+
TypeError,
|
|
584
|
+
AttributeError,
|
|
585
|
+
IndexError,
|
|
586
|
+
UnicodeError,
|
|
587
|
+
):
|
|
588
|
+
return "malformed_response", None, []
|
|
589
|
+
return "success", provider_reported_count, provider_hits
|
|
590
|
+
|
|
591
|
+
|
|
592
|
+
def retrieve(plan: dict[str, Any], *, transport: Transport) -> dict[str, Any]:
|
|
593
|
+
# retrieve() re-validates even when the CLI already did: it is a public
|
|
594
|
+
# entry point that must not trust its caller.
|
|
595
|
+
substrate.validate_schema(
|
|
596
|
+
plan, substrate.plan_schema_filename(plan), "query plan"
|
|
597
|
+
)
|
|
598
|
+
substrate.validate_plan(plan)
|
|
599
|
+
for provider in plan["provider_roster"]:
|
|
600
|
+
index_id = provider["index_id"]
|
|
601
|
+
if index_id not in ADAPTERS:
|
|
602
|
+
_fail(f"no discovery adapter exists for index {index_id!r}")
|
|
603
|
+
if provider != ADAPTERS[index_id]["provider"]:
|
|
604
|
+
_fail(
|
|
605
|
+
f"the consented provider block for {index_id!r} does not match "
|
|
606
|
+
"this adapter's declared block; re-consent against "
|
|
607
|
+
"provider_roster_defaults()"
|
|
608
|
+
)
|
|
609
|
+
|
|
610
|
+
cap = plan["caps"]["max_hits_per_query_index"]
|
|
611
|
+
consent_receipt_id = plan["consent"]["consent_receipt_id"]
|
|
612
|
+
attempts: list[dict[str, Any]] = []
|
|
613
|
+
raw_hits: list[dict[str, Any]] = []
|
|
614
|
+
attempt_number = 0
|
|
615
|
+
hit_number = 0
|
|
616
|
+
for query in plan["queries"]:
|
|
617
|
+
for index_id in query["index_targets"]:
|
|
618
|
+
attempt_number += 1
|
|
619
|
+
attempt_id = f"attempt-{attempt_number:03d}"
|
|
620
|
+
started_at = _now()
|
|
621
|
+
outcome, provider_reported_count, provider_hits = _run_attempt(
|
|
622
|
+
ADAPTERS[index_id], query, cap, transport
|
|
623
|
+
)
|
|
624
|
+
completed_at = _now()
|
|
625
|
+
if provider_reported_count is not None and (
|
|
626
|
+
not isinstance(provider_reported_count, int)
|
|
627
|
+
or isinstance(provider_reported_count, bool)
|
|
628
|
+
or provider_reported_count < len(provider_hits)
|
|
629
|
+
):
|
|
630
|
+
outcome, provider_reported_count, provider_hits = (
|
|
631
|
+
"malformed_response",
|
|
632
|
+
None,
|
|
633
|
+
[],
|
|
634
|
+
)
|
|
635
|
+
retained = provider_hits[:cap]
|
|
636
|
+
hit_number_start = hit_number
|
|
637
|
+
attempt_rows: list[dict[str, Any]] = []
|
|
638
|
+
try:
|
|
639
|
+
for rank, hit in enumerate(retained, 1):
|
|
640
|
+
hit_number += 1
|
|
641
|
+
raw_record = hit.pop("raw_record")
|
|
642
|
+
abstract_text = hit["abstract_text"]
|
|
643
|
+
attempt_rows.append(
|
|
644
|
+
{
|
|
645
|
+
"raw_hit_id": f"hit-{hit_number:03d}",
|
|
646
|
+
"probe_id": plan["probe_id"],
|
|
647
|
+
"query_id": query["query_id"],
|
|
648
|
+
"index_id": index_id,
|
|
649
|
+
"attempt_id": attempt_id,
|
|
650
|
+
"provider_rank": rank,
|
|
651
|
+
**hit,
|
|
652
|
+
"abstract_sha256": (
|
|
653
|
+
substrate.text_digest(abstract_text)
|
|
654
|
+
if abstract_text is not None
|
|
655
|
+
else None
|
|
656
|
+
),
|
|
657
|
+
"returned_at": completed_at,
|
|
658
|
+
"raw_metadata_sha256": substrate.digest(raw_record),
|
|
659
|
+
"explicit_version_of_raw_hit_id": None,
|
|
660
|
+
}
|
|
661
|
+
)
|
|
662
|
+
rows_ok = outcome != "success" or _rows_conform(attempt_rows)
|
|
663
|
+
except (ValueError, TypeError, UnicodeError, substrate.LedgerError):
|
|
664
|
+
rows_ok = False
|
|
665
|
+
if outcome == "success" and not rows_ok:
|
|
666
|
+
# A provider-contract violation (overlong field, bad type,
|
|
667
|
+
# undigestible value) poisons only its own attempt, never
|
|
668
|
+
# the whole fleet.
|
|
669
|
+
outcome, provider_reported_count = "malformed_response", None
|
|
670
|
+
provider_hits, retained, attempt_rows = [], [], []
|
|
671
|
+
hit_number = hit_number_start
|
|
672
|
+
raw_hits.extend(attempt_rows)
|
|
673
|
+
attempts.append(
|
|
674
|
+
{
|
|
675
|
+
"attempt_id": attempt_id,
|
|
676
|
+
"query_id": query["query_id"],
|
|
677
|
+
"index_id": index_id,
|
|
678
|
+
"started_at": started_at,
|
|
679
|
+
"completed_at": completed_at,
|
|
680
|
+
"outcome": outcome,
|
|
681
|
+
"provider_reported_count": provider_reported_count,
|
|
682
|
+
"returned_count": len(provider_hits),
|
|
683
|
+
"retained_hit_count": len(retained),
|
|
684
|
+
"truncated_count": len(provider_hits) - len(retained),
|
|
685
|
+
"retry_of_attempt_id": None,
|
|
686
|
+
"retry_authorization_receipt_id": None,
|
|
687
|
+
"consent_receipt_id": consent_receipt_id,
|
|
688
|
+
}
|
|
689
|
+
)
|
|
690
|
+
if len(raw_hits) > plan["caps"]["max_raw_hits"]:
|
|
691
|
+
_fail("retained raw hits exceed the frozen 240-row ceiling")
|
|
692
|
+
retained_input = {
|
|
693
|
+
"schema_version": substrate.INPUT_VERSION,
|
|
694
|
+
"query_plan_sha256": plan["plan_sha256"],
|
|
695
|
+
"attempts": attempts,
|
|
696
|
+
"retry_authorizations": [],
|
|
697
|
+
"raw_hits": raw_hits,
|
|
698
|
+
"researcher_confirmed_version_relations": [],
|
|
699
|
+
"relevance_assessments": [],
|
|
700
|
+
"completed_at": _now(),
|
|
701
|
+
}
|
|
702
|
+
retained_input["retrieval_input_sha256"] = substrate.bound_digest(
|
|
703
|
+
retained_input, "retrieval_input_sha256"
|
|
704
|
+
)
|
|
705
|
+
substrate.validate_schema(
|
|
706
|
+
retained_input, "retrieval_input.schema.json", "retrieval input"
|
|
707
|
+
)
|
|
708
|
+
return retained_input
|
|
709
|
+
|
|
710
|
+
|
|
711
|
+
# --- CLI --------------------------------------------------------------------
|
|
712
|
+
|
|
713
|
+
|
|
714
|
+
def authorized_retrieval_input_path(plan: dict[str, Any]) -> Path:
|
|
715
|
+
"""The only writable output path: derived from the hash-bound consent."""
|
|
716
|
+
return substrate.authorized_export_path(plan, RETRIEVAL_INPUT_SUFFIX)
|
|
717
|
+
|
|
718
|
+
|
|
719
|
+
def main(argv: list[str] | None = None) -> int:
|
|
720
|
+
parser = argparse.ArgumentParser(description=__doc__)
|
|
721
|
+
commands = parser.add_subparsers(dest="command", required=True)
|
|
722
|
+
retrieve_parser = commands.add_parser(
|
|
723
|
+
"retrieve",
|
|
724
|
+
help="run the consented discovery queries and write a retrieval input",
|
|
725
|
+
)
|
|
726
|
+
retrieve_parser.add_argument("--query-plan", type=Path, required=True)
|
|
727
|
+
retrieve_parser.add_argument(
|
|
728
|
+
"--output",
|
|
729
|
+
type=Path,
|
|
730
|
+
required=True,
|
|
731
|
+
help=(
|
|
732
|
+
"must equal the consent's authorized_output_path plus "
|
|
733
|
+
f"'{RETRIEVAL_INPUT_SUFFIX}'; any other path is refused"
|
|
734
|
+
),
|
|
735
|
+
)
|
|
736
|
+
retrieve_parser.add_argument(
|
|
737
|
+
"--transport-fixture",
|
|
738
|
+
default=None,
|
|
739
|
+
help="path to a fixture route file for offline runs; omit for live HTTP",
|
|
740
|
+
)
|
|
741
|
+
args = parser.parse_args(argv)
|
|
742
|
+
try:
|
|
743
|
+
plan = substrate.load_json(args.query_plan)
|
|
744
|
+
substrate.validate_schema(
|
|
745
|
+
plan, substrate.plan_schema_filename(plan), "query plan"
|
|
746
|
+
)
|
|
747
|
+
substrate.validate_plan(plan)
|
|
748
|
+
if plan["consent"]["local_persistence"] != "explicit_local_export":
|
|
749
|
+
_fail(
|
|
750
|
+
"the hash-bound consent says session_only: this CLI refuses to "
|
|
751
|
+
"persist a retrieval input without explicit_local_export consent"
|
|
752
|
+
)
|
|
753
|
+
expected_output = authorized_retrieval_input_path(plan)
|
|
754
|
+
if str(args.output) != str(expected_output):
|
|
755
|
+
_fail(
|
|
756
|
+
"output does not match the hash-bound consent: the retrieval "
|
|
757
|
+
f"input may be written only to {expected_output}"
|
|
758
|
+
)
|
|
759
|
+
if args.output.exists():
|
|
760
|
+
_fail(f"refusing to overwrite existing output {args.output}")
|
|
761
|
+
if args.transport_fixture:
|
|
762
|
+
transport = _fixture_transport(Path(args.transport_fixture))
|
|
763
|
+
else:
|
|
764
|
+
transport = live_transport
|
|
765
|
+
retained = retrieve(plan, transport=transport)
|
|
766
|
+
substrate.write_new_ledger(args.output, retained)
|
|
767
|
+
except (DiscoveryError, substrate.LedgerError, OSError, ValueError) as exc:
|
|
768
|
+
print(f"ERROR: {exc}", file=sys.stderr)
|
|
769
|
+
return 1
|
|
770
|
+
print(
|
|
771
|
+
json.dumps(
|
|
772
|
+
{
|
|
773
|
+
"attempts": len(retained["attempts"]),
|
|
774
|
+
"raw_hits": len(retained["raw_hits"]),
|
|
775
|
+
"retrieval_input_sha256": retained["retrieval_input_sha256"],
|
|
776
|
+
},
|
|
777
|
+
sort_keys=True,
|
|
778
|
+
)
|
|
779
|
+
)
|
|
780
|
+
return 0
|
|
781
|
+
|
|
782
|
+
|
|
783
|
+
if __name__ == "__main__":
|
|
784
|
+
raise SystemExit(main())
|