molstar 2.3.3 → 2.3.8
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +20 -20
- package/README.md +176 -176
- package/build/viewer/embedded.html +43 -43
- package/build/viewer/index.html +94 -88
- package/build/viewer/molstar.css +1 -2
- package/build/viewer/molstar.js +1 -1
- package/lib/apps/docking-viewer/index.html +36 -36
- package/lib/apps/docking-viewer/index.js +1 -1
- package/lib/apps/docking-viewer/index.js.map +1 -1
- package/lib/apps/viewer/embedded.html +43 -43
- package/lib/apps/viewer/index.d.ts +296 -5
- package/lib/apps/viewer/index.html +94 -88
- package/lib/apps/viewer/index.js +99 -9
- package/lib/apps/viewer/index.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/cli/chem-comp-dict/util.d.ts +4 -4
- package/lib/cli/chem-comp-dict/util.js +2 -2
- package/lib/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/cli/cif2bcif/converter.js +2 -2
- package/lib/cli/cif2bcif/converter.js.map +1 -1
- package/lib/cli/cifschema/index.js +12 -12
- package/lib/cli/cifschema/index.js.map +1 -1
- package/lib/cli/cifschema/util/cif-dic.js +19 -19
- package/lib/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/cli/cifschema/util/generate.js +21 -21
- package/lib/cli/cifschema/util/generate.js.map +1 -1
- package/lib/cli/cifschema/util/schema.js +1 -1
- package/lib/cli/cifschema/util/schema.js.map +1 -1
- package/lib/cli/lipid-params/index.js +3 -3
- package/lib/cli/lipid-params/index.js.map +1 -1
- package/lib/cli/state-docs/index.js +4 -4
- package/lib/cli/state-docs/index.js.map +1 -1
- package/lib/cli/state-docs/pd-to-md.js +10 -10
- package/lib/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/cli/structure-info/model.js +18 -18
- package/lib/cli/structure-info/model.js.map +1 -1
- package/lib/cli/structure-info/volume.js +1 -1
- package/lib/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js.map +1 -1
- package/lib/commonjs/apps/docking-viewer/viewport.d.ts +2 -2
- package/lib/commonjs/apps/viewer/index.d.ts +296 -5
- package/lib/commonjs/apps/viewer/index.js +99 -9
- package/lib/commonjs/apps/viewer/index.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/commonjs/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/util.d.ts +6 -6
- package/lib/commonjs/cli/chem-comp-dict/util.js +2 -2
- package/lib/commonjs/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/commonjs/cli/cif2bcif/converter.js +2 -2
- package/lib/commonjs/cli/cif2bcif/converter.js.map +1 -1
- package/lib/commonjs/cli/cif2bcif/index.js +0 -0
- package/lib/commonjs/cli/cifschema/index.js +12 -12
- package/lib/commonjs/cli/cifschema/index.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/cif-dic.js +19 -19
- package/lib/commonjs/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/generate.js +21 -21
- package/lib/commonjs/cli/cifschema/util/generate.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js.map +1 -1
- package/lib/commonjs/cli/lipid-params/index.js +3 -3
- package/lib/commonjs/cli/lipid-params/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/index.js +4 -4
- package/lib/commonjs/cli/state-docs/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/pd-to-md.js +10 -10
- package/lib/commonjs/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/commonjs/cli/structure-info/model.js +18 -18
- package/lib/commonjs/cli/structure-info/model.js.map +1 -1
- package/lib/commonjs/cli/structure-info/volume.js +1 -1
- package/lib/commonjs/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/examples/basic-wrapper/superposition.js +3 -3
- package/lib/commonjs/examples/basic-wrapper/superposition.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/mapping.js +2 -2
- package/lib/commonjs/examples/domain-annotation-server/mapping.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/server.js +3 -3
- package/lib/commonjs/examples/domain-annotation-server/server.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js +3 -3
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/index.js +2 -2
- package/lib/commonjs/examples/proteopedia-wrapper/index.js.map +1 -1
- package/lib/commonjs/examples/task.js +6 -6
- package/lib/commonjs/examples/task.js.map +1 -1
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js +2 -2
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js.map +1 -1
- package/lib/commonjs/extensions/anvil/behavior.d.ts +2 -2
- package/lib/commonjs/extensions/anvil/representation.d.ts +5 -5
- package/lib/commonjs/extensions/anvil/representation.js +1 -1
- package/lib/commonjs/extensions/anvil/representation.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/color/generate.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/color/generate.js +1 -1
- package/lib/commonjs/extensions/cellpack/color/provided.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/color/provided.js +1 -1
- package/lib/commonjs/extensions/cellpack/curve.d.ts +2 -2
- package/lib/commonjs/extensions/cellpack/curve.js +2 -2
- package/lib/commonjs/extensions/cellpack/data.d.ts +32 -0
- package/lib/commonjs/extensions/cellpack/index.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/index.js +1 -1
- package/lib/commonjs/extensions/cellpack/model.d.ts +5 -3
- package/lib/commonjs/extensions/cellpack/model.js +203 -65
- package/lib/commonjs/extensions/cellpack/model.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/preset.d.ts +2 -1
- package/lib/commonjs/extensions/cellpack/preset.js +12 -15
- package/lib/commonjs/extensions/cellpack/preset.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/property.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/property.js +1 -1
- package/lib/commonjs/extensions/cellpack/representation.d.ts +53 -0
- package/lib/commonjs/extensions/cellpack/representation.js +47 -0
- package/lib/commonjs/extensions/cellpack/representation.js.map +1 -0
- package/lib/commonjs/extensions/cellpack/state.d.ts +16 -5
- package/lib/commonjs/extensions/cellpack/state.js +234 -27
- package/lib/commonjs/extensions/cellpack/state.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/util.d.ts +3 -1
- package/lib/commonjs/extensions/cellpack/util.js +34 -6
- package/lib/commonjs/extensions/cellpack/util.js.map +1 -1
- package/lib/commonjs/extensions/dnatco/confal-pyramids/behavior.d.ts +1 -1
- package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +6 -6
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js +7 -7
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js.map +1 -1
- package/lib/commonjs/extensions/g3d/data.js +2 -2
- package/lib/commonjs/extensions/g3d/data.js.map +1 -1
- package/lib/commonjs/extensions/g3d/model.js +2 -2
- package/lib/commonjs/extensions/g3d/model.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/controls.js +2 -2
- package/lib/commonjs/extensions/geo-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/glb-exporter.js +1 -1
- package/lib/commonjs/extensions/geo-export/glb-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/mesh-exporter.d.ts +1 -1
- package/lib/commonjs/extensions/geo-export/obj-exporter.js +3 -3
- package/lib/commonjs/extensions/geo-export/obj-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js +5 -5
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js.map +1 -1
- package/lib/commonjs/extensions/mp4-export/controls.js +1 -1
- package/lib/commonjs/extensions/mp4-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +6 -6
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js +3 -3
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.d.ts +12 -12
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js +7 -7
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.d.ts +3 -3
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js +11 -11
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +25 -10
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js +4 -4
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/camera/util.d.ts +4 -3
- package/lib/commonjs/mol-canvas3d/camera/util.js +15 -16
- package/lib/commonjs/mol-canvas3d/camera/util.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/camera.d.ts +11 -3
- package/lib/commonjs/mol-canvas3d/camera.js +21 -1
- package/lib/commonjs/mol-canvas3d/camera.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +18 -8
- package/lib/commonjs/mol-canvas3d/canvas3d.js +11 -5
- package/lib/commonjs/mol-canvas3d/canvas3d.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/controls/trackball.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +3 -3
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +1 -1
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js +1 -1
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/helper/interaction-events.d.ts +13 -4
- package/lib/commonjs/mol-canvas3d/helper/interaction-events.js +43 -9
- package/lib/commonjs/mol-canvas3d/helper/interaction-events.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/draw.js +1 -0
- package/lib/commonjs/mol-canvas3d/passes/draw.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/image.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/passes/pick.d.ts +5 -2
- package/lib/commonjs/mol-canvas3d/passes/pick.js +17 -3
- package/lib/commonjs/mol-canvas3d/passes/pick.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/wboit.js +1 -1
- package/lib/commonjs/mol-canvas3d/passes/wboit.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/util.js +1 -1
- package/lib/commonjs/mol-canvas3d/util.js.map +1 -1
- package/lib/commonjs/mol-data/db/table.js +1 -1
- package/lib/commonjs/mol-data/db/table.js.map +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js.map +1 -1
- package/lib/commonjs/mol-data/int/impl/ordered-set.d.ts +3 -3
- package/lib/commonjs/mol-data/int/impl/sorted-array.d.ts +1 -1
- package/lib/commonjs/mol-data/int/impl/sorted-array.js +2 -2
- package/lib/commonjs/mol-data/int/impl/sorted-array.js.map +1 -1
- package/lib/commonjs/mol-data/int/tuple.js +1 -1
- package/lib/commonjs/mol-data/int/tuple.js.map +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/base.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js +10 -1
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/image/image.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/image/image.js +4 -1
- package/lib/commonjs/mol-geo/geometry/image/image.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/lines/lines.js +1 -1
- package/lib/commonjs/mol-geo/geometry/lines/lines.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.js +19 -11
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.d.ts +2 -2
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js +57 -15
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/points/points.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/points/points.js +1 -1
- package/lib/commonjs/mol-geo/geometry/points/points.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +2 -1
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js +1 -1
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/text/text.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/text/text.js +1 -1
- package/lib/commonjs/mol-geo/geometry/text/text.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +6 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js.map +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/cylinders.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/cylinders.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/cylinders.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/direct-volume.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/direct-volume.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/direct-volume.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/gl.d.ts +9 -0
- package/lib/commonjs/mol-gl/_spec/gl.js +33 -0
- package/lib/commonjs/mol-gl/_spec/gl.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/gl.shim.js +5 -5
- package/lib/commonjs/mol-gl/_spec/gl.shim.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/image.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/image.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/image.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/lines.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/lines.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/lines.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/mesh.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/mesh.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/mesh.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/points.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/points.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/points.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/renderer.spec.d.ts +7 -1
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js +6 -44
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/spheres.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/spheres.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/spheres.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/text.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/text.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/text.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/compute/grid3d.js +3 -3
- package/lib/commonjs/mol-gl/compute/grid3d.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js +4 -4
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js.map +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js.map +1 -1
- package/lib/commonjs/mol-gl/renderer.d.ts +3 -2
- package/lib/commonjs/mol-gl/renderer.js +3 -0
- package/lib/commonjs/mol-gl/renderer.js.map +1 -1
- package/lib/commonjs/mol-gl/scene.js +1 -1
- package/lib/commonjs/mol-gl/scene.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/lines.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/lines.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader/lines.vert.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/points.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/points.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader/points.vert.js.map +1 -1
- package/lib/commonjs/mol-gl/shader-code.js +8 -8
- package/lib/commonjs/mol-gl/shader-code.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/buffer.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/buffer.js +5 -5
- package/lib/commonjs/mol-gl/webgl/buffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/compat.js +3 -3
- package/lib/commonjs/mol-gl/webgl/compat.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/context.js +6 -4
- package/lib/commonjs/mol-gl/webgl/context.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/program.d.ts +1 -1
- package/lib/commonjs/mol-gl/webgl/program.js +14 -12
- package/lib/commonjs/mol-gl/webgl/program.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/render-item.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/render-item.js +6 -3
- package/lib/commonjs/mol-gl/webgl/render-item.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/resources.js +1 -1
- package/lib/commonjs/mol-gl/webgl/resources.js.map +1 -1
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1
|
+
{"version":3,"file":"refine.js","sourceRoot":"","sources":["../../../../src/mol-model-props/computed/interactions/refine.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAIH,OAAO,EAAE,IAAI,EAAa,MAAM,8BAA8B,CAAC;AAC/D,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAC;AAStC,MAAM,UAAU,kBAAkB,CAAC,SAAoB,EAAE,YAA0B;IACvE,IAAA,QAAQ,GAAmC,YAAY,SAA/C,EAAE,aAAa,GAAoB,YAAY,cAAhC,EAAE,aAAa,GAAK,YAAY,cAAjB,CAAkB;IAEhE,IAAM,eAAe,GAAqB;QACtC,kBAAkB,CAAC,SAAS,EAAE,YAAY,CAAC;QAC3C,wBAAwB,CAAC,SAAS,EAAE,YAAY,CAAC;QACjD,iBAAiB,CAAC,SAAS,EAAE,YAAY,CAAC;QAC1C,iBAAiB,CAAC,SAAS,EAAE,YAAY,CAAC;QAC1C,wBAAwB,CAAC,SAAS,EAAE,YAAY,CAAC;KACpD,CAAC;IAEF,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,QAAQ,CAAC,SAAS,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;QAClD,IAAM,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;QAC5B,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAgB,CAAC;QACzD,IAAM,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAgB,CAAC;QAEzD,IAAM,KAAK,GAAG,QAAQ,CAAC,IAAI,CAAC,SAAS,EAAE,EAAE,EAAE,aAAa,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC;QACvE,KAAK,CAAC,OAAO,GAAG,CAAC,CAAC,MAAM,CAAC;QACzB,IAAM,KAAK,GAAG,QAAQ,CAAC,IAAI,CAAC,SAAS,EAAE,EAAE,EAAE,aAAa,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC;QACvE,KAAK,CAAC,OAAO,GAAG,CAAC,CAAC,MAAM,CAAC;QAEzB,KAAsB,UAAe,EAAf,mCAAe,EAAf,6BAAe,EAAf,IAAe,EAAE;YAAlC,IAAM,OAAO,wBAAA;YACd,IAAI,OAAO,CAAC,YAAY,CAAC,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC;gBAAE,OAAO,CAAC,kBAAkB,CAAC,CAAC,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;SACvF;KACJ;IAED,EAAE;IAEF,IAAM,MAAM,GAAG,aAAa,CAAC,IAAI,EAAE,CAAC;IAEpC,OAAO,IAAI,EAAE;QACH,IAAA,KAAkB,MAAM,CAAC,IAAI,EAAE,EAA7B,IAAI,UAAA,EAAE,KAAK,WAAkB,CAAC;QACtC,IAAI,IAAI;YAAE,MAAM;QAEhB,IAAM,UAAQ,GAAG,aAAa,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;QAC1C,IAAM,QAAQ,GAAG,aAAa,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;QAC1C,IAAM,IAAI,GAAG,SAAS,CAAC,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;QAC1C,IAAI,CAAC,IAAI,CAAC,QAAQ,CAAC,IAAI,CAAC;YAAE,SAAS;QAEnC,IAAM,KAAK,GAAG,QAAQ,CAAC,IAAI,CAAC,SAAS,EAAE,IAAI,EAAE,QAAQ,CAAC,CAAC;QACvD,IAAM,KAAK,GAAG,QAAQ,CAAC,IAAI,CAAC,SAAS,EAAE,IAAI,EAAE,QAAQ,CAAC,CAAC;QAEvD,KAAsB,UAAe,EAAf,mCAAe,EAAf,6BAAe,EAAf,IAAe;YAAhC,IAAM,OAAO,wBAAA;YAAqB,OAAO,CAAC,SAAS,CAAC,IAAI,EAAE,UAAQ,EAAE,QAAQ,CAAC,CAAC;SAAA;QAEnF,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,UAAQ,CAAC,SAAS,GAAG,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;YACtD,KAAK,CAAC,OAAO,GAAG,UAAQ,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;YAC9B,KAAK,CAAC,OAAO,GAAG,UAAQ,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;YAC9B,+CAA+C;YAE/C,KAAsB,UAAe,EAAf,mCAAe,EAAf,6BAAe,EAAf,IAAe,EAAE;gBAAlC,IAAM,OAAO,wBAAA;gBACd,IAAI,OAAO,CAAC,YAAY,CAAC,UAAQ,CAAC,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;oBAAE,OAAO,CAAC,kBAAkB,CAAC,CAAC,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;aACrG;SACJ;KACJ;AACL,CAAC;AAED;;;GAGG;AACH,SAAS,kBAAkB,CAAC,SAAoB,EAAE,YAA0B;IAChE,IAAA,QAAQ,GAAK,YAAY,SAAjB,CAAkB;IAElC,gDAAgD;IAChD,IAAM,oBAAoB,GAAG,UAAU,IAAY,EAAE,IAAY,EAAE,GAAW,EAAE,GAAkC,EAAE,GAAwB;QAClI,IAAA,KAAsB,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,QAAQ,EAAE,CAAC,CAAC,CAAC,EAAnD,OAAO,QAAA,EAAE,QAAQ,QAAkC,CAAC;QAC3D,IAAI,IAAI,GAAG,OAAO,EAAE;YAChB,IAAI,QAAQ,KAAK,CAAC,CAAC;gBAAE,GAAG,CAAC,QAAQ,CAAC,CAAC;YACnC,GAAG,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC,CAAC;SAC9B;aAAM;YACH,GAAG,CAAC,IAAI,CAAC,CAAC;SACb;IACL,CAAC,CAAC;IAEF,SAAS,UAAU,CAAC,IAAY,EAAE,KAAoB,EAAE,KAAoB,EAAE,GAAkC,EAAE,GAAwB;QACtI,IAAM,QAAQ,GAAG,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QAC7D,IAAM,QAAQ,GAAG,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QAC7D,IAAM,QAAQ,GAAG,KAAK,CAAC,IAAI,CAAC,eAAe,CAAC,QAAQ,CAAC,CAAC;QACtD,IAAM,QAAQ,GAAG,KAAK,CAAC,IAAI,CAAC,eAAe,CAAC,QAAQ,CAAC,CAAC;QAEtD,IAAM,IAAI,GAAG,UAAG,QAAQ,cAAI,KAAK,CAAC,IAAI,CAAC,EAAE,cAAI,QAAQ,cAAI,KAAK,CAAC,IAAI,CAAC,EAAE,OAAI,CAAC;QAC3E,IAAM,IAAI,GAAG,UAAG,QAAQ,cAAI,KAAK,CAAC,IAAI,CAAC,EAAE,cAAI,QAAQ,cAAI,KAAK,CAAC,IAAI,CAAC,EAAE,OAAI,CAAC;QAE3E,IAAM,IAAI,GAAG,QAAQ,CAAC,QAAQ,CAAC,KAAK,EAAE,KAAK,CAAC,CAAC;QAE7C,oBAAoB,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,EAAE,GAAG,CAAC,CAAC;QACjD,oBAAoB,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,EAAE,GAAG,CAAC,CAAC;IACrD,CAAC;IAED,IAAM,eAAe,GAAG,IAAI,GAAG,EAA4B,CAAC;IAC5D,IAAM,gBAAgB,GAAG,UAAC,CAAS,IAAK,OAAA,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,IAAI,mBAA2B,EAAvD,CAAuD,CAAC;IAEhG,IAAI,eAA8C,CAAC;IACnD,IAAI,gBAAqC,CAAC;IAE1C,OAAO;QACH,YAAY,EAAE,UAAC,IAAqB,IAAK,OAAA,IAAI,wBAAgC,EAApC,CAAoC;QAC7E,kBAAkB,EAAE,UAAC,KAAa,EAAE,KAAoB,EAAE,KAAoB;YAC1E,UAAU,CAAC,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,eAAe,EAAE,gBAAgB,CAAC,CAAC;QACvE,CAAC;QACD,SAAS,EAAE,UAAC,IAAiB,EAAE,QAAmC,EAAE,QAAkB;YAClF,eAAe,GAAG,IAAI,GAAG,EAA4B,CAAC;YACtD,gBAAgB,GAAG,UAAC,CAAS,IAAK,OAAA,QAAQ,CAAC,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,mBAA2B,EAArD,CAAqD,CAAC;QAC5F,CAAC;QACD,kBAAkB,EAAE,UAAC,KAAa,EAAE,KAAoB,EAAE,KAAoB;YAC1E,UAAU,CAAC,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,eAAe,EAAE,gBAAgB,CAAC,CAAC;QACvE,CAAC;KACJ,CAAC;AACN,CAAC;AAED;;;GAGG;AACH,SAAS,wBAAwB,CAAC,SAAoB,EAAE,YAA0B;IACtE,IAAA,QAAQ,GAAK,YAAY,SAAjB,CAAkB;IAElC,IAAM,eAAe,GAAG,UAAC,KAAoB,EAAE,KAAoB;QAC/D,IAAM,GAAG,GAAG,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,OAAO,CAAC,8BAAkC,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC;QAEzF,cAAc;QACd,IAAM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@@ -13,10 +13,13 @@ export declare const InteractionsInterUnitParams: {
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13
13
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linkScale: PD.Numeric;
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14
14
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linkSpacing: PD.Numeric;
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15
15
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linkCap: PD.BooleanParam;
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16
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+
aromaticScale: PD.Numeric;
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17
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+
aromaticSpacing: PD.Numeric;
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18
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+
aromaticDashCount: PD.Numeric;
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16
19
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dashCap: PD.BooleanParam;
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17
20
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stubCap: PD.BooleanParam;
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18
21
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radialSegments: PD.Numeric;
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19
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-
unitKinds: PD.MultiSelect<"spheres" | "
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22
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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20
23
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doubleSided: PD.BooleanParam;
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21
24
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flipSided: PD.BooleanParam;
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22
25
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flatShaded: PD.BooleanParam;
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@@ -13,10 +13,13 @@ export declare const InteractionsIntraUnitParams: {
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13
13
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linkScale: PD.Numeric;
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14
14
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linkSpacing: PD.Numeric;
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15
15
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linkCap: PD.BooleanParam;
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16
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+
aromaticScale: PD.Numeric;
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17
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+
aromaticSpacing: PD.Numeric;
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18
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+
aromaticDashCount: PD.Numeric;
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16
19
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dashCap: PD.BooleanParam;
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17
20
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stubCap: PD.BooleanParam;
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18
21
|
radialSegments: PD.Numeric;
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19
|
-
unitKinds: PD.MultiSelect<"spheres" | "
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22
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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20
23
|
doubleSided: PD.BooleanParam;
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|
21
24
|
flipSided: PD.BooleanParam;
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|
22
25
|
flatShaded: PD.BooleanParam;
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@@ -9,7 +9,7 @@ import { ThemeRegistryContext } from '../../../mol-theme/theme';
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9
9
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import { Structure } from '../../../mol-model/structure';
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10
10
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import { StructureRepresentation, StructureRepresentationProvider } from '../../../mol-repr/structure/representation';
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11
11
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export declare const InteractionsParams: {
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12
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-
unitKinds: PD.MultiSelect<"spheres" | "
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12
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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13
13
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sizeFactor: PD.Numeric;
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14
14
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visuals: PD.MultiSelect<"intra-unit" | "inter-unit">;
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15
15
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dashCount: PD.Numeric;
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@@ -18,6 +18,9 @@ export declare const InteractionsParams: {
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18
18
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linkScale: PD.Numeric;
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19
19
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linkSpacing: PD.Numeric;
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20
20
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linkCap: PD.BooleanParam;
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21
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+
aromaticScale: PD.Numeric;
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22
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+
aromaticSpacing: PD.Numeric;
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23
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+
aromaticDashCount: PD.Numeric;
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21
24
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dashCap: PD.BooleanParam;
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22
25
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stubCap: PD.BooleanParam;
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23
26
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radialSegments: PD.Numeric;
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@@ -31,7 +34,7 @@ export declare const InteractionsParams: {
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31
34
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};
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32
35
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export declare type InteractionsParams = typeof InteractionsParams;
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33
36
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export declare function getInteractionParams(ctx: ThemeRegistryContext, structure: Structure): {
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34
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-
unitKinds: PD.MultiSelect<"spheres" | "
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37
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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35
38
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sizeFactor: PD.Numeric;
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36
39
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visuals: PD.MultiSelect<"intra-unit" | "inter-unit">;
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37
40
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dashCount: PD.Numeric;
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@@ -40,6 +43,9 @@ export declare function getInteractionParams(ctx: ThemeRegistryContext, structur
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40
43
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linkScale: PD.Numeric;
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41
44
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linkSpacing: PD.Numeric;
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42
45
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linkCap: PD.BooleanParam;
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46
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+
aromaticScale: PD.Numeric;
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47
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+
aromaticSpacing: PD.Numeric;
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48
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+
aromaticDashCount: PD.Numeric;
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43
49
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dashCap: PD.BooleanParam;
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44
50
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stubCap: PD.BooleanParam;
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45
51
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radialSegments: PD.Numeric;
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@@ -54,7 +60,7 @@ export declare function getInteractionParams(ctx: ThemeRegistryContext, structur
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54
60
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export declare type InteractionRepresentation = StructureRepresentation<InteractionsParams>;
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55
61
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export declare function InteractionRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, InteractionsParams>): InteractionRepresentation;
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|
56
62
|
export declare const InteractionsRepresentationProvider: StructureRepresentationProvider<{
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57
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-
unitKinds: PD.MultiSelect<"spheres" | "
|
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63
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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58
64
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sizeFactor: PD.Numeric;
|
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59
65
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visuals: PD.MultiSelect<"intra-unit" | "inter-unit">;
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|
60
66
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dashCount: PD.Numeric;
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@@ -63,6 +69,9 @@ export declare const InteractionsRepresentationProvider: StructureRepresentation
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63
69
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linkScale: PD.Numeric;
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|
64
70
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linkSpacing: PD.Numeric;
|
|
65
71
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linkCap: PD.BooleanParam;
|
|
72
|
+
aromaticScale: PD.Numeric;
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|
73
|
+
aromaticSpacing: PD.Numeric;
|
|
74
|
+
aromaticDashCount: PD.Numeric;
|
|
66
75
|
dashCap: PD.BooleanParam;
|
|
67
76
|
stubCap: PD.BooleanParam;
|
|
68
77
|
radialSegments: PD.Numeric;
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@@ -64,7 +64,7 @@ var CrossLinkRestraint;
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64
64
|
CrossLinkRestraint.areLocationsEqual = areLocationsEqual;
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|
65
65
|
function _label(crossLinkRestraints, element) {
|
|
66
66
|
var p = crossLinkRestraints.pairs[element];
|
|
67
|
-
return "Cross Link Restraint | Type: "
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|
67
|
+
return "Cross Link Restraint | Type: ".concat(p.restraintType, " | Threshold: ").concat(p.distanceThreshold, " \u212B | Psi: ").concat(p.psi, " | Sigma 1: ").concat(p.sigma1, " | Sigma 2: ").concat(p.sigma2, " | Distance: ").concat(distance(p).toFixed(2), " \u212B");
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68
68
|
}
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|
69
69
|
function locationLabel(location) {
|
|
70
70
|
return _label(location.data.crossLinkRestraints, location.element);
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@@ -1 +1 @@
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1
|
-
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|
|
1
|
+
{"version":3,"file":"property.js","sourceRoot":"","sources":["../../../../src/mol-model-props/integrative/cross-link-restraint/property.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,uBAAuB,EAAE,MAAM,UAAU,CAAC;AACnD,OAAO,EAAqC,IAAI,EAAE,MAAM,8BAA8B,CAAC;AACvF,OAAO,EAAE,cAAc,EAAiB,MAAM,oBAAoB,CAAC;AACnE,OAAO,EAAE,uBAAuB,EAAE,MAAM,wCAAwC,CAAC;AAEjF,OAAO,EAAE,YAAY,EAAE,MAAM,6BAA6B,CAAC;AAC3D,OAAO,EAAE,QAAQ,EAAE,MAAM,yBAAyB,CAAC;AAEnD,OAAO,EAAE,cAAc,EAAE,MAAM,4CAA4C,CAAC;AAC5E,OAAO,EAAE,SAAS,EAAE,MAAM,0BAA0B,CAAC;AACrD,OAAO,EAAE,IAAI,EAAE,MAAM,kCAAkC,CAAC;AACxD,OAAO,EAAE,wBAAwB,EAAE,MAAM,oCAAoC,CAAC;AAI9E,MAAM,CAAC,IAAM,0BAA0B,GAAkE,uBAAuB,CAAC,cAAc,CAAC;IAC5I,KAAK,EAAE,sBAAsB;IAC7B,UAAU,EAAE,wBAAwB,CAAC;QACjC,IAAI,EAAE,kCAAkC;QACxC,gCAAgC;KACnC,CAAC;IACF,IAAI,EAAE,OAAO;IACb,aAAa,EAAE,EAAE;IACjB,SAAS,EAAE,UAAC,IAAe,IAAK,OAAA,CAAC,EAAE,CAAC,EAAJ,CAAI;IACpC,YAAY,EAAE,UAAC,IAAe,IAAK,OAAA,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,uBAAuB,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAzC,CAAyC,CAAC,EAAhE,CAAgE;IACnG,MAAM,EAAE,UAAO,GAA2B,EAAE,IAAe,EAAE,KAAkB;;YAC3E,sBAAO,EAAE,KAAK,EAAE,0BAA0B,CAAC,IAAI,CAAC,EAAE,EAAC;;SACtD;CACJ,CAAC,CAAC;AAEH,OAAO,EAAE,kBAAkB,EAAE,CAAC;AAU9B,IAAU,kBAAkB,CA2E3B;AA3ED,WAAU,kBAAkB;IACxB,IAAY,GAEX;IAFD,WAAY,GAAG;QACX,kDAA2C,CAAA;IAC/C,CAAC,EAFW,GAAG,GAAH,sBAAG,KAAH,sBAAG,QAEd;IAED,SAAgB,YAAY,CAAC,SAAoB;QAC7C,OAAO,SAAS,CAAC,MAAM,CAAC,IAAI,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,uBAAuB,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAzC,CAAyC,CAAC,CAAC;IACjF,CAAC;IAFe,+BAAY,eAE3B,CAAA;IAED,IAAM,QAAQ,GAAG,IAAI,EAAE,EAAE,QAAQ,GAAG,IAAI,EAAE,CAAC;IAC3C,SAAgB,QAAQ,CAAC,IAAwB;QAC7C,IAAI,CAAC,KAAK,CAAC,YAAY,CAAC,QAAQ,CAAC,IAAI,CAAC,KAAK,CAAC,QAAQ,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,QAAQ,CAAC,CAAC;QAC7E,IAAI,CAAC,KAAK,CAAC,YAAY,CAAC,QAAQ,CAAC,IAAI,CAAC,KAAK,CAAC,QAAQ,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,QAAQ,CAAC,CAAC;QAC7E,OAAO,IAAI,CAAC,QAAQ,CAAC,QAAQ,EAAE,QAAQ,CAAC,CAAC;IAC7C,CAAC;IAJe,2BAAQ,WAIvB,CAAA;IAOD,SAAgB,QAAQ,CAAC,mBAA4C,EAAE,SAAoB,EAAE,KAAc;QACvG,OAAO,YAAY,CAAC,uBAAuB,EAAE,EAAE,SAAS,WAAA,EAAE,mBAAmB,qBAAA,EAAE,EAAE,KAAY,CAAC,CAAC;IACnG,CAAC;IAFe,2BAAQ,WAEvB,CAAA;IAED,SAAgB,UAAU,CAAC,CAAM;QAC7B,OAAO,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,IAAI,KAAK,eAAe,IAAI,CAAC,CAAC,GAAG,KAAK,uBAAuB,CAAC;IAClF,CAAC;IAFe,6BAAU,aAEzB,CAAA;IAED,SAAgB,iBAAiB,CAAC,IAAc,EAAE,IAAc;QAC5D,OAAO,CACH,IAAI,CAAC,IAAI,CAAC,SAAS,KAAK,IAAI,CAAC,IAAI,CAAC,SAAS;YAC3C,IAAI,CAAC,IAAI,CAAC,mBAAmB,KAAK,IAAI,CAAC,IAAI,CAAC,mBAAmB;YAC/D,IAAI,CAAC,OAAO,KAAK,IAAI,CAAC,OAAO,CAChC,CAAC;IACN,CAAC;IANe,oCAAiB,oBAMhC,CAAA;IAED,SAAS,MAAM,CAAC,mBAA4C,EAAE,OAAgB;QAC1E,IAAM,CAAC,GAAG,mBAAmB,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;QAC7C,OAAO,uCAAgC,CAAC,CAAC,aAAa,2BAAiB,CAAC,CAAC,iBAAiB,4BAAkB,CAAC,CAAC,GAAG,yBAAe,CAAC,CAAC,MAAM,yBAAe,CAAC,CAAC,MAAM,0BAAgB,QAAQ,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,YAAS,CAAC;IACnN,CAAC;IAED,SAAgB,aAAa,CAAC,QAAkB;QAC5C,OAAO,MAAM,CAAC,QAAQ,CAAC,IAAI,CAAC,mBAAmB,EAAE,QAAQ,CAAC,OAAO,CAAC,CAAC;IACvE,CAAC;IAFe,gCAAa,gBAE5B,CAAA;IAID,SAAgB,IAAI,CAAC,SAAoB,EAAE,mBAA4C,EAAE,QAAgC;QACrH,OAAO,QAAQ,CAAC,uBAAuB,EAAE,EAAE,SAAS,WAAA,EAAE,mBAAmB,qBAAA,EAAE,EAAE,QAAQ,EACjF,UAAC,cAAc,IAAK,OAAA,iBAAiB,CAAC,mBAAmB,EAAE,QAAQ,EAAE,cAAc,CAAC,EAAhE,CAAgE,EACpF,cAAM,OAAA,QAAQ,CAAC,SAAS,EAAE,mBAAmB,EAAE,QAAQ,CAAC,EAAlD,CAAkD,CAAC,CAAC;IAClE,CAAC;IAJe,uBAAI,OAInB,CAAA;IAED,SAAgB,MAAM,CAAC,CAAM;QACzB,OAAO,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,IAAI,KAAK,WAAW,IAAI,CAAC,CAAC,GAAG,KAAK,cAAc,CAAC;IACrE,CAAC;IAFe,yBAAM,SAErB,CAAA;IAED,SAAgB,iBAAiB,CAAC,mBAA4C,EAAE,QAAgC,EAAE,cAAwB;QACtI,OAAO,cAAc,CAAC,gBAAgB,CAAC,QAAQ,CAAC,MAAM,EAAE,UAAC,CAAC,EAAE,EAAE,EAAE,EAAE;YAC9D,IAAM,CAAC,GAAG,mBAAmB,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC;YACjD,CAAC,CAAC,KAAK,CAAC,YAAY,CAAC,QAAQ,CAAC,CAAC,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,EAAE,EAAE,CAAC,CAAC;YAC9D,CAAC,CAAC,KAAK,CAAC,YAAY,CAAC,QAAQ,CAAC,CAAC,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,EAAE,EAAE,CAAC,CAAC;QAClE,CAAC,EAAE,cAAc,CAAC,CAAC;IACvB,CAAC;IANe,oCAAiB,oBAMhC,CAAA;IAED,SAAgB,QAAQ,CAAC,SAAoB,EAAE,mBAA4C,EAAE,QAAgC;QACzH,IAAM,OAAO,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAC;QAC5B,IAAI,OAAO,KAAK,SAAS;YAAE,OAAO,EAAE,CAAC;QACrC,IAAM,CAAC,GAAG,mBAAmB,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;QAC7C,OAAO;YACH,MAAM,CAAC,mBAAmB,EAAE,OAAO,CAAC;YACpC,SAAS,CAAC,IAAI,CAAC,QAAQ,CAAC,SAAS,EAAE,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,SAAS,EAAE,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,MAAM,CAAC,CAAC;SACvF,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;IACpB,CAAC;IARe,2BAAQ,WAQvB,CAAA;AACL,CAAC,EA3ES,kBAAkB,KAAlB,kBAAkB,QA2E3B;AAED,EAAE;AAEF,SAAS,cAAc,CAAC,GAAwB,EAAE,IAAU,EAAE,UAAmC;IACrF,IAAA,QAAQ,GAAK,IAAI,SAAT,CAAU;IAC1B,IAAM,YAAY,GAAG,QAAQ,CAAC,MAAM,CAAC;IACrC,IAAM,IAAI,GAAG,IAAI,CAAC,IAAI,CAAC;4BAEd,CAAC;QACN,IAAM,CAAC,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAC;QACtB,UAAU,CAAC,mBAAmB,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC,OAAO,CAAC,UAAA,EAAE,IAAI,OAAA,GAAG,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC,CAAC,EAAd,CAAc,CAAC,CAAC;;IAF1E,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,YAAY,EAAE,CAAC,EAAE;gBAA5B,CAAC;KAGT;AACL,CAAC;AAED,SAAS,YAAY,CAAC,KAA2B,EAAE,KAAW,EAAE,KAAW;IACvE,IAAI,KAAK,CAAC,KAAK,KAAK,KAAK,CAAC,KAAK;QAAE,OAAO;IACxC,IAAI,KAAK,CAAC,KAAK,CAAC,UAAU,CAAC,IAAI,KAAK,OAAO;QAAE,OAAO;IAEpD,IAAM,UAAU,GAAG,uBAAuB,CAAC,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC;IACrE,IAAI,CAAC,UAAU;QAAE,OAAO;IAExB,IAAM,EAAE,GAAG,IAAI,GAAG,EAAsC,CAAC;IACzD,IAAM,EAAE,GAAG,IAAI,GAAG,EAAsC,CAAC;IACzD,cAAc,CAAC,EAAE,EAAE,KAAK,EAAE,UAAU,CAAC,CAAC;IACtC,cAAc,CAAC,EAAE,EAAE,KAAK,EAAE,UAAU,CAAC,CAAC;IAEtC,EAAE,CAAC,OAAO,CAAC,UAAC,MAAM,EAAE,EAAE;QAClB,IAAM,MAAM,GAAG,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;QAC1B,IAAI,MAAM,KAAK,SAAS,EAAE;YACtB,KAAK,CAAC,IAAI,CACN,wBAAwB,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,UAAU,EAAE,EAAE,CAAC,EACtE,wBAAwB,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,UAAU,EAAE,EAAE,CAAC,CACzE,CAAC;SACL;IACL,CAAC,CAAC,CAAC;AACP,CAAC;AAED,SAAS,YAAY,CAAC,KAA2B,EAAE,IAAU;IACzD,IAAI,IAAI,CAAC,KAAK,CAAC,UAAU,CAAC,IAAI,KAAK,OAAO;QAAE,OAAO;IAEnD,IAAM,UAAU,GAAG,uBAAuB,CAAC,QAAQ,CAAC,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IACpE,IAAI,CAAC,UAAU;QAAE,OAAO;IAEhB,IAAA,QAAQ,GAAK,IAAI,SAAT,CAAU;IAC1B,IAAM,YAAY,GAAG,QAAQ,CAAC,MAAM,CAAC;IACrC,IAAM,IAAI,GAAG,IAAI,CAAC,IAAI,CAAC;IAEvB,IAAM,CAAC,GAAG,IAAI,GAAG,EAAwC,CAAC;4BAEjD,CAAC;QACN,IAAM,CAAC,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAC;QACtB,UAAU,CAAC,mBAAmB,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC,OAAO,CAAC,UAAA,EAAE;YAC9C,IAAM,EAAE,GAAG,CAAC,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;YACrB,IAAI,EAAE;gBAAE,EAAE,CAAC,IAAI,CAAC,CAA+B,CAAC,CAAC;;gBAC5C,CAAC,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC,CAA+B,CAAC,CAAC,CAAC;QACtD,CAAC,CAAC,CAAC;;IANP,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,YAAY,EAAE,CAAC,EAAE;gBAA5B,CAAC;KAOT;IAED,CAAC,CAAC,OAAO,CAAC,UAAC,EAAE,EAAE,EAAE;QACb,IAAI,EAAE,CAAC,MAAM,GAAG,CAAC;YAAE,OAAO;QACnB,IAAA,MAAM,GAAY,EAAE,GAAd,EAAE,MAAM,GAAI,EAAE,GAAN,CAAO;QAC5B,KAAK,CAAC,IAAI,CACN,wBAAwB,CAAC,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,UAAU,EAAE,EAAE,CAAC,EACpE,wBAAwB,CAAC,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,UAAU,EAAE,EAAE,CAAC,CACvE,CAAC;IACN,CAAC,CAAC,CAAC;AACP,CAAC;AAED,SAAS,wBAAwB,CAAC,KAAW,EAAE,MAAkC,EAAE,KAAW,EAAE,MAAkC,EAAE,UAAmC,EAAE,GAAW;IAChL,OAAO;QACH,KAAK,OAAA;QAAE,MAAM,QAAA;QAAE,KAAK,OAAA;QAAE,MAAM,QAAA;QAE5B,aAAa,EAAE,UAAU,CAAC,IAAI,CAAC,cAAc,CAAC,KAAK,CAAC,GAAG,CAAC;QACxD,iBAAiB,EAAE,UAAU,CAAC,IAAI,CAAC,kBAAkB,CAAC,KAAK,CAAC,GAAG,CAAC;QAChE,GAAG,EAAE,UAAU,CAAC,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,GAAG,CAAC;QACnC,MAAM,EAAE,UAAU,CAAC,IAAI,CAAC,OAAO,CAAC,KAAK,CAAC,GAAG,CAAC;QAC1C,MAAM,EAAE,UAAU,CAAC,IAAI,CAAC,OAAO,CAAC,KAAK,CAAC,GAAG,CAAC;KAC7C,CAAC;AACN,CAAC;AAED,SAAS,0BAA0B,CAAC,SAAoB;IACpD,IAAM,KAAK,GAAyB,EAAE,CAAC;IACvC,IAAI,CAAC,SAAS,CAAC,MAAM,CAAC,IAAI,CAAC,UAAA,CAAC,IAAI,OAAA,uBAAuB,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAvC,CAAuC,CAAC,EAAE;QACtE,OAAO,IAAI,cAAc,CAAC,KAAK,CAAC,CAAC;KACpC;IAED,IAAM,CAAC,GAAG,SAAS,CAAC,KAAK,CAAC,MAAM,CAAC;IACjC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC,EAAE;QACxB,IAAM,KAAK,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;QACjC,YAAY,CAAC,KAAK,EAAE,KAAK,CAAC,CAAC;QAC3B,KAAK,IAAI,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC,EAAE;YAC5B,IAAM,KAAK,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;YACjC,IAAI,KAAK,CAAC,KAAK,KAAK,KAAK,CAAC,KAAK,EAAE;gBAC7B,YAAY,CAAC,KAAK,EAAE,KAAK,EAAE,KAAK,CAAC,CAAC;aACrC;SACJ;KACJ;IAED,OAAO,IAAI,cAAc,CAAC,KAAK,CAAC,CAAC;AACrC,CAAC"}
|
|
@@ -15,12 +15,15 @@ export declare const CrossLinkRestraintCylinderParams: {
|
|
|
15
15
|
linkScale: PD.Numeric;
|
|
16
16
|
linkSpacing: PD.Numeric;
|
|
17
17
|
linkCap: PD.BooleanParam;
|
|
18
|
+
aromaticScale: PD.Numeric;
|
|
19
|
+
aromaticSpacing: PD.Numeric;
|
|
20
|
+
aromaticDashCount: PD.Numeric;
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|
18
21
|
dashCount: PD.Numeric;
|
|
19
22
|
dashScale: PD.Numeric;
|
|
20
23
|
dashCap: PD.BooleanParam;
|
|
21
24
|
stubCap: PD.BooleanParam;
|
|
22
25
|
radialSegments: PD.Numeric;
|
|
23
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
26
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
24
27
|
includeParent: PD.BooleanParam;
|
|
25
28
|
doubleSided: PD.BooleanParam;
|
|
26
29
|
flipSided: PD.BooleanParam;
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|
@@ -37,12 +40,15 @@ export declare const CrossLinkRestraintParams: {
|
|
|
37
40
|
linkScale: PD.Numeric;
|
|
38
41
|
linkSpacing: PD.Numeric;
|
|
39
42
|
linkCap: PD.BooleanParam;
|
|
43
|
+
aromaticScale: PD.Numeric;
|
|
44
|
+
aromaticSpacing: PD.Numeric;
|
|
45
|
+
aromaticDashCount: PD.Numeric;
|
|
40
46
|
dashCount: PD.Numeric;
|
|
41
47
|
dashScale: PD.Numeric;
|
|
42
48
|
dashCap: PD.BooleanParam;
|
|
43
49
|
stubCap: PD.BooleanParam;
|
|
44
50
|
radialSegments: PD.Numeric;
|
|
45
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
51
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
46
52
|
includeParent: PD.BooleanParam;
|
|
47
53
|
doubleSided: PD.BooleanParam;
|
|
48
54
|
flipSided: PD.BooleanParam;
|
|
@@ -58,12 +64,15 @@ export declare function getCrossLinkRestraintParams(ctx: ThemeRegistryContext, s
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|
58
64
|
linkScale: PD.Numeric;
|
|
59
65
|
linkSpacing: PD.Numeric;
|
|
60
66
|
linkCap: PD.BooleanParam;
|
|
67
|
+
aromaticScale: PD.Numeric;
|
|
68
|
+
aromaticSpacing: PD.Numeric;
|
|
69
|
+
aromaticDashCount: PD.Numeric;
|
|
61
70
|
dashCount: PD.Numeric;
|
|
62
71
|
dashScale: PD.Numeric;
|
|
63
72
|
dashCap: PD.BooleanParam;
|
|
64
73
|
stubCap: PD.BooleanParam;
|
|
65
74
|
radialSegments: PD.Numeric;
|
|
66
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
75
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
67
76
|
includeParent: PD.BooleanParam;
|
|
68
77
|
doubleSided: PD.BooleanParam;
|
|
69
78
|
flipSided: PD.BooleanParam;
|
|
@@ -80,12 +89,15 @@ export declare const CrossLinkRestraintRepresentationProvider: StructureRepresen
|
|
|
80
89
|
linkScale: PD.Numeric;
|
|
81
90
|
linkSpacing: PD.Numeric;
|
|
82
91
|
linkCap: PD.BooleanParam;
|
|
92
|
+
aromaticScale: PD.Numeric;
|
|
93
|
+
aromaticSpacing: PD.Numeric;
|
|
94
|
+
aromaticDashCount: PD.Numeric;
|
|
83
95
|
dashCount: PD.Numeric;
|
|
84
96
|
dashScale: PD.Numeric;
|
|
85
97
|
dashCap: PD.BooleanParam;
|
|
86
98
|
stubCap: PD.BooleanParam;
|
|
87
99
|
radialSegments: PD.Numeric;
|
|
88
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
100
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
89
101
|
includeParent: PD.BooleanParam;
|
|
90
102
|
doubleSided: PD.BooleanParam;
|
|
91
103
|
flipSided: PD.BooleanParam;
|
|
@@ -5,7 +5,7 @@
|
|
|
5
5
|
*/
|
|
6
6
|
var emptyArray = [];
|
|
7
7
|
function getPairKey(indexA, unitA, indexB, unitB) {
|
|
8
|
-
return indexA
|
|
8
|
+
return "".concat(indexA, "|").concat(unitA.id, "|").concat(indexB, "|").concat(unitB.id);
|
|
9
9
|
}
|
|
10
10
|
var PairRestraints = /** @class */ (function () {
|
|
11
11
|
function PairRestraints(pairs) {
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"pair-restraints.js","sourceRoot":"","sources":["../../../src/mol-model-props/integrative/pair-restraints.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAIH,IAAM,UAAU,GAAa,EAAE,CAAC;AAShC,SAAS,UAAU,CAAC,MAAkC,EAAE,KAAW,EAAE,MAAkC,EAAE,KAAW;IAChH,
|
|
1
|
+
{"version":3,"file":"pair-restraints.js","sourceRoot":"","sources":["../../../src/mol-model-props/integrative/pair-restraints.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAIH,IAAM,UAAU,GAAa,EAAE,CAAC;AAShC,SAAS,UAAU,CAAC,MAAkC,EAAE,KAAW,EAAE,MAAkC,EAAE,KAAW;IAChH,OAAO,UAAG,MAAM,cAAI,KAAK,CAAC,EAAE,cAAI,MAAM,cAAI,KAAK,CAAC,EAAE,CAAE,CAAC;AACzD,CAAC;AAED;IAeI,wBAAmB,KAAuB;QAAvB,UAAK,GAAL,KAAK,CAAkB;QACtC,IAAM,cAAc,GAAG,IAAI,GAAG,EAAoB,CAAC;QACnD,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,UAAC,CAAC,EAAE,CAAC;YACpB,IAAM,GAAG,GAAG,UAAU,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC;YAC7D,IAAM,OAAO,GAAG,cAAc,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;YACxC,IAAI,OAAO;gBAAE,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;;gBACxB,cAAc,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;QACtC,CAAC,CAAC,CAAC;QAEH,IAAI,CAAC,KAAK,GAAG,KAAK,CAAC,MAAM,CAAC;QAC1B,IAAI,CAAC,cAAc,GAAG,cAAc,CAAC;IACzC,CAAC;IAtBD,8BAA8B;IAC9B,uCAAc,GAAd,UAAe,MAAkC,EAAE,KAAW,EAAE,MAAkC,EAAE,KAAW;QAC3G,IAAM,GAAG,GAAG,UAAU,CAAC,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;QACrD,OAAO,IAAI,CAAC,cAAc,CAAC,GAAG,CAAC,GAAG,CAAC,IAAI,UAAU,CAAC;IACtD,CAAC;IAED,iCAAQ,GAAR,UAAS,MAAkC,EAAE,KAAW,EAAE,MAAkC,EAAE,KAAW;QAAzG,iBAGC;QAFG,IAAM,OAAO,GAAG,IAAI,CAAC,cAAc,CAAC,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;QAClE,OAAO,OAAO,CAAC,GAAG,CAAC,UAAA,GAAG,IAAI,OAAA,KAAI,CAAC,KAAK,CAAC,GAAG,CAAC,EAAf,CAAe,CAAC,CAAC;IAC/C,CAAC;IAcL,qBAAC;AAAD,CAAC,AA3BD,IA2BC"}
|
|
@@ -46,7 +46,7 @@ var BestDatabaseSequenceMapping;
|
|
|
46
46
|
var dbName = data.dbName[rI];
|
|
47
47
|
if (!dbName)
|
|
48
48
|
return;
|
|
49
|
-
return dbName
|
|
49
|
+
return "".concat(dbName, " ").concat(data.accession[rI], " ").concat(data.num[rI], " ").concat(data.residue[rI]);
|
|
50
50
|
}
|
|
51
51
|
BestDatabaseSequenceMapping.getLabel = getLabel;
|
|
52
52
|
function fromCif(model) {
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"best-database-mapping.js","sourceRoot":"","sources":["../../../src/mol-model-props/sequence/best-database-mapping.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAGH,OAAO,EAAE,WAAW,EAAE,MAAM,yCAAyC,CAAC;AACtE,OAAO,EAAE,wBAAwB,EAAE,MAAM,iCAAiC,CAAC;AAG3E,OAAO,EAAE,mBAAmB,EAAE,MAAM,iCAAiC,CAAC;AAEtE,OAAO,EAAE,2BAA2B,EAAE,CAAC;AASvC,IAAU,2BAA2B,CAwEpC;AAxED,WAAU,2BAA2B;;IACpB,oCAAQ,GAAkE,mBAAmB,CAAC,cAAc,CAAC;QACtH,KAAK,EAAE,gCAAgC;QACvC,UAAU,EAAE,wBAAwB,CAAC;YACjC,IAAI,EAAE,wCAAwC;SACjD,CAAC;QACF,IAAI,EAAE,QAAQ;QACd,aAAa,EAAE,EAAE;QACjB,SAAS,EAAE,cAAM,OAAA,CAAC,EAAE,CAAC,EAAJ,CAAI;QACrB,YAAY,EAAE,UAAC,IAAW,gBAAK,OAAA,WAAW,CAAC,EAAE,CAAC,IAAI,CAAC,UAAU,CAAC,IAAI,CAAA,MAAA,MAAA,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC,KAAK,CAAC,UAAU,0CAAE,SAAS,0CAAE,UAAU,CAAC,OAAO,CAAC,SAAS,CAAC,KAAI,CAAC,CAAA,EAAA;QACtJ,MAAM,EAAE,UAAO,GAAG,EAAE,IAAI;;gBACpB,sBAAO,EAAE,KAAK,EAAE,OAAO,CAAC,IAAI,CAAC,EAAE,EAAC;;aACnC;KACJ,CAAC,CAAC;IAEH,SAAgB,MAAM,CAAC,GAA8B;QACjD,IAAM,KAAK,GAAG,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC;QAC7B,IAAM,IAAI,GAAG,4BAAA,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,KAAK,CAAC;QACvC,IAAI,CAAC,IAAI;YAAE,OAAO,EAAE,CAAC;QACrB,IAAM,EAAE,GAAG,GAAG,CAAC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;QAC1C,IAAM,EAAE,GAAG,KAAK,CAAC,eAAe,CAAC,mBAAmB,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;QACjE,OAAO,IAAI,CAAC,SAAS,CAAC,EAAE,CAAC,CAAC;IAC9B,CAAC;IAPe,kCAAM,SAOrB,CAAA;IAED,SAAgB,QAAQ,CAAC,GAA8B;QACnD,IAAM,KAAK,GAAG,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC;QAC7B,IAAM,IAAI,GAAG,4BAAA,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,KAAK,CAAC;QACvC,IAAI,CAAC,IAAI;YAAE,OAAO;QAClB,IAAM,EAAE,GAAG,GAAG,CAAC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;QAC1C,IAAM,EAAE,GAAG,KAAK,CAAC,eAAe,CAAC,mBAAmB,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;QACjE,IAAM,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;QAC/B,IAAI,CAAC,MAAM;YAAE,OAAO;QACpB,
|
|
1
|
+
{"version":3,"file":"best-database-mapping.js","sourceRoot":"","sources":["../../../src/mol-model-props/sequence/best-database-mapping.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAGH,OAAO,EAAE,WAAW,EAAE,MAAM,yCAAyC,CAAC;AACtE,OAAO,EAAE,wBAAwB,EAAE,MAAM,iCAAiC,CAAC;AAG3E,OAAO,EAAE,mBAAmB,EAAE,MAAM,iCAAiC,CAAC;AAEtE,OAAO,EAAE,2BAA2B,EAAE,CAAC;AASvC,IAAU,2BAA2B,CAwEpC;AAxED,WAAU,2BAA2B;;IACpB,oCAAQ,GAAkE,mBAAmB,CAAC,cAAc,CAAC;QACtH,KAAK,EAAE,gCAAgC;QACvC,UAAU,EAAE,wBAAwB,CAAC;YACjC,IAAI,EAAE,wCAAwC;SACjD,CAAC;QACF,IAAI,EAAE,QAAQ;QACd,aAAa,EAAE,EAAE;QACjB,SAAS,EAAE,cAAM,OAAA,CAAC,EAAE,CAAC,EAAJ,CAAI;QACrB,YAAY,EAAE,UAAC,IAAW,gBAAK,OAAA,WAAW,CAAC,EAAE,CAAC,IAAI,CAAC,UAAU,CAAC,IAAI,CAAA,MAAA,MAAA,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC,KAAK,CAAC,UAAU,0CAAE,SAAS,0CAAE,UAAU,CAAC,OAAO,CAAC,SAAS,CAAC,KAAI,CAAC,CAAA,EAAA;QACtJ,MAAM,EAAE,UAAO,GAAG,EAAE,IAAI;;gBACpB,sBAAO,EAAE,KAAK,EAAE,OAAO,CAAC,IAAI,CAAC,EAAE,EAAC;;aACnC;KACJ,CAAC,CAAC;IAEH,SAAgB,MAAM,CAAC,GAA8B;QACjD,IAAM,KAAK,GAAG,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC;QAC7B,IAAM,IAAI,GAAG,4BAAA,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,KAAK,CAAC;QACvC,IAAI,CAAC,IAAI;YAAE,OAAO,EAAE,CAAC;QACrB,IAAM,EAAE,GAAG,GAAG,CAAC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;QAC1C,IAAM,EAAE,GAAG,KAAK,CAAC,eAAe,CAAC,mBAAmB,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;QACjE,OAAO,IAAI,CAAC,SAAS,CAAC,EAAE,CAAC,CAAC;IAC9B,CAAC;IAPe,kCAAM,SAOrB,CAAA;IAED,SAAgB,QAAQ,CAAC,GAA8B;QACnD,IAAM,KAAK,GAAG,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC;QAC7B,IAAM,IAAI,GAAG,4BAAA,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,KAAK,CAAC;QACvC,IAAI,CAAC,IAAI;YAAE,OAAO;QAClB,IAAM,EAAE,GAAG,GAAG,CAAC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;QAC1C,IAAM,EAAE,GAAG,KAAK,CAAC,eAAe,CAAC,mBAAmB,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;QACjE,IAAM,MAAM,GAAG,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;QAC/B,IAAI,CAAC,MAAM;YAAE,OAAO;QACpB,OAAO,UAAG,MAAM,cAAI,IAAI,CAAC,SAAS,CAAC,EAAE,CAAC,cAAI,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,cAAI,IAAI,CAAC,OAAO,CAAC,EAAE,CAAC,CAAE,CAAC;IACjF,CAAC;IATe,oCAAQ,WASvB,CAAA;IAED,SAAS,OAAO,CAAC,KAAY;QACzB,IAAI,CAAC,WAAW,CAAC,EAAE,CAAC,KAAK,CAAC,UAAU,CAAC;YAAE,OAAO;QAEtC,IAAA,SAAS,GAAK,KAAK,CAAC,UAAU,CAAC,IAAI,CAAC,KAAK,CAAC,UAAU,UAA3C,CAA4C;QAC7D,IAAM,OAAO,GAAG,SAAS,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAC;QAC9C,IAAM,MAAM,GAAG,SAAS,CAAC,QAAQ,CAAC,QAAQ,CAAC,CAAC;QAC5C,IAAM,MAAM,GAAG,SAAS,CAAC,QAAQ,CAAC,QAAQ,CAAC,CAAC;QAC5C,IAAM,MAAM,GAAG,SAAS,CAAC,QAAQ,CAAC,QAAQ,CAAC,CAAC;QAE5C,IAAI,CAAC,OAAO,IAAI,CAAC,MAAM,IAAI,CAAC,MAAM,IAAI,CAAC,MAAM;YAAE,OAAO;QAE9C,IAAA,eAAe,GAAK,KAAK,CAAC,eAAe,gBAA1B,CAA2B;QAC5C,IAAA,KAAqC,KAAK,CAAC,eAAe,CAAC,mBAAmB,EAA5E,KAAK,WAAA,EAAW,cAAc,aAA8C,CAAC;QACrF,IAAM,MAAM,GAAG,IAAI,KAAK,CAAS,KAAK,CAAC,CAAC;QACxC,IAAM,SAAS,GAAG,IAAI,KAAK,CAAS,KAAK,CAAC,CAAC;QAC3C,IAAM,GAAG,GAAG,IAAI,KAAK,CAAS,KAAK,CAAC,CAAC;QACrC,IAAM,OAAO,GAAG,IAAI,KAAK,CAAS,KAAK,CAAC,CAAC;QAEzC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,KAAK,EAAE,CAAC,EAAE,EAAE;YAC5B,IAAM,GAAG,GAAG,eAAe,CAAC,KAAK,CAAC,cAAc,CAAC,CAAC,CAAC,CAAC,CAAC;YAErD,IAAI,OAAO,CAAC,SAAS,CAAC,GAAG,CAAC,oBAA6B,EAAE;gBACrD,MAAM,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC;gBACjB,SAAS,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC;gBACpB,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;gBACb,OAAO,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC;gBAClB,SAAS;aACZ;YAED,MAAM,CAAC,GAAG,CAAC,GAAG,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;YAC/B,SAAS,CAAC,GAAG,CAAC,GAAG,MAAM,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;YACjC,GAAG,CAAC,GAAG,CAAC,GAAG,MAAM,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;YAC3B,OAAO,CAAC,GAAG,CAAC,GAAG,MAAM,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;SAClC;QAED,OAAO,EAAE,MAAM,QAAA,EAAE,SAAS,WAAA,EAAE,GAAG,KAAA,EAAE,OAAO,SAAA,EAAE,CAAC;IAC/C,CAAC;AACL,CAAC,EAxES,2BAA2B,KAA3B,2BAA2B,QAwEpC"}
|
|
@@ -8,34 +8,34 @@ import { ThemeDataContext } from '../../../mol-theme/theme';
|
|
|
8
8
|
import { ParamDefinition as PD } from '../../../mol-util/param-definition';
|
|
9
9
|
export declare const BestDatabaseSequenceMappingColorThemeParams: {
|
|
10
10
|
palette: PD.Mapped<PD.NamedParams<PD.Normalize<{
|
|
11
|
-
list: {
|
|
12
|
-
kind: "interpolate" | "set";
|
|
13
|
-
colors: import("../../../mol-util/color/color").ColorListEntry[];
|
|
14
|
-
};
|
|
15
|
-
}>, "colors"> | PD.NamedParams<PD.Normalize<{
|
|
16
11
|
maxCount: number;
|
|
17
12
|
hue: [number, number];
|
|
18
13
|
chroma: [number, number];
|
|
19
14
|
luminance: [number, number];
|
|
20
15
|
clusteringStepCount: number;
|
|
21
16
|
minSampleCount: number;
|
|
22
|
-
}>, "generate"
|
|
17
|
+
}>, "generate"> | PD.NamedParams<PD.Normalize<{
|
|
18
|
+
list: {
|
|
19
|
+
kind: "set" | "interpolate";
|
|
20
|
+
colors: import("../../../mol-util/color/color").ColorListEntry[];
|
|
21
|
+
};
|
|
22
|
+
}>, "colors">>;
|
|
23
23
|
};
|
|
24
24
|
export declare type BestDatabaseSequenceMappingColorThemeParams = typeof BestDatabaseSequenceMappingColorThemeParams;
|
|
25
25
|
export declare function getBestDatabaseSequenceMappingColorThemeParams(ctx: ThemeDataContext): {
|
|
26
26
|
palette: PD.Mapped<PD.NamedParams<PD.Normalize<{
|
|
27
|
-
list: {
|
|
28
|
-
kind: "interpolate" | "set";
|
|
29
|
-
colors: import("../../../mol-util/color/color").ColorListEntry[];
|
|
30
|
-
};
|
|
31
|
-
}>, "colors"> | PD.NamedParams<PD.Normalize<{
|
|
32
27
|
maxCount: number;
|
|
33
28
|
hue: [number, number];
|
|
34
29
|
chroma: [number, number];
|
|
35
30
|
luminance: [number, number];
|
|
36
31
|
clusteringStepCount: number;
|
|
37
32
|
minSampleCount: number;
|
|
38
|
-
}>, "generate"
|
|
33
|
+
}>, "generate"> | PD.NamedParams<PD.Normalize<{
|
|
34
|
+
list: {
|
|
35
|
+
kind: "set" | "interpolate";
|
|
36
|
+
colors: import("../../../mol-util/color/color").ColorListEntry[];
|
|
37
|
+
};
|
|
38
|
+
}>, "colors">>;
|
|
39
39
|
};
|
|
40
40
|
export declare function BestDatabaseSequenceMappingColorTheme(ctx: ThemeDataContext, props: PD.Values<BestDatabaseSequenceMappingColorThemeParams>): ColorTheme<BestDatabaseSequenceMappingColorThemeParams>;
|
|
41
41
|
export declare const BestDatabaseSequenceMappingColorThemeProvider: ColorTheme.Provider<BestDatabaseSequenceMappingColorThemeParams, 'best-sequence-database-mapping'>;
|
|
@@ -33,7 +33,7 @@ export function BestDatabaseSequenceMappingColorTheme(ctx, props) {
|
|
|
33
33
|
}
|
|
34
34
|
}
|
|
35
35
|
var l_1 = StructureElement.Location.create(ctx.structure);
|
|
36
|
-
var palette_1 = getPalette(globalAccessionMap.size + 1, props, { valueLabel: function (i) { return ""
|
|
36
|
+
var palette_1 = getPalette(globalAccessionMap.size + 1, props, { valueLabel: function (i) { return "".concat(i); } });
|
|
37
37
|
var colorMap_1 = new Map();
|
|
38
38
|
var getColor_1 = function (location) {
|
|
39
39
|
var key = BestDatabaseSequenceMapping.getKey(location);
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"best-database-mapping.js","sourceRoot":"","sources":["../../../../src/mol-model-props/sequence/themes/best-database-mapping.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAGH,OAAO,EAAE,IAAI,EAAE,gBAAgB,EAAE,IAAI,EAAE,MAAM,8BAA8B,CAAC;AAG5E,OAAO,EAAE,KAAK,EAAE,MAAM,yBAAyB,CAAC;AAChD,OAAO,EAAE,UAAU,EAAE,gBAAgB,EAAE,MAAM,iCAAiC,CAAC;AAC/E,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,oCAAoC,CAAC;AAE3E,OAAO,EAAE,2BAA2B,EAAE,MAAM,0BAA0B,CAAC;AAEvE,IAAM,YAAY,GAAG,KAAK,CAAC,QAAQ,CAAC,CAAC;AACrC,IAAM,WAAW,GAAG,0DAA0D,CAAC;AAE/E,kCAAkC;AAClC,IAAM,kBAAkB,GAAG,IAAI,GAAG,EAAkB,CAAC;AAErD,MAAM,CAAC,IAAM,2CAA2C,gBACjD,gBAAgB,CAAC,EAAE,IAAI,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,CAAC,CAC9D,CAAC;AAEF,MAAM,UAAU,8CAA8C,CAAC,GAAqB;IAChF,OAAO,2CAA2C,CAAC,CAAC,mBAAmB;AAC3E,CAAC;AACD,MAAM,UAAU,qCAAqC,CAAC,GAAqB,EAAE,KAA6D;IACtI,IAAI,KAAoB,CAAC;IAEzB,IAAI,GAAG,CAAC,SAAS,EAAE;QACf,KAAgB,UAAoB,EAApB,KAAA,GAAG,CAAC,SAAS,CAAC,MAAM,EAApB,cAAoB,EAApB,IAAoB,EAAE;YAAjC,IAAM,CAAC,SAAA;YACR,IAAM,OAAO,GAAG,2BAA2B,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;YAClE,IAAI,CAAC,OAAO;gBAAE,SAAS;YACvB,KAAkB,UAAiB,EAAjB,KAAA,OAAO,CAAC,SAAS,EAAjB,cAAiB,EAAjB,IAAiB,EAAE;gBAAhC,IAAM,GAAG,SAAA;gBACV,IAAI,CAAC,GAAG,IAAI,kBAAkB,CAAC,GAAG,CAAC,GAAG,CAAC;oBAAE,SAAS;gBAClD,kBAAkB,CAAC,GAAG,CAAC,GAAG,EAAE,kBAAkB,CAAC,IAAI,CAAC,CAAC;aACxD;SACJ;QAED,IAAM,GAAC,GAAG,gBAAgB,CAAC,QAAQ,CAAC,MAAM,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC;QAC1D,IAAM,SAAO,GAAG,UAAU,CAAC,kBAAkB,CAAC,IAAI,GAAG,CAAC,EAAE,KAAK,EAAE,EAAE,UAAU,EAAE,UAAA,CAAC,IAAI,OAAA,
|
|
1
|
+
{"version":3,"file":"best-database-mapping.js","sourceRoot":"","sources":["../../../../src/mol-model-props/sequence/themes/best-database-mapping.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAGH,OAAO,EAAE,IAAI,EAAE,gBAAgB,EAAE,IAAI,EAAE,MAAM,8BAA8B,CAAC;AAG5E,OAAO,EAAE,KAAK,EAAE,MAAM,yBAAyB,CAAC;AAChD,OAAO,EAAE,UAAU,EAAE,gBAAgB,EAAE,MAAM,iCAAiC,CAAC;AAC/E,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,oCAAoC,CAAC;AAE3E,OAAO,EAAE,2BAA2B,EAAE,MAAM,0BAA0B,CAAC;AAEvE,IAAM,YAAY,GAAG,KAAK,CAAC,QAAQ,CAAC,CAAC;AACrC,IAAM,WAAW,GAAG,0DAA0D,CAAC;AAE/E,kCAAkC;AAClC,IAAM,kBAAkB,GAAG,IAAI,GAAG,EAAkB,CAAC;AAErD,MAAM,CAAC,IAAM,2CAA2C,gBACjD,gBAAgB,CAAC,EAAE,IAAI,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,CAAC,CAC9D,CAAC;AAEF,MAAM,UAAU,8CAA8C,CAAC,GAAqB;IAChF,OAAO,2CAA2C,CAAC,CAAC,mBAAmB;AAC3E,CAAC;AACD,MAAM,UAAU,qCAAqC,CAAC,GAAqB,EAAE,KAA6D;IACtI,IAAI,KAAoB,CAAC;IAEzB,IAAI,GAAG,CAAC,SAAS,EAAE;QACf,KAAgB,UAAoB,EAApB,KAAA,GAAG,CAAC,SAAS,CAAC,MAAM,EAApB,cAAoB,EAApB,IAAoB,EAAE;YAAjC,IAAM,CAAC,SAAA;YACR,IAAM,OAAO,GAAG,2BAA2B,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;YAClE,IAAI,CAAC,OAAO;gBAAE,SAAS;YACvB,KAAkB,UAAiB,EAAjB,KAAA,OAAO,CAAC,SAAS,EAAjB,cAAiB,EAAjB,IAAiB,EAAE;gBAAhC,IAAM,GAAG,SAAA;gBACV,IAAI,CAAC,GAAG,IAAI,kBAAkB,CAAC,GAAG,CAAC,GAAG,CAAC;oBAAE,SAAS;gBAClD,kBAAkB,CAAC,GAAG,CAAC,GAAG,EAAE,kBAAkB,CAAC,IAAI,CAAC,CAAC;aACxD;SACJ;QAED,IAAM,GAAC,GAAG,gBAAgB,CAAC,QAAQ,CAAC,MAAM,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC;QAC1D,IAAM,SAAO,GAAG,UAAU,CAAC,kBAAkB,CAAC,IAAI,GAAG,CAAC,EAAE,KAAK,EAAE,EAAE,UAAU,EAAE,UAAA,CAAC,IAAI,OAAA,UAAG,CAAC,CAAE,EAAN,CAAM,EAAE,CAAC,CAAC;QAC5F,IAAM,UAAQ,GAAG,IAAI,GAAG,EAAiB,CAAC;QAE1C,IAAM,UAAQ,GAAG,UAAC,QAAmC;YACjD,IAAM,GAAG,GAAG,2BAA2B,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC;YACzD,IAAI,CAAC,GAAG;gBAAE,OAAO,YAAY,CAAC;YAE9B,IAAI,UAAQ,CAAC,GAAG,CAAC,GAAG,CAAC;gBAAE,OAAO,UAAQ,CAAC,GAAG,CAAC,GAAG,CAAE,CAAC;YAEjD,IAAM,KAAK,GAAG,SAAO,CAAC,KAAK,CAAC,kBAAkB,CAAC,GAAG,CAAC,GAAG,CAAE,CAAC,CAAC;YAC1D,UAAQ,CAAC,GAAG,CAAC,GAAG,EAAE,KAAK,CAAC,CAAC;YACzB,OAAO,KAAK,CAAC;QACjB,CAAC,CAAC;QAEF,KAAK,GAAG,UAAC,QAAkB;YACvB,IAAI,gBAAgB,CAAC,QAAQ,CAAC,EAAE,CAAC,QAAQ,CAAC,IAAI,IAAI,CAAC,QAAQ,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE;gBACxE,OAAO,UAAQ,CAAC,QAAQ,CAAC,CAAC;aAC7B;iBAAM,IAAI,IAAI,CAAC,UAAU,CAAC,QAAQ,CAAC,EAAE;gBAClC,GAAC,CAAC,IAAI,GAAG,QAAQ,CAAC,KAAK,CAAC;gBACxB,GAAC,CAAC,OAAO,GAAG,QAAQ,CAAC,KAAK,CAAC,QAAQ,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC;gBACrD,OAAO,UAAQ,CAAC,GAAC,CAAC,CAAC;aACtB;YACD,OAAO,YAAY,CAAC;QACxB,CAAC,CAAC;KACL;SAAM;QACH,KAAK,GAAG,cAAM,OAAA,YAAY,EAAZ,CAAY,CAAC;KAC9B;IAED,OAAO;QACH,OAAO,EAAE,qCAAqC;QAC9C,WAAW,EAAE,OAAO;QACpB,eAAe,EAAE,IAAI;QACrB,KAAK,OAAA;QACL,KAAK,OAAA;QACL,WAAW,EAAE,WAAW;KAC3B,CAAC;AACN,CAAC;AAED,MAAM,CAAC,IAAM,6CAA6C,GAAuG;IAC7J,IAAI,EAAE,gCAAgC;IACtC,KAAK,EAAE,gCAAgC;IACvC,QAAQ,kCAA6B;IACrC,OAAO,EAAE,qCAAqC;IAC9C,SAAS,EAAE,8CAA8C;IACzD,aAAa,EAAE,EAAE,CAAC,gBAAgB,CAAC,2CAA2C,CAAC;IAC/E,YAAY,EAAE,UAAC,GAAqB,YAAK,OAAA,CAAC,CAAC,CAAA,MAAA,GAAG,CAAC,SAAS,0CAAE,MAAM,CAAC,IAAI,CAAC,UAAA,CAAC,IAAI,OAAA,2BAA2B,CAAC,QAAQ,CAAC,YAAY,CAAC,CAAC,CAAC,EAApD,CAAoD,CAAC,CAAA,CAAA,EAAA;IAChI,sBAAsB,EAAE;QACpB,MAAM,EAAE,UAAO,GAA2B,EAAE,IAAsB;;;;;wBAC9D,IAAI,CAAC,IAAI,CAAC,SAAS;4BAAE,sBAAO;8BAES,EAArB,KAAA,IAAI,CAAC,SAAS,CAAC,MAAM;;;6BAArB,CAAA,cAAqB,CAAA;wBAA1B,CAAC;wBACR,qBAAM,2BAA2B,CAAC,QAAQ,CAAC,MAAM,CAAC,GAAG,EAAE,CAAC,EAAE,KAAK,CAAC,EAAE,IAAI,CAAC,EAAA;;wBAAvE,SAAuE,CAAC;;;wBAD5D,IAAqB,CAAA;;;;;aAGxC;QACD,MAAM,EAAE,UAAC,IAAI;YACT,IAAI,CAAC,IAAI,CAAC,SAAS;gBAAE,OAAO;YAC5B,KAAgB,UAAqB,EAArB,KAAA,IAAI,CAAC,SAAS,CAAC,MAAM,EAArB,cAAqB,EAArB,IAAqB,EAAE;gBAAlC,IAAM,CAAC,SAAA;gBACR,2BAA2B,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,EAAE,KAAK,CAAC,CAAC;aACtD;QACL,CAAC;KACJ;CACJ,CAAC"}
|
|
@@ -114,7 +114,7 @@ declare namespace PluginBehavior {
|
|
|
114
114
|
export const CreateCategory: StateTransformer<Root, Category, ParamDefinition.Normalize<{
|
|
115
115
|
label: string;
|
|
116
116
|
}>>;
|
|
117
|
-
export function getCategoryId(t: StateTransformer): "
|
|
117
|
+
export function getCategoryId(t: StateTransformer): "representation" | "interaction" | "common" | "custom-props" | "misc";
|
|
118
118
|
export function create<P>(params: CreateParams<P>): StateTransformer<Category, Behavior, P>;
|
|
119
119
|
export function simpleCommandHandler<T>(cmd: PluginCommand<T>, action: (data: T, ctx: PluginContext) => void | Promise<void>): {
|
|
120
120
|
new (ctx: PluginContext): {
|
|
@@ -90,14 +90,14 @@ function accessibleSurfaceAreaLabel(loci) {
|
|
|
90
90
|
}
|
|
91
91
|
if (seen_1.size === 0)
|
|
92
92
|
return;
|
|
93
|
-
var residueCount = "<small>("
|
|
94
|
-
return "Accessible Surface Area "
|
|
93
|
+
var residueCount = "<small>(".concat(seen_1.size, " ").concat(seen_1.size > 1 ? 'Residues sum' : 'Residue', ")</small>");
|
|
94
|
+
return "Accessible Surface Area ".concat(residueCount, ": ").concat(cummulativeArea_1.toFixed(2), " \u212B<sup>2</sup>");
|
|
95
95
|
}
|
|
96
96
|
else if (loci.kind === 'structure-loci') {
|
|
97
97
|
var accessibleSurfaceArea = AccessibleSurfaceAreaProvider.get(loci.structure).value;
|
|
98
98
|
if (!accessibleSurfaceArea || loci.structure.customPropertyDescriptors.hasReference(AccessibleSurfaceAreaProvider.descriptor))
|
|
99
99
|
return;
|
|
100
|
-
return "Accessible Surface Area <small>(Whole Structure)</small>: "
|
|
100
|
+
return "Accessible Surface Area <small>(Whole Structure)</small>: ".concat(arraySum(accessibleSurfaceArea.area).toFixed(2), " \u212B<sup>2</sup>");
|
|
101
101
|
}
|
|
102
102
|
}
|
|
103
103
|
//
|
package/lib/mol-plugin/behavior/dynamic/custom-props/computed/accessible-surface-area.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
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|
|
1
|
+
{"version":3,"file":"accessible-surface-area.js","sourceRoot":"","sources":["../../../../../../src/mol-plugin/behavior/dynamic/custom-props/computed/accessible-surface-area.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,0CAA0C,CAAC;AACjF,OAAO,EAAE,6BAA6B,EAAE,4BAA4B,EAAE,MAAM,iEAAiE,CAAC;AAE9I,OAAO,EAAE,uCAAuC,EAAE,MAAM,wEAAwE,CAAC;AACjI,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,QAAQ,EAAE,MAAM,+BAA+B,CAAC;AACzD,OAAO,EAAE,wBAAwB,EAAE,MAAM,kDAAkD,CAAC;AAC5F,OAAO,EAAE,uBAAuB,EAAE,0BAA0B,EAAE,MAAM,mEAAmE,CAAC;AACxI,OAAO,EAAE,gBAAgB,IAAI,EAAE,EAAE,MAAM,4CAA4C,CAAC;AAEpF,MAAM,CAAC,IAAM,qBAAqB,GAAG,cAAc,CAAC,MAAM,CAAgD;IACtG,IAAI,EAAE,uCAAuC;IAC7C,QAAQ,EAAE,cAAc;IACxB,OAAO,EAAE,EAAE,IAAI,EAAE,yBAAyB,EAAE;IAC5C,IAAI;QAAgB,2BAAqE;QAAnF;YAAA,qEAwCL;YAvCW,cAAQ,GAAG,6BAA6B,CAAA;YAExC,mBAAa,GAAG;gBACpB,KAAK,EAAE,UAAC,IAAU;oBACd,IAAI,CAAC,KAAI,CAAC,MAAM,CAAC,WAAW;wBAAE,OAAO;oBACrC,OAAO,0BAA0B,CAAC,IAAI,CAAC,CAAC;gBAC5C,CAAC;aACJ,CAAA;;QAgCL,CAAC;QA9BG,wBAAM,GAAN,UAAO,CAAgD;YACnD,IAAM,OAAO,GAAG,CACZ,IAAI,CAAC,MAAM,CAAC,UAAU,KAAK,CAAC,CAAC,UAAU;gBACvC,IAAI,CAAC,MAAM,CAAC,WAAW,KAAK,CAAC,CAAC,WAAW,CAC5C,CAAC;YACF,IAAI,CAAC,MAAM,CAAC,UAAU,GAAG,CAAC,CAAC,UAAU,CAAC;YACtC,IAAI,CAAC,MAAM,CAAC,WAAW,GAAG,CAAC,CAAC,WAAW,CAAC;YACxC,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,oBAAoB,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YAC/G,OAAO,OAAO,CAAC;QACnB,CAAC;QAED,0BAAQ,GAAR;YACI,wBAAwB,CAAC,aAAa,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC;YAEjE,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,QAAQ,CAAC,IAAI,CAAC,QAAQ,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YACnF,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,MAAM,CAAC,kBAAkB,CAAC,GAAG,CAAC,uCAAuC,CAAC,CAAC;YACzG,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,WAAW,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;YAC7D,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC;YAChD,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC;QACxD,CAAC;QAED,4BAAU,GAAV;YACI,wBAAwB,CAAC,gBAAgB,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC;YAEpE,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC;YAC7E,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,MAAM,CAAC,kBAAkB,CAAC,MAAM,CAAC,uCAAuC,CAAC,CAAC;YAC5G,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,cAAc,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;YAChE,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC;YACnD,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC;QAC3D,CAAC;QACL,cAAC;IAAD,CAAC,AAxCK,CAAc,cAAc,CAAC,OAAO,EAwCzC;IACD,MAAM,EAAE,cAAM,OAAA,CAAC;QACX,UAAU,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;QAC7B,WAAW,EAAE,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;KAChC,CAAC,EAHY,CAGZ;CACL,CAAC,CAAC;AAEH,EAAE;AAEF,SAAS,0BAA0B,CAAC,IAAU;IAC1C,IAAI,IAAI,CAAC,IAAI,KAAK,cAAc,EAAE;QAC9B,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;YAAE,OAAO;QAEvC,IAAM,qBAAqB,GAAG,6BAA6B,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,KAAK,CAAC;QACtF,IAAI,CAAC,qBAAqB,IAAI,IAAI,CAAC,SAAS,CAAC,yBAAyB,CAAC,YAAY,CAAC,6BAA6B,CAAC,UAAU,CAAC;YAAE,OAAO;QAE9H,IAAA,gBAAc,GAAK,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,aAAa,eAAtC,CAAuC;QACrD,IAAA,MAAI,GAAyB,qBAAqB,KAA9C,EAAE,oBAAkB,GAAK,qBAAqB,mBAA1B,CAA2B;QAC3D,IAAM,MAAI,GAAG,IAAI,GAAG,EAAU,CAAC;QAC/B,IAAI,iBAAe,GAAG,CAAC,CAAC;gCAEX,OAAO,EAAE,IAAI;YACd,IAAA,QAAQ,GAAK,IAAI,SAAT,CAAU;YAE1B,UAAU,CAAC,OAAO,CAAC,OAAO,EAAE,UAAA,GAAG;gBAC3B,IAAM,GAAG,GAAG,oBAAkB,CAAC,gBAAc,CAAC,IAAI,EAAE,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;gBACpE,IAAI,GAAG,KAAK,CAAC,CAAC,IAAI,CAAC,MAAI,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE;oBAC9B,iBAAe,IAAI,MAAI,CAAC,GAAG,CAAC,CAAC;oBAC7B,MAAI,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;iBACjB;YACL,CAAC,CAAC,CAAC;;QATP,KAAgC,UAAa,EAAb,KAAA,IAAI,CAAC,QAAQ,EAAb,cAAa,EAAb,IAAa;YAAlC,IAAA,WAAiB,EAAf,OAAO,aAAA,EAAE,IAAI,UAAA;oBAAb,OAAO,EAAE,IAAI;SAUzB;QACD,IAAI,MAAI,CAAC,IAAI,KAAK,CAAC;YAAE,OAAO;QAC5B,IAAM,YAAY,GAAG,kBAAW,MAAI,CAAC,IAAI,cAAI,MAAI,CAAC,IAAI,GAAG,CAAC,CAAC,CAAC,CAAC,cAAc,CAAC,CAAC,CAAC,SAAS,cAAW,CAAC;QAEnG,OAAO,kCAA2B,YAAY,eAAK,iBAAe,CAAC,OAAO,CAAC,CAAC,CAAC,wBAAqB,CAAC;KAEtG;SAAM,IAAI,IAAI,CAAC,IAAI,KAAK,gBAAgB,EAAE;QACvC,IAAM,qBAAqB,GAAG,6BAA6B,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,KAAK,CAAC;QACtF,IAAI,CAAC,qBAAqB,IAAI,IAAI,CAAC,SAAS,CAAC,yBAAyB,CAAC,YAAY,CAAC,6BAA6B,CAAC,UAAU,CAAC;YAAE,OAAO;QAEtI,OAAO,oEAA6D,QAAQ,CAAC,qBAAqB,CAAC,IAAI,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,wBAAqB,CAAC;KAC5I;AACL,CAAC;AAED,EAAE;AAEF,IAAM,QAAQ,GAAG,uBAAuB,CAAC,yBAAyB,EAAE,EAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,KAAK,CAAC;IACzF,EAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,aAAa,CAAC;QAC7B,EAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,KAAK,CAAC;YACrB,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC;gBAC3B,YAAY,EAAE,EAAE,CAAC,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC,EAAE,CAAC,IAAI,CAAC,iBAAiB,CAAC,EAAE,WAAW,CAAC,CAAC;gBACvE,cAAc,EAAE,4BAA4B,CAAC,QAAQ,CAAC,MAAM,EAAE;aACjE,CAAC;SACL,CAAC;KACL,CAAC;CACL,CAAC,EAAE;IACA,WAAW,EAAE,iCAAiC;IAC9C,QAAQ,EAAE,0BAA0B,CAAC,OAAO;IAC5C,sBAAsB,EAAE,UAAC,GAAG,EAAE,SAAS;QACnC,OAAO,6BAA6B,CAAC,MAAM,CAAC,GAAG,EAAE,SAAS,CAAC,CAAC;IAChE,CAAC;CACJ,CAAC,CAAC;AAEH,IAAM,YAAY,GAAG,uBAAuB,CAAC,6BAA6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@@ -63,11 +63,11 @@ export var Interactions = PluginBehavior.create({
|
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|
63
63
|
groupLabels.push(featureGroupLabel(group));
|
|
64
64
|
}
|
|
65
65
|
if (typeLabels.length)
|
|
66
|
-
label.push("<small>Types</small> "
|
|
66
|
+
label.push("<small>Types</small> ".concat(typeLabels.join(', ')));
|
|
67
67
|
if (groupLabels.length)
|
|
68
|
-
label.push("<small>Groups</small> "
|
|
68
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+
label.push("<small>Groups</small> ".concat(groupLabels.join(', ')));
|
|
69
69
|
if (label.length)
|
|
70
|
-
labels.push("Interaction Feature: "
|
|
70
|
+
labels.push("Interaction Feature: ".concat(label.join(' | ')));
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|
71
71
|
}
|
|
72
72
|
return labels.length ? labels.join('<br/>') : undefined;
|
|
73
73
|
default: return void 0;
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|
@@ -1 +1 @@
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|
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1
|
-
{"version":3,"file":"interactions.js","sourceRoot":"","sources":["../../../../../../src/mol-plugin/behavior/dynamic/custom-props/computed/interactions.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,0CAA0C,CAAC;AACjF,OAAO,EAAE,oBAAoB,EAAE,MAAM,sDAAsD,CAAC;AAE5F,OAAO,EAAE,cAAc,EAAE,MAAM,0BAA0B,CAAC;AAC1D,OAAO,EAAE,iBAAiB,EAAE,MAAM,yCAAyC,CAAC;AAC5E,OAAO,EAAE,gBAAgB,EAAE,MAAM,sDAAsD,CAAC;AACxF,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,iBAAiB,EAAE,gBAAgB,EAAE,MAAM,6DAA6D,CAAC;AAElH,OAAO,EAAE,WAAW,EAAE,MAAM,+BAA+B,CAAC;AAC5D,OAAO,EAAE,iCAAiC,EAAE,MAAM,iEAAiE,CAAC;AACpH,OAAO,EAAE,kCAAkC,EAAE,MAAM,sEAAsE,CAAC;AAE1H,MAAM,CAAC,IAAM,YAAY,GAAG,cAAc,CAAC,MAAM,CAAgD;IAC7F,IAAI,EAAE,4BAA4B;IAClC,QAAQ,EAAE,cAAc;IACxB,OAAO,EAAE,EAAE,IAAI,EAAE,cAAc,EAAE;IACjC,IAAI;QAAgB,2BAAqE;QAAnF;YAAA,qEA0FL;YAzFW,cAAQ,GAAG,oBAAoB,CAAA;YAe/B,mBAAa,GAAG;gBACpB,KAAK,EAAE,UAAC,IAAU;oBACd,IAAI,CAAC,KAAI,CAAC,MAAM,CAAC,WAAW;wBAAE,OAAO,KAAK,CAAC,CAAC;oBAE5C,QAAQ,IAAI,CAAC,IAAI,EAAE;wBACf,KAAK,cAAc;4BACf,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;gCAAE,OAAO,KAAK,CAAC,CAAC;4BAE9C,IAAM,MAAM,GAAa,EAAE,CAAC;4BAC5B,IAAM,UAAU,GAAG,KAAI,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;4BAEtD,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;gCAAvB,IAAM,CAAC,mBAAA;gCACR,IAAM,YAAY,GAAG,KAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;gCAChD,IAAI,CAAC,YAAY;oCAAE,SAAS;gCAE5B,IAAM,CAAC,GAAG,gBAAgB,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC;gCAC/C,IAAI,CAAC,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;oCAAE,SAAS;gCAEtC,IAAM,CAAC,GAAG,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;gCACxB,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC;oCAAE,SAAS;gCAE/C,IAAM,QAAQ,GAAG,YAAY,CAAC,aAAa,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;gCAC3D,IAAI,CAAC,QAAQ;oCAAE,SAAS;gCAExB,IAAM,UAAU,GAAa,EAAE,CAAC;gCAChC,IAAM,WAAW,GAAa,EAAE,CAAC;gCACjC,IAAM,KAAK,GAAa,EAAE,CAAC;gCAE3B,IAAM,GAAG,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;gCAChC,IAAA,KAAK,GAAkD,QAAQ,MAA1D,EAAE,MAAM,GAA0C,QAAQ,OAAlD,EAAE,KAAwC,QAAQ,cAAb,EAAlB,OAAO,aAAA,EAAE,OAAO,aAAE,CAAc;gCACxE,KAAK,IAAI,CAAC,GAAG,OAAO,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,OAAO,CAAC,GAAG,GAAG,CAAC,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;oCAC3D,IAAM,CAAC,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;oCACrB,IAAM,IAAI,GAAG,KAAK,CAAC,CAAC,CAAC,CAAC;oCACtB,IAAM,KAAK,GAAG,MAAM,CAAC,CAAC,CAAC,CAAC;oCACxB,IAAI,IAAI;wCAAE,UAAU,CAAC,IAAI,CAAC,gBAAgB,CAAC,IAAI,CAAC,CAAC,CAAC;oCAClD,IAAI,KAAK;wCAAE,WAAW,CAAC,IAAI,CAAC,iBAAiB,CAAC,KAAK,CAAC,CAAC,CAAC;iCACzD;gCAED,IAAI,UAAU,CAAC,MAAM;oCAAE,KAAK,CAAC,IAAI,CAAC,
|
|
1
|
+
{"version":3,"file":"interactions.js","sourceRoot":"","sources":["../../../../../../src/mol-plugin/behavior/dynamic/custom-props/computed/interactions.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,0CAA0C,CAAC;AACjF,OAAO,EAAE,oBAAoB,EAAE,MAAM,sDAAsD,CAAC;AAE5F,OAAO,EAAE,cAAc,EAAE,MAAM,0BAA0B,CAAC;AAC1D,OAAO,EAAE,iBAAiB,EAAE,MAAM,yCAAyC,CAAC;AAC5E,OAAO,EAAE,gBAAgB,EAAE,MAAM,sDAAsD,CAAC;AACxF,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,iBAAiB,EAAE,gBAAgB,EAAE,MAAM,6DAA6D,CAAC;AAElH,OAAO,EAAE,WAAW,EAAE,MAAM,+BAA+B,CAAC;AAC5D,OAAO,EAAE,iCAAiC,EAAE,MAAM,iEAAiE,CAAC;AACpH,OAAO,EAAE,kCAAkC,EAAE,MAAM,sEAAsE,CAAC;AAE1H,MAAM,CAAC,IAAM,YAAY,GAAG,cAAc,CAAC,MAAM,CAAgD;IAC7F,IAAI,EAAE,4BAA4B;IAClC,QAAQ,EAAE,cAAc;IACxB,OAAO,EAAE,EAAE,IAAI,EAAE,cAAc,EAAE;IACjC,IAAI;QAAgB,2BAAqE;QAAnF;YAAA,qEA0FL;YAzFW,cAAQ,GAAG,oBAAoB,CAAA;YAe/B,mBAAa,GAAG;gBACpB,KAAK,EAAE,UAAC,IAAU;oBACd,IAAI,CAAC,KAAI,CAAC,MAAM,CAAC,WAAW;wBAAE,OAAO,KAAK,CAAC,CAAC;oBAE5C,QAAQ,IAAI,CAAC,IAAI,EAAE;wBACf,KAAK,cAAc;4BACf,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;gCAAE,OAAO,KAAK,CAAC,CAAC;4BAE9C,IAAM,MAAM,GAAa,EAAE,CAAC;4BAC5B,IAAM,UAAU,GAAG,KAAI,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;4BAEtD,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;gCAAvB,IAAM,CAAC,mBAAA;gCACR,IAAM,YAAY,GAAG,KAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;gCAChD,IAAI,CAAC,YAAY;oCAAE,SAAS;gCAE5B,IAAM,CAAC,GAAG,gBAAgB,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC;gCAC/C,IAAI,CAAC,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;oCAAE,SAAS;gCAEtC,IAAM,CAAC,GAAG,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;gCACxB,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC;oCAAE,SAAS;gCAE/C,IAAM,QAAQ,GAAG,YAAY,CAAC,aAAa,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;gCAC3D,IAAI,CAAC,QAAQ;oCAAE,SAAS;gCAExB,IAAM,UAAU,GAAa,EAAE,CAAC;gCAChC,IAAM,WAAW,GAAa,EAAE,CAAC;gCACjC,IAAM,KAAK,GAAa,EAAE,CAAC;gCAE3B,IAAM,GAAG,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;gCAChC,IAAA,KAAK,GAAkD,QAAQ,MAA1D,EAAE,MAAM,GAA0C,QAAQ,OAAlD,EAAE,KAAwC,QAAQ,cAAb,EAAlB,OAAO,aAAA,EAAE,OAAO,aAAE,CAAc;gCACxE,KAAK,IAAI,CAAC,GAAG,OAAO,CAAC,GAAG,CAAC,EAAE,EAAE,GAAG,OAAO,CAAC,GAAG,GAAG,CAAC,CAAC,EAAE,CAAC,GAAG,EAAE,EAAE,EAAE,CAAC,EAAE;oCAC3D,IAAM,CAAC,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;oCACrB,IAAM,IAAI,GAAG,KAAK,CAAC,CAAC,CAAC,CAAC;oCACtB,IAAM,KAAK,GAAG,MAAM,CAAC,CAAC,CAAC,CAAC;oCACxB,IAAI,IAAI;wCAAE,UAAU,CAAC,IAAI,CAAC,gBAAgB,CAAC,IAAI,CAAC,CAAC,CAAC;oCAClD,IAAI,KAAK;wCAAE,WAAW,CAAC,IAAI,CAAC,iBAAiB,CAAC,KAAK,CAAC,CAAC,CAAC;iCACzD;gCAED,IAAI,UAAU,CAAC,MAAM;oCAAE,KAAK,CAAC,IAAI,CAAC,+BAAwB,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,CAAE,CAAC,CAAC;gCACnF,IAAI,WAAW,CAAC,MAAM;oCAAE,KAAK,CAAC,IAAI,CAAC,gCAAyB,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,CAAE,CAAC,CAAC;gCACtF,IAAI,KAAK,CAAC,MAAM;oCAAE,MAAM,CAAC,IAAI,CAAC,+BAAwB,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,CAAE,CAAC,CAAC;6BAC9E;4BAED,OAAO,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC;wBAE5D,OAAO,CAAC,CAAC,OAAO,KAAK,CAAC,CAAC;qBAC1B;gBACL,CAAC;aACJ,CAAA;;QA0BL,CAAC;QAvFW,+BAAa,GAArB,UAAsB,SAAoB;YACtC,IAAM,UAAU,GAAgB,EAAE,CAAC;YACnC,IAAM,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,OAAO,CAAC,kBAAkB,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC;YAChE,IAAI,IAAI,EAAE;gBACN,IAAM,KAAK,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,IAAI,CAAC;gBAClC,IAAM,UAAU,GAAG,KAAK,CAAC,MAAM,CAAC,cAAc,CAAC,UAAU,CAAC,MAAM,CAAC,iBAAiB,CAAC,QAAQ,CAAC,SAAS,EAAE,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC,CAAC;gBAC5H,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;oBAAvB,IAAM,CAAC,mBAAA;oBACR,IAAI,CAAC,CAAC,GAAG;wBAAE,WAAW,CAAC,UAAU,EAAE,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;iBAClD;aACJ;YACD,OAAO,UAAU,CAAC;QACtB,CAAC;QAoDD,wBAAM,GAAN,UAAO,CAAgD;YACnD,IAAM,OAAO,GAAG,CACZ,IAAI,CAAC,MAAM,CAAC,UAAU,KAAK,CAAC,CAAC,UAAU;gBACvC,IAAI,CAAC,MAAM,CAAC,WAAW,KAAK,CAAC,CAAC,WAAW,CAC5C,CAAC;YACF,IAAI,CAAC,MAAM,CAAC,UAAU,GAAG,CAAC,CAAC,UAAU,CAAC;YACtC,IAAI,CAAC,MAAM,CAAC,WAAW,GAAG,CAAC,CAAC,WAAW,CAAC;YACxC,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,oBAAoB,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YAC/G,OAAO,OAAO,CAAC;QACnB,CAAC;QAED,0BAAQ,GAAR;YACI,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,QAAQ,CAAC,IAAI,CAAC,QAAQ,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YACnF,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,MAAM,CAAC,kBAAkB,CAAC,GAAG,CAAC,iCAAiC,CAAC,CAAC;YACnG,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,WAAW,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;YAC7D,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,QAAQ,CAAC,GAAG,CAAC,kCAAkC,CAAC,CAAC;QACvF,CAAC;QAED,4BAAU,GAAV;YACI,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC;YAC7E,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,MAAM,CAAC,kBAAkB,CAAC,MAAM,CAAC,iCAAiC,CAAC,CAAC;YACtG,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,cAAc,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;YAChE,IAAI,CAAC,GAAG,CAAC,cAAc,CAAC,SAAS,CAAC,QAAQ,CAAC,MAAM,CAAC,kCAAkC,CAAC,CAAC;QAC1F,CAAC;QACL,cAAC;IAAD,CAAC,AA1FK,CAAc,cAAc,CAAC,OAAO,EA0FzC;IACD,MAAM,EAAE,cAAM,OAAA,CAAC;QACX,UAAU,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;QAC7B,WAAW,EAAE,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;KAChC,CAAC,EAHY,CAGZ;CACL,CAAC,CAAC"}
|
|
@@ -51,7 +51,7 @@ export var ValenceModel = PluginBehavior.create({
|
|
|
51
51
|
var idealGeometry = vm.idealGeometry[idx];
|
|
52
52
|
var implicitH = vm.implicitH[idx];
|
|
53
53
|
var totalH = vm.totalH[idx];
|
|
54
|
-
labels.push("Valence Model: <small>Charge</small> "
|
|
54
|
+
labels.push("Valence Model: <small>Charge</small> ".concat(charge, " | <small>Ideal Geometry</small> ").concat(geometryLabel(idealGeometry), " | <small>Implicit H</small> ").concat(implicitH, " | <small>Total H</small> ").concat(totalH));
|
|
55
55
|
}
|
|
56
56
|
return labels.length ? labels.join('<br/>') : undefined;
|
|
57
57
|
default: return void 0;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"valence-model.js","sourceRoot":"","sources":["../../../../../../src/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,0CAA0C,CAAC;AACjF,OAAO,EAAE,oBAAoB,EAAE,MAAM,uDAAuD,CAAC;AAE7F,OAAO,EAAE,iBAAiB,EAAE,MAAM,yCAAyC,CAAC;AAC5E,OAAO,EAAE,cAAc,EAAE,MAAM,0BAA0B,CAAC;AAC1D,OAAO,EAAa,gBAAgB,EAAE,MAAM,oCAAoC,CAAC;AACjF,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,aAAa,EAAE,MAAM,4DAA4D,CAAC;AAC3F,OAAO,EAAE,WAAW,EAAE,MAAM,+BAA+B,CAAC;AAE5D,MAAM,CAAC,IAAM,YAAY,GAAG,cAAc,CAAC,MAAM,CAAgD;IAC7F,IAAI,EAAE,6BAA6B;IACnC,QAAQ,EAAE,cAAc;IACxB,OAAO,EAAE,EAAE,IAAI,EAAE,eAAe,EAAE;IAClC,IAAI;QAAgB,2BAAqE;QAAnF;YAAA,qEA4EL;YA3EW,cAAQ,GAAG,oBAAoB,CAAA;YAe/B,mBAAa,GAAG;gBACpB,KAAK,EAAE,UAAC,IAAU;oBACd,IAAI,CAAC,KAAI,CAAC,MAAM,CAAC,WAAW;wBAAE,OAAO,KAAK,CAAC,CAAC;oBAE5C,QAAQ,IAAI,CAAC,IAAI,EAAE;wBACf,KAAK,cAAc;4BACf,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;gCAAE,OAAO,KAAK,CAAC,CAAC;4BAE9C,IAAM,MAAM,GAAa,EAAE,CAAC;4BAC5B,IAAM,UAAU,GAAG,KAAI,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;4BAEtD,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;gCAAvB,IAAM,CAAC,mBAAA;gCACR,IAAM,YAAY,GAAG,KAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;gCAChD,IAAI,CAAC,YAAY;oCAAE,SAAS;gCAE5B,IAAM,CAAC,GAAG,gBAAgB,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC;gCAC/C,IAAI,CAAC,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;oCAAE,SAAS;gCAEtC,IAAM,CAAC,GAAG,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;gCACxB,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC;oCAAE,SAAS;gCAE/C,IAAM,EAAE,GAAG,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;gCACvC,IAAI,CAAC,EAAE;oCAAE,SAAS;gCAElB,IAAM,GAAG,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;gCACxC,IAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;gCAC9B,IAAM,aAAa,GAAG,EAAE,CAAC,aAAa,CAAC,GAAG,CAAC,CAAC;gCAC5C,IAAM,SAAS,GAAG,EAAE,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC;gCACpC,IAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;gCAE9B,MAAM,CAAC,IAAI,CAAC,
|
|
1
|
+
{"version":3,"file":"valence-model.js","sourceRoot":"","sources":["../../../../../../src/mol-plugin/behavior/dynamic/custom-props/computed/valence-model.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AACnD,OAAO,EAAE,eAAe,IAAI,EAAE,EAAE,MAAM,0CAA0C,CAAC;AACjF,OAAO,EAAE,oBAAoB,EAAE,MAAM,uDAAuD,CAAC;AAE7F,OAAO,EAAE,iBAAiB,EAAE,MAAM,yCAAyC,CAAC;AAC5E,OAAO,EAAE,cAAc,EAAE,MAAM,0BAA0B,CAAC;AAC1D,OAAO,EAAa,gBAAgB,EAAE,MAAM,oCAAoC,CAAC;AACjF,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,aAAa,EAAE,MAAM,4DAA4D,CAAC;AAC3F,OAAO,EAAE,WAAW,EAAE,MAAM,+BAA+B,CAAC;AAE5D,MAAM,CAAC,IAAM,YAAY,GAAG,cAAc,CAAC,MAAM,CAAgD;IAC7F,IAAI,EAAE,6BAA6B;IACnC,QAAQ,EAAE,cAAc;IACxB,OAAO,EAAE,EAAE,IAAI,EAAE,eAAe,EAAE;IAClC,IAAI;QAAgB,2BAAqE;QAAnF;YAAA,qEA4EL;YA3EW,cAAQ,GAAG,oBAAoB,CAAA;YAe/B,mBAAa,GAAG;gBACpB,KAAK,EAAE,UAAC,IAAU;oBACd,IAAI,CAAC,KAAI,CAAC,MAAM,CAAC,WAAW;wBAAE,OAAO,KAAK,CAAC,CAAC;oBAE5C,QAAQ,IAAI,CAAC,IAAI,EAAE;wBACf,KAAK,cAAc;4BACf,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;gCAAE,OAAO,KAAK,CAAC,CAAC;4BAE9C,IAAM,MAAM,GAAa,EAAE,CAAC;4BAC5B,IAAM,UAAU,GAAG,KAAI,CAAC,aAAa,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;4BAEtD,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;gCAAvB,IAAM,CAAC,mBAAA;gCACR,IAAM,YAAY,GAAG,KAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;gCAChD,IAAI,CAAC,YAAY;oCAAE,SAAS;gCAE5B,IAAM,CAAC,GAAG,gBAAgB,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC;gCAC/C,IAAI,CAAC,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC;oCAAE,SAAS;gCAEtC,IAAM,CAAC,GAAG,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC;gCACxB,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC;oCAAE,SAAS;gCAE/C,IAAM,EAAE,GAAG,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;gCACvC,IAAI,CAAC,EAAE;oCAAE,SAAS;gCAElB,IAAM,GAAG,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC;gCACxC,IAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;gCAC9B,IAAM,aAAa,GAAG,EAAE,CAAC,aAAa,CAAC,GAAG,CAAC,CAAC;gCAC5C,IAAM,SAAS,GAAG,EAAE,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC;gCACpC,IAAM,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;gCAE9B,MAAM,CAAC,IAAI,CAAC,+CAAwC,MAAM,8CAAoC,aAAa,CAAC,aAAa,CAAC,0CAAgC,SAAS,uCAA6B,MAAM,CAAE,CAAC,CAAC;6BAC7M;4BAED,OAAO,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC;wBAE5D,OAAO,CAAC,CAAC,OAAO,KAAK,CAAC,CAAC;qBAC1B;gBACL,CAAC;aACJ,CAAA;;QAsBL,CAAC;QAzEW,+BAAa,GAArB,UAAsB,SAAoB;YACtC,IAAM,UAAU,GAAgB,EAAE,CAAC;YACnC,IAAM,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,OAAO,CAAC,kBAAkB,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC;YAChE,IAAI,IAAI,EAAE;gBACN,IAAM,KAAK,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,IAAI,CAAC;gBAClC,IAAM,UAAU,GAAG,KAAK,CAAC,MAAM,CAAC,cAAc,CAAC,UAAU,CAAC,MAAM,CAAC,iBAAiB,CAAC,QAAQ,CAAC,SAAS,EAAE,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC,CAAC;gBAC5H,KAAgB,UAAU,EAAV,yBAAU,EAAV,wBAAU,EAAV,IAAU,EAAE;oBAAvB,IAAM,CAAC,mBAAA;oBACR,IAAI,CAAC,CAAC,GAAG;wBAAE,WAAW,CAAC,UAAU,EAAE,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;iBAClD;aACJ;YACD,OAAO,UAAU,CAAC;QACtB,CAAC;QA0CD,wBAAM,GAAN,UAAO,CAAgD;YACnD,IAAM,OAAO,GAAG,CACZ,IAAI,CAAC,MAAM,CAAC,UAAU,KAAK,CAAC,CAAC,UAAU;gBACvC,IAAI,CAAC,MAAM,CAAC,WAAW,KAAK,CAAC,CAAC,WAAW,CAC5C,CAAC;YACF,IAAI,CAAC,MAAM,CAAC,UAAU,GAAG,CAAC,CAAC,UAAU,CAAC;YACtC,IAAI,CAAC,MAAM,CAAC,WAAW,GAAG,CAAC,CAAC,WAAW,CAAC;YACxC,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,oBAAoB,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YAC/G,OAAO,OAAO,CAAC;QACnB,CAAC;QAED,0BAAQ,GAAR;YACI,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,QAAQ,CAAC,IAAI,CAAC,QAAQ,EAAE,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YACnF,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,WAAW,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;QACjE,CAAC;QAED,4BAAU,GAAV;YACI,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC;YAC7E,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,UAAU,CAAC,cAAc,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;QACpE,CAAC;QACL,cAAC;IAAD,CAAC,AA5EK,CAAc,cAAc,CAAC,OAAO,EA4EzC;IACD,MAAM,EAAE,cAAM,OAAA,CAAC;QACX,UAAU,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC;QAC7B,WAAW,EAAE,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC;KAChC,CAAC,EAHY,CAGZ;CACL,CAAC,CAAC"}
|
|
@@ -12,7 +12,8 @@ export declare const HighlightLoci: import("../../../mol-state/transformer").Sta
|
|
|
12
12
|
hoverHighlightOnly: Binding;
|
|
13
13
|
hoverHighlightOnlyExtend: Binding;
|
|
14
14
|
}>;
|
|
15
|
-
ignore: PD.Value<("
|
|
15
|
+
ignore: PD.Value<("element-loci" | "structure-loci" | "bond-loci" | "volume-loci" | "isosurface-loci" | "cell-loci" | "shape-loci" | "group-loci" | "every-loci" | "empty-loci" | "data-loci")[]>;
|
|
16
|
+
preferAtoms: PD.BooleanParam;
|
|
16
17
|
mark: PD.BooleanParam;
|
|
17
18
|
}>>;
|
|
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export declare const SelectLoci: import("../../../mol-state/transformer").StateTransformer<PluginBehavior.Category, PluginBehavior.Behavior, PD.Values<{
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@@ -24,7 +25,8 @@ export declare const SelectLoci: import("../../../mol-state/transformer").StateT
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clickDeselect: Binding;
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clickDeselectAllOnEmpty: Binding;
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}>;
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-
ignore: PD.Value<("
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+
ignore: PD.Value<("element-loci" | "structure-loci" | "bond-loci" | "volume-loci" | "isosurface-loci" | "cell-loci" | "shape-loci" | "group-loci" | "every-loci" | "empty-loci" | "data-loci")[]>;
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+
preferAtoms: PD.BooleanParam;
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mark: PD.BooleanParam;
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}>>;
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export declare const DefaultLociLabelProvider: import("../../../mol-state/transformer").StateTransformer<PluginBehavior.Category, PluginBehavior.Behavior, unknown>;
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