molstar 2.3.3 → 2.3.8

package/lib/commonjs/cli/cifschema/util/cif-dic.js.map

@@ -1 +1 @@
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package/lib/commonjs/cli/cifschema/util/generate.js

@@ -9,10 +9,10 @@ exports.generate = void 0;
 var string_1 = require("../../../mol-util/string");
 var schema_1 = require("../../../mol-io/reader/cif/schema");
 function header(name, info, moldataImportPath) {
-    return "/**\n * Copyright (c) 2017-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.\n *\n * Code-generated '" + name + "' schema file. " + info + "\n *\n * @author molstar/ciftools package\n */\n\nimport { Database, Column } from '" + moldataImportPath + "/db';\n\nimport Schema = Column.Schema;";
+    return "/**\n * Copyright (c) 2017-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.\n *\n * Code-generated '".concat(name, "' schema file. ").concat(info, "\n *\n * @author molstar/ciftools package\n */\n\nimport { Database, Column } from '").concat(moldataImportPath, "/db';\n\nimport Schema = Column.Schema;");
 }
 function footer(name) {
-    return "\nexport type " + name + "_Schema = typeof " + name + "_Schema;\nexport interface " + name + "_Database extends Database<" + name + "_Schema> {};";
+    return "\nexport type ".concat(name, "_Schema = typeof ").concat(name, "_Schema;\nexport interface ").concat(name, "_Database extends Database<").concat(name, "_Schema> {};");
 }
 function getTypeShorthands(schema, fields) {
     var types = new Set();
@@ -64,31 +64,31 @@ function getTypeDef(c) {
         case 'float': return 'float';
         case 'coord': return 'coord';
         case 'enum':
-            return "Aliased<'" + c.values.map(function (v) { return v.replace(/'/g, '\\\''); }).join("' | '") + "'>(" + c.subType + ")";
+            return "Aliased<'".concat(c.values.map(function (v) { return v.replace(/'/g, '\\\''); }).join("' | '"), "'>(").concat(c.subType, ")");
         case 'matrix':
-            return "Matrix(" + c.rows + ", " + c.columns + ")";
+            return "Matrix(".concat(c.rows, ", ").concat(c.columns, ")");
         case 'vector':
-            return "Vector(" + c.length + ")";
+            return "Vector(".concat(c.length, ")");
         case 'list':
             if (c.subType === 'int') {
-                return "List('" + c.separator + "', x => parseInt(x, 10))";
+                return "List('".concat(c.separator, "', x => parseInt(x, 10))");
             }
             else if (c.subType === 'float' || c.subType === 'coord') {
-                return "List('" + c.separator + "', x => parseFloat(x))";
+                return "List('".concat(c.separator, "', x => parseFloat(x))");
             }
             else {
-                return "List('" + c.separator + "', x => x)";
+                return "List('".concat(c.separator, "', x => x)");
             }
     }
 }
 var reSafePropertyName = /^[a-zA-Z_$][0-9a-zA-Z_$]*$/;
-function safePropertyString(name) { return name.match(reSafePropertyName) ? name : "'" + name + "'"; }
+function safePropertyString(name) { return name.match(reSafePropertyName) ? name : "'".concat(name, "'"); }
 function doc(description, spacesCount) {
     var spaces = ' '.repeat(spacesCount);
     return [
-        spaces + "/**",
-        ("" + (0, string_1.indentString)(description, 1, spaces + " * ")).replace(/ +\n/g, '\n'),
-        spaces + " */"
+        "".concat(spaces, "/**"),
+        "".concat((0, string_1.indentString)(description, 1, "".concat(spaces, " * "))).replace(/ +\n/g, '\n'),
+        "".concat(spaces, " */")
     ].join('\n');
 }
 function generate(name, info, schema, fields, moldataImportPath, addAliases) {
@@ -99,23 +99,23 @@ function generate(name, info, schema, fields, moldataImportPath, addAliases) {
                 var schemaTable_1 = schema.tables[table];
                 Object.keys(fields[table]).forEach(function (column) {
                     if (!(column in schemaTable_1.columns)) {
-                        console.log("filter field '" + table + "." + column + "' not found in schema");
+                        console.log("filter field '".concat(table, ".").concat(column, "' not found in schema"));
                     }
                 });
             }
             else {
-                console.log("filter category '" + table + "' not found in schema");
+                console.log("filter category '".concat(table, "' not found in schema"));
             }
         });
     }
-    codeLines.push("export const " + name + "_Schema = {");
+    codeLines.push("export const ".concat(name, "_Schema = {"));
     Object.keys(schema.tables).forEach(function (table) {
         if (fields && !fields[table])
             return;
         var _a = schema.tables[table], description = _a.description, columns = _a.columns;
         if (description)
             codeLines.push(doc(description, 4));
-        codeLines.push("    " + safePropertyString(table) + ": {");
+        codeLines.push("    ".concat(safePropertyString(table), ": {"));
         Object.keys(columns).forEach(function (columnName) {
             if (fields && !fields[table][columnName])
                 return;
@@ -123,14 +123,14 @@ function generate(name, info, schema, fields, moldataImportPath, addAliases) {
             var typeDef = getTypeDef(c);
             if (c.description)
                 codeLines.push(doc(c.description, 8));
-            codeLines.push("        " + safePropertyString(columnName) + ": " + typeDef + ",");
+            codeLines.push("        ".concat(safePropertyString(columnName), ": ").concat(typeDef, ","));
         });
         codeLines.push('    },');
     });
     codeLines.push('};');
     if (addAliases) {
         codeLines.push('');
-        codeLines.push("export const " + name + "_Aliases = {");
+        codeLines.push("export const ".concat(name, "_Aliases = {"));
         Object.keys(schema.aliases).forEach(function (path) {
             var _a = path.split('.'), table = _a[0], columnName = _a[1];
             if (fields && !fields[table])
@@ -144,15 +144,15 @@ function generate(name, info, schema, fields, moldataImportPath, addAliases) {
             });
             if (filteredAliases.size === 0)
                 return;
-            codeLines.push("    " + safePropertyString(path) + ": [");
+            codeLines.push("    ".concat(safePropertyString(path), ": ["));
             filteredAliases.forEach(function (alias) {
-                codeLines.push("        '" + alias + "',");
+                codeLines.push("        '".concat(alias, "',"));
             });
             codeLines.push('    ],');
         });
         codeLines.push('};');
     }
-    return header(name, info, moldataImportPath) + "\n\n" + getTypeShorthands(schema, fields) + "\n\n" + codeLines.join('\n') + "\n" + footer(name);
+    return "".concat(header(name, info, moldataImportPath), "\n\n").concat(getTypeShorthands(schema, fields), "\n\n").concat(codeLines.join('\n'), "\n").concat(footer(name));
 }
 exports.generate = generate;
 //# sourceMappingURL=generate.js.map

package/lib/commonjs/cli/cifschema/util/generate.js.map

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+{"version":3,"file":"generate.js","sourceRoot":"","sources":["../../../../../src/cli/cifschema/util/generate.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;AAGH,mDAAwD;AACxD,4DAA8D;AAE9D,SAAS,MAAM,CAAC,IAAY,EAAE,IAAY,EAAE,iBAAyB;IACjE,OAAO,yIAGU,IAAI,4BAAkB,IAAI,iGAKX,iBAAiB,4CAEtB,CAAC;AAChC,CAAC;AAED,SAAS,MAAM,CAAC,IAAY;IACxB,OAAO,wBACG,IAAI,8BAAoB,IAAI,wCACvB,IAAI,wCAA8B,IAAI,iBAAc,CAAC;AACxE,CAAC;AAED,SAAS,iBAAiB,CAAC,MAAgB,EAAE,MAAe;IACxD,IAAM,KAAK,GAAG,IAAI,GAAG,EAAU,CAAC;IAChC,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,OAAO,CAAC,UAAA,KAAK;QACpC,IAAI,MAAM,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC;YAAE,OAAO;QAC7B,IAAA,OAAO,GAAK,MAAM,CAAC,MAAM,CAAC,KAAK,CAAC,QAAzB,CAA0B;QACzC,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,OAAO,CAAC,UAAA,UAAU;YACnC,IAAI,MAAM,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,UAAU,CAAC;gBAAE,OAAO;YACjD,KAAK,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,OAAO,CAAC,UAAU,CAAC,CAAC,IAAI,CAAC,CAAC;QAC7D,CAAC,CAAC,CAAC;IACP,CAAC,CAAC,CAAC;IACH,IAAM,UAAU,GAAa,EAAE,CAAC;IAChC,KAAK,CAAC,OAAO,CAAC,UAAA,IAAI;QACd,QAAQ,IAAI,EAAE;YACV,KAAK,KAAK;gBAAE,UAAU,CAAC,IAAI,CAAC,yBAAyB,CAAC,CAAC;gBAAC,MAAM;YAC9D,KAAK,KAAK;gBAAE,UAAU,CAAC,IAAI,CAAC,yBAAyB,CAAC,CAAC;gBAAC,MAAM;YAC9D,KAAK,OAAO;gBAAE,UAAU,CAAC,IAAI,CAAC,6BAA6B,CAAC,CAAC;gBAAC,MAAM;YACpE,KAAK,OAAO;gBAAE,UAAU,CAAC,IAAI,CAAC,6BAA6B,CAAC,CAAC;gBAAC,MAAM;YACpE,KAAK,MAAM;gBAAE,UAAU,CAAC,IAAI,CAAC,iCAAiC,CAAC,CAAC;gBAAC,MAAM;YACvE,KAAK,QAAQ;gBAAE,UAAU,CAAC,IAAI,CAAC,+BAA+B,CAAC,CAAC;gBAAC,MAAM;YACvE,KAAK,QAAQ;gBAAE,UAAU,CAAC,IAAI,CAAC,+BAA+B,CAAC,CAAC;gBAAC,MAAM;YACvE,KAAK,MAAM;gBAAE,UAAU,CAAC,IAAI,CAAC,2BAA2B,CAAC,CAAC;gBAAC,MAAM;SACpE;IACL,CAAC,CAAC,CAAC;IACH,OAAO,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AACjC,CAAC;AAED,SAAS,UAAU,CAAC,CAAS;IACzB,QAAQ,CAAC,CAAC,IAAI,EAAE;QACZ,KAAK,KAAK,CAAC,CAAC,OAAO,KAAK,CAAC;QACzB,KAAK,KAAK,CAAC,CAAC,OAAO,KAAK,CAAC;QACzB,KAAK,OAAO,CAAC,CAAC,OAAO,OAAO,CAAC;QAC7B,KAAK,OAAO,CAAC,CAAC,OAAO,OAAO,CAAC;QAC7B,KAAK,MAAM;YACP,OAAO,mBAAY,CAAC,CAAC,MAAM,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,OAAO,CAAC,IAAI,EAAE,MAAM,CAAC,EAAvB,CAAuB,CAAC,CAAC,IAAI,CAAC,OAAO,CAAC,gBAAM,CAAC,CAAC,OAAO,MAAG,CAAC;QAClG,KAAK,QAAQ;YACT,OAAO,iBAAU,CAAC,CAAC,IAAI,eAAK,CAAC,CAAC,OAAO,MAAG,CAAC;QAC7C,KAAK,QAAQ;YACT,OAAO,iBAAU,CAAC,CAAC,MAAM,MAAG,CAAC;QACjC,KAAK,MAAM;YACP,IAAI,CAAC,CAAC,OAAO,KAAK,KAAK,EAAE;gBACrB,OAAO,gBAAS,CAAC,CAAC,SAAS,6BAA0B,CAAC;aACzD;iBAAM,IAAI,CAAC,CAAC,OAAO,KAAK,OAAO,IAAI,CAAC,CAAC,OAAO,KAAK,OAAO,EAAE;gBACvD,OAAO,gBAAS,CAAC,CAAC,SAAS,2BAAwB,CAAC;aACvD;iBAAM;gBACH,OAAO,gBAAS,CAAC,CAAC,SAAS,eAAY,CAAC;aAC3C;KACR;AACL,CAAC;AAED,IAAM,kBAAkB,GAAG,4BAA4B,CAAC;AACxD,SAAS,kBAAkB,CAAC,IAAY,IAAI,OAAO,IAAI,CAAC,KAAK,CAAC,kBAAkB,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,WAAI,IAAI,MAAG,CAAC,CAAC,CAAC;AAEzG,SAAS,GAAG,CAAC,WAAmB,EAAE,WAAmB;IACjD,IAAM,MAAM,GAAG,GAAG,CAAC,MAAM,CAAC,WAAW,CAAC,CAAC;IACvC,OAAO;QACH,UAAG,MAAM,QAAK;QACd,UAAG,IAAA,qBAAY,EAAC,WAAW,EAAE,CAAC,EAAE,UAAG,MAAM,QAAK,CAAC,CAAE,CAAC,OAAO,CAAC,OAAO,EAAE,IAAI,CAAC;QACxE,UAAG,MAAM,QAAK;KACjB,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AACjB,CAAC;AAED,SAAgB,QAAQ,CAAC,IAAY,EAAE,IAAY,EAAE,MAAgB,EAAE,MAA0B,EAAE,iBAAyB,EAAE,UAAmB;IAC7I,IAAM,SAAS,GAAa,EAAE,CAAC;IAE/B,IAAI,MAAM,EAAE;QACR,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,OAAO,CAAC,UAAA,KAAK;YAC7B,IAAI,KAAK,IAAI,MAAM,CAAC,MAAM,EAAE;gBACxB,IAAM,aAAW,GAAG,MAAM,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;gBACzC,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC,UAAA,MAAM;oBACrC,IAAI,CAAC,CAAC,MAAM,IAAI,aAAW,CAAC,OAAO,CAAC,EAAE;wBAClC,OAAO,CAAC,GAAG,CAAC,wBAAiB,KAAK,cAAI,MAAM,0BAAuB,CAAC,CAAC;qBACxE;gBACL,CAAC,CAAC,CAAC;aACN;iBAAM;gBACH,OAAO,CAAC,GAAG,CAAC,2BAAoB,KAAK,0BAAuB,CAAC,CAAC;aACjE;QACL,CAAC,CAAC,CAAC;KACN;IAED,SAAS,CAAC,IAAI,CAAC,uBAAgB,IAAI,gBAAa,CAAC,CAAC;IAClD,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,OAAO,CAAC,UAAA,KAAK;QACpC,IAAI,MAAM,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC;YAAE,OAAO;QAC/B,IAAA,KAA2B,MAAM,CAAC,MAAM,CAAC,KAAK,CAAC,EAA7C,WAAW,iBAAA,EAAE,OAAO,aAAyB,CAAC;QACtD,IAAI,WAAW;YAAE,SAAS,CAAC,IAAI,CAAC,GAAG,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC,CAAC;QACrD,SAAS,CAAC,IAAI,CAAC,cAAO,kBAAkB,CAAC,KAAK,CAAC,QAAK,CAAC,CAAC;QACtD,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC,OAAO,CAAC,UAAA,UAAU;YACnC,IAAI,MAAM,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,UAAU,CAAC;gBAAE,OAAO;YACjD,IAAM,CAAC,GAAG,OAAO,CAAC,UAAU,CAAC,CAAC;YAC9B,IAAM,OAAO,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;YAC9B,IAAI,CAAC,CAAC,WAAW;gBAAE,SAAS,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC,CAAC;YACzD,SAAS,CAAC,IAAI,CAAC,kBAAW,kBAAkB,CAAC,UAAU,CAAC,eAAK,OAAO,MAAG,CAAC,CAAC;QAC7E,CAAC,CAAC,CAAC;QACH,SAAS,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC;IAC7B,CAAC,CAAC,CAAC;IACH,SAAS,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IAErB,IAAI,UAAU,EAAE;QACZ,SAAS,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QACnB,SAAS,CAAC,IAAI,CAAC,uBAAgB,IAAI,iBAAc,CAAC,CAAC;QACnD,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC,OAAO,CAAC,UAAA,IAAI;YAC9B,IAAA,KAAsB,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,EAApC,KAAK,QAAA,EAAE,UAAU,QAAmB,CAAC;YAC5C,IAAI,MAAM,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC;gBAAE,OAAO;YACrC,IAAI,MAAM,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,UAAU,CAAC;gBAAE,OAAO;YAEjD,IAAM,eAAe,GAAG,IAAI,GAAG,EAAU,CAAC;YAC1C,MAAM,CAAC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package/lib/commonjs/cli/cifschema/util/schema.js

@@ -41,7 +41,7 @@ function mergeFilters() {
     filters.forEach(function (filter) {
         Object.keys(filter).forEach(function (category) {
             Object.keys(filter[category]).forEach(function (field) {
-                var key = category + "." + field;
+                var key = "".concat(category, ".").concat(field);
                 var value = fields.get(key) || 0;
                 fields.set(key, value + 1);
             });

package/lib/commonjs/cli/cifschema/util/schema.js.map

@@ -1 +1 @@
-{"version":3,"file":"schema.js","sourceRoot":"","sources":["../../../../../src/cli/cifschema/util/schema.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;AAgBH,SAAgB,MAAM,CAAC,WAAmB,IAAY,OAAO,EAAE,IAAI,EAAE,KAAK,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAA5F,wBAA4F;AAG5F,SAAgB,MAAM,CAAC,WAAmB,IAAY,OAAO,EAAE,IAAI,EAAE,KAAK,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAA5F,wBAA4F;AAG5F,SAAgB,QAAQ,CAAC,WAAmB,IAAc,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAAlG,4BAAkG;AAGlG,SAAgB,QAAQ,CAAC,WAAmB,IAAc,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAAlG,4BAAkG;AAGlG,SAAgB,OAAO,CAAC,MAAgB,EAAE,OAAsB,EAAE,WAAmB;IACjF,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,WAAW,aAAA,EAAE,MAAM,QAAA,EAAE,OAAO,SAAA,EAAE,CAAC;AAC1D,CAAC;AAFD,0BAEC;AAGD,SAAgB,SAAS,CAAC,MAAc,EAAE,WAAmB;IACzD,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,WAAW,aAAA,EAAE,MAAM,QAAA,EAAE,CAAC;AACnD,CAAC;AAFD,8BAEC;AAGD,SAAgB,SAAS,CAAC,OAAe,EAAE,IAAY,EAAE,WAAmB;IACxE,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,WAAW,aAAA,EAAE,OAAO,SAAA,EAAE,IAAI,MAAA,EAAE,CAAC;AAC1D,CAAC;AAFD,8BAEC;AAGD,SAAgB,OAAO,CAAC,OAA0C,EAAE,SAAiB,EAAE,WAAmB;IACtG,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,WAAW,aAAA,EAAE,SAAS,WAAA,EAAE,OAAO,SAAA,EAAE,CAAC;AAC7D,CAAC;AAFD,0BAEC;AAID,SAAgB,YAAY;IAAC,iBAAoB;SAApB,UAAoB,EAApB,qBAAoB,EAApB,IAAoB;QAApB,4BAAoB;;IAC7C,IAAM,CAAC,GAAG,OAAO,CAAC,MAAM,CAAC;IACzB,IAAM,YAAY,GAAW,EAAE,CAAC;IAChC,IAAM,MAAM,GAAwB,IAAI,GAAG,EAAE,CAAC;IAC9C,OAAO,CAAC,OAAO,CAAC,UAAA,MAAM;QAClB,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,OAAO,CAAC,UAAA,QAAQ;YAChC,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC,CAAC,OAAO,CAAC,UAAA,KAAK;gBACvC,IAAM,GAAG,GAAM,QAAQ,SAAI,KAAO,CAAC;gBACnC,IAAM,KAAK,GAAG,MAAM,CAAC,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;gBACnC,MAAM,CAAC,GAAG,CAAC,GAAG,EAAE,KAAK,GAAG,CAAC,CAAC,CAAC;YAC/B,CAAC,CAAC,CAAC;QACP,CAAC,CAAC,CAAC;IACP,CAAC,CAAC,CAAC;IACH,MAAM,CAAC,OAAO,CAAC,UAAC,CAAC,EAAE,CAAC;QAChB,IAAI,CAAC,KAAK,CAAC;YAAE,OAAO;QACd,IAAA,KAA4B,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,EAAvC,YAAY,QAAA,EAAE,SAAS,QAAgB,CAAC;QAC/C,IAAI,YAAY,IAAI,YAAY,EAAE;YAC9B,YAAY,CAAC,YAAY,CAAC,CAAC,SAAS,CAAC,GAAG,IAAI,CAAC;SAChD;aAAM;YACH,YAAY,CAAC,YAAY,CAAC,GAAG,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC;SACpD;IACL,CAAC,CAAC,CAAC;IACH,OAAO,YAAY,CAAC;AACxB,CAAC;AAvBD,oCAuBC"}
+{"version":3,"file":"schema.js","sourceRoot":"","sources":["../../../../../src/cli/cifschema/util/schema.ts"],"names":[],"mappings":";AAAA;;;;GAIG;;;AAgBH,SAAgB,MAAM,CAAC,WAAmB,IAAY,OAAO,EAAE,IAAI,EAAE,KAAK,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAA5F,wBAA4F;AAG5F,SAAgB,MAAM,CAAC,WAAmB,IAAY,OAAO,EAAE,IAAI,EAAE,KAAK,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAA5F,wBAA4F;AAG5F,SAAgB,QAAQ,CAAC,WAAmB,IAAc,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAAlG,4BAAkG;AAGlG,SAAgB,QAAQ,CAAC,WAAmB,IAAc,OAAO,EAAE,IAAI,EAAE,OAAO,EAAE,WAAW,aAAA,EAAE,CAAC,CAAC,CAAC;AAAlG,4BAAkG;AAGlG,SAAgB,OAAO,CAAC,MAAgB,EAAE,OAAsB,EAAE,WAAmB;IACjF,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,WAAW,aAAA,EAAE,MAAM,QAAA,EAAE,OAAO,SAAA,EAAE,CAAC;AAC1D,CAAC;AAFD,0BAEC;AAGD,SAAgB,SAAS,CAAC,MAAc,EAAE,WAAmB;IACzD,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,WAAW,aAAA,EAAE,MAAM,QAAA,EAAE,CAAC;AACnD,CAAC;AAFD,8BAEC;AAGD,SAAgB,SAAS,CAAC,OAAe,EAAE,IAAY,EAAE,WAAmB;IACxE,OAAO,EAAE,IAAI,EAAE,QAAQ,EAAE,WAAW,aAAA,EAAE,OAAO,SAAA,EAAE,IAAI,MAAA,EAAE,CAAC;AAC1D,CAAC;AAFD,8BAEC;AAGD,SAAgB,OAAO,CAAC,OAA0C,EAAE,SAAiB,EAAE,WAAmB;IACtG,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,WAAW,aAAA,EAAE,SAAS,WAAA,EAAE,OAAO,SAAA,EAAE,CAAC;AAC7D,CAAC;AAFD,0BAEC;AAID,SAAgB,YAAY;IAAC,iBAAoB;SAApB,UAAoB,EAApB,qBAAoB,EAApB,IAAoB;QAApB,4BAAoB;;IAC7C,IAAM,CAAC,GAAG,OAAO,CAAC,MAAM,CAAC;IACzB,IAAM,YAAY,GAAW,EAAE,CAAC;IAChC,IAAM,MAAM,GAAwB,IAAI,GAAG,EAAE,CAAC;IAC9C,OAAO,CAAC,OAAO,CAAC,UAAA,MAAM;QAClB,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,OAAO,CAAC,UAAA,QAAQ;YAChC,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC,CAAC,OAAO,CAAC,UAAA,KAAK;gBACvC,IAAM,GAAG,GAAG,UAAG,QAAQ,cAAI,KAAK,CAAE,CAAC;gBACnC,IAAM,KAAK,GAAG,MAAM,CAAC,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;gBACnC,MAAM,CAAC,GAAG,CAAC,GAAG,EAAE,KAAK,GAAG,CAAC,CAAC,CAAC;YAC/B,CAAC,CAAC,CAAC;QACP,CAAC,CAAC,CAAC;IACP,CAAC,CAAC,CAAC;IACH,MAAM,CAAC,OAAO,CAAC,UAAC,CAAC,EAAE,CAAC;QAChB,IAAI,CAAC,KAAK,CAAC;YAAE,OAAO;QACd,IAAA,KAA4B,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,EAAvC,YAAY,QAAA,EAAE,SAAS,QAAgB,CAAC;QAC/C,IAAI,YAAY,IAAI,YAAY,EAAE;YAC9B,YAAY,CAAC,YAAY,CAAC,CAAC,SAAS,CAAC,GAAG,IAAI,CAAC;SAChD;aAAM;YACH,YAAY,CAAC,YAAY,CAAC,GAAG,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC;SACpD;IACL,CAAC,CAAC,CAAC;IACH,OAAO,YAAY,CAAC;AACxB,CAAC;AAvBD,oCAuBC"}

package/lib/commonjs/cli/lipid-params/index.js

@@ -23,7 +23,7 @@ function ensureAvailable(path, url) {
                 case 0:
                     if (!(FORCE_DOWNLOAD || !fs.existsSync(path))) return [3 /*break*/, 3];
                     name_1 = url.substr(url.lastIndexOf('/') + 1);
-                    console.log("downloading " + name_1 + "...");
+                    console.log("downloading ".concat(name_1, "..."));
                     return [4 /*yield*/, (0, node_fetch_1.default)(url)];
                 case 1:
                     data = _d.sent();
@@ -35,7 +35,7 @@ function ensureAvailable(path, url) {
                     return [4 /*yield*/, data.text()];
                 case 2:
                     _b.apply(_a, _c.concat([_d.sent()]));
-                    console.log("done downloading " + name_1);
+                    console.log("done downloading ".concat(name_1));
                     _d.label = 3;
                 case 3: return [2 /*return*/];
             }
@@ -74,7 +74,7 @@ function run(out) {
                     }
                     lipidNames = JSON.stringify(lipids.array);
                     if (out) {
-                        output = "/**\n * Copyright (c) 2020 mol* contributors, licensed under MIT, See LICENSE file for more info.\n *\n * Code-generated lipid params file. Names extracted from Martini FF lipids itp.\n *\n * @author molstar/lipid-params cli\n */\n\nexport const LipidNames = new Set(" + lipidNames.replace(/"/g, "'").replace(/,/g, ', ') + ");\n";
+                        output = "/**\n * Copyright (c) 2020 mol* contributors, licensed under MIT, See LICENSE file for more info.\n *\n * Code-generated lipid params file. Names extracted from Martini FF lipids itp.\n *\n * @author molstar/lipid-params cli\n */\n\nexport const LipidNames = new Set(".concat(lipidNames.replace(/"/g, "'").replace(/,/g, ', '), ");\n");
                         fs.writeFileSync(out, output);
                     }
                     else {

package/lib/commonjs/cli/lipid-params/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../src/cli/lipid-params/index.ts"],"names":[],"mappings":";;AACA;;;;GAIG;;;AAEH,8DAAqC;AACrC,kDAAyB;AACzB,sDAA6B;AAC7B,uEAA+B;AAC/B,kDAAqD;AAErD,IAAM,UAAU,GAAG,IAAI,CAAC,OAAO,CAAC,SAAS,EAAE,2BAA2B,CAAC,CAAC;AAExE,IAAM,mBAAmB,GAAG,IAAI,CAAC,OAAO,CAAC,UAAU,EAAE,oBAAoB,CAAC,CAAC;AAC3E,IAAM,kBAAkB,GAAG,iGAAiG,CAAC;AAE7H,SAAe,eAAe,CAAC,IAAY,EAAE,GAAW;;;;;;yBAChD,CAAA,cAAc,IAAI,CAAC,EAAE,CAAC,UAAU,CAAC,IAAI,CAAC,CAAA,EAAtC,wBAAsC;oBAChC,SAAO,GAAG,CAAC,MAAM,CAAC,GAAG,CAAC,WAAW,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,CAAC;oBAClD,OAAO,CAAC,GAAG,CAAC,iBAAe,MAAI,QAAK,CAAC,CAAC;oBACzB,qBAAM,IAAA,oBAAK,EAAC,GAAG,CAAC,EAAA;;oBAAvB,IAAI,GAAG,SAAgB;oBAC7B,IAAI,CAAC,EAAE,CAAC,UAAU,CAAC,UAAU,CAAC,EAAE;wBAC5B,EAAE,CAAC,SAAS,CAAC,UAAU,CAAC,CAAC;qBAC5B;oBACD,KAAA,CAAA,KAAA,EAAE,CAAA,CAAC,aAAa,CAAA;0BAAC,IAAI;oBAAE,qBAAM,IAAI,CAAC,IAAI,EAAE,EAAA;;oBAAxC,wBAAuB,SAAiB,GAAC,CAAC;oBAC1C,OAAO,CAAC,GAAG,CAAC,sBAAoB,MAAM,CAAC,CAAC;;;;;;CAE/C;AAED,SAAe,qBAAqB;;;oBAAK,qBAAM,eAAe,CAAC,mBAAmB,EAAE,kBAAkB,CAAC,EAAA;;gBAA9D,SAA8D,CAAC;;;;CAAE;AAE1G,IAAM,WAAW,GAAG,CAAC,MAAM,CAAC,CAAC;AAE7B,SAAe,GAAG,CAAC,GAAW;;;;;wBAC1B,qBAAM,qBAAqB,EAAE,EAAA;;oBAA7B,SAA6B,CAAC;oBACxB,YAAY,GAAG,EAAE,CAAC,YAAY,CAAC,mBAAmB,EAAE,MAAM,CAAC,CAAC;oBAE5D,MAAM,GAAG,qBAAW,CAAC,MAAM,EAAU,CAAC;oBACtC,OAAO,GAAG,6DAA6D,CAAC;oBAG9E,OAAO,CAAC,CAAC,GAAG,OAAO,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC,KAAK,IAAI,EAAE;wBACxC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,CAAC;wBACjD,qBAAW,CAAC,GAAG,CAAC,MAAM,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;qBACjC;oBAED,WAA2B,EAAX,2BAAW,EAAX,yBAAW,EAAX,IAAW,EAAE;wBAAlB,CAAC;wBACR,qBAAW,CAAC,GAAG,CAAC,MAAM,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;qBACjC;oBAEK,UAAU,GAAG,IAAI,CAAC,SAAS,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;oBAEhD,IAAI,GAAG,EAAE;wBACC,MAAM,GAAG,gRAQa,UAAU,CAAC,OAAO,CAAC,IAAI,EAAE,GAAG,CAAC,CAAC,OAAO,CAAC,IAAI,EAAE,IAAI,CAAC,SACpF,CAAC;wBACM,EAAE,CAAC,aAAa,CAAC,GAAG,EAAE,MAAM,CAAC,CAAC;qBACjC;yBAAM;wBACH,OAAO,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;qBAC3B;;;;;CACJ;AAED,IAAM,MAAM,GAAG,IAAI,QAAQ,CAAC,cAAc,CAAC;IACvC,QAAQ,EAAE,IAAI;IACd,WAAW,EAAE,+CAA+C;CAC/D,CAAC,CAAC;AACH,MAAM,CAAC,YAAY,CAAC,OAAO,EAAE,IAAI,EAAE;IAC/B,IAAI,EAAE,oEAAoE;CAC7E,CAAC,CAAC;AACH,MAAM,CAAC,YAAY,CAAC,iBAAiB,EAAE,IAAI,EAAE;IACzC,MAAM,EAAE,YAAY;IACpB,IAAI,EAAE,sCAAsC;CAC/C,CAAC,CAAC;AAKH,IAAM,IAAI,GAAS,MAAM,CAAC,UAAU,EAAE,CAAC;AAEvC,IAAM,cAAc,GAAG,IAAI,CAAC,aAAa,CAAC;AAE1C,GAAG,CAAC,IAAI,CAAC,GAAG,IAAI,EAAE,CAAC,CAAC,KAAK,CAAC,UAAA,CAAC;IACvB,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;AACrB,CAAC,CAAC,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../src/cli/lipid-params/index.ts"],"names":[],"mappings":";;AACA;;;;GAIG;;;AAEH,8DAAqC;AACrC,kDAAyB;AACzB,sDAA6B;AAC7B,uEAA+B;AAC/B,kDAAqD;AAErD,IAAM,UAAU,GAAG,IAAI,CAAC,OAAO,CAAC,SAAS,EAAE,2BAA2B,CAAC,CAAC;AAExE,IAAM,mBAAmB,GAAG,IAAI,CAAC,OAAO,CAAC,UAAU,EAAE,oBAAoB,CAAC,CAAC;AAC3E,IAAM,kBAAkB,GAAG,iGAAiG,CAAC;AAE7H,SAAe,eAAe,CAAC,IAAY,EAAE,GAAW;;;;;;yBAChD,CAAA,cAAc,IAAI,CAAC,EAAE,CAAC,UAAU,CAAC,IAAI,CAAC,CAAA,EAAtC,wBAAsC;oBAChC,SAAO,GAAG,CAAC,MAAM,CAAC,GAAG,CAAC,WAAW,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,CAAC;oBAClD,OAAO,CAAC,GAAG,CAAC,sBAAe,MAAI,QAAK,CAAC,CAAC;oBACzB,qBAAM,IAAA,oBAAK,EAAC,GAAG,CAAC,EAAA;;oBAAvB,IAAI,GAAG,SAAgB;oBAC7B,IAAI,CAAC,EAAE,CAAC,UAAU,CAAC,UAAU,CAAC,EAAE;wBAC5B,EAAE,CAAC,SAAS,CAAC,UAAU,CAAC,CAAC;qBAC5B;oBACD,KAAA,CAAA,KAAA,EAAE,CAAA,CAAC,aAAa,CAAA;0BAAC,IAAI;oBAAE,qBAAM,IAAI,CAAC,IAAI,EAAE,EAAA;;oBAAxC,wBAAuB,SAAiB,GAAC,CAAC;oBAC1C,OAAO,CAAC,GAAG,CAAC,2BAAoB,MAAI,CAAE,CAAC,CAAC;;;;;;CAE/C;AAED,SAAe,qBAAqB;;;oBAAK,qBAAM,eAAe,CAAC,mBAAmB,EAAE,kBAAkB,CAAC,EAAA;;gBAA9D,SAA8D,CAAC;;;;CAAE;AAE1G,IAAM,WAAW,GAAG,CAAC,MAAM,CAAC,CAAC;AAE7B,SAAe,GAAG,CAAC,GAAW;;;;;wBAC1B,qBAAM,qBAAqB,EAAE,EAAA;;oBAA7B,SAA6B,CAAC;oBACxB,YAAY,GAAG,EAAE,CAAC,YAAY,CAAC,mBAAmB,EAAE,MAAM,CAAC,CAAC;oBAE5D,MAAM,GAAG,qBAAW,CAAC,MAAM,EAAU,CAAC;oBACtC,OAAO,GAAG,6DAA6D,CAAC;oBAG9E,OAAO,CAAC,CAAC,GAAG,OAAO,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC,KAAK,IAAI,EAAE;wBACxC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,CAAC;wBACjD,qBAAW,CAAC,GAAG,CAAC,MAAM,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;qBACjC;oBAED,WAA2B,EAAX,2BAAW,EAAX,yBAAW,EAAX,IAAW,EAAE;wBAAlB,CAAC;wBACR,qBAAW,CAAC,GAAG,CAAC,MAAM,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;qBACjC;oBAEK,UAAU,GAAG,IAAI,CAAC,SAAS,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;oBAEhD,IAAI,GAAG,EAAE;wBACC,MAAM,GAAG,qRAQa,UAAU,CAAC,OAAO,CAAC,IAAI,EAAE,GAAG,CAAC,CAAC,OAAO,CAAC,IAAI,EAAE,IAAI,CAAC,SACpF,CAAC;wBACM,EAAE,CAAC,aAAa,CAAC,GAAG,EAAE,MAAM,CAAC,CAAC;qBACjC;yBAAM;wBACH,OAAO,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;qBAC3B;;;;;CACJ;AAED,IAAM,MAAM,GAAG,IAAI,QAAQ,CAAC,cAAc,CAAC;IACvC,QAAQ,EAAE,IAAI;IACd,WAAW,EAAE,+CAA+C;CAC/D,CAAC,CAAC;AACH,MAAM,CAAC,YAAY,CAAC,OAAO,EAAE,IAAI,EAAE;IAC/B,IAAI,EAAE,oEAAoE;CAC7E,CAAC,CAAC;AACH,MAAM,CAAC,YAAY,CAAC,iBAAiB,EAAE,IAAI,EAAE;IACzC,MAAM,EAAE,YAAY;IACpB,IAAI,EAAE,sCAAsC;CAC/C,CAAC,CAAC;AAKH,IAAM,IAAI,GAAS,MAAM,CAAC,UAAU,EAAE,CAAC;AAEvC,IAAM,cAAc,GAAG,IAAI,CAAC,aAAa,CAAC;AAE1C,GAAG,CAAC,IAAI,CAAC,GAAG,IAAI,EAAE,CAAC,CAAC,KAAK,CAAC,UAAA,CAAC;IACvB,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;AACrB,CAAC,CAAC,CAAC"}

package/lib/commonjs/cli/state-docs/index.js

@@ -27,10 +27,10 @@ function typeToString(o) {
     return o.map(function (o) { return o.name; }).join(' | ');
 }
 function writeTransformer(t) {
-    mol_util_1.StringBuilder.write(builder, "## <a name=\"" + t.id.replace('.', '-') + "\"></a>" + t.id + " :: " + typeToString(t.definition.from) + " -> " + typeToString(t.definition.to));
+    mol_util_1.StringBuilder.write(builder, "## <a name=\"".concat(t.id.replace('.', '-'), "\"></a>").concat(t.id, " :: ").concat(typeToString(t.definition.from), " -> ").concat(typeToString(t.definition.to)));
     mol_util_1.StringBuilder.newline(builder);
     if (t.definition.display.description) {
-        mol_util_1.StringBuilder.write(builder, "*" + t.definition.display.description + "*");
+        mol_util_1.StringBuilder.write(builder, "*".concat(t.definition.display.description, "*"));
         mol_util_1.StringBuilder.newline(builder);
     }
     mol_util_1.StringBuilder.newline(builder);
@@ -42,7 +42,7 @@ function writeTransformer(t) {
         mol_util_1.StringBuilder.newline(builder);
         mol_util_1.StringBuilder.write(builder, "### Default Parameters");
         mol_util_1.StringBuilder.newline(builder);
-        mol_util_1.StringBuilder.write(builder, "```js\n" + JSON.stringify(param_definition_1.ParamDefinition.getDefaultValues(params), null, 2) + "\n```");
+        mol_util_1.StringBuilder.write(builder, "```js\n".concat(JSON.stringify(param_definition_1.ParamDefinition.getDefaultValues(params), null, 2), "\n```"));
         mol_util_1.StringBuilder.newline(builder);
     }
     mol_util_1.StringBuilder.write(builder, '----------------------------');
@@ -53,7 +53,7 @@ mol_util_1.StringBuilder.write(builder, '# Mol* Plugin State Transformer Referen
 mol_util_1.StringBuilder.newline(builder);
 mol_util_1.StringBuilder.newline(builder);
 transformers.forEach(function (t) {
-    mol_util_1.StringBuilder.write(builder, "* [" + t.id + "](#" + t.id.replace('.', '-') + ")");
+    mol_util_1.StringBuilder.write(builder, "* [".concat(t.id, "](#").concat(t.id.replace('.', '-'), ")"));
     mol_util_1.StringBuilder.newline(builder);
 });
 mol_util_1.StringBuilder.newline(builder);

package/lib/commonjs/cli/state-docs/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../src/cli/state-docs/index.ts"],"names":[],"mappings":";;AACA;;;;GAIG;;;AAEH,gFAAuD;AACvD,6CAAgE;AAChE,2CAA+C;AAC/C,kDAAyB;AACzB,uCAAwC;AACxC,oDAAyD;AACzD,oEAAkE;AAElE,sCAAsC;AACtC,CAAC,CAAC,eAAe,CAAC,IAAI,CAAC,QAAQ,CAAC,EAAE,CAAC;AAEnC,uBAAuB;AACvB,IAAM,GAAG,GAAG,IAAI,uBAAa,CAAC;IAC1B,SAAS,EAAE,EAAE;CAChB,CAAC,CAAC;AAEH,IAAM,OAAO,GAAG,wBAAa,CAAC,MAAM,EAAE,CAAC;AAEvC,SAAS,YAAY,CAAC,CAAqB;IACvC,IAAI,CAAC,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO,IAAI,CAAC;IAChC,OAAO,CAAC,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,IAAI,EAAN,CAAM,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;AAC1C,CAAC;AAED,SAAS,gBAAgB,CAAC,CAAmB;IACzC,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,uBAAe,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,GAAG,EAAE,GAAG,CAAC,oBAAS,CAAC,CAAC,EAAE,iBAAO,YAAY,CAAC,CAAC,CAAC,UAAU,CAAC,IAAI,CAAC,iBAAO,YAAY,CAAC,CAAC,CAAC,UAAU,CAAC,EAAE,CAAC,CAAE,CAAC,CAAC;IAC7J,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;IAC/B,IAAI,CAAC,CAAC,UAAU,CAAC,OAAO,CAAC,WAAW,EAAE;QAClC,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,WAAI,CAAC,CAAC,UAAU,CAAC,OAAO,CAAC,WAAW,MAAG,CAAC,CAAC;QACtE,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;KAClC;IACD,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;IAC/B,IAAI,CAAC,CAAC,UAAU,CAAC,MAAM,EAAE;QACrB,IAAM,MAAM,GAAG,CAAC,CAAC,UAAU,CAAC,MAAM,CAAC,KAAK,CAAC,EAAE,GAAG,CAAC,CAAC;QAChD,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,gBAAgB,CAAC,CAAC;QAC/C,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;QAC/B,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,IAAA,qBAAU,EAAC,MAAM,CAAC,CAAC,CAAC;QACjD,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;QAE/B,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,wBAAwB,CAAC,CAAC;QACvD,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;QAC/B,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,iBAAa,IAAI,CAAC,SAAS,CAAC,kCAAe,CAAC,gBAAgB,CAAC,MAAM,CAAC,EAAE,IAAI,EAAE,CAAC,CAAC,UAAU,CAAC,CAAC;QACvH,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;KAClC;IACD,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,8BAA8B,CAAC,CAAC;IAC7D,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AACnC,CAAC;AAED,IAAM,YAAY,GAAG,4BAAgB,CAAC,MAAM,EAAE,CAAC;AAE/C,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,2CAA2C,CAAC,CAAC;AAC1E,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AAC/B,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AAC/B,YAAY,CAAC,OAAO,CAAC,UAAA,CAAC;IAClB,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,aAAM,CAAC,CAAC,EAAE,gBAAM,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,GAAG,EAAE,GAAG,CAAC,MAAG,CAAC,CAAC;IACxE,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AACnC,CAAC,CAAC,CAAC;AACH,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AAC/B,wBAAa,CAAC,KAAK,CAAC,OAAO,EAAE,8BAA8B,CAAC,CAAC;AAC7D,wBAAa,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;AAC/B,YAAY,CAAC,OAAO,CAAC,UAAA,CAAC,IAAI,OAAA,gBAAgB,CAAC,CAAC,CAAC,EAAnB,CAAmB,CAAC,CAAC;AAE/C,EAAE,CAAC,aAAa,CAAC,0BAA0B,EAAE,wBAAa,CAAC,SAAS,CAAC,OAAO,CAAC,CAAC,CAAC"}

package/lib/commonjs/cli/state-docs/pd-to-md.js

@@ -18,7 +18,7 @@ function paramInfo(param, offset) {
         case 'number': return 'Numeric value';
         case 'converted': return paramInfo(param.converted, offset);
         case 'conditioned': return getParams(param.conditionParams, offset);
-        case 'multi-select': return "Array of " + oToS(param.options);
+        case 'multi-select': return "Array of ".concat(oToS(param.options));
         case 'color': return 'Color as 0xrrggbb';
         case 'color-list': return "A list of colors as 0xrrggbb";
         case 'vec3': return "3D vector [x, y, z]";
@@ -26,25 +26,25 @@ function paramInfo(param, offset) {
         case 'url': return "URL couple with unique identifier";
         case 'file': return "JavaScript File Handle";
         case 'file-list': return "JavaScript FileList Handle";
-        case 'select': return "One of " + oToS(param.options);
+        case 'select': return "One of ".concat(oToS(param.options));
         case 'value-ref': return "Reference to a runtime defined value.";
         case 'data-ref': return "Reference to a computed data value.";
         case 'text': return 'String';
         case 'interval': return "Interval [min, max]";
-        case 'group': return "Object with:\n" + getParams(param.params, offset + 2);
-        case 'mapped': return "Object { name: string, params: object } where name+params are:\n" + getMapped(param, offset + 2);
+        case 'group': return "Object with:\n".concat(getParams(param.params, offset + 2));
+        case 'mapped': return "Object { name: string, params: object } where name+params are:\n".concat(getMapped(param, offset + 2));
         case 'line-graph': return "A list of 2d vectors [xi, yi][]";
-        case 'object-list': return "Array of\n" + paramInfo(param_definition_1.ParamDefinition.Group(param.element), offset + 2);
+        case 'object-list': return "Array of\n".concat(paramInfo(param_definition_1.ParamDefinition.Group(param.element), offset + 2));
         // TODO: support more languages
         case 'script': return "An expression in the specified language { language: 'mol-script', expressiong: string }";
         default:
             var _ = param;
-            console.warn(_ + " has no associated UI component");
+            console.warn("".concat(_, " has no associated UI component"));
             return '';
     }
 }
 function oToS(options) {
-    return options.map(function (o) { return "'" + o[0] + "'"; }).join(', ');
+    return options.map(function (o) { return "'".concat(o[0], "'"); }).join(', ');
 }
 function offsetS(n) {
     return new Array(n + 1).join(' ') + '- ';
@@ -54,7 +54,7 @@ function getMapped(param, offset) {
     for (var _i = 0, _a = param.select.options; _i < _a.length; _i++) {
         var n = _a[_i][0];
         ret += offsetS(offset);
-        ret += "**" + n + "**:\n";
+        ret += "**".concat(n, "**:\n");
         ret += paramInfo(param.map(n), offset + 2);
         ret += '\n';
     }
@@ -66,12 +66,12 @@ function getParams(params, offset) {
         var k = _a[_i];
         var param = params[k];
         ret += offsetS(offset);
-        ret += "**" + k + "**" + (param.isOptional ? '?:' : ':') + " " + paramInfo(param, offset);
+        ret += "**".concat(k, "**").concat(param.isOptional ? '?:' : ':', " ").concat(paramInfo(param, offset));
         // if (param.defaultValue) {
         //     ret += ` = ${JSON.stringify(param.defaultValue)}`;
         // }
         if (param.description) {
-            ret += " *(" + param.description + ")*";
+            ret += " *(".concat(param.description, ")*");
         }
         ret += '\n';
     }

package/lib/commonjs/cli/state-docs/pd-to-md.js.map

@@ -1 +1 @@
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package/lib/commonjs/cli/structure-info/model.js

@@ -26,7 +26,7 @@ function downloadFromPdb(pdb) {
         var parsed;
         return (0, tslib_1.__generator)(this, function (_a) {
             switch (_a.label) {
-                case 0: return [4 /*yield*/, (0, helpers_1.downloadCif)("http://www.ebi.ac.uk/pdbe/static/entry/" + pdb + "_updated.cif", false)];
+                case 0: return [4 /*yield*/, (0, helpers_1.downloadCif)("http://www.ebi.ac.uk/pdbe/static/entry/".concat(pdb, "_updated.cif"), false)];
                 case 1:
                     parsed = _a.sent();
                     return [2 /*return*/, parsed.blocks[0]];
@@ -55,7 +55,7 @@ function atomLabel(model, aI) {
     var label_asym_id = chains.label_asym_id;
     var rI = residueAtomSegments.index[aI];
     var cI = chainAtomSegments.index[aI];
-    return label_asym_id.value(cI) + " " + label_comp_id.value(aI) + " " + label_seq_id.value(rI) + " " + label_atom_id.value(aI);
+    return "".concat(label_asym_id.value(cI), " ").concat(label_comp_id.value(aI), " ").concat(label_seq_id.value(rI), " ").concat(label_atom_id.value(aI));
 }
 exports.atomLabel = atomLabel;
 function residueLabel(model, rI) {
@@ -65,7 +65,7 @@ function residueLabel(model, rI) {
     var label_asym_id = chains.label_asym_id;
     var aI = residueAtomSegments.offsets[rI];
     var cI = chainAtomSegments.index[aI];
-    return label_asym_id.value(cI) + " " + label_comp_id.value(aI) + " " + label_seq_id.value(rI);
+    return "".concat(label_asym_id.value(cI), " ").concat(label_comp_id.value(aI), " ").concat(label_seq_id.value(rI));
 }
 exports.residueLabel = residueLabel;
 function printSecStructure(model) {
@@ -84,7 +84,7 @@ function printSecStructure(model) {
         rI--;
         var e = elements[key[start]];
         if (e.kind !== 'none')
-            console.log(e.kind + ": " + residueLabel(model, start) + " - " + residueLabel(model, rI));
+            console.log("".concat(e.kind, ": ").concat(residueLabel(model, start), " - ").concat(residueLabel(model, rI)));
         rI++;
     }
 }
@@ -105,7 +105,7 @@ function printBonds(structure, showIntra, showInter) {
                 var x = a[bI], y = b[bI];
                 if (x >= y)
                     continue;
-                console.log(atomLabel(model, elements[x]) + " -- " + atomLabel(model, elements[y]));
+                console.log("".concat(atomLabel(model, elements[x]), " -- ").concat(atomLabel(model, elements[y])));
             }
         }
     }
@@ -123,12 +123,12 @@ function printBonds(structure, showIntra, showInter) {
                 var unitA = pairBonds.unitA, unitB = pairBonds.unitB, edgeCount = pairBonds.edgeCount;
                 var uA = structure.unitMap.get(unitA);
                 var uB = structure.unitMap.get(unitB);
-                console.log(unitA + " - " + unitB + ": " + edgeCount + " bond(s)");
+                console.log("".concat(unitA, " - ").concat(unitB, ": ").concat(edgeCount, " bond(s)"));
                 for (var _h = 0, _k = pairBonds.connectedIndices; _h < _k.length; _h++) {
                     var aI = _k[_h];
                     for (var _l = 0, _m = pairBonds.getEdges(aI); _l < _m.length; _l++) {
                         var bond = _m[_l];
-                        console.log(atomLabel(uA.model, uA.elements[aI]) + " -- " + atomLabel(uB.model, uB.elements[bond.indexB]));
+                        console.log("".concat(atomLabel(uA.model, uA.elements[aI]), " -- ").concat(atomLabel(uB.model, uB.elements[bond.indexB])));
                     }
                 }
             }
@@ -143,8 +143,8 @@ function printSequence(model) {
         var key = _b[_a];
         var _c = byEntityKey[+key], sequence = _c.sequence, entityId = _c.entityId;
         var seqId = sequence.seqId, compId = sequence.compId;
-        console.log(entityId + " (" + sequence.kind + " " + seqId.value(0) + ", " + seqId.value(seqId.rowCount - 1) + ") (" + compId.value(0) + ", " + compId.value(compId.rowCount - 1) + ")");
-        console.log("" + sequence_1.Sequence.getSequenceString(sequence));
+        console.log("".concat(entityId, " (").concat(sequence.kind, " ").concat(seqId.value(0), ", ").concat(seqId.value(seqId.rowCount - 1), ") (").concat(compId.value(0), ", ").concat(compId.value(compId.rowCount - 1), ")"));
+        console.log("".concat(sequence_1.Sequence.getSequenceString(sequence)));
     }
     console.log();
 }
@@ -162,7 +162,7 @@ function printRings(structure) {
         }
         if (all.length > 5)
             fps.push('...');
-        console.log("Unit " + unit.id + ", " + all.length + " ring(s), " + byFingerprint.size + " different fingerprint(s).\n  " + fps.join(', '));
+        console.log("Unit ".concat(unit.id, ", ").concat(all.length, " ring(s), ").concat(byFingerprint.size, " different fingerprint(s).\n  ").concat(fps.join(', ')));
     }
     console.log();
 }
@@ -176,10 +176,10 @@ function printUnits(structure) {
         var elements = unit.elements;
         var size = int_1.OrderedSet.size(elements);
         if (structure_1.Unit.isAtomic(l.unit)) {
-            console.log("Atomic unit " + unit.id + " " + unit.conformation.operator.name + ": " + size + " elements");
+            console.log("Atomic unit ".concat(unit.id, " ").concat(unit.conformation.operator.name, ": ").concat(size, " elements"));
         }
         else if (structure_1.Unit.isCoarse(l.unit)) {
-            console.log("Coarse unit " + unit.id + " " + unit.conformation.operator.name + " (" + (structure_1.Unit.isSpheres(l.unit) ? 'spheres' : 'gaussians') + "): " + size + " elements.");
+            console.log("Coarse unit ".concat(unit.id, " ").concat(unit.conformation.operator.name, " (").concat(structure_1.Unit.isSpheres(l.unit) ? 'spheres' : 'gaussians', "): ").concat(size, " elements."));
             var props = structure_1.StructureProperties.coarse;
             var modelSeq = l.unit.model.sequence;
             for (var j = 0, _j = Math.min(size, 3); j < _j; j++) {
@@ -189,7 +189,7 @@ function printUnits(structure) {
                 var compId = modelSeq.byEntityKey[props.entityKey(l)].sequence.compId.value;
                 for (var e = start; e <= end; e++)
                     residues.push(compId(e));
-                console.log(props.asym_id(l) + ":" + start + "-" + end + " (" + residues.join('-') + ") " + props.asym_id(l) + " [" + props.x(l).toFixed(2) + ", " + props.y(l).toFixed(2) + ", " + props.z(l).toFixed(2) + "]");
+                console.log("".concat(props.asym_id(l), ":").concat(start, "-").concat(end, " (").concat(residues.join('-'), ") ").concat(props.asym_id(l), " [").concat(props.x(l).toFixed(2), ", ").concat(props.y(l).toFixed(2), ", ").concat(props.z(l).toFixed(2), "]"));
             }
             if (size > 3)
                 console.log("...");
@@ -203,10 +203,10 @@ function printSymmetryInfo(model) {
     if (!symmetry)
         return;
     var _a = symmetry.spacegroup.cell, size = _a.size, anglesInRadians = _a.anglesInRadians;
-    console.log("Spacegroup: " + symmetry.spacegroup.name + " size: " + linear_algebra_1.Vec3.toString(size) + " angles: " + linear_algebra_1.Vec3.toString(anglesInRadians));
-    console.log("Assembly names: " + symmetry.assemblies.map(function (a) { return a.id; }).join(', '));
+    console.log("Spacegroup: ".concat(symmetry.spacegroup.name, " size: ").concat(linear_algebra_1.Vec3.toString(size), " angles: ").concat(linear_algebra_1.Vec3.toString(anglesInRadians)));
+    console.log("Assembly names: ".concat(symmetry.assemblies.map(function (a) { return a.id; }).join(', ')));
     // NCS example: 1auy
-    console.log("NCS operators: " + (symmetry.ncsOperators && symmetry.ncsOperators.map(function (a) { return a.name; }).join(', ')));
+    console.log("NCS operators: ".concat(symmetry.ncsOperators && symmetry.ncsOperators.map(function (a) { return a.name; }).join(', ')));
 }
 exports.printSymmetryInfo = printSymmetryInfo;
 function printModelStats(models) {
@@ -224,10 +224,10 @@ function printModelStats(models) {
                 case 2:
                     m = _a.sent();
                     if (m.coarseHierarchy.isDefined) {
-                        console.log(m.label + " " + m.modelNum + ": " + m.atomicHierarchy.atoms._rowCount + " atom(s), " + m.coarseHierarchy.spheres.count + " sphere(s), " + m.coarseHierarchy.gaussians.count + " gaussian(s)");
+                        console.log("".concat(m.label, " ").concat(m.modelNum, ": ").concat(m.atomicHierarchy.atoms._rowCount, " atom(s), ").concat(m.coarseHierarchy.spheres.count, " sphere(s), ").concat(m.coarseHierarchy.gaussians.count, " gaussian(s)"));
                     }
                     else {
-                        console.log(m.label + " " + m.modelNum + ": " + m.atomicHierarchy.atoms._rowCount + " atom(s)");
+                        console.log("".concat(m.label, " ").concat(m.modelNum, ": ").concat(m.atomicHierarchy.atoms._rowCount, " atom(s)"));
                     }
                     _a.label = 3;
                 case 3: