psyclaw 0.27.22 → 0.28.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +11 -5
- package/dist/apps/panel/index.html +2 -2
- package/dist/src/adapters/pi/extension.js +225 -92
- package/dist/src/adapters/pi/extension.js.map +1 -1
- package/dist/src/agents/import.js +44 -32
- package/dist/src/agents/import.js.map +1 -1
- package/dist/src/analysis/hooks.d.ts +1 -0
- package/dist/src/analysis/hooks.js +20 -1
- package/dist/src/analysis/hooks.js.map +1 -1
- package/dist/src/ars/bridge.d.ts +20 -0
- package/dist/src/ars/bridge.js +132 -0
- package/dist/src/ars/bridge.js.map +1 -0
- package/dist/src/ars/contracts.d.ts +55 -0
- package/dist/src/ars/contracts.js +2 -0
- package/dist/src/ars/contracts.js.map +1 -0
- package/dist/src/ars/panel-plan.d.ts +4 -0
- package/dist/src/ars/panel-plan.js +11 -0
- package/dist/src/ars/panel-plan.js.map +1 -0
- package/dist/src/ars/pi-panel-executor.d.ts +30 -0
- package/dist/src/ars/pi-panel-executor.js +140 -0
- package/dist/src/ars/pi-panel-executor.js.map +1 -0
- package/dist/src/ars/profile.d.ts +36 -0
- package/dist/src/ars/profile.js +119 -0
- package/dist/src/ars/profile.js.map +1 -0
- package/dist/src/ars/re-review.d.ts +22 -0
- package/dist/src/ars/re-review.js +172 -0
- package/dist/src/ars/re-review.js.map +1 -0
- package/dist/src/branding.d.ts +2 -4
- package/dist/src/branding.js +3 -5
- package/dist/src/branding.js.map +1 -1
- package/dist/src/bundled-tools.d.ts +3 -0
- package/dist/src/bundled-tools.js +21 -0
- package/dist/src/bundled-tools.js.map +1 -0
- package/dist/src/chat.js +6 -5
- package/dist/src/chat.js.map +1 -1
- package/dist/src/creation/contracts.d.ts +38 -0
- package/dist/src/creation/contracts.js +2 -0
- package/dist/src/creation/contracts.js.map +1 -0
- package/dist/src/creation/service.d.ts +7 -0
- package/dist/src/creation/service.js +196 -0
- package/dist/src/creation/service.js.map +1 -0
- package/dist/src/index.d.ts +10 -0
- package/dist/src/index.js +10 -0
- package/dist/src/index.js.map +1 -1
- package/dist/src/install/installer.js +32 -10
- package/dist/src/install/installer.js.map +1 -1
- package/dist/src/orchestration/personas.d.ts +15 -0
- package/dist/src/orchestration/personas.js +51 -0
- package/dist/src/orchestration/personas.js.map +1 -0
- package/dist/src/orchestration/pi-executor.d.ts +1 -0
- package/dist/src/orchestration/pi-executor.js +1 -1
- package/dist/src/orchestration/pi-executor.js.map +1 -1
- package/dist/src/panel/extension.js +29 -8
- package/dist/src/panel/extension.js.map +1 -1
- package/dist/src/panel/server.js +14 -5
- package/dist/src/panel/server.js.map +1 -1
- package/dist/src/project/paths.d.ts +3 -0
- package/dist/src/project/paths.js +7 -0
- package/dist/src/project/paths.js.map +1 -1
- package/dist/src/rules/user-rules.d.ts +8 -0
- package/dist/src/rules/user-rules.js +36 -0
- package/dist/src/rules/user-rules.js.map +1 -0
- package/dist/src/skills/contracts.d.ts +4 -4
- package/dist/src/skills/recommended.js +1 -1
- package/dist/src/skills/registry.js +49 -28
- package/dist/src/skills/registry.js.map +1 -1
- package/dist/src/style/cli-ui.js +0 -1
- package/dist/src/style/cli-ui.js.map +1 -1
- package/package.json +14 -3
- package/scripts/rebrand-pi.mjs +6 -0
- package/skills/recommended/catalog.json +2 -11
- package/vendor/ars/.claude/CLAUDE.md +371 -0
- package/vendor/ars/.command-invariants.toml +24 -0
- package/vendor/ars/CITATION.cff +35 -0
- package/vendor/ars/LICENSE +417 -0
- package/vendor/ars/MODE_REGISTRY.md +76 -0
- package/vendor/ars/NOTICE.md +26 -0
- package/vendor/ars/POSITIONING.md +99 -0
- package/vendor/ars/PSYCLAW_SOURCE.json +10 -0
- package/vendor/ars/README.md +751 -0
- package/vendor/ars/SECURITY.md +52 -0
- package/vendor/ars/THIRD_PARTY.md +70 -0
- package/vendor/ars/academic-paper/SKILL.md +542 -0
- package/vendor/ars/academic-paper/agents/abstract_bilingual_agent.md +171 -0
- package/vendor/ars/academic-paper/agents/argument_builder_agent.md +276 -0
- package/vendor/ars/academic-paper/agents/citation_compliance_agent.md +422 -0
- package/vendor/ars/academic-paper/agents/draft_writer_agent.md +656 -0
- package/vendor/ars/academic-paper/agents/formatter_agent.md +999 -0
- package/vendor/ars/academic-paper/agents/intake_agent.md +393 -0
- package/vendor/ars/academic-paper/agents/literature_strategist_agent.md +626 -0
- package/vendor/ars/academic-paper/agents/peer_reviewer_agent.md +516 -0
- package/vendor/ars/academic-paper/agents/revision_coach_agent.md +334 -0
- package/vendor/ars/academic-paper/agents/socratic_mentor_agent.md +527 -0
- package/vendor/ars/academic-paper/agents/structure_architect_agent.md +401 -0
- package/vendor/ars/academic-paper/agents/visualization_agent.md +441 -0
- package/vendor/ars/academic-paper/examples/chinese_paper_example.md +278 -0
- package/vendor/ars/academic-paper/examples/clinical_citation_verification_checklist.md +95 -0
- package/vendor/ars/academic-paper/examples/clinical_epistemic_status_example.md +100 -0
- package/vendor/ars/academic-paper/examples/commitment_ledger_example.md +147 -0
- package/vendor/ars/academic-paper/examples/imrad_hei_example.md +234 -0
- package/vendor/ars/academic-paper/examples/literature_review_example.md +260 -0
- package/vendor/ars/academic-paper/examples/plan_mode_guided_writing.md +600 -0
- package/vendor/ars/academic-paper/examples/revision_mode_example.md +344 -0
- package/vendor/ars/academic-paper/examples/revision_recovery_example.md +506 -0
- package/vendor/ars/academic-paper/examples/version_family_reconciliation_example.md +89 -0
- package/vendor/ars/academic-paper/references/abstract_writing_guide.md +169 -0
- package/vendor/ars/academic-paper/references/academic_writing_style.md +188 -0
- package/vendor/ars/academic-paper/references/anti_leakage_protocol.md +83 -0
- package/vendor/ars/academic-paper/references/apa7_chinese_citation_guide.md +364 -0
- package/vendor/ars/academic-paper/references/apa7_extended_guide.md +198 -0
- package/vendor/ars/academic-paper/references/changelog.md +11 -0
- package/vendor/ars/academic-paper/references/citation_format_switcher.md +228 -0
- package/vendor/ars/academic-paper/references/committee_correspondence_protocol.md +158 -0
- package/vendor/ars/academic-paper/references/credit_authorship_guide.md +308 -0
- package/vendor/ars/academic-paper/references/disclosure_mode_protocol.md +478 -0
- package/vendor/ars/academic-paper/references/domain_evidence_profiles.md +38 -0
- package/vendor/ars/academic-paper/references/failure_paths.md +349 -0
- package/vendor/ars/academic-paper/references/funding_statement_guide.md +319 -0
- package/vendor/ars/academic-paper/references/hei_domain_glossary.md +169 -0
- package/vendor/ars/academic-paper/references/intro_title_rhetoric_guide.md +114 -0
- package/vendor/ars/academic-paper/references/journal_submission_guide.md +249 -0
- package/vendor/ars/academic-paper/references/latex_template_reference.md +378 -0
- package/vendor/ars/academic-paper/references/mode_selection_guide.md +378 -0
- package/vendor/ars/academic-paper/references/paper_structure_patterns.md +330 -0
- package/vendor/ars/academic-paper/references/plan_mode_protocol.md +112 -0
- package/vendor/ars/academic-paper/references/policy_anchor_disclosure_protocol.md +200 -0
- package/vendor/ars/academic-paper/references/policy_anchor_table.md +157 -0
- package/vendor/ars/academic-paper/references/revision_patch_protocol.md +173 -0
- package/vendor/ars/academic-paper/references/statistical_visualization_standards.md +750 -0
- package/vendor/ars/academic-paper/references/venue_disclosure_policies.md +259 -0
- package/vendor/ars/academic-paper/references/vlm_figure_verification.md +126 -0
- package/vendor/ars/academic-paper/references/workflow_phase_details.md +135 -0
- package/vendor/ars/academic-paper/references/writing_judgment_framework.md +59 -0
- package/vendor/ars/academic-paper/references/writing_quality_check.md +173 -0
- package/vendor/ars/academic-paper/templates/bilingual_abstract_template.md +78 -0
- package/vendor/ars/academic-paper/templates/case_study_template.md +129 -0
- package/vendor/ars/academic-paper/templates/conference_paper_template.md +108 -0
- package/vendor/ars/academic-paper/templates/credit_statement_template.md +132 -0
- package/vendor/ars/academic-paper/templates/funding_statement_template.md +290 -0
- package/vendor/ars/academic-paper/templates/imrad_template.md +183 -0
- package/vendor/ars/academic-paper/templates/latex_article_template.tex +199 -0
- package/vendor/ars/academic-paper/templates/literature_review_template.md +135 -0
- package/vendor/ars/academic-paper/templates/policy_brief_template.md +139 -0
- package/vendor/ars/academic-paper/templates/revision_tracking_template.md +199 -0
- package/vendor/ars/academic-paper/templates/theoretical_paper_template.md +119 -0
- package/vendor/ars/academic-paper-reviewer/SKILL.md +491 -0
- package/vendor/ars/academic-paper-reviewer/agents/devils_advocate_reviewer_agent.md +443 -0
- package/vendor/ars/academic-paper-reviewer/agents/domain_reviewer_agent.md +412 -0
- package/vendor/ars/academic-paper-reviewer/agents/editorial_synthesizer_agent.md +478 -0
- package/vendor/ars/academic-paper-reviewer/agents/eic_agent.md +339 -0
- package/vendor/ars/academic-paper-reviewer/agents/field_analyst_agent.md +221 -0
- package/vendor/ars/academic-paper-reviewer/agents/methodology_reviewer_agent.md +449 -0
- package/vendor/ars/academic-paper-reviewer/agents/perspective_reviewer_agent.md +427 -0
- package/vendor/ars/academic-paper-reviewer/examples/hei_paper_review_example.md +391 -0
- package/vendor/ars/academic-paper-reviewer/examples/interdisciplinary_review_example.md +299 -0
- package/vendor/ars/academic-paper-reviewer/examples/subclaim_decomposition_example.md +80 -0
- package/vendor/ars/academic-paper-reviewer/references/calibration_mode_protocol.md +256 -0
- package/vendor/ars/academic-paper-reviewer/references/changelog.md +10 -0
- package/vendor/ars/academic-paper-reviewer/references/editorial_decision_standards.md +236 -0
- package/vendor/ars/academic-paper-reviewer/references/guided_mode_protocol.md +34 -0
- package/vendor/ars/academic-paper-reviewer/references/integration_guide.md +15 -0
- package/vendor/ars/academic-paper-reviewer/references/quality_rubrics.md +84 -0
- package/vendor/ars/academic-paper-reviewer/references/re_review_mode_protocol.md +340 -0
- package/vendor/ars/academic-paper-reviewer/references/review_criteria_framework.md +98 -0
- package/vendor/ars/academic-paper-reviewer/references/review_panel_provenance_protocol.md +197 -0
- package/vendor/ars/academic-paper-reviewer/references/review_quality_thinking.md +58 -0
- package/vendor/ars/academic-paper-reviewer/references/reviewer_sprint_prompt_source.md +324 -0
- package/vendor/ars/academic-paper-reviewer/references/sprint_contract_protocol.md +296 -0
- package/vendor/ars/academic-paper-reviewer/references/statistical_reporting_standards.md +505 -0
- package/vendor/ars/academic-paper-reviewer/references/top_journals_by_field.md +206 -0
- package/vendor/ars/academic-paper-reviewer/templates/editorial_decision_template.md +235 -0
- package/vendor/ars/academic-paper-reviewer/templates/peer_review_report_template.md +305 -0
- package/vendor/ars/academic-paper-reviewer/templates/revision_response_template.md +248 -0
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- package/vendor/ars/academic-pipeline/agents/claim_ref_alignment_audit_agent.md +382 -0
- package/vendor/ars/academic-pipeline/agents/collaboration_depth_agent.md +164 -0
- package/vendor/ars/academic-pipeline/agents/integrity_verification_agent.md +870 -0
- package/vendor/ars/academic-pipeline/agents/pipeline_orchestrator_agent.md +1379 -0
- package/vendor/ars/academic-pipeline/agents/state_tracker_agent.md +622 -0
- package/vendor/ars/academic-pipeline/examples/full_pipeline_example.md +482 -0
- package/vendor/ars/academic-pipeline/examples/integrity_failure_recovery.md +389 -0
- package/vendor/ars/academic-pipeline/examples/mid_entry_example.md +414 -0
- package/vendor/ars/academic-pipeline/references/adapters/.gitkeep +0 -0
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- package/vendor/ars/academic-pipeline/references/ai_research_failure_modes.md +185 -0
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- package/vendor/ars/academic-pipeline/references/claim_audit_calibration_protocol.md +175 -0
- package/vendor/ars/academic-pipeline/references/claim_verification_protocol.md +282 -0
- package/vendor/ars/academic-pipeline/references/external_review_protocol.md +131 -0
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- package/vendor/ars/academic-pipeline/references/passport_as_reset_boundary.md +132 -0
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- package/vendor/ars/academic-pipeline/references/progress_dashboard_template.md +38 -0
- package/vendor/ars/academic-pipeline/references/reinforcement_content.md +15 -0
- package/vendor/ars/academic-pipeline/references/reproducibility_audit.md +55 -0
- package/vendor/ars/academic-pipeline/references/score_trajectory_protocol.md +78 -0
- package/vendor/ars/academic-pipeline/references/team_collaboration_protocol.md +261 -0
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- package/vendor/ars/agents/report_compiler_agent.md +341 -0
- package/vendor/ars/agents/research_architect_agent.md +298 -0
- package/vendor/ars/agents/synthesis_agent.md +356 -0
- package/vendor/ars/commands/ars-3w.md +10 -0
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- package/vendor/ars/shared/contracts/passport/terminal_policies.schema.json +50 -0
- package/vendor/ars/shared/contracts/passport/timeline.schema.json +102 -0
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- package/vendor/ars/shared/contracts/patch/revision_patch.schema.json +250 -0
- package/vendor/ars/shared/contracts/pdf/pdf_content_classifier_diagnostic.schema.json +39 -0
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- package/vendor/ars/shared/contracts/re_review/input_manifest.schema.json +161 -0
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- package/vendor/ars/shared/contracts/re_review/legacy/v1_0/traceability.schema.json +841 -0
- package/vendor/ars/shared/contracts/re_review/legacy/v1_0/verdict_record.schema.json +244 -0
- package/vendor/ars/shared/contracts/re_review/precommitment.schema.json +193 -0
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- package/vendor/ars/shared/contracts/review_target/constructive_review_findings.schema.json +172 -0
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- package/vendor/ars/shared/contracts/review_target/review_criteria_binding_manifest.schema.json +235 -0
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#!/usr/bin/env python3
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"""#439 format_profile contract lint (spec docs/design/2026-06-15-439-format-profile-design.md).
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Guards the scholar-declared layout profile schema (Slice A). The schema is a
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RENDERER input, kept standalone from venue_profile (decision B). This lint pins
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the load-bearing properties so they cannot be silently broken:
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1. The schema is a valid Draft 2020-12 schema, standalone (Invariant 11), and
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locks unknown keys (additionalProperties:false) at the root.
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2. The line_spacing.fixed_pt conditional is intact (required iff mode==fixed_pt,
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forbidden otherwise) — the rule that makes a mis-declared spacing a hard error
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rather than a silently-ignored field.
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3. NO provenance machinery leaked in from venue_profile (no declared_by, no
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*_inferred / *_provenance / *_source fields) — the downgraded declared-only
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rule (§3) is documentation, not an apparatus, and this asserts it stays that way.
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4. The cut fields stay cut (profile_name / heading_font / caption.bold) — the
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no-unrequested-abstraction discipline, enforced.
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5. The committed synthetic example fixture exists and validates against the
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schema (design §6/§8) — keeps the boundary-note artifact from drifting.
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6. The formatter's Format Profile section carries its load-bearing prose rules
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(byte-equivalence guard, fail-closed, no-inference, venue precedence,
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best-effort) — Slice C wiring, guarded by literal-presence like #394.
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7. The intake Step 5 follow-up carries the write-nothing-when-declined rule
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(Invariant 7 byte-equivalence) and the PCR row omission note.
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8. POSITIONING.md records the ship-contract-not-content boundary (#439 §6) —
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the mechanism ships, no specific school's/journal's profile content does.
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Mutation discipline: scripts/test_check_439_format_profile.py proves each check
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fires when its guarded property is broken.
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"""
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from __future__ import annotations
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import json
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import re
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import sys
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from pathlib import Path
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import yaml
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from jsonschema import Draft202012Validator
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if str(Path(__file__).resolve().parent) not in sys.path:
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sys.path.insert(0, str(Path(__file__).resolve().parent))
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from _skill_lint import check_section_literals # noqa: E402
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ROOT = Path(__file__).resolve().parent.parent
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SCHEMA = ROOT / "shared" / "contracts" / "submission" / "format_profile.schema.json"
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EXAMPLE = ROOT / "shared" / "contracts" / "submission" / "format_profile.example.yaml"
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FORMATTER = ROOT / "academic-paper" / "agents" / "formatter_agent.md"
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INTAKE = ROOT / "academic-paper" / "agents" / "intake_agent.md"
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POSITIONING = ROOT / "POSITIONING.md"
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FMT_HEADING = "## Format Profile (#439) — declared layout, NOT-DECLARED → current default"
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# Fields that were deliberately cut (design §4) — must NOT reappear.
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CUT_ROOT_FIELDS = ("profile_name", "heading_font")
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CUT_CAPTION_FIELDS = ("bold",)
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# venue_profile provenance machinery that must NOT carry over (design §3).
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PROVENANCE_MARKERS = ("declared_by", "_inferred", "_provenance", "_source")
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def check_schema_valid(schema: dict) -> list[str]:
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"""Invariant 1: valid Draft 2020-12 schema, root locks unknown keys."""
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errors: list[str] = []
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try:
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Draft202012Validator.check_schema(schema)
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except Exception as exc: # noqa: BLE001 - surface any schema-meta failure
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errors.append(f"format_profile schema is not a valid Draft 2020-12 schema: {exc}")
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if schema.get("additionalProperties") is not False:
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errors.append("format_profile root must set additionalProperties:false")
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if schema.get("type") != "object":
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errors.append("format_profile root type must be 'object'")
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return errors
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def check_fixed_pt_conditional(schema: dict) -> list[str]:
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"""Invariant 2: line_spacing.fixed_pt required iff mode==fixed_pt, else forbidden.
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Verified behaviorally (the conditional must actually reject the bad shapes),
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not by string-matching the allOf — a structural rename would slip past a grep.
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"""
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errors: list[str] = []
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validator = Draft202012Validator(schema)
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def valid(inst: dict) -> bool:
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return not list(validator.iter_errors(inst))
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if not valid({"line_spacing": {"mode": "fixed_pt", "fixed_pt": 20}}):
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errors.append("line_spacing fixed_pt+fixed_pt should be VALID but is rejected")
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if not valid({"line_spacing": {"mode": "double"}}):
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errors.append("line_spacing double (no fixed_pt) should be VALID but is rejected")
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if valid({"line_spacing": {"mode": "double", "fixed_pt": 20}}):
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errors.append("line_spacing double WITH fixed_pt must be INVALID (fixed_pt only with mode==fixed_pt)")
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if valid({"line_spacing": {"mode": "fixed_pt"}}):
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errors.append("line_spacing fixed_pt WITHOUT fixed_pt must be INVALID (fixed_pt required when mode==fixed_pt)")
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if valid({"line_spacing": {"fixed_pt": 20}}):
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errors.append("line_spacing WITHOUT mode must be INVALID (mode is required) — guards against dropping required:[mode]")
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|
96
|
+
return errors
|
|
97
|
+
|
|
98
|
+
|
|
99
|
+
def _all_property_names(schema: dict) -> set[str]:
|
|
100
|
+
"""Recursively collect every declared property NAME in the schema.
|
|
101
|
+
|
|
102
|
+
Structural only — descriptions are NOT walked, so the schema may *mention*
|
|
103
|
+
'declared_by' in prose explaining that it carries no such field without the
|
|
104
|
+
check false-firing on its own documentation.
|
|
105
|
+
|
|
106
|
+
Walks only the applicators this schema actually uses (`properties`, `allOf`,
|
|
107
|
+
`if`/`then`/`else`). If a future edit introduces `anyOf`/`oneOf`/`items`, that
|
|
108
|
+
edit extends this walker in the same change — carrying dead branches now would
|
|
109
|
+
be unrequested generality.
|
|
110
|
+
"""
|
|
111
|
+
names: set[str] = set()
|
|
112
|
+
props = schema.get("properties")
|
|
113
|
+
if isinstance(props, dict):
|
|
114
|
+
for name, subschema in props.items():
|
|
115
|
+
names.add(name)
|
|
116
|
+
if isinstance(subschema, dict):
|
|
117
|
+
names |= _all_property_names(subschema)
|
|
118
|
+
for branch in schema.get("allOf", []):
|
|
119
|
+
if isinstance(branch, dict):
|
|
120
|
+
names |= _all_property_names(branch)
|
|
121
|
+
for key in ("if", "then", "else"):
|
|
122
|
+
branch = schema.get(key)
|
|
123
|
+
if isinstance(branch, dict):
|
|
124
|
+
names |= _all_property_names(branch)
|
|
125
|
+
return names
|
|
126
|
+
|
|
127
|
+
|
|
128
|
+
def check_no_provenance(schema: dict) -> list[str]:
|
|
129
|
+
"""Invariant 3: no venue_profile provenance machinery leaked in (§3 downgrade).
|
|
130
|
+
|
|
131
|
+
Checks property NAMES only (not descriptions): a field whose name is or ends
|
|
132
|
+
with a provenance marker. This catches `declared_by`, `body_font_provenance`,
|
|
133
|
+
`venue_source`, `family_inferred`, while ignoring prose mentions.
|
|
134
|
+
"""
|
|
135
|
+
errors: list[str] = []
|
|
136
|
+
for name in _all_property_names(schema):
|
|
137
|
+
# endswith subsumes exact-equality (declared_by) and catches the realistic
|
|
138
|
+
# suffix leak (body_font_provenance ends with _provenance). The tested cases
|
|
139
|
+
# are exactly these two shapes; an infix-marker rule would be untested scope.
|
|
140
|
+
for marker in PROVENANCE_MARKERS:
|
|
141
|
+
if name.endswith(marker):
|
|
142
|
+
errors.append(
|
|
143
|
+
f"format_profile must NOT carry provenance machinery (field '{name}' "
|
|
144
|
+
f"matches '{marker}') — declared-only is downgraded to documentation, "
|
|
145
|
+
f"not an apparatus (design §3)"
|
|
146
|
+
)
|
|
147
|
+
break
|
|
148
|
+
return errors
|
|
149
|
+
|
|
150
|
+
|
|
151
|
+
def check_cut_fields_stay_cut(schema: dict) -> list[str]:
|
|
152
|
+
"""Invariant 4: deliberately-cut fields must not reappear (design §4)."""
|
|
153
|
+
errors: list[str] = []
|
|
154
|
+
props = schema.get("properties", {})
|
|
155
|
+
for field in CUT_ROOT_FIELDS:
|
|
156
|
+
if field in props:
|
|
157
|
+
errors.append(f"cut field '{field}' reappeared at root (design §4 — no concrete use case)")
|
|
158
|
+
caption_props = props.get("caption", {}).get("properties", {})
|
|
159
|
+
for field in CUT_CAPTION_FIELDS:
|
|
160
|
+
if field in caption_props:
|
|
161
|
+
errors.append(f"cut field 'caption.{field}' reappeared (design §4 — no #436 requirement)")
|
|
162
|
+
return errors
|
|
163
|
+
|
|
164
|
+
|
|
165
|
+
def check_example_fixture(schema: dict) -> list[str]:
|
|
166
|
+
"""Invariant 5: the committed synthetic example validates against the schema (design §6/§8).
|
|
167
|
+
|
|
168
|
+
Pins that the documentation artifact exists and stays schema-valid, so the
|
|
169
|
+
boundary-note fixture (§6: must be synthetic, ships no real school profile)
|
|
170
|
+
cannot silently drift out of contract.
|
|
171
|
+
"""
|
|
172
|
+
if not EXAMPLE.exists():
|
|
173
|
+
return [f"format_profile example fixture not found at {EXAMPLE} (design §6/§8)"]
|
|
174
|
+
try:
|
|
175
|
+
example = yaml.safe_load(EXAMPLE.read_text(encoding="utf-8"))
|
|
176
|
+
except yaml.YAMLError as exc:
|
|
177
|
+
return [f"format_profile example fixture is not valid YAML: {exc}"]
|
|
178
|
+
schema_errors = list(Draft202012Validator(schema).iter_errors(example))
|
|
179
|
+
return [
|
|
180
|
+
f"format_profile example fixture violates the schema: {e.message}"
|
|
181
|
+
for e in schema_errors
|
|
182
|
+
]
|
|
183
|
+
|
|
184
|
+
|
|
185
|
+
def check_formatter_wiring(text: str) -> list[str]:
|
|
186
|
+
"""Invariant 6: the formatter's Format Profile section carries its load-bearing rules.
|
|
187
|
+
|
|
188
|
+
Slice C wiring is prose (LLM-agent behavior), so it is guarded by literal-presence
|
|
189
|
+
the way the #394 formatter advisories are — a refactor that drops the byte-equivalence
|
|
190
|
+
guard, the fail-closed STOP, or the venue-precedence rule fails loudly.
|
|
191
|
+
"""
|
|
192
|
+
return check_section_literals(6, text, FMT_HEADING, "formatter format-profile", {
|
|
193
|
+
"byte-equivalence guard (skip when no row)": "skip this entire section",
|
|
194
|
+
"fail-closed before formatting": "fail closed BEFORE formatting",
|
|
195
|
+
"no-inference rule": "Never infer a missing layout field",
|
|
196
|
+
"venue precedence": "venue compliance wins",
|
|
197
|
+
"best-effort per target": "best-effort per output target",
|
|
198
|
+
})
|
|
199
|
+
|
|
200
|
+
|
|
201
|
+
STEP5_HEADING = "### Step 5: Output Format"
|
|
202
|
+
# The production Paper Configuration Record H2 — matched exactly so the Plan Mode PCR
|
|
203
|
+
# ("## Paper Configuration Record (Plan Mode)", which is exempt and carries no row) and
|
|
204
|
+
# the "### Paper Configuration Record" intro sub-heading are both excluded.
|
|
205
|
+
PCR_HEADING_RE = re.compile(r"^## Paper Configuration Record\s*$", re.MULTILINE)
|
|
206
|
+
# Structural table-row match for the PCR Format Profile row (mirrors check_392's PCR_ROW_RE).
|
|
207
|
+
PCR_FORMAT_ROW_RE = re.compile(r"^\|\s*\*\*Format Profile\*\*\s*\|", re.MULTILINE)
|
|
208
|
+
|
|
209
|
+
|
|
210
|
+
def _h2_block(text: str, heading_re: "re.Pattern[str]") -> str | None:
|
|
211
|
+
"""The block from an H2 heading (located by regex) to the next `## ` heading.
|
|
212
|
+
|
|
213
|
+
Used to scope the production PCR table, matched exactly so the Plan Mode PCR variant
|
|
214
|
+
and the intro sub-heading are excluded.
|
|
215
|
+
"""
|
|
216
|
+
m = heading_re.search(text)
|
|
217
|
+
if m is None:
|
|
218
|
+
return None
|
|
219
|
+
nxt = re.compile(r"^## \S", re.MULTILINE).search(text, m.end())
|
|
220
|
+
return text[m.start() : nxt.start()] if nxt else text[m.start():]
|
|
221
|
+
|
|
222
|
+
|
|
223
|
+
def _step_block(text: str, heading: str) -> str | None:
|
|
224
|
+
"""The block from `heading` to the next heading of <= its level (None if absent).
|
|
225
|
+
|
|
226
|
+
Scopes literal checks to the intake step rather than the whole 330-line file, so a
|
|
227
|
+
rule moved out of Step 5 fails the lint instead of passing on a stray match elsewhere.
|
|
228
|
+
"""
|
|
229
|
+
start = text.find(heading)
|
|
230
|
+
if start < 0:
|
|
231
|
+
return None
|
|
232
|
+
level = heading.split(" ")[0] # e.g. '###'
|
|
233
|
+
pattern = re.compile(rf"^#{{2,{len(level)}}}\s", re.MULTILINE)
|
|
234
|
+
m = pattern.search(text, start + len(heading))
|
|
235
|
+
return text[start : m.start()] if m else text[start:]
|
|
236
|
+
|
|
237
|
+
|
|
238
|
+
def check_intake_wiring(text: str) -> list[str]:
|
|
239
|
+
"""Invariant 7: the intake Step 5 follow-up carries the write-nothing-when-declined rule.
|
|
240
|
+
|
|
241
|
+
Scoped to the Step 5 block (not whole-file substring), so the byte-equivalence rule
|
|
242
|
+
cannot pass the lint after being moved out of the follow-up; the PCR row is asserted
|
|
243
|
+
structurally (a real table row), not by a prose fragment.
|
|
244
|
+
"""
|
|
245
|
+
errors: list[str] = []
|
|
246
|
+
step5 = _step_block(text, STEP5_HEADING)
|
|
247
|
+
if step5 is None or "Format-profile follow-up (#439" not in step5:
|
|
248
|
+
errors.append("intake_agent.md missing the #439 Format-profile follow-up under Step 5")
|
|
249
|
+
return errors
|
|
250
|
+
# the byte-equivalence discipline (declined => no PCR row at all) is load-bearing, in-step
|
|
251
|
+
if "no PCR `Format Profile` row at all" not in step5:
|
|
252
|
+
errors.append(
|
|
253
|
+
"Step 5 follow-up must state a declined run writes NO PCR Format Profile row "
|
|
254
|
+
"(Invariant 7 byte-equivalence — an explicit `absent` would perturb)"
|
|
255
|
+
)
|
|
256
|
+
# the PCR row exists as a real table row, scoped to the production PCR block
|
|
257
|
+
# (not the Plan Mode PCR, and not a stray row elsewhere in the file)
|
|
258
|
+
pcr_block = _h2_block(text, PCR_HEADING_RE)
|
|
259
|
+
if pcr_block is None or not PCR_FORMAT_ROW_RE.search(pcr_block):
|
|
260
|
+
errors.append("production PCR block must carry a structural `| **Format Profile** |` row")
|
|
261
|
+
elif "ROW OMITTED ENTIRELY" not in pcr_block:
|
|
262
|
+
errors.append("PCR Format Profile row must document that it is omitted when declined")
|
|
263
|
+
return errors
|
|
264
|
+
|
|
265
|
+
|
|
266
|
+
def check_positioning_boundary(text: str) -> list[str]:
|
|
267
|
+
"""Invariant 8: POSITIONING.md records the #439 ship-contract-not-content boundary.
|
|
268
|
+
|
|
269
|
+
The boundary (ARS ships the format_profile mechanism, never a specific school's/
|
|
270
|
+
journal's profile content) is otherwise prose-only and unguarded — this pins that it
|
|
271
|
+
stays recorded with its review criterion (design §6 acceptance).
|
|
272
|
+
"""
|
|
273
|
+
errors: list[str] = []
|
|
274
|
+
if "format-profile content" not in text.lower():
|
|
275
|
+
errors.append("POSITIONING.md missing the #439 institutional/journal format-profile boundary note")
|
|
276
|
+
return errors
|
|
277
|
+
if "Review criterion:" not in text or "out-of-tree" not in text:
|
|
278
|
+
errors.append("POSITIONING.md #439 boundary must keep its Review criterion + out-of-tree rule")
|
|
279
|
+
return errors
|
|
280
|
+
|
|
281
|
+
|
|
282
|
+
def main() -> int:
|
|
283
|
+
if not SCHEMA.exists():
|
|
284
|
+
print(f"FAIL: schema not found at {SCHEMA}", file=sys.stderr)
|
|
285
|
+
return 1
|
|
286
|
+
schema = json.loads(SCHEMA.read_text(encoding="utf-8"))
|
|
287
|
+
errors: list[str] = []
|
|
288
|
+
errors += check_schema_valid(schema)
|
|
289
|
+
errors += check_fixed_pt_conditional(schema)
|
|
290
|
+
errors += check_no_provenance(schema)
|
|
291
|
+
errors += check_cut_fields_stay_cut(schema)
|
|
292
|
+
errors += check_example_fixture(schema)
|
|
293
|
+
errors += check_formatter_wiring(FORMATTER.read_text(encoding="utf-8"))
|
|
294
|
+
errors += check_intake_wiring(INTAKE.read_text(encoding="utf-8"))
|
|
295
|
+
errors += check_positioning_boundary(POSITIONING.read_text(encoding="utf-8"))
|
|
296
|
+
|
|
297
|
+
if errors:
|
|
298
|
+
print("#439 format_profile lint FAILED:", file=sys.stderr)
|
|
299
|
+
for e in errors:
|
|
300
|
+
print(f" - {e}", file=sys.stderr)
|
|
301
|
+
return 1
|
|
302
|
+
print("#439 format_profile lint passed (8 invariants).")
|
|
303
|
+
return 0
|
|
304
|
+
|
|
305
|
+
|
|
306
|
+
if __name__ == "__main__":
|
|
307
|
+
raise SystemExit(main())
|
|
@@ -0,0 +1,237 @@
|
|
|
1
|
+
#!/usr/bin/env python3
|
|
2
|
+
"""Fail-closed focused guard for issue #619 disclosure closeout surfaces."""
|
|
3
|
+
from __future__ import annotations
|
|
4
|
+
|
|
5
|
+
import argparse
|
|
6
|
+
import re
|
|
7
|
+
import sys
|
|
8
|
+
from pathlib import Path
|
|
9
|
+
|
|
10
|
+
|
|
11
|
+
PROTOCOL_REL = "academic-paper/references/disclosure_mode_protocol.md"
|
|
12
|
+
POLICIES_REL = "academic-paper/references/venue_disclosure_policies.md"
|
|
13
|
+
AUDIT_REL = "audits/external-contribution-audit-prompt.md"
|
|
14
|
+
|
|
15
|
+
MATRIX_BEGIN = "<!-- 619-frontiers-action-matrix:BEGIN -->"
|
|
16
|
+
MATRIX_END = "<!-- 619-frontiers-action-matrix:END -->"
|
|
17
|
+
EXPECTED_MATRIX = {
|
|
18
|
+
"Created written content": ("REQUIRED", "REQUIRED", "—"),
|
|
19
|
+
"Edited written content": ("—", "REQUIRED", "—"),
|
|
20
|
+
"Produced non-data visual content": ("REQUIRED", "REQUIRED", "—"),
|
|
21
|
+
"Edited non-data visual content": ("—", "REQUIRED", "—"),
|
|
22
|
+
"Produced figure representing manuscript data": (
|
|
23
|
+
"REQUIRED",
|
|
24
|
+
"REQUIRED",
|
|
25
|
+
"REQUIRED",
|
|
26
|
+
),
|
|
27
|
+
"Edited figure representing manuscript data": ("—", "REQUIRED", "REQUIRED"),
|
|
28
|
+
}
|
|
29
|
+
SCENARIO_LABELS = {
|
|
30
|
+
"Created written content": "created text",
|
|
31
|
+
"Edited written content": "edited text",
|
|
32
|
+
"Produced non-data visual content": "non-data visual",
|
|
33
|
+
"Edited non-data visual content": "edited non-data visual",
|
|
34
|
+
"Produced figure representing manuscript data": "data-representing figure",
|
|
35
|
+
"Edited figure representing manuscript data": "edited data-representing figure",
|
|
36
|
+
}
|
|
37
|
+
|
|
38
|
+
|
|
39
|
+
class MissingRequiredFile(RuntimeError):
|
|
40
|
+
pass
|
|
41
|
+
|
|
42
|
+
|
|
43
|
+
def _read(root: Path, rel: str) -> str:
|
|
44
|
+
path = root / rel
|
|
45
|
+
try:
|
|
46
|
+
return path.read_text(encoding="utf-8")
|
|
47
|
+
except FileNotFoundError as exc:
|
|
48
|
+
raise MissingRequiredFile(f"required file missing: {rel}") from exc
|
|
49
|
+
|
|
50
|
+
|
|
51
|
+
def _heading_section(text: str, heading: str) -> str | None:
|
|
52
|
+
lines = text.splitlines()
|
|
53
|
+
try:
|
|
54
|
+
start = lines.index(heading)
|
|
55
|
+
except ValueError:
|
|
56
|
+
return None
|
|
57
|
+
level = len(heading) - len(heading.lstrip("#"))
|
|
58
|
+
end = len(lines)
|
|
59
|
+
for index in range(start + 1, len(lines)):
|
|
60
|
+
line = lines[index]
|
|
61
|
+
if not line.startswith("#"):
|
|
62
|
+
continue
|
|
63
|
+
other_level = len(line) - len(line.lstrip("#"))
|
|
64
|
+
if other_level <= level:
|
|
65
|
+
end = index
|
|
66
|
+
break
|
|
67
|
+
return "\n".join(lines[start:end])
|
|
68
|
+
|
|
69
|
+
|
|
70
|
+
def _venue_section(text: str, venue: str) -> str | None:
|
|
71
|
+
prefix = f"## Venue: {venue}"
|
|
72
|
+
start = next(
|
|
73
|
+
(match.start() for match in re.finditer(r"^## Venue: .+$", text, re.MULTILINE)
|
|
74
|
+
if match.group(0).startswith(prefix)),
|
|
75
|
+
None,
|
|
76
|
+
)
|
|
77
|
+
if start is None:
|
|
78
|
+
return None
|
|
79
|
+
next_heading = text.find("\n## Venue: ", start + 1)
|
|
80
|
+
return text[start:] if next_heading < 0 else text[start:next_heading]
|
|
81
|
+
|
|
82
|
+
|
|
83
|
+
def _field(section: str, name: str) -> str | None:
|
|
84
|
+
prefix = f"| {name} |"
|
|
85
|
+
rows = [line for line in section.splitlines() if line.startswith(prefix)]
|
|
86
|
+
if len(rows) != 1:
|
|
87
|
+
return None
|
|
88
|
+
return rows[0][len(prefix):].removesuffix("|").strip()
|
|
89
|
+
|
|
90
|
+
|
|
91
|
+
def _frontiers_rows(protocol: str) -> tuple[str | None, str | None]:
|
|
92
|
+
phase2a = _heading_section(
|
|
93
|
+
protocol, "### Phase 2a: Decide whether the venue requires a disclosure (#596 venue path)"
|
|
94
|
+
)
|
|
95
|
+
phase2b = _heading_section(
|
|
96
|
+
protocol, "### Phase 2b: Build the venue-required fact ledger (#596 venue path)"
|
|
97
|
+
)
|
|
98
|
+
def row(section: str | None) -> str | None:
|
|
99
|
+
if section is None:
|
|
100
|
+
return None
|
|
101
|
+
rows = [line for line in section.splitlines() if line.startswith("| Frontiers |")]
|
|
102
|
+
return rows[0] if len(rows) == 1 else None
|
|
103
|
+
return row(phase2a), row(phase2b)
|
|
104
|
+
|
|
105
|
+
|
|
106
|
+
def _parse_matrix(protocol: str, errors: list[str]) -> dict[str, tuple[str, ...]]:
|
|
107
|
+
if protocol.count(MATRIX_BEGIN) != 1 or protocol.count(MATRIX_END) != 1:
|
|
108
|
+
errors.append("Frontiers Phase 5 action matrix markers must occur exactly once")
|
|
109
|
+
return {}
|
|
110
|
+
body = protocol.split(MATRIX_BEGIN, 1)[1].split(MATRIX_END, 1)[0]
|
|
111
|
+
rows: dict[str, tuple[str, ...]] = {}
|
|
112
|
+
for line in body.splitlines():
|
|
113
|
+
if not line.startswith("|") or line.startswith("|---") or "Use record" in line:
|
|
114
|
+
continue
|
|
115
|
+
cells = tuple(cell.strip() for cell in line.strip().strip("|").split("|"))
|
|
116
|
+
if len(cells) != 4:
|
|
117
|
+
errors.append(f"Frontiers action matrix malformed row: {line}")
|
|
118
|
+
continue
|
|
119
|
+
if cells[0] in rows:
|
|
120
|
+
errors.append(f"Frontiers action matrix duplicate scenario: {cells[0]}")
|
|
121
|
+
rows[cells[0]] = cells[1:]
|
|
122
|
+
return rows
|
|
123
|
+
|
|
124
|
+
|
|
125
|
+
def check(root: Path) -> list[str]:
|
|
126
|
+
protocol = _read(root, PROTOCOL_REL)
|
|
127
|
+
policies = _read(root, POLICIES_REL)
|
|
128
|
+
audit = _read(root, AUDIT_REL)
|
|
129
|
+
errors: list[str] = []
|
|
130
|
+
|
|
131
|
+
phase2a, phase2b = _frontiers_rows(protocol)
|
|
132
|
+
if phase2a is None or "Phase 5" not in phase2a or "does not halt disclosure rendering" not in phase2a:
|
|
133
|
+
errors.append("Frontiers Phase 2a must route nonblocking quality actions to Phase 5")
|
|
134
|
+
if phase2b is None:
|
|
135
|
+
errors.append("Frontiers Phase 2b ledger row missing or duplicated")
|
|
136
|
+
else:
|
|
137
|
+
forbidden = ("plagiarism-free confirmation before render", "originality/plagiarism-free confirmation", "accurately reflects the data")
|
|
138
|
+
if any(token in phase2b for token in forbidden):
|
|
139
|
+
errors.append("Frontiers Phase 2b regrew a quality-action render gate")
|
|
140
|
+
if "Phase-5 pre-submission actions, not fields required before render" not in phase2b:
|
|
141
|
+
errors.append("Frontiers Phase 2b must identify quality checks as Phase-5 actions")
|
|
142
|
+
|
|
143
|
+
matrix = _parse_matrix(protocol, errors)
|
|
144
|
+
if set(matrix) != set(EXPECTED_MATRIX):
|
|
145
|
+
errors.append("Frontiers action matrix scenario inventory drift")
|
|
146
|
+
for scenario, expected in EXPECTED_MATRIX.items():
|
|
147
|
+
if matrix.get(scenario) != expected:
|
|
148
|
+
errors.append(
|
|
149
|
+
"Frontiers action matrix mapping drift for "
|
|
150
|
+
f"{SCENARIO_LABELS[scenario]}"
|
|
151
|
+
)
|
|
152
|
+
normalized_protocol = " ".join(protocol.split())
|
|
153
|
+
for phrase in (
|
|
154
|
+
"UNKNOWN or false action state is OUTSTANDING",
|
|
155
|
+
"it never becomes a disclosure `UNKNOWN` halt",
|
|
156
|
+
"do not halt or withhold the otherwise complete disclosure",
|
|
157
|
+
):
|
|
158
|
+
if phrase not in normalized_protocol:
|
|
159
|
+
errors.append(f"Frontiers OUTSTANDING semantics missing: {phrase}")
|
|
160
|
+
|
|
161
|
+
frontiers = _venue_section(policies, "Frontiers")
|
|
162
|
+
if frontiers is None:
|
|
163
|
+
errors.append("Frontiers evidence row missing")
|
|
164
|
+
else:
|
|
165
|
+
prohibited = _field(frontiers, "Prohibited uses")
|
|
166
|
+
expected_prohibited = (
|
|
167
|
+
"Listing generative AI as author or co-author. Editors/reviewers "
|
|
168
|
+
"uploading manuscript content to external generative AI tools."
|
|
169
|
+
)
|
|
170
|
+
if prohibited != expected_prohibited:
|
|
171
|
+
errors.append("Frontiers Prohibited uses must contain only the two hard prohibitions")
|
|
172
|
+
notes = _field(frontiers, "Notes") or ""
|
|
173
|
+
for phrase in ("Phase-5 pre-submission checklist", "remains outstanding", "not a disclosure `UNKNOWN` halt"):
|
|
174
|
+
if phrase not in notes:
|
|
175
|
+
errors.append(f"Frontiers evidence action semantics missing: {phrase}")
|
|
176
|
+
|
|
177
|
+
jama = _venue_section(policies, "JAMA")
|
|
178
|
+
if jama is None:
|
|
179
|
+
errors.append("JAMA evidence row missing")
|
|
180
|
+
else:
|
|
181
|
+
access = _field(jama, "Access date") or ""
|
|
182
|
+
notes = _field(jama, "Notes") or ""
|
|
183
|
+
if "cited exact official-URL snapshot is from 2026-07-01" not in access:
|
|
184
|
+
errors.append("JAMA Access date must identify the cited snapshot date")
|
|
185
|
+
gap = (
|
|
186
|
+
"A Piece of My Mind and Poetry drafting clauses were verified on the live "
|
|
187
|
+
"official page on 2026-08-01 and are absent from the cited 2026-07-01 snapshot."
|
|
188
|
+
)
|
|
189
|
+
if gap not in notes:
|
|
190
|
+
errors.append("JAMA live-versus-snapshot evidence gap is not explicit")
|
|
191
|
+
if "No later exact official-URL snapshot was available" not in notes:
|
|
192
|
+
errors.append("JAMA later-snapshot search outcome is not recorded")
|
|
193
|
+
|
|
194
|
+
required_audit_fragments = (
|
|
195
|
+
"PR #599 blind audit head `7bb578d3`",
|
|
196
|
+
"reply/recheck exact head `9e4234ac`",
|
|
197
|
+
"final exact head `559994eb`",
|
|
198
|
+
"codex `gpt-5.6-sol`",
|
|
199
|
+
"| ultra |",
|
|
200
|
+
"Template A: 8 P1 / 6 P2 / 1 P3",
|
|
201
|
+
"first-party re-verification initially confirmed 3 P1",
|
|
202
|
+
"Template B + further recheck: 5 P1 / 7 P2 / 2 P3",
|
|
203
|
+
"docs-only contributor credit over substantive `7bb578d3`",
|
|
204
|
+
"prior findings closed; Frontiers action-carrier reclassified as nonblocking maintainer follow-up",
|
|
205
|
+
)
|
|
206
|
+
for fragment in required_audit_fragments:
|
|
207
|
+
if fragment not in audit:
|
|
208
|
+
errors.append(f"2026-08-01 audit round missing exact receipt: {fragment}")
|
|
209
|
+
old_round = next((line for line in audit.splitlines() if line.startswith("| 2026-07-30 |")), "")
|
|
210
|
+
new_round = next((line for line in audit.splitlines() if line.startswith("| 2026-08-01 |")), "")
|
|
211
|
+
if "`45653587`" not in old_round:
|
|
212
|
+
errors.append("2026-07-30 audit row lost PR #599 head 45653587")
|
|
213
|
+
if "`45653587`" in new_round:
|
|
214
|
+
errors.append("2026-08-01 audit row incorrectly reuses head 45653587")
|
|
215
|
+
|
|
216
|
+
return errors
|
|
217
|
+
|
|
218
|
+
|
|
219
|
+
def main() -> int:
|
|
220
|
+
parser = argparse.ArgumentParser()
|
|
221
|
+
parser.add_argument("--root", type=Path, default=Path(__file__).resolve().parents[1])
|
|
222
|
+
args = parser.parse_args()
|
|
223
|
+
try:
|
|
224
|
+
errors = check(args.root)
|
|
225
|
+
except MissingRequiredFile as exc:
|
|
226
|
+
print(str(exc), file=sys.stderr)
|
|
227
|
+
return 2
|
|
228
|
+
if errors:
|
|
229
|
+
print("#619 disclosure closeout: FAIL", file=sys.stderr)
|
|
230
|
+
print("\n".join(f"- {error}" for error in errors), file=sys.stderr)
|
|
231
|
+
return 1
|
|
232
|
+
print("#619 disclosure closeout: OK")
|
|
233
|
+
return 0
|
|
234
|
+
|
|
235
|
+
|
|
236
|
+
if __name__ == "__main__":
|
|
237
|
+
raise SystemExit(main())
|