molstar 2.3.3 → 2.3.8
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +20 -20
- package/README.md +176 -176
- package/build/viewer/embedded.html +43 -43
- package/build/viewer/index.html +94 -88
- package/build/viewer/molstar.css +1 -2
- package/build/viewer/molstar.js +1 -1
- package/lib/apps/docking-viewer/index.html +36 -36
- package/lib/apps/docking-viewer/index.js +1 -1
- package/lib/apps/docking-viewer/index.js.map +1 -1
- package/lib/apps/viewer/embedded.html +43 -43
- package/lib/apps/viewer/index.d.ts +296 -5
- package/lib/apps/viewer/index.html +94 -88
- package/lib/apps/viewer/index.js +99 -9
- package/lib/apps/viewer/index.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/cli/chem-comp-dict/util.d.ts +4 -4
- package/lib/cli/chem-comp-dict/util.js +2 -2
- package/lib/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/cli/cif2bcif/converter.js +2 -2
- package/lib/cli/cif2bcif/converter.js.map +1 -1
- package/lib/cli/cifschema/index.js +12 -12
- package/lib/cli/cifschema/index.js.map +1 -1
- package/lib/cli/cifschema/util/cif-dic.js +19 -19
- package/lib/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/cli/cifschema/util/generate.js +21 -21
- package/lib/cli/cifschema/util/generate.js.map +1 -1
- package/lib/cli/cifschema/util/schema.js +1 -1
- package/lib/cli/cifschema/util/schema.js.map +1 -1
- package/lib/cli/lipid-params/index.js +3 -3
- package/lib/cli/lipid-params/index.js.map +1 -1
- package/lib/cli/state-docs/index.js +4 -4
- package/lib/cli/state-docs/index.js.map +1 -1
- package/lib/cli/state-docs/pd-to-md.js +10 -10
- package/lib/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/cli/structure-info/model.js +18 -18
- package/lib/cli/structure-info/model.js.map +1 -1
- package/lib/cli/structure-info/volume.js +1 -1
- package/lib/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js.map +1 -1
- package/lib/commonjs/apps/docking-viewer/viewport.d.ts +2 -2
- package/lib/commonjs/apps/viewer/index.d.ts +296 -5
- package/lib/commonjs/apps/viewer/index.js +99 -9
- package/lib/commonjs/apps/viewer/index.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/commonjs/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/util.d.ts +6 -6
- package/lib/commonjs/cli/chem-comp-dict/util.js +2 -2
- package/lib/commonjs/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/commonjs/cli/cif2bcif/converter.js +2 -2
- package/lib/commonjs/cli/cif2bcif/converter.js.map +1 -1
- package/lib/commonjs/cli/cif2bcif/index.js +0 -0
- package/lib/commonjs/cli/cifschema/index.js +12 -12
- package/lib/commonjs/cli/cifschema/index.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/cif-dic.js +19 -19
- package/lib/commonjs/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/generate.js +21 -21
- package/lib/commonjs/cli/cifschema/util/generate.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js.map +1 -1
- package/lib/commonjs/cli/lipid-params/index.js +3 -3
- package/lib/commonjs/cli/lipid-params/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/index.js +4 -4
- package/lib/commonjs/cli/state-docs/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/pd-to-md.js +10 -10
- package/lib/commonjs/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/commonjs/cli/structure-info/model.js +18 -18
- package/lib/commonjs/cli/structure-info/model.js.map +1 -1
- package/lib/commonjs/cli/structure-info/volume.js +1 -1
- package/lib/commonjs/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/examples/basic-wrapper/superposition.js +3 -3
- package/lib/commonjs/examples/basic-wrapper/superposition.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/mapping.js +2 -2
- package/lib/commonjs/examples/domain-annotation-server/mapping.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/server.js +3 -3
- package/lib/commonjs/examples/domain-annotation-server/server.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js +3 -3
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/index.js +2 -2
- package/lib/commonjs/examples/proteopedia-wrapper/index.js.map +1 -1
- package/lib/commonjs/examples/task.js +6 -6
- package/lib/commonjs/examples/task.js.map +1 -1
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js +2 -2
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js.map +1 -1
- package/lib/commonjs/extensions/anvil/behavior.d.ts +2 -2
- package/lib/commonjs/extensions/anvil/representation.d.ts +5 -5
- package/lib/commonjs/extensions/anvil/representation.js +1 -1
- package/lib/commonjs/extensions/anvil/representation.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/color/generate.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/color/generate.js +1 -1
- package/lib/commonjs/extensions/cellpack/color/provided.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/color/provided.js +1 -1
- package/lib/commonjs/extensions/cellpack/curve.d.ts +2 -2
- package/lib/commonjs/extensions/cellpack/curve.js +2 -2
- package/lib/commonjs/extensions/cellpack/data.d.ts +32 -0
- package/lib/commonjs/extensions/cellpack/index.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/index.js +1 -1
- package/lib/commonjs/extensions/cellpack/model.d.ts +5 -3
- package/lib/commonjs/extensions/cellpack/model.js +203 -65
- package/lib/commonjs/extensions/cellpack/model.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/preset.d.ts +2 -1
- package/lib/commonjs/extensions/cellpack/preset.js +12 -15
- package/lib/commonjs/extensions/cellpack/preset.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/property.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/property.js +1 -1
- package/lib/commonjs/extensions/cellpack/representation.d.ts +53 -0
- package/lib/commonjs/extensions/cellpack/representation.js +47 -0
- package/lib/commonjs/extensions/cellpack/representation.js.map +1 -0
- package/lib/commonjs/extensions/cellpack/state.d.ts +16 -5
- package/lib/commonjs/extensions/cellpack/state.js +234 -27
- package/lib/commonjs/extensions/cellpack/state.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/util.d.ts +3 -1
- package/lib/commonjs/extensions/cellpack/util.js +34 -6
- package/lib/commonjs/extensions/cellpack/util.js.map +1 -1
- package/lib/commonjs/extensions/dnatco/confal-pyramids/behavior.d.ts +1 -1
- package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +6 -6
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js +7 -7
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js.map +1 -1
- package/lib/commonjs/extensions/g3d/data.js +2 -2
- package/lib/commonjs/extensions/g3d/data.js.map +1 -1
- package/lib/commonjs/extensions/g3d/model.js +2 -2
- package/lib/commonjs/extensions/g3d/model.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/controls.js +2 -2
- package/lib/commonjs/extensions/geo-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/glb-exporter.js +1 -1
- package/lib/commonjs/extensions/geo-export/glb-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/mesh-exporter.d.ts +1 -1
- package/lib/commonjs/extensions/geo-export/obj-exporter.js +3 -3
- package/lib/commonjs/extensions/geo-export/obj-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js +5 -5
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js.map +1 -1
- package/lib/commonjs/extensions/mp4-export/controls.js +1 -1
- package/lib/commonjs/extensions/mp4-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +6 -6
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js +3 -3
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.d.ts +12 -12
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js +7 -7
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.d.ts +3 -3
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js +11 -11
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +25 -10
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js +4 -4
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/camera/util.d.ts +4 -3
- package/lib/commonjs/mol-canvas3d/camera/util.js +15 -16
- package/lib/commonjs/mol-canvas3d/camera/util.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/camera.d.ts +11 -3
- package/lib/commonjs/mol-canvas3d/camera.js +21 -1
- package/lib/commonjs/mol-canvas3d/camera.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +18 -8
- package/lib/commonjs/mol-canvas3d/canvas3d.js +11 -5
- package/lib/commonjs/mol-canvas3d/canvas3d.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/controls/trackball.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +3 -3
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +1 -1
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js +1 -1
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/helper/interaction-events.d.ts +13 -4
- package/lib/commonjs/mol-canvas3d/helper/interaction-events.js +43 -9
- package/lib/commonjs/mol-canvas3d/helper/interaction-events.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/draw.js +1 -0
- package/lib/commonjs/mol-canvas3d/passes/draw.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/image.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/passes/pick.d.ts +5 -2
- package/lib/commonjs/mol-canvas3d/passes/pick.js +17 -3
- package/lib/commonjs/mol-canvas3d/passes/pick.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/wboit.js +1 -1
- package/lib/commonjs/mol-canvas3d/passes/wboit.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/util.js +1 -1
- package/lib/commonjs/mol-canvas3d/util.js.map +1 -1
- package/lib/commonjs/mol-data/db/table.js +1 -1
- package/lib/commonjs/mol-data/db/table.js.map +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js.map +1 -1
- package/lib/commonjs/mol-data/int/impl/ordered-set.d.ts +3 -3
- package/lib/commonjs/mol-data/int/impl/sorted-array.d.ts +1 -1
- package/lib/commonjs/mol-data/int/impl/sorted-array.js +2 -2
- package/lib/commonjs/mol-data/int/impl/sorted-array.js.map +1 -1
- package/lib/commonjs/mol-data/int/tuple.js +1 -1
- package/lib/commonjs/mol-data/int/tuple.js.map +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/base.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js +10 -1
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/image/image.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/image/image.js +4 -1
- package/lib/commonjs/mol-geo/geometry/image/image.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/lines/lines.js +1 -1
- package/lib/commonjs/mol-geo/geometry/lines/lines.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.js +19 -11
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.d.ts +2 -2
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js +57 -15
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/points/points.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/points/points.js +1 -1
- package/lib/commonjs/mol-geo/geometry/points/points.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +2 -1
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js +1 -1
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/text/text.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/text/text.js +1 -1
- package/lib/commonjs/mol-geo/geometry/text/text.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +6 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js.map +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/cylinders.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/cylinders.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/cylinders.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/direct-volume.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/direct-volume.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/direct-volume.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/gl.d.ts +9 -0
- package/lib/commonjs/mol-gl/_spec/gl.js +33 -0
- package/lib/commonjs/mol-gl/_spec/gl.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/gl.shim.js +5 -5
- package/lib/commonjs/mol-gl/_spec/gl.shim.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/image.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/image.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/image.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/lines.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/lines.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/lines.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/mesh.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/mesh.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/mesh.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/points.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/points.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/points.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/renderer.spec.d.ts +7 -1
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js +6 -44
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/spheres.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/spheres.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/spheres.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/text.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/text.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/text.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/compute/grid3d.js +3 -3
- package/lib/commonjs/mol-gl/compute/grid3d.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js +4 -4
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js.map +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js.map +1 -1
- package/lib/commonjs/mol-gl/renderer.d.ts +3 -2
- package/lib/commonjs/mol-gl/renderer.js +3 -0
- package/lib/commonjs/mol-gl/renderer.js.map +1 -1
- package/lib/commonjs/mol-gl/scene.js +1 -1
- package/lib/commonjs/mol-gl/scene.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/lines.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/lines.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader/lines.vert.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/points.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/points.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader/points.vert.js.map +1 -1
- package/lib/commonjs/mol-gl/shader-code.js +8 -8
- package/lib/commonjs/mol-gl/shader-code.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/buffer.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/buffer.js +5 -5
- package/lib/commonjs/mol-gl/webgl/buffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/compat.js +3 -3
- package/lib/commonjs/mol-gl/webgl/compat.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/context.js +6 -4
- package/lib/commonjs/mol-gl/webgl/context.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/program.d.ts +1 -1
- package/lib/commonjs/mol-gl/webgl/program.js +14 -12
- package/lib/commonjs/mol-gl/webgl/program.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/render-item.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/render-item.js +6 -3
- package/lib/commonjs/mol-gl/webgl/render-item.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/resources.js +1 -1
- package/lib/commonjs/mol-gl/webgl/resources.js.map +1 -1
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tryUseImpostor: PD.BooleanParam;
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detail: PD.Numeric;
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}, "backbone">;
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@@ -10,19 +10,23 @@ import { ThemeRegistryContext } from '../../../mol-theme/theme';
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10
10
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import { Structure } from '../../../mol-model/structure';
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export declare const BallAndStickParams: {
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includeParent: PD.BooleanParam;
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-
unitKinds: PD.MultiSelect<"spheres" | "
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
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tryUseImpostor: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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-
includeTypes: PD.MultiSelect<"
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-
excludeTypes: PD.MultiSelect<"
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+
includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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+
excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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ignoreHydrogens: PD.BooleanParam;
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aromaticBonds: PD.BooleanParam;
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+
multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
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linkScale: PD.Numeric;
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linkSpacing: PD.Numeric;
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linkCap: PD.BooleanParam;
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+
aromaticScale: PD.Numeric;
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+
aromaticSpacing: PD.Numeric;
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+
aromaticDashCount: PD.Numeric;
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dashCount: PD.Numeric;
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dashScale: PD.Numeric;
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dashCap: PD.BooleanParam;
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@@ -32,7 +36,7 @@ export declare const BallAndStickParams: {
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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-
quality: PD.Select<"
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+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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flipSided: PD.BooleanParam;
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flatShaded: PD.BooleanParam;
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traceOnly: PD.BooleanParam;
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@@ -41,19 +45,23 @@ export declare const BallAndStickParams: {
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export declare type BallAndStickParams = typeof BallAndStickParams;
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export declare function getBallAndStickParams(ctx: ThemeRegistryContext, structure: Structure): {
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includeParent: PD.BooleanParam;
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-
unitKinds: PD.MultiSelect<"spheres" | "
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
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tryUseImpostor: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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|
-
includeTypes: PD.MultiSelect<"
|
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|
-
excludeTypes: PD.MultiSelect<"
|
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|
+
includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
|
55
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+
excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
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56
|
ignoreHydrogens: PD.BooleanParam;
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aromaticBonds: PD.BooleanParam;
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58
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+
multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
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|
linkScale: PD.Numeric;
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|
linkSpacing: PD.Numeric;
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|
linkCap: PD.BooleanParam;
|
|
62
|
+
aromaticScale: PD.Numeric;
|
|
63
|
+
aromaticSpacing: PD.Numeric;
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|
64
|
+
aromaticDashCount: PD.Numeric;
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65
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dashCount: PD.Numeric;
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66
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dashScale: PD.Numeric;
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59
67
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dashCap: PD.BooleanParam;
|
|
@@ -63,7 +71,7 @@ export declare function getBallAndStickParams(ctx: ThemeRegistryContext, structu
|
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63
71
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ignoreLight: PD.BooleanParam;
|
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64
72
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xrayShaded: PD.BooleanParam;
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65
73
|
alpha: PD.Numeric;
|
|
66
|
-
quality: PD.Select<"
|
|
74
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
67
75
|
flipSided: PD.BooleanParam;
|
|
68
76
|
flatShaded: PD.BooleanParam;
|
|
69
77
|
traceOnly: PD.BooleanParam;
|
|
@@ -73,19 +81,23 @@ export declare type BallAndStickRepresentation = StructureRepresentation<BallAnd
|
|
|
73
81
|
export declare function BallAndStickRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, BallAndStickParams>): BallAndStickRepresentation;
|
|
74
82
|
export declare const BallAndStickRepresentationProvider: StructureRepresentationProvider<{
|
|
75
83
|
includeParent: PD.BooleanParam;
|
|
76
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
84
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
77
85
|
sizeFactor: PD.Numeric;
|
|
78
86
|
sizeAspectRatio: PD.Numeric;
|
|
79
87
|
visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
|
|
80
88
|
tryUseImpostor: PD.BooleanParam;
|
|
81
89
|
adjustCylinderLength: PD.BooleanParam;
|
|
82
|
-
includeTypes: PD.MultiSelect<"
|
|
83
|
-
excludeTypes: PD.MultiSelect<"
|
|
90
|
+
includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
|
91
|
+
excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
|
84
92
|
ignoreHydrogens: PD.BooleanParam;
|
|
85
93
|
aromaticBonds: PD.BooleanParam;
|
|
94
|
+
multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
|
|
86
95
|
linkScale: PD.Numeric;
|
|
87
96
|
linkSpacing: PD.Numeric;
|
|
88
97
|
linkCap: PD.BooleanParam;
|
|
98
|
+
aromaticScale: PD.Numeric;
|
|
99
|
+
aromaticSpacing: PD.Numeric;
|
|
100
|
+
aromaticDashCount: PD.Numeric;
|
|
89
101
|
dashCount: PD.Numeric;
|
|
90
102
|
dashScale: PD.Numeric;
|
|
91
103
|
dashCap: PD.BooleanParam;
|
|
@@ -95,7 +107,7 @@ export declare const BallAndStickRepresentationProvider: StructureRepresentation
|
|
|
95
107
|
ignoreLight: PD.BooleanParam;
|
|
96
108
|
xrayShaded: PD.BooleanParam;
|
|
97
109
|
alpha: PD.Numeric;
|
|
98
|
-
quality: PD.Select<"
|
|
110
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
99
111
|
flipSided: PD.BooleanParam;
|
|
100
112
|
flatShaded: PD.BooleanParam;
|
|
101
113
|
traceOnly: PD.BooleanParam;
|
|
@@ -14,12 +14,15 @@ export declare const CarbohydrateParams: {
|
|
|
14
14
|
linkScale: PD.Numeric;
|
|
15
15
|
linkSpacing: PD.Numeric;
|
|
16
16
|
linkCap: PD.BooleanParam;
|
|
17
|
+
aromaticScale: PD.Numeric;
|
|
18
|
+
aromaticSpacing: PD.Numeric;
|
|
19
|
+
aromaticDashCount: PD.Numeric;
|
|
17
20
|
dashCount: PD.Numeric;
|
|
18
21
|
dashScale: PD.Numeric;
|
|
19
22
|
dashCap: PD.BooleanParam;
|
|
20
23
|
stubCap: PD.BooleanParam;
|
|
21
24
|
radialSegments: PD.Numeric;
|
|
22
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
25
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
23
26
|
includeParent: PD.BooleanParam;
|
|
24
27
|
doubleSided: PD.BooleanParam;
|
|
25
28
|
flipSided: PD.BooleanParam;
|
|
@@ -27,7 +30,7 @@ export declare const CarbohydrateParams: {
|
|
|
27
30
|
ignoreLight: PD.BooleanParam;
|
|
28
31
|
xrayShaded: PD.BooleanParam;
|
|
29
32
|
alpha: PD.Numeric;
|
|
30
|
-
quality: PD.Select<"
|
|
33
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
31
34
|
linkSizeFactor: PD.Numeric;
|
|
32
35
|
detail: PD.Numeric;
|
|
33
36
|
sizeFactor: PD.Numeric;
|
|
@@ -39,12 +42,15 @@ export declare function getCarbohydrateParams(ctx: ThemeRegistryContext, structu
|
|
|
39
42
|
linkScale: PD.Numeric;
|
|
40
43
|
linkSpacing: PD.Numeric;
|
|
41
44
|
linkCap: PD.BooleanParam;
|
|
45
|
+
aromaticScale: PD.Numeric;
|
|
46
|
+
aromaticSpacing: PD.Numeric;
|
|
47
|
+
aromaticDashCount: PD.Numeric;
|
|
42
48
|
dashCount: PD.Numeric;
|
|
43
49
|
dashScale: PD.Numeric;
|
|
44
50
|
dashCap: PD.BooleanParam;
|
|
45
51
|
stubCap: PD.BooleanParam;
|
|
46
52
|
radialSegments: PD.Numeric;
|
|
47
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
53
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
48
54
|
includeParent: PD.BooleanParam;
|
|
49
55
|
doubleSided: PD.BooleanParam;
|
|
50
56
|
flipSided: PD.BooleanParam;
|
|
@@ -52,7 +58,7 @@ export declare function getCarbohydrateParams(ctx: ThemeRegistryContext, structu
|
|
|
52
58
|
ignoreLight: PD.BooleanParam;
|
|
53
59
|
xrayShaded: PD.BooleanParam;
|
|
54
60
|
alpha: PD.Numeric;
|
|
55
|
-
quality: PD.Select<"
|
|
61
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
56
62
|
linkSizeFactor: PD.Numeric;
|
|
57
63
|
detail: PD.Numeric;
|
|
58
64
|
sizeFactor: PD.Numeric;
|
|
@@ -65,12 +71,15 @@ export declare const CarbohydrateRepresentationProvider: StructureRepresentation
|
|
|
65
71
|
linkScale: PD.Numeric;
|
|
66
72
|
linkSpacing: PD.Numeric;
|
|
67
73
|
linkCap: PD.BooleanParam;
|
|
74
|
+
aromaticScale: PD.Numeric;
|
|
75
|
+
aromaticSpacing: PD.Numeric;
|
|
76
|
+
aromaticDashCount: PD.Numeric;
|
|
68
77
|
dashCount: PD.Numeric;
|
|
69
78
|
dashScale: PD.Numeric;
|
|
70
79
|
dashCap: PD.BooleanParam;
|
|
71
80
|
stubCap: PD.BooleanParam;
|
|
72
81
|
radialSegments: PD.Numeric;
|
|
73
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
82
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
74
83
|
includeParent: PD.BooleanParam;
|
|
75
84
|
doubleSided: PD.BooleanParam;
|
|
76
85
|
flipSided: PD.BooleanParam;
|
|
@@ -78,7 +87,7 @@ export declare const CarbohydrateRepresentationProvider: StructureRepresentation
|
|
|
78
87
|
ignoreLight: PD.BooleanParam;
|
|
79
88
|
xrayShaded: PD.BooleanParam;
|
|
80
89
|
alpha: PD.Numeric;
|
|
81
|
-
quality: PD.Select<"
|
|
90
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
82
91
|
linkSizeFactor: PD.Numeric;
|
|
83
92
|
detail: PD.Numeric;
|
|
84
93
|
sizeFactor: PD.Numeric;
|
|
@@ -11,7 +11,7 @@ import { StructureRepresentation, StructureRepresentationProvider } from '../rep
|
|
|
11
11
|
export declare const CartoonParams: {
|
|
12
12
|
sizeFactor: PD.Numeric;
|
|
13
13
|
visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
|
|
14
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
14
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
15
15
|
includeParent: PD.BooleanParam;
|
|
16
16
|
doubleSided: PD.BooleanParam;
|
|
17
17
|
flipSided: PD.BooleanParam;
|
|
@@ -19,19 +19,20 @@ export declare const CartoonParams: {
|
|
|
19
19
|
ignoreLight: PD.BooleanParam;
|
|
20
20
|
xrayShaded: PD.BooleanParam;
|
|
21
21
|
alpha: PD.Numeric;
|
|
22
|
-
quality: PD.Select<"
|
|
22
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
23
23
|
radialSegments: PD.Numeric;
|
|
24
24
|
detail: PD.Numeric;
|
|
25
25
|
aspectRatio: PD.Numeric;
|
|
26
26
|
arrowFactor: PD.Numeric;
|
|
27
27
|
tubularHelices: PD.BooleanParam;
|
|
28
|
+
helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
|
|
28
29
|
linearSegments: PD.Numeric;
|
|
29
30
|
};
|
|
30
31
|
export declare type CartoonParams = typeof CartoonParams;
|
|
31
32
|
export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: Structure): {
|
|
32
33
|
sizeFactor: PD.Numeric;
|
|
33
34
|
visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
|
|
34
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
35
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
35
36
|
includeParent: PD.BooleanParam;
|
|
36
37
|
doubleSided: PD.BooleanParam;
|
|
37
38
|
flipSided: PD.BooleanParam;
|
|
@@ -39,12 +40,13 @@ export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: S
|
|
|
39
40
|
ignoreLight: PD.BooleanParam;
|
|
40
41
|
xrayShaded: PD.BooleanParam;
|
|
41
42
|
alpha: PD.Numeric;
|
|
42
|
-
quality: PD.Select<"
|
|
43
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
43
44
|
radialSegments: PD.Numeric;
|
|
44
45
|
detail: PD.Numeric;
|
|
45
46
|
aspectRatio: PD.Numeric;
|
|
46
47
|
arrowFactor: PD.Numeric;
|
|
47
48
|
tubularHelices: PD.BooleanParam;
|
|
49
|
+
helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
|
|
48
50
|
linearSegments: PD.Numeric;
|
|
49
51
|
};
|
|
50
52
|
export declare type CartoonRepresentation = StructureRepresentation<CartoonParams>;
|
|
@@ -52,7 +54,7 @@ export declare function CartoonRepresentation(ctx: RepresentationContext, getPar
|
|
|
52
54
|
export declare const CartoonRepresentationProvider: StructureRepresentationProvider<{
|
|
53
55
|
sizeFactor: PD.Numeric;
|
|
54
56
|
visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
|
|
55
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
57
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
56
58
|
includeParent: PD.BooleanParam;
|
|
57
59
|
doubleSided: PD.BooleanParam;
|
|
58
60
|
flipSided: PD.BooleanParam;
|
|
@@ -60,11 +62,12 @@ export declare const CartoonRepresentationProvider: StructureRepresentationProvi
|
|
|
60
62
|
ignoreLight: PD.BooleanParam;
|
|
61
63
|
xrayShaded: PD.BooleanParam;
|
|
62
64
|
alpha: PD.Numeric;
|
|
63
|
-
quality: PD.Select<"
|
|
65
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
64
66
|
radialSegments: PD.Numeric;
|
|
65
67
|
detail: PD.Numeric;
|
|
66
68
|
aspectRatio: PD.Numeric;
|
|
67
69
|
arrowFactor: PD.Numeric;
|
|
68
70
|
tubularHelices: PD.BooleanParam;
|
|
71
|
+
helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
|
|
69
72
|
linearSegments: PD.Numeric;
|
|
70
73
|
}, "cartoon">;
|
|
@@ -11,18 +11,22 @@ import { StructureRepresentation, StructureRepresentationProvider } from '../../
|
|
|
11
11
|
export declare const EllipsoidParams: {
|
|
12
12
|
includeParent: PD.BooleanParam;
|
|
13
13
|
adjustCylinderLength: PD.BooleanParam;
|
|
14
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
14
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
15
15
|
sizeFactor: PD.Numeric;
|
|
16
16
|
sizeAspectRatio: PD.Numeric;
|
|
17
17
|
linkCap: PD.BooleanParam;
|
|
18
18
|
visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "ellipsoid-mesh">;
|
|
19
19
|
tryUseImpostor: PD.BooleanParam;
|
|
20
|
-
includeTypes: PD.MultiSelect<"
|
|
21
|
-
excludeTypes: PD.MultiSelect<"
|
|
20
|
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includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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ignoreHydrogens: PD.BooleanParam;
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aromaticBonds: PD.BooleanParam;
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multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
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linkScale: PD.Numeric;
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linkSpacing: PD.Numeric;
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aromaticScale: PD.Numeric;
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aromaticSpacing: PD.Numeric;
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aromaticDashCount: PD.Numeric;
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dashCount: PD.Numeric;
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dashScale: PD.Numeric;
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dashCap: PD.BooleanParam;
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@@ -32,7 +36,7 @@ export declare const EllipsoidParams: {
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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flipSided: PD.BooleanParam;
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flatShaded: PD.BooleanParam;
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detail: PD.Numeric;
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@@ -41,18 +45,22 @@ export declare type EllipsoidParams = typeof EllipsoidParams;
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export declare function getEllipsoidParams(ctx: ThemeRegistryContext, structure: Structure): {
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includeParent: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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unitKinds: PD.MultiSelect<"spheres" | "
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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linkCap: PD.BooleanParam;
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visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "ellipsoid-mesh">;
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tryUseImpostor: PD.BooleanParam;
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includeTypes: PD.MultiSelect<"
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-
excludeTypes: PD.MultiSelect<"
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includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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ignoreHydrogens: PD.BooleanParam;
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aromaticBonds: PD.BooleanParam;
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multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
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linkScale: PD.Numeric;
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linkSpacing: PD.Numeric;
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aromaticScale: PD.Numeric;
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aromaticSpacing: PD.Numeric;
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aromaticDashCount: PD.Numeric;
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dashCount: PD.Numeric;
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dashScale: PD.Numeric;
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dashCap: PD.BooleanParam;
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@@ -62,7 +70,7 @@ export declare function getEllipsoidParams(ctx: ThemeRegistryContext, structure:
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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-
quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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flipSided: PD.BooleanParam;
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flatShaded: PD.BooleanParam;
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detail: PD.Numeric;
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|
@@ -72,18 +80,22 @@ export declare function EllipsoidRepresentation(ctx: RepresentationContext, getP
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export declare const EllipsoidRepresentationProvider: StructureRepresentationProvider<{
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includeParent: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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-
unitKinds: PD.MultiSelect<"spheres" | "
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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linkCap: PD.BooleanParam;
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visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "ellipsoid-mesh">;
|
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tryUseImpostor: PD.BooleanParam;
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|
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-
includeTypes: PD.MultiSelect<"
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|
82
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-
excludeTypes: PD.MultiSelect<"
|
|
89
|
+
includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
|
90
|
+
excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
|
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|
ignoreHydrogens: PD.BooleanParam;
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|
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aromaticBonds: PD.BooleanParam;
|
|
93
|
+
multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
|
|
85
94
|
linkScale: PD.Numeric;
|
|
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95
|
linkSpacing: PD.Numeric;
|
|
96
|
+
aromaticScale: PD.Numeric;
|
|
97
|
+
aromaticSpacing: PD.Numeric;
|
|
98
|
+
aromaticDashCount: PD.Numeric;
|
|
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|
dashCount: PD.Numeric;
|
|
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100
|
dashScale: PD.Numeric;
|
|
89
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|
dashCap: PD.BooleanParam;
|
|
@@ -93,7 +105,7 @@ export declare const EllipsoidRepresentationProvider: StructureRepresentationPro
|
|
|
93
105
|
ignoreLight: PD.BooleanParam;
|
|
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106
|
xrayShaded: PD.BooleanParam;
|
|
95
107
|
alpha: PD.Numeric;
|
|
96
|
-
quality: PD.Select<"
|
|
108
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
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109
|
flipSided: PD.BooleanParam;
|
|
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110
|
flatShaded: PD.BooleanParam;
|
|
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111
|
detail: PD.Numeric;
|
|
@@ -18,9 +18,9 @@ export declare const GaussianSurfaceParams: {
|
|
|
18
18
|
resolution: PD.Numeric;
|
|
19
19
|
radiusOffset: PD.Numeric;
|
|
20
20
|
smoothness: PD.Numeric;
|
|
21
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
21
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
22
22
|
alpha: PD.Numeric;
|
|
23
|
-
quality: PD.Select<"
|
|
23
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
24
24
|
tryUseGpu: PD.BooleanParam;
|
|
25
25
|
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
|
|
26
26
|
resolutionFactor: number;
|
|
@@ -43,9 +43,9 @@ export declare function getGaussianSurfaceParams(ctx: ThemeRegistryContext, stru
|
|
|
43
43
|
resolution: PD.Numeric;
|
|
44
44
|
radiusOffset: PD.Numeric;
|
|
45
45
|
smoothness: PD.Numeric;
|
|
46
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
46
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
47
47
|
alpha: PD.Numeric;
|
|
48
|
-
quality: PD.Select<"
|
|
48
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
49
49
|
tryUseGpu: PD.BooleanParam;
|
|
50
50
|
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
|
|
51
51
|
resolutionFactor: number;
|
|
@@ -69,9 +69,9 @@ export declare const GaussianSurfaceRepresentationProvider: StructureRepresentat
|
|
|
69
69
|
resolution: PD.Numeric;
|
|
70
70
|
radiusOffset: PD.Numeric;
|
|
71
71
|
smoothness: PD.Numeric;
|
|
72
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
72
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
73
73
|
alpha: PD.Numeric;
|
|
74
|
-
quality: PD.Select<"
|
|
74
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
75
75
|
tryUseGpu: PD.BooleanParam;
|
|
76
76
|
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "off"> | PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
|
|
77
77
|
resolutionFactor: number;
|
|
@@ -16,7 +16,7 @@ export declare const GaussianVolumeParams: {
|
|
|
16
16
|
resolution: PD.Numeric;
|
|
17
17
|
radiusOffset: PD.Numeric;
|
|
18
18
|
smoothness: PD.Numeric;
|
|
19
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
19
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
20
20
|
doubleSided: PD.BooleanParam;
|
|
21
21
|
flipSided: PD.BooleanParam;
|
|
22
22
|
flatShaded: PD.BooleanParam;
|
|
@@ -25,7 +25,7 @@ export declare const GaussianVolumeParams: {
|
|
|
25
25
|
renderMode: PD.Mapped<PD.NamedParams<PD.Normalize<{
|
|
26
26
|
controlPoints: import("../../../mol-math/linear-algebra/3d/vec2").Vec2[];
|
|
27
27
|
list: {
|
|
28
|
-
kind: "
|
|
28
|
+
kind: "set" | "interpolate";
|
|
29
29
|
colors: import("../../../mol-util/color/color").ColorListEntry[];
|
|
30
30
|
};
|
|
31
31
|
}>, "volume"> | PD.NamedParams<PD.Normalize<{
|
|
@@ -41,7 +41,7 @@ export declare const GaussianVolumeParams: {
|
|
|
41
41
|
stepsPerCell: PD.Numeric;
|
|
42
42
|
jumpLength: PD.Numeric;
|
|
43
43
|
alpha: PD.Numeric;
|
|
44
|
-
quality: PD.Select<"
|
|
44
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
45
45
|
};
|
|
46
46
|
export declare type GaussianVolumeParams = typeof GaussianVolumeParams;
|
|
47
47
|
export declare function getGaussianVolumeParams(ctx: ThemeRegistryContext, structure: Structure): {
|
|
@@ -52,7 +52,7 @@ export declare function getGaussianVolumeParams(ctx: ThemeRegistryContext, struc
|
|
|
52
52
|
resolution: PD.Numeric;
|
|
53
53
|
radiusOffset: PD.Numeric;
|
|
54
54
|
smoothness: PD.Numeric;
|
|
55
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
55
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
56
56
|
doubleSided: PD.BooleanParam;
|
|
57
57
|
flipSided: PD.BooleanParam;
|
|
58
58
|
flatShaded: PD.BooleanParam;
|
|
@@ -61,7 +61,7 @@ export declare function getGaussianVolumeParams(ctx: ThemeRegistryContext, struc
|
|
|
61
61
|
renderMode: PD.Mapped<PD.NamedParams<PD.Normalize<{
|
|
62
62
|
controlPoints: import("../../../mol-math/linear-algebra/3d/vec2").Vec2[];
|
|
63
63
|
list: {
|
|
64
|
-
kind: "
|
|
64
|
+
kind: "set" | "interpolate";
|
|
65
65
|
colors: import("../../../mol-util/color/color").ColorListEntry[];
|
|
66
66
|
};
|
|
67
67
|
}>, "volume"> | PD.NamedParams<PD.Normalize<{
|
|
@@ -77,7 +77,7 @@ export declare function getGaussianVolumeParams(ctx: ThemeRegistryContext, struc
|
|
|
77
77
|
stepsPerCell: PD.Numeric;
|
|
78
78
|
jumpLength: PD.Numeric;
|
|
79
79
|
alpha: PD.Numeric;
|
|
80
|
-
quality: PD.Select<"
|
|
80
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
81
81
|
};
|
|
82
82
|
export declare type GaussianVolumeRepresentation = StructureRepresentation<GaussianVolumeParams>;
|
|
83
83
|
export declare function GaussianVolumeRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, GaussianVolumeParams>): GaussianVolumeRepresentation;
|
|
@@ -89,7 +89,7 @@ export declare const GaussianVolumeRepresentationProvider: StructureRepresentati
|
|
|
89
89
|
resolution: PD.Numeric;
|
|
90
90
|
radiusOffset: PD.Numeric;
|
|
91
91
|
smoothness: PD.Numeric;
|
|
92
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
92
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
93
93
|
doubleSided: PD.BooleanParam;
|
|
94
94
|
flipSided: PD.BooleanParam;
|
|
95
95
|
flatShaded: PD.BooleanParam;
|
|
@@ -98,7 +98,7 @@ export declare const GaussianVolumeRepresentationProvider: StructureRepresentati
|
|
|
98
98
|
renderMode: PD.Mapped<PD.NamedParams<PD.Normalize<{
|
|
99
99
|
controlPoints: import("../../../mol-math/linear-algebra/3d/vec2").Vec2[];
|
|
100
100
|
list: {
|
|
101
|
-
kind: "
|
|
101
|
+
kind: "set" | "interpolate";
|
|
102
102
|
colors: import("../../../mol-util/color/color").ColorListEntry[];
|
|
103
103
|
};
|
|
104
104
|
}>, "volume"> | PD.NamedParams<PD.Normalize<{
|
|
@@ -114,5 +114,5 @@ export declare const GaussianVolumeRepresentationProvider: StructureRepresentati
|
|
|
114
114
|
stepsPerCell: PD.Numeric;
|
|
115
115
|
jumpLength: PD.Numeric;
|
|
116
116
|
alpha: PD.Numeric;
|
|
117
|
-
quality: PD.Select<"
|
|
117
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
118
118
|
}, "gaussian-volume">;
|
|
@@ -14,11 +14,11 @@ export declare const LabelParams: {
|
|
|
14
14
|
backgroundMargin: PD.Numeric;
|
|
15
15
|
backgroundColor: PD.Color;
|
|
16
16
|
backgroundOpacity: PD.Numeric;
|
|
17
|
-
level: PD.Select<"
|
|
17
|
+
level: PD.Select<"element" | "residue" | "chain">;
|
|
18
18
|
chainScale: PD.Numeric;
|
|
19
19
|
residueScale: PD.Numeric;
|
|
20
20
|
elementScale: PD.Numeric;
|
|
21
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
21
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
22
22
|
includeParent: PD.BooleanParam;
|
|
23
23
|
sizeFactor: PD.Numeric;
|
|
24
24
|
borderWidth: PD.Numeric;
|
|
@@ -36,7 +36,7 @@ export declare const LabelParams: {
|
|
|
36
36
|
fontVariant: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontVariant>;
|
|
37
37
|
fontWeight: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontWeight>;
|
|
38
38
|
alpha: PD.Numeric;
|
|
39
|
-
quality: PD.Select<"
|
|
39
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
40
40
|
};
|
|
41
41
|
export declare type LabelParams = typeof LabelParams;
|
|
42
42
|
export declare function getLabelParams(ctx: ThemeRegistryContext, structure: Structure): {
|
|
@@ -45,11 +45,11 @@ export declare function getLabelParams(ctx: ThemeRegistryContext, structure: Str
|
|
|
45
45
|
backgroundMargin: PD.Numeric;
|
|
46
46
|
backgroundColor: PD.Color;
|
|
47
47
|
backgroundOpacity: PD.Numeric;
|
|
48
|
-
level: PD.Select<"
|
|
48
|
+
level: PD.Select<"element" | "residue" | "chain">;
|
|
49
49
|
chainScale: PD.Numeric;
|
|
50
50
|
residueScale: PD.Numeric;
|
|
51
51
|
elementScale: PD.Numeric;
|
|
52
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
52
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
53
53
|
includeParent: PD.BooleanParam;
|
|
54
54
|
sizeFactor: PD.Numeric;
|
|
55
55
|
borderWidth: PD.Numeric;
|
|
@@ -67,7 +67,7 @@ export declare function getLabelParams(ctx: ThemeRegistryContext, structure: Str
|
|
|
67
67
|
fontVariant: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontVariant>;
|
|
68
68
|
fontWeight: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontWeight>;
|
|
69
69
|
alpha: PD.Numeric;
|
|
70
|
-
quality: PD.Select<"
|
|
70
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
71
71
|
};
|
|
72
72
|
export declare type LabelRepresentation = StructureRepresentation<LabelParams>;
|
|
73
73
|
export declare function LabelRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, LabelParams>): LabelRepresentation;
|
|
@@ -77,11 +77,11 @@ export declare const LabelRepresentationProvider: StructureRepresentationProvide
|
|
|
77
77
|
backgroundMargin: PD.Numeric;
|
|
78
78
|
backgroundColor: PD.Color;
|
|
79
79
|
backgroundOpacity: PD.Numeric;
|
|
80
|
-
level: PD.Select<"
|
|
80
|
+
level: PD.Select<"element" | "residue" | "chain">;
|
|
81
81
|
chainScale: PD.Numeric;
|
|
82
82
|
residueScale: PD.Numeric;
|
|
83
83
|
elementScale: PD.Numeric;
|
|
84
|
-
unitKinds: PD.MultiSelect<"spheres" | "
|
|
84
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
85
85
|
includeParent: PD.BooleanParam;
|
|
86
86
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sizeFactor: PD.Numeric;
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87
87
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borderWidth: PD.Numeric;
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@@ -99,5 +99,5 @@ export declare const LabelRepresentationProvider: StructureRepresentationProvide
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99
99
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fontVariant: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontVariant>;
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100
100
|
fontWeight: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontWeight>;
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101
101
|
alpha: PD.Numeric;
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|
102
|
-
quality: PD.Select<"
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102
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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103
103
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}, "label">;
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