opencode-skills-collection 4.0.53 → 4.0.55

package/bundled-skills/scikit-learn/SKILL.md

@@ -6,26 +6,14 @@ metadata:
     skill-author: K-Dense Inc.
 risk: critical
 source: community
+date_added: "2026-09-04"
 ---
 
 # Scikit-learn
 
-## Overview
+## Detailed Guide
 
-This skill provides comprehensive guidance for machine learning tasks using scikit-learn, the industry-standard Python library for classical machine learning. Use this skill for classification, regression, clustering, dimensionality reduction, preprocessing, model evaluation, and building production-ready ML pipelines.
-
-## Installation
-
-```bash
-# Install scikit-learn using uv
-uv uv pip install scikit-learn
-
-# Optional: Install visualization dependencies
-uv uv pip install matplotlib seaborn
-
-# Commonly used with
-uv uv pip install pandas numpy
-```
+Read [the detailed guide](references/detailed-guide.md) before executing this skill. It retains the complete procedure and reference material. Treat its safety, prerequisites, and validation requirements as mandatory. For focused work, load the relevant sections; for end-to-end work, read the guide completely.
 
 ## When to Use This Skill
 
@@ -41,203 +29,6 @@ Use the scikit-learn skill when:
 - Working with both structured (tabular) and text data
 - Need interpretable, classical machine learning approaches
 
-## Quick Start
-
-### Classification Example
-
-```python
-from sklearn.model_selection import train_test_split
-from sklearn.preprocessing import StandardScaler
-from sklearn.ensemble import RandomForestClassifier
-from sklearn.metrics import classification_report
-
-# Split data
-X_train, X_test, y_train, y_test = train_test_split(
-    X, y, test_size=0.2, stratify=y, random_state=42
-)
-
-# Preprocess
-scaler = StandardScaler()
-X_train_scaled = scaler.fit_transform(X_train)
-X_test_scaled = scaler.transform(X_test)
-
-# Train model
-model = RandomForestClassifier(n_estimators=100, random_state=42)
-model.fit(X_train_scaled, y_train)
-
-# Evaluate
-y_pred = model.predict(X_test_scaled)
-print(classification_report(y_test, y_pred))
-```
-
-### Complete Pipeline with Mixed Data
-
-```python
-from sklearn.pipeline import Pipeline
-from sklearn.compose import ColumnTransformer
-from sklearn.preprocessing import StandardScaler, OneHotEncoder
-from sklearn.impute import SimpleImputer
-from sklearn.ensemble import GradientBoostingClassifier
-
-# Define feature types
-numeric_features = ['age', 'income']
-categorical_features = ['gender', 'occupation']
-
-# Create preprocessing pipelines
-numeric_transformer = Pipeline([
-    ('imputer', SimpleImputer(strategy='median')),
-    ('scaler', StandardScaler())
-])
-
-categorical_transformer = Pipeline([
-    ('imputer', SimpleImputer(strategy='most_frequent')),
-    ('onehot', OneHotEncoder(handle_unknown='ignore'))
-])
-
-# Combine transformers
-preprocessor = ColumnTransformer([
-    ('num', numeric_transformer, numeric_features),
-    ('cat', categorical_transformer, categorical_features)
-])
-
-# Full pipeline
-model = Pipeline([
-    ('preprocessor', preprocessor),
-    ('classifier', GradientBoostingClassifier(random_state=42))
-])
-
-# Fit and predict
-model.fit(X_train, y_train)
-y_pred = model.predict(X_test)
-```
-
-## Core Capabilities
-
-### 1. Supervised Learning
-
-Comprehensive algorithms for classification and regression tasks.
-
-**Key algorithms:**
-- **Linear models**: Logistic Regression, Linear Regression, Ridge, Lasso, ElasticNet
-- **Tree-based**: Decision Trees, Random Forest, Gradient Boosting
-- **Support Vector Machines**: SVC, SVR with various kernels
-- **Ensemble methods**: AdaBoost, Voting, Stacking
-- **Neural Networks**: MLPClassifier, MLPRegressor
-- **Others**: Naive Bayes, K-Nearest Neighbors
-
-**When to use:**
-- Classification: Predicting discrete categories (spam detection, image classification, fraud detection)
-- Regression: Predicting continuous values (price prediction, demand forecasting)
-
-**See:** `references/supervised_learning.md` for detailed algorithm documentation, parameters, and usage examples.
-
-### 2. Unsupervised Learning
-
-Discover patterns in unlabeled data through clustering and dimensionality reduction.
-
-**Clustering algorithms:**
-- **Partition-based**: K-Means, MiniBatchKMeans
-- **Density-based**: DBSCAN, HDBSCAN, OPTICS
-- **Hierarchical**: AgglomerativeClustering
-- **Probabilistic**: Gaussian Mixture Models
-- **Others**: MeanShift, SpectralClustering, BIRCH
-
-**Dimensionality reduction:**
-- **Linear**: PCA, TruncatedSVD, NMF
-- **Manifold learning**: t-SNE, UMAP, Isomap, LLE
-- **Feature extraction**: FastICA, LatentDirichletAllocation
-
-**When to use:**
-- Customer segmentation, anomaly detection, data visualization
-- Reducing feature dimensions, exploratory data analysis
-- Topic modeling, image compression
-
-**See:** `references/unsupervised_learning.md` for detailed documentation.
-
-### 3. Model Evaluation and Selection
-
-Tools for robust model evaluation, cross-validation, and hyperparameter tuning.
-
-**Cross-validation strategies:**
-- KFold, StratifiedKFold (classification)
-- TimeSeriesSplit (temporal data)
-- GroupKFold (grouped samples)
-
-**Hyperparameter tuning:**
-- GridSearchCV (exhaustive search)
-- RandomizedSearchCV (random sampling)
-- HalvingGridSearchCV (successive halving)
-
-**Metrics:**
-- **Classification**: accuracy, precision, recall, F1-score, ROC AUC, confusion matrix
-- **Regression**: MSE, RMSE, MAE, R², MAPE
-- **Clustering**: silhouette score, Calinski-Harabasz, Davies-Bouldin
-
-**When to use:**
-- Comparing model performance objectively
-- Finding optimal hyperparameters
-- Preventing overfitting through cross-validation
-- Understanding model behavior with learning curves
-
-**See:** `references/model_evaluation.md` for comprehensive metrics and tuning strategies.
-
-### 4. Data Preprocessing
-
-Transform raw data into formats suitable for machine learning.
-
-**Scaling and normalization:**
-- StandardScaler (zero mean, unit variance)
-- MinMaxScaler (bounded range)
-- RobustScaler (robust to outliers)
-- Normalizer (sample-wise normalization)
-
-**Encoding categorical variables:**
-- OneHotEncoder (nominal categories)
-- OrdinalEncoder (ordered categories)
-- LabelEncoder (target encoding)
-
-**Handling missing values:**
-- SimpleImputer (mean, median, most frequent)
-- KNNImputer (k-nearest neighbors)
-- IterativeImputer (multivariate imputation)
-
-**Feature engineering:**
-- PolynomialFeatures (interaction terms)
-- KBinsDiscretizer (binning)
-- Feature selection (RFE, SelectKBest, SelectFromModel)
-
-**When to use:**
-- Before training any algorithm that requires scaled features (SVM, KNN, Neural Networks)
-- Converting categorical variables to numeric format
-- Handling missing data systematically
-- Creating non-linear features for linear models
-
-**See:** `references/preprocessing.md` for detailed preprocessing techniques.
-
-### 5. Pipelines and Composition
-
-Build reproducible, production-ready ML workflows.
-
-**Key components:**
-- **Pipeline**: Chain transformers and estimators sequentially
-- **ColumnTransformer**: Apply different preprocessing to different columns
-- **FeatureUnion**: Combine multiple transformers in parallel
-- **TransformedTargetRegressor**: Transform target variable
-
-**Benefits:**
-- Prevents data leakage in cross-validation
-- Simplifies code and improves maintainability
-- Enables joint hyperparameter tuning
-- Ensures consistency between training and prediction
-
-**When to use:**
-- Always use Pipelines for production workflows
-- When mixing numerical and categorical features (use ColumnTransformer)
-- When performing cross-validation with preprocessing steps
-- When hyperparameter tuning includes preprocessing parameters
-
-**See:** `references/pipelines_and_composition.md` for comprehensive pipeline patterns.
-
 ## Example Scripts
 
 ### Classification Pipeline
@@ -269,256 +60,6 @@ This script demonstrates:
 - Evaluating clustering quality without ground truth
 - Visualizing results with PCA projection
 
-## Reference Documentation
-
-This skill includes comprehensive reference files for deep dives into specific topics:
-
-### Quick Reference
-**File:** `references/quick_reference.md`
-- Common import patterns and installation instructions
-- Quick workflow templates for common tasks
-- Algorithm selection cheat sheets
-- Common patterns and gotchas
-- Performance optimization tips
-
-### Supervised Learning
-**File:** `references/supervised_learning.md`
-- Linear models (regression and classification)
-- Support Vector Machines
-- Decision Trees and ensemble methods
-- K-Nearest Neighbors, Naive Bayes, Neural Networks
-- Algorithm selection guide
-
-### Unsupervised Learning
-**File:** `references/unsupervised_learning.md`
-- All clustering algorithms with parameters and use cases
-- Dimensionality reduction techniques
-- Outlier and novelty detection
-- Gaussian Mixture Models
-- Method selection guide
-
-### Model Evaluation
-**File:** `references/model_evaluation.md`
-- Cross-validation strategies
-- Hyperparameter tuning methods
-- Classification, regression, and clustering metrics
-- Learning and validation curves
-- Best practices for model selection
-
-### Preprocessing
-**File:** `references/preprocessing.md`
-- Feature scaling and normalization
-- Encoding categorical variables
-- Missing value imputation
-- Feature engineering techniques
-- Custom transformers
-
-### Pipelines and Composition
-**File:** `references/pipelines_and_composition.md`
-- Pipeline construction and usage
-- ColumnTransformer for mixed data types
-- FeatureUnion for parallel transformations
-- Complete end-to-end examples
-- Best practices
-
-## Common Workflows
-
-### Building a Classification Model
-
-1. **Load and explore data**
-   ```python
-   import pandas as pd
-   df = pd.read_csv('data.csv')
-   X = df.drop('target', axis=1)
-   y = df['target']
-   ```
-
-2. **Split data with stratification**
-   ```python
-   from sklearn.model_selection import train_test_split
-   X_train, X_test, y_train, y_test = train_test_split(
-       X, y, test_size=0.2, stratify=y, random_state=42
-   )
-   ```
-
-3. **Create preprocessing pipeline**
-   ```python
-   from sklearn.pipeline import Pipeline
-   from sklearn.preprocessing import StandardScaler
-   from sklearn.compose import ColumnTransformer
-
-   # Handle numeric and categorical features separately
-   preprocessor = ColumnTransformer([
-       ('num', StandardScaler(), numeric_features),
-       ('cat', OneHotEncoder(), categorical_features)
-   ])
-   ```
-
-4. **Build complete pipeline**
-   ```python
-   model = Pipeline([
-       ('preprocessor', preprocessor),
-       ('classifier', RandomForestClassifier(random_state=42))
-   ])
-   ```
-
-5. **Tune hyperparameters**
-   ```python
-   from sklearn.model_selection import GridSearchCV
-
-   param_grid = {
-       'classifier__n_estimators': [100, 200],
-       'classifier__max_depth': [10, 20, None]
-   }
-
-   grid_search = GridSearchCV(model, param_grid, cv=5)
-   grid_search.fit(X_train, y_train)
-   ```
-
-6. **Evaluate on test set**
-   ```python
-   from sklearn.metrics import classification_report
-
-   best_model = grid_search.best_estimator_
-   y_pred = best_model.predict(X_test)
-   print(classification_report(y_test, y_pred))
-   ```
-
-### Performing Clustering Analysis
-
-1. **Preprocess data**
-   ```python
-   from sklearn.preprocessing import StandardScaler
-
-   scaler = StandardScaler()
-   X_scaled = scaler.fit_transform(X)
-   ```
-
-2. **Find optimal number of clusters**
-   ```python
-   from sklearn.cluster import KMeans
-   from sklearn.metrics import silhouette_score
-
-   scores = []
-   for k in range(2, 11):
-       kmeans = KMeans(n_clusters=k, random_state=42)
-       labels = kmeans.fit_predict(X_scaled)
-       scores.append(silhouette_score(X_scaled, labels))
-
-   optimal_k = range(2, 11)[np.argmax(scores)]
-   ```
-
-3. **Apply clustering**
-   ```python
-   model = KMeans(n_clusters=optimal_k, random_state=42)
-   labels = model.fit_predict(X_scaled)
-   ```
-
-4. **Visualize with dimensionality reduction**
-   ```python
-   from sklearn.decomposition import PCA
-
-   pca = PCA(n_components=2)
-   X_2d = pca.fit_transform(X_scaled)
-
-   plt.scatter(X_2d[:, 0], X_2d[:, 1], c=labels, cmap='viridis')
-   ```
-
-## Best Practices
-
-### Always Use Pipelines
-Pipelines prevent data leakage and ensure consistency:
-```python
-# Good: Preprocessing in pipeline
-pipeline = Pipeline([
-    ('scaler', StandardScaler()),
-    ('model', LogisticRegression())
-])
-
-# Bad: Preprocessing outside (can leak information)
-X_scaled = StandardScaler().fit_transform(X)
-```
-
-### Fit on Training Data Only
-Never fit on test data:
-```python
-# Good
-scaler = StandardScaler()
-X_train_scaled = scaler.fit_transform(X_train)
-X_test_scaled = scaler.transform(X_test)  # Only transform
-
-# Bad
-scaler = StandardScaler()
-X_all_scaled = scaler.fit_transform(np.vstack([X_train, X_test]))
-```
-
-### Use Stratified Splitting for Classification
-Preserve class distribution:
-```python
-X_train, X_test, y_train, y_test = train_test_split(
-    X, y, test_size=0.2, stratify=y, random_state=42
-)
-```
-
-### Set Random State for Reproducibility
-```python
-model = RandomForestClassifier(n_estimators=100, random_state=42)
-```
-
-### Choose Appropriate Metrics
-- Balanced data: Accuracy, F1-score
-- Imbalanced data: Precision, Recall, ROC AUC, Balanced Accuracy
-- Cost-sensitive: Define custom scorer
-
-### Scale Features When Required
-Algorithms requiring feature scaling:
-- SVM, KNN, Neural Networks
-- PCA, Linear/Logistic Regression with regularization
-- K-Means clustering
-
-Algorithms not requiring scaling:
-- Tree-based models (Decision Trees, Random Forest, Gradient Boosting)
-- Naive Bayes
-
-## Troubleshooting Common Issues
-
-### ConvergenceWarning
-**Issue:** Model didn't converge
-**Solution:** Increase `max_iter` or scale features
-```python
-model = LogisticRegression(max_iter=1000)
-```
-
-### Poor Performance on Test Set
-**Issue:** Overfitting
-**Solution:** Use regularization, cross-validation, or simpler model
-```python
-# Add regularization
-model = Ridge(alpha=1.0)
-
-# Use cross-validation
-scores = cross_val_score(model, X, y, cv=5)
-```
-
-### Memory Error with Large Datasets
-**Solution:** Use algorithms designed for large data
-```python
-# Use SGD for large datasets
-from sklearn.linear_model import SGDClassifier
-model = SGDClassifier()
-
-# Or MiniBatchKMeans for clustering
-from sklearn.cluster import MiniBatchKMeans
-model = MiniBatchKMeans(n_clusters=8, batch_size=100)
-```
-
-## Additional Resources
-
-- Official Documentation: https://scikit-learn.org/stable/
-- User Guide: https://scikit-learn.org/stable/user_guide.html
-- API Reference: https://scikit-learn.org/stable/api/index.html
-- Examples Gallery: https://scikit-learn.org/stable/auto_examples/index.html
-
 ## Limitations
 - Use this skill only when the task clearly matches the scope described above.
 - Do not treat the output as a substitute for environment-specific validation, testing, or expert review.