molstar 2.3.3 → 2.3.8
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +20 -20
- package/README.md +176 -176
- package/build/viewer/embedded.html +43 -43
- package/build/viewer/index.html +94 -88
- package/build/viewer/molstar.css +1 -2
- package/build/viewer/molstar.js +1 -1
- package/lib/apps/docking-viewer/index.html +36 -36
- package/lib/apps/docking-viewer/index.js +1 -1
- package/lib/apps/docking-viewer/index.js.map +1 -1
- package/lib/apps/viewer/embedded.html +43 -43
- package/lib/apps/viewer/index.d.ts +296 -5
- package/lib/apps/viewer/index.html +94 -88
- package/lib/apps/viewer/index.js +99 -9
- package/lib/apps/viewer/index.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/cli/chem-comp-dict/util.d.ts +4 -4
- package/lib/cli/chem-comp-dict/util.js +2 -2
- package/lib/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/cli/cif2bcif/converter.js +2 -2
- package/lib/cli/cif2bcif/converter.js.map +1 -1
- package/lib/cli/cifschema/index.js +12 -12
- package/lib/cli/cifschema/index.js.map +1 -1
- package/lib/cli/cifschema/util/cif-dic.js +19 -19
- package/lib/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/cli/cifschema/util/generate.js +21 -21
- package/lib/cli/cifschema/util/generate.js.map +1 -1
- package/lib/cli/cifschema/util/schema.js +1 -1
- package/lib/cli/cifschema/util/schema.js.map +1 -1
- package/lib/cli/lipid-params/index.js +3 -3
- package/lib/cli/lipid-params/index.js.map +1 -1
- package/lib/cli/state-docs/index.js +4 -4
- package/lib/cli/state-docs/index.js.map +1 -1
- package/lib/cli/state-docs/pd-to-md.js +10 -10
- package/lib/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/cli/structure-info/model.js +18 -18
- package/lib/cli/structure-info/model.js.map +1 -1
- package/lib/cli/structure-info/volume.js +1 -1
- package/lib/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js +1 -1
- package/lib/commonjs/apps/docking-viewer/index.js.map +1 -1
- package/lib/commonjs/apps/docking-viewer/viewport.d.ts +2 -2
- package/lib/commonjs/apps/viewer/index.d.ts +296 -5
- package/lib/commonjs/apps/viewer/index.js +99 -9
- package/lib/commonjs/apps/viewer/index.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-table.js +3 -3
- package/lib/commonjs/cli/chem-comp-dict/create-table.js.map +1 -1
- package/lib/commonjs/cli/chem-comp-dict/util.d.ts +6 -6
- package/lib/commonjs/cli/chem-comp-dict/util.js +2 -2
- package/lib/commonjs/cli/chem-comp-dict/util.js.map +1 -1
- package/lib/commonjs/cli/cif2bcif/converter.js +2 -2
- package/lib/commonjs/cli/cif2bcif/converter.js.map +1 -1
- package/lib/commonjs/cli/cif2bcif/index.js +0 -0
- package/lib/commonjs/cli/cifschema/index.js +12 -12
- package/lib/commonjs/cli/cifschema/index.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/cif-dic.js +19 -19
- package/lib/commonjs/cli/cifschema/util/cif-dic.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/generate.js +21 -21
- package/lib/commonjs/cli/cifschema/util/generate.js.map +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js +1 -1
- package/lib/commonjs/cli/cifschema/util/schema.js.map +1 -1
- package/lib/commonjs/cli/lipid-params/index.js +3 -3
- package/lib/commonjs/cli/lipid-params/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/index.js +4 -4
- package/lib/commonjs/cli/state-docs/index.js.map +1 -1
- package/lib/commonjs/cli/state-docs/pd-to-md.js +10 -10
- package/lib/commonjs/cli/state-docs/pd-to-md.js.map +1 -1
- package/lib/commonjs/cli/structure-info/model.js +18 -18
- package/lib/commonjs/cli/structure-info/model.js.map +1 -1
- package/lib/commonjs/cli/structure-info/volume.js +1 -1
- package/lib/commonjs/cli/structure-info/volume.js.map +1 -1
- package/lib/commonjs/examples/basic-wrapper/superposition.js +3 -3
- package/lib/commonjs/examples/basic-wrapper/superposition.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/mapping.js +2 -2
- package/lib/commonjs/examples/domain-annotation-server/mapping.js.map +1 -1
- package/lib/commonjs/examples/domain-annotation-server/server.js +3 -3
- package/lib/commonjs/examples/domain-annotation-server/server.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js +3 -3
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js.map +1 -1
- package/lib/commonjs/examples/proteopedia-wrapper/index.js +2 -2
- package/lib/commonjs/examples/proteopedia-wrapper/index.js.map +1 -1
- package/lib/commonjs/examples/task.js +6 -6
- package/lib/commonjs/examples/task.js.map +1 -1
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js +2 -2
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js.map +1 -1
- package/lib/commonjs/extensions/anvil/behavior.d.ts +2 -2
- package/lib/commonjs/extensions/anvil/representation.d.ts +5 -5
- package/lib/commonjs/extensions/anvil/representation.js +1 -1
- package/lib/commonjs/extensions/anvil/representation.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/color/generate.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/color/generate.js +1 -1
- package/lib/commonjs/extensions/cellpack/color/provided.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/color/provided.js +1 -1
- package/lib/commonjs/extensions/cellpack/curve.d.ts +2 -2
- package/lib/commonjs/extensions/cellpack/curve.js +2 -2
- package/lib/commonjs/extensions/cellpack/data.d.ts +32 -0
- package/lib/commonjs/extensions/cellpack/index.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/index.js +1 -1
- package/lib/commonjs/extensions/cellpack/model.d.ts +5 -3
- package/lib/commonjs/extensions/cellpack/model.js +203 -65
- package/lib/commonjs/extensions/cellpack/model.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/preset.d.ts +2 -1
- package/lib/commonjs/extensions/cellpack/preset.js +12 -15
- package/lib/commonjs/extensions/cellpack/preset.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/property.d.ts +1 -1
- package/lib/commonjs/extensions/cellpack/property.js +1 -1
- package/lib/commonjs/extensions/cellpack/representation.d.ts +53 -0
- package/lib/commonjs/extensions/cellpack/representation.js +47 -0
- package/lib/commonjs/extensions/cellpack/representation.js.map +1 -0
- package/lib/commonjs/extensions/cellpack/state.d.ts +16 -5
- package/lib/commonjs/extensions/cellpack/state.js +234 -27
- package/lib/commonjs/extensions/cellpack/state.js.map +1 -1
- package/lib/commonjs/extensions/cellpack/util.d.ts +3 -1
- package/lib/commonjs/extensions/cellpack/util.js +34 -6
- package/lib/commonjs/extensions/cellpack/util.js.map +1 -1
- package/lib/commonjs/extensions/dnatco/confal-pyramids/behavior.d.ts +1 -1
- package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +6 -6
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js +7 -7
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js.map +1 -1
- package/lib/commonjs/extensions/g3d/data.js +2 -2
- package/lib/commonjs/extensions/g3d/data.js.map +1 -1
- package/lib/commonjs/extensions/g3d/model.js +2 -2
- package/lib/commonjs/extensions/g3d/model.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/controls.js +2 -2
- package/lib/commonjs/extensions/geo-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/glb-exporter.js +1 -1
- package/lib/commonjs/extensions/geo-export/glb-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/mesh-exporter.d.ts +1 -1
- package/lib/commonjs/extensions/geo-export/obj-exporter.js +3 -3
- package/lib/commonjs/extensions/geo-export/obj-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js +1 -1
- package/lib/commonjs/extensions/geo-export/stl-exporter.js.map +1 -1
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js +5 -5
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js.map +1 -1
- package/lib/commonjs/extensions/mp4-export/controls.js +1 -1
- package/lib/commonjs/extensions/mp4-export/controls.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +6 -6
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js +3 -3
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.d.ts +12 -12
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -1
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js +7 -7
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.d.ts +3 -3
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js +11 -11
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js.map +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +25 -10
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js +4 -4
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/camera/util.d.ts +4 -3
- package/lib/commonjs/mol-canvas3d/camera/util.js +15 -16
- package/lib/commonjs/mol-canvas3d/camera/util.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/camera.d.ts +11 -3
- package/lib/commonjs/mol-canvas3d/camera.js +21 -1
- package/lib/commonjs/mol-canvas3d/camera.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +18 -8
- package/lib/commonjs/mol-canvas3d/canvas3d.js +11 -5
- package/lib/commonjs/mol-canvas3d/canvas3d.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/controls/trackball.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +3 -3
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +1 -1
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js +1 -1
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/helper/interaction-events.d.ts +13 -4
- package/lib/commonjs/mol-canvas3d/helper/interaction-events.js +43 -9
- package/lib/commonjs/mol-canvas3d/helper/interaction-events.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/draw.js +1 -0
- package/lib/commonjs/mol-canvas3d/passes/draw.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/image.d.ts +2 -2
- package/lib/commonjs/mol-canvas3d/passes/pick.d.ts +5 -2
- package/lib/commonjs/mol-canvas3d/passes/pick.js +17 -3
- package/lib/commonjs/mol-canvas3d/passes/pick.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/passes/wboit.js +1 -1
- package/lib/commonjs/mol-canvas3d/passes/wboit.js.map +1 -1
- package/lib/commonjs/mol-canvas3d/util.js +1 -1
- package/lib/commonjs/mol-canvas3d/util.js.map +1 -1
- package/lib/commonjs/mol-data/db/table.js +1 -1
- package/lib/commonjs/mol-data/db/table.js.map +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js +1 -1
- package/lib/commonjs/mol-data/int/_spec/sorted-ranges.spec.js.map +1 -1
- package/lib/commonjs/mol-data/int/impl/ordered-set.d.ts +3 -3
- package/lib/commonjs/mol-data/int/impl/sorted-array.d.ts +1 -1
- package/lib/commonjs/mol-data/int/impl/sorted-array.js +2 -2
- package/lib/commonjs/mol-data/int/impl/sorted-array.js.map +1 -1
- package/lib/commonjs/mol-data/int/tuple.js +1 -1
- package/lib/commonjs/mol-data/int/tuple.js.map +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js +1 -1
- package/lib/commonjs/mol-data/util/_spec/interval-iterator.spec.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/base.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js +10 -1
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/image/image.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/image/image.js +4 -1
- package/lib/commonjs/mol-geo/geometry/image/image.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/lines/lines.js +1 -1
- package/lib/commonjs/mol-geo/geometry/lines/lines.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.js +19 -11
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.d.ts +2 -2
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js +57 -15
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/points/points.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/points/points.js +1 -1
- package/lib/commonjs/mol-geo/geometry/points/points.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +2 -1
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js +1 -1
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/text/text.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/text/text.js +1 -1
- package/lib/commonjs/mol-geo/geometry/text/text.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +6 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js.map +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/cylinders.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/cylinders.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/cylinders.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/direct-volume.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/direct-volume.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/direct-volume.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/gl.d.ts +9 -0
- package/lib/commonjs/mol-gl/_spec/gl.js +33 -0
- package/lib/commonjs/mol-gl/_spec/gl.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/gl.shim.js +5 -5
- package/lib/commonjs/mol-gl/_spec/gl.shim.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/image.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/image.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/image.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/lines.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/lines.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/lines.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/mesh.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/mesh.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/mesh.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/points.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/points.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/points.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/renderer.spec.d.ts +7 -1
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js +6 -44
- package/lib/commonjs/mol-gl/_spec/renderer.spec.js.map +1 -1
- package/lib/commonjs/mol-gl/_spec/spheres.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/spheres.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/spheres.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/text.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/text.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/text.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.d.ts +6 -0
- package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.js +42 -0
- package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.js.map +1 -0
- package/lib/commonjs/mol-gl/compute/grid3d.js +3 -3
- package/lib/commonjs/mol-gl/compute/grid3d.js.map +1 -1
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js +4 -4
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js.map +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js +1 -1
- package/lib/commonjs/mol-gl/renderable/util.js.map +1 -1
- package/lib/commonjs/mol-gl/renderer.d.ts +3 -2
- package/lib/commonjs/mol-gl/renderer.js +3 -0
- package/lib/commonjs/mol-gl/renderer.js.map +1 -1
- package/lib/commonjs/mol-gl/scene.js +1 -1
- package/lib/commonjs/mol-gl/scene.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
- package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/lines.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/lines.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader/lines.vert.js.map +1 -1
- package/lib/commonjs/mol-gl/shader/points.vert.d.ts +1 -1
- package/lib/commonjs/mol-gl/shader/points.vert.js +1 -1
- package/lib/commonjs/mol-gl/shader/points.vert.js.map +1 -1
- package/lib/commonjs/mol-gl/shader-code.js +8 -8
- package/lib/commonjs/mol-gl/shader-code.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/buffer.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/buffer.js +5 -5
- package/lib/commonjs/mol-gl/webgl/buffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/compat.js +3 -3
- package/lib/commonjs/mol-gl/webgl/compat.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/context.js +6 -4
- package/lib/commonjs/mol-gl/webgl/context.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js +1 -1
- package/lib/commonjs/mol-gl/webgl/framebuffer.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/program.d.ts +1 -1
- package/lib/commonjs/mol-gl/webgl/program.js +14 -12
- package/lib/commonjs/mol-gl/webgl/program.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/render-item.d.ts +3 -2
- package/lib/commonjs/mol-gl/webgl/render-item.js +6 -3
- package/lib/commonjs/mol-gl/webgl/render-item.js.map +1 -1
- package/lib/commonjs/mol-gl/webgl/resources.js +1 -1
- package/lib/commonjs/mol-gl/webgl/resources.js.map +1 -1
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<svg class="makeStyles-root-46" viewBox="0 0 190 36" xmlns="http://www.w3.org/2000/svg"><path d="M32.2591 28.6707C32.2591 32.3914 29.2421 35.407 25.5214 35.407C22.0752 35.407 19.2338 32.8206 18.8325 29.4831V29.4775C18.8143 29.3312 18.8018 29.1835 18.7934 29.0344C18.7934 29.0316 18.7921 29.0274 18.7921 29.0246V29.0177C18.7865 28.902 18.7837 28.7864 18.7837 28.6707C18.7837 26.2557 20.0532 24.1389 21.9609 22.9503C21.9623 22.9489 21.9651 22.9489 21.9665 22.9475C22.0933 22.8666 22.2243 22.7914 22.3581 22.7203C22.3581 22.7203 22.3595 22.7203 22.3595 22.7189C23.3029 22.2173 24.3787 21.933 25.5214 21.933C29.2421 21.933 32.2591 24.9486 32.2591 28.6707Z"></path><path d="M25.5214 14.0692C29.2421 14.0692 32.2591 11.0522 32.2591 7.33146C32.2591 3.61074 29.2421 0.59375 25.5214 0.59375C22.0529 0.59375 19.1962 3.21637 18.8255 6.58592C18.8185 6.67092 18.8116 6.75454 18.8018 6.83815C18.7893 7.00119 18.7837 7.16563 18.7837 7.33146C18.7837 9.73669 20.0434 11.8465 21.94 13.038C22.0891 13.116 22.2355 13.201 22.3776 13.2916C22.3783 13.2923 22.379 13.2926 22.3797 13.293C22.3804 13.2933 22.3811 13.2937 22.3818 13.2944C23.3196 13.7891 24.3871 14.0692 25.5214 14.0692Z"></path><path d="M19.3645 12.4113C20.2926 12.4113 21.1694 12.638 21.94 13.038C20.0434 11.8465 18.7837 9.73669 18.7837 7.33146C18.7837 7.16563 18.7893 7.00119 18.8018 6.83815C18.4688 9.76455 16.1385 12.0866 13.2065 12.4044C13.8545 13.1193 14.3785 13.9484 14.745 14.857C15.7497 13.3798 17.4443 12.4113 19.3645 12.4113Z"></path><path d="M14.7312 21.1249V21.1236C14.1279 20.2331 13.7767 19.1587 13.7767 18.0007V17.9728C13.7767 15.3084 12.2285 13.0035 9.9835 11.911C9.98141 11.9103 9.97967 11.9096 9.97793 11.9089C9.97619 11.9082 9.97444 11.9075 9.97235 11.9068C9.96817 11.904 9.96538 11.9026 9.9612 11.9012C9.95981 11.9012 9.95981 11.8998 9.95981 11.8998C9.9417 11.8915 9.92394 11.8831 9.90618 11.8747C9.8884 11.8664 9.87063 11.858 9.85251 11.8497C9.82046 11.8343 9.78701 11.819 9.75357 11.8051L9.74521 11.8009C8.91745 11.4372 8.0019 11.2351 7.03898 11.2351C3.31826 11.2351 0.30127 14.2521 0.30127 17.9728C0.30127 21.6935 3.31826 24.7105 7.03898 24.7105C7.98797 24.7105 8.89098 24.514 9.71037 24.1601C9.71246 24.1594 9.7142 24.1583 9.71594 24.1573C9.71768 24.1562 9.71943 24.1552 9.72152 24.1545C9.8107 24.1169 9.8985 24.0765 9.9849 24.0333L9.98629 24.0319C10.7625 23.6919 11.6181 23.5037 12.5197 23.5037C12.7524 23.5037 12.9824 23.5163 13.2081 23.54C13.2082 23.5399 13.2081 23.54 13.2081 23.54C15.0168 23.7365 16.5971 24.695 17.6185 26.0885C17.9195 25.1688 18.3752 24.3201 18.9563 23.5732C17.1964 23.4464 15.6635 22.5058 14.7312 21.1249Z"></path><g clip-path="url(#clip0)"><path d="M106.391 18.0021C106.391 11.3724 101.039 6 94.4389 6H88.4585C81.8581 6 76.5061 11.3724 76.5061 18.0021V30.0042H81.2845V18.0021C81.2845 14.0268 84.4941 10.8008 88.4585 10.8008H94.4347C98.395 10.8008 101.609 14.0226 101.609 18.0021V30.0042H106.391V18.0021Z"></path><path d="M149.432 6H142.258C135.653 6 130.301 11.3724 130.301 18.0021C130.301 24.6319 135.653 30.0042 142.258 30.0042H149.432C156.036 30.0042 161.388 24.6319 161.388 18.0021C161.388 11.3724 156.032 6 149.432 6ZM149.432 25.1992H142.258C138.297 25.1992 135.084 21.9774 135.084 17.9979C135.084 14.0183 138.293 10.7966 142.258 10.7966H149.432C153.392 10.7966 156.606 14.0183 156.606 17.9979C156.606 21.9774 153.392 25.1992 149.432 25.1992Z"></path><path d="M74.1151 25.1992H58.5736C55.4526 25.1992 52.804 23.1924 51.8171 20.3983H74.1151V17.9979C74.1151 17.1808 74.1868 16.3807 74.3175 15.5975H51.8171C52.804 12.8033 55.4526 10.7966 58.5736 10.7966H76.0383C77.1475 8.87458 78.6911 7.22773 80.5299 6H58.5736C51.969 6 46.6169 11.3724 46.6169 18.0021C46.6169 24.6276 51.969 30 58.5736 30H74.1151V25.1992Z"></path><path d="M120.74 6H115.958H102.369C104.212 7.22773 105.751 8.87458 106.861 10.8008H115.958V30H120.74V10.8008H129.838C130.947 8.87458 132.486 7.22773 134.329 6H120.74Z"></path><path d="M182.906 15.6017H169.756C168.436 15.6017 167.365 14.5264 167.365 13.2013C167.365 11.8762 168.436 10.8008 169.756 10.8008H188.882V6H169.756C165.796 6 162.582 9.22173 162.582 13.2013C162.582 17.1808 165.791 20.4025 169.756 20.4025H182.906C184.226 20.4025 185.297 21.4779 185.297 22.803C185.297 24.1281 184.226 25.2034 182.906 25.2034H161.852C160.743 27.1297 159.199 28.7765 157.361 30.0042H182.906C186.866 30.0042 190.08 26.7825 190.08 22.803C190.08 18.8234 186.866 15.6017 182.906 15.6017Z"></path></g><defs><clipPath id="clip0"><rect width="190" height="24" fill="white" transform="translate(0 6)"></rect></clipPath></defs></svg>
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$('url').onchange = function (e) { url = e.target.value; }
|
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67
|
-
$('assemblyId').value = assemblyId;
|
|
68
|
-
$('assemblyId').onchange = function (e) { assemblyId = e.target.value; }
|
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69
|
-
$('format').value = format;
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70
|
-
$('format').onchange = function (e) { format = e.target.value; }
|
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71
|
-
|
|
72
|
-
BasicMolStarWrapper.init('app' /** or document.getElementById('app') */);
|
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73
|
-
BasicMolStarWrapper.setBackground(0xffffff);
|
|
74
|
-
|
|
75
|
-
addControl('Load Asym Unit', () => BasicMolStarWrapper.load({ url: url, format: format }));
|
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76
|
-
addControl('Load Assembly', () => BasicMolStarWrapper.load({ url: url, format: format, assemblyId: assemblyId }));
|
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77
|
-
|
|
78
|
-
addSeparator();
|
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79
|
-
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|
80
|
-
addHeader('Camera');
|
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81
|
-
addControl('Toggle Spin', () => BasicMolStarWrapper.toggleSpin());
|
|
82
|
-
|
|
83
|
-
addSeparator();
|
|
84
|
-
|
|
85
|
-
addHeader('Animation');
|
|
86
|
-
|
|
87
|
-
// adjust this number to make the animation faster or slower
|
|
88
|
-
// requires to "restart" the animation if changed
|
|
89
|
-
BasicMolStarWrapper.animate.modelIndex.targetFps = 30;
|
|
90
|
-
|
|
91
|
-
addControl('Play To End', () => BasicMolStarWrapper.animate.modelIndex.onceForward());
|
|
92
|
-
addControl('Play To Start', () => BasicMolStarWrapper.animate.modelIndex.onceBackward());
|
|
93
|
-
addControl('Play Palindrome', () => BasicMolStarWrapper.animate.modelIndex.palindrome());
|
|
94
|
-
addControl('Play Loop', () => BasicMolStarWrapper.animate.modelIndex.loop());
|
|
95
|
-
addControl('Stop', () => BasicMolStarWrapper.animate.modelIndex.stop());
|
|
96
|
-
|
|
97
|
-
addHeader('Misc');
|
|
98
|
-
|
|
99
|
-
addControl('Apply Stripes', () => BasicMolStarWrapper.coloring.applyStripes());
|
|
100
|
-
addControl('Apply Custom Theme', () => BasicMolStarWrapper.coloring.applyCustomTheme());
|
|
101
|
-
addControl('Default Coloring', () => BasicMolStarWrapper.coloring.applyDefault());
|
|
102
|
-
|
|
103
|
-
addHeader('Interactivity');
|
|
104
|
-
addControl('Highlight seq_id=7', () => BasicMolStarWrapper.interactivity.highlightOn());
|
|
105
|
-
addControl('Clear Highlight', () => BasicMolStarWrapper.interactivity.clearHighlight());
|
|
106
|
-
|
|
107
|
-
addHeader('Tests');
|
|
108
|
-
|
|
109
|
-
addControl('Static Superposition', () => BasicMolStarWrapper.tests.staticSuperposition());
|
|
110
|
-
addControl('Dynamic Superposition', () => BasicMolStarWrapper.tests.dynamicSuperposition());
|
|
111
|
-
addControl('Validation Tooltip', () => BasicMolStarWrapper.tests.toggleValidationTooltip());
|
|
112
|
-
|
|
113
|
-
addControl('Show Toasts', () => BasicMolStarWrapper.tests.showToasts());
|
|
114
|
-
addControl('Hide Toasts', () => BasicMolStarWrapper.tests.hideToasts());
|
|
115
|
-
|
|
116
|
-
////////////////////////////////////////////////////////
|
|
117
|
-
|
|
118
|
-
function addControl(label, action) {
|
|
119
|
-
var btn = document.createElement('button');
|
|
120
|
-
btn.onclick = action;
|
|
121
|
-
btn.innerText = label;
|
|
122
|
-
$('controls').appendChild(btn);
|
|
123
|
-
}
|
|
124
|
-
|
|
125
|
-
function addSeparator() {
|
|
126
|
-
var hr = document.createElement('hr');
|
|
127
|
-
$('controls').appendChild(hr);
|
|
128
|
-
}
|
|
129
|
-
|
|
130
|
-
function addHeader(header) {
|
|
131
|
-
var h = document.createElement('h3');
|
|
132
|
-
h.innerText = header;
|
|
133
|
-
$('controls').appendChild(h);
|
|
134
|
-
}
|
|
135
|
-
</script>
|
|
136
|
-
</body>
|
|
1
|
+
<!DOCTYPE html>
|
|
2
|
+
<html lang="en">
|
|
3
|
+
<head>
|
|
4
|
+
<meta charset="utf-8" />
|
|
5
|
+
<meta name="viewport" content="width=device-width, user-scalable=no, minimum-scale=1.0, maximum-scale=1.0">
|
|
6
|
+
<title>Mol* Plugin Wrapper</title>
|
|
7
|
+
<style>
|
|
8
|
+
* {
|
|
9
|
+
margin: 0;
|
|
10
|
+
padding: 0;
|
|
11
|
+
box-sizing: border-box;
|
|
12
|
+
}
|
|
13
|
+
#app {
|
|
14
|
+
position: absolute;
|
|
15
|
+
left: 160px;
|
|
16
|
+
top: 100px;
|
|
17
|
+
width: 600px;
|
|
18
|
+
height: 600px;
|
|
19
|
+
border: 1px solid #ccc;
|
|
20
|
+
}
|
|
21
|
+
|
|
22
|
+
#controls {
|
|
23
|
+
position: absolute;
|
|
24
|
+
width: 130px;
|
|
25
|
+
top: 10px;
|
|
26
|
+
left: 10px;
|
|
27
|
+
}
|
|
28
|
+
|
|
29
|
+
#controls > button {
|
|
30
|
+
display: block;
|
|
31
|
+
width: 100%;
|
|
32
|
+
text-align: left;
|
|
33
|
+
}
|
|
34
|
+
|
|
35
|
+
#controls > hr {
|
|
36
|
+
margin: 5px 0;
|
|
37
|
+
}
|
|
38
|
+
|
|
39
|
+
#controls > input, #controls > select {
|
|
40
|
+
width: 100%;
|
|
41
|
+
display: block;
|
|
42
|
+
}
|
|
43
|
+
</style>
|
|
44
|
+
<link rel="stylesheet" type="text/css" href="molstar.css" />
|
|
45
|
+
<script type="text/javascript" src="./index.js"></script>
|
|
46
|
+
</head>
|
|
47
|
+
<body>
|
|
48
|
+
<div id='controls'>
|
|
49
|
+
<h3>Source</h3>
|
|
50
|
+
<input type='text' id='url' placeholder='url' />
|
|
51
|
+
<input type='text' id='assemblyId' placeholder='assembly id' />
|
|
52
|
+
<select id='format'>
|
|
53
|
+
<option value='mmcif' selected>mmCIF</option>
|
|
54
|
+
<option value='pdb'>PDB</option>
|
|
55
|
+
</select>
|
|
56
|
+
</div>
|
|
57
|
+
<div id="app"></div>
|
|
58
|
+
<script>
|
|
59
|
+
function $(id) { return document.getElementById(id); }
|
|
60
|
+
|
|
61
|
+
var pdbId = '1grm', assemblyId= '1';
|
|
62
|
+
var url = 'https://www.ebi.ac.uk/pdbe/static/entry/' + pdbId + '_updated.cif';
|
|
63
|
+
var format = 'mmcif';
|
|
64
|
+
|
|
65
|
+
$('url').value = url;
|
|
66
|
+
$('url').onchange = function (e) { url = e.target.value; }
|
|
67
|
+
$('assemblyId').value = assemblyId;
|
|
68
|
+
$('assemblyId').onchange = function (e) { assemblyId = e.target.value; }
|
|
69
|
+
$('format').value = format;
|
|
70
|
+
$('format').onchange = function (e) { format = e.target.value; }
|
|
71
|
+
|
|
72
|
+
BasicMolStarWrapper.init('app' /** or document.getElementById('app') */);
|
|
73
|
+
BasicMolStarWrapper.setBackground(0xffffff);
|
|
74
|
+
|
|
75
|
+
addControl('Load Asym Unit', () => BasicMolStarWrapper.load({ url: url, format: format }));
|
|
76
|
+
addControl('Load Assembly', () => BasicMolStarWrapper.load({ url: url, format: format, assemblyId: assemblyId }));
|
|
77
|
+
|
|
78
|
+
addSeparator();
|
|
79
|
+
|
|
80
|
+
addHeader('Camera');
|
|
81
|
+
addControl('Toggle Spin', () => BasicMolStarWrapper.toggleSpin());
|
|
82
|
+
|
|
83
|
+
addSeparator();
|
|
84
|
+
|
|
85
|
+
addHeader('Animation');
|
|
86
|
+
|
|
87
|
+
// adjust this number to make the animation faster or slower
|
|
88
|
+
// requires to "restart" the animation if changed
|
|
89
|
+
BasicMolStarWrapper.animate.modelIndex.targetFps = 30;
|
|
90
|
+
|
|
91
|
+
addControl('Play To End', () => BasicMolStarWrapper.animate.modelIndex.onceForward());
|
|
92
|
+
addControl('Play To Start', () => BasicMolStarWrapper.animate.modelIndex.onceBackward());
|
|
93
|
+
addControl('Play Palindrome', () => BasicMolStarWrapper.animate.modelIndex.palindrome());
|
|
94
|
+
addControl('Play Loop', () => BasicMolStarWrapper.animate.modelIndex.loop());
|
|
95
|
+
addControl('Stop', () => BasicMolStarWrapper.animate.modelIndex.stop());
|
|
96
|
+
|
|
97
|
+
addHeader('Misc');
|
|
98
|
+
|
|
99
|
+
addControl('Apply Stripes', () => BasicMolStarWrapper.coloring.applyStripes());
|
|
100
|
+
addControl('Apply Custom Theme', () => BasicMolStarWrapper.coloring.applyCustomTheme());
|
|
101
|
+
addControl('Default Coloring', () => BasicMolStarWrapper.coloring.applyDefault());
|
|
102
|
+
|
|
103
|
+
addHeader('Interactivity');
|
|
104
|
+
addControl('Highlight seq_id=7', () => BasicMolStarWrapper.interactivity.highlightOn());
|
|
105
|
+
addControl('Clear Highlight', () => BasicMolStarWrapper.interactivity.clearHighlight());
|
|
106
|
+
|
|
107
|
+
addHeader('Tests');
|
|
108
|
+
|
|
109
|
+
addControl('Static Superposition', () => BasicMolStarWrapper.tests.staticSuperposition());
|
|
110
|
+
addControl('Dynamic Superposition', () => BasicMolStarWrapper.tests.dynamicSuperposition());
|
|
111
|
+
addControl('Validation Tooltip', () => BasicMolStarWrapper.tests.toggleValidationTooltip());
|
|
112
|
+
|
|
113
|
+
addControl('Show Toasts', () => BasicMolStarWrapper.tests.showToasts());
|
|
114
|
+
addControl('Hide Toasts', () => BasicMolStarWrapper.tests.hideToasts());
|
|
115
|
+
|
|
116
|
+
////////////////////////////////////////////////////////
|
|
117
|
+
|
|
118
|
+
function addControl(label, action) {
|
|
119
|
+
var btn = document.createElement('button');
|
|
120
|
+
btn.onclick = action;
|
|
121
|
+
btn.innerText = label;
|
|
122
|
+
$('controls').appendChild(btn);
|
|
123
|
+
}
|
|
124
|
+
|
|
125
|
+
function addSeparator() {
|
|
126
|
+
var hr = document.createElement('hr');
|
|
127
|
+
$('controls').appendChild(hr);
|
|
128
|
+
}
|
|
129
|
+
|
|
130
|
+
function addHeader(header) {
|
|
131
|
+
var h = document.createElement('h3');
|
|
132
|
+
h.innerText = header;
|
|
133
|
+
$('controls').appendChild(h);
|
|
134
|
+
}
|
|
135
|
+
</script>
|
|
136
|
+
</body>
|
|
137
137
|
</html>
|
|
@@ -23,13 +23,13 @@ export function buildStaticSuperposition(plugin, src) {
|
|
|
23
23
|
case 1:
|
|
24
24
|
if (!(_i < src_1.length)) return [3 /*break*/, 7];
|
|
25
25
|
s = src_1[_i];
|
|
26
|
-
return [4 /*yield*/, loadStructure(plugin, "https://www.ebi.ac.uk/pdbe/static/entry/"
|
|
26
|
+
return [4 /*yield*/, loadStructure(plugin, "https://www.ebi.ac.uk/pdbe/static/entry/".concat(s.pdbId, "_updated.cif"), 'mmcif')];
|
|
27
27
|
case 2:
|
|
28
28
|
structure = (_a.sent()).structure;
|
|
29
29
|
return [4 /*yield*/, transform(plugin, structure, s.matrix)];
|
|
30
30
|
case 3:
|
|
31
31
|
_a.sent();
|
|
32
|
-
return [4 /*yield*/, plugin.builders.structure.tryCreateComponentFromExpression(structure, chainSelection(s.auth_asym_id), "Chain "
|
|
32
|
+
return [4 /*yield*/, plugin.builders.structure.tryCreateComponentFromExpression(structure, chainSelection(s.auth_asym_id), "Chain ".concat(s.auth_asym_id))];
|
|
33
33
|
case 4:
|
|
34
34
|
chain = _a.sent();
|
|
35
35
|
if (!chain) return [3 /*break*/, 6];
|
|
@@ -78,7 +78,7 @@ export function dynamicSuperpositionTest(plugin, src, comp_id) {
|
|
|
78
78
|
case 1:
|
|
79
79
|
if (!(_i < src_2.length)) return [3 /*break*/, 4];
|
|
80
80
|
s = src_2[_i];
|
|
81
|
-
return [4 /*yield*/, loadStructure(plugin, "https://www.ebi.ac.uk/pdbe/static/entry/"
|
|
81
|
+
return [4 /*yield*/, loadStructure(plugin, "https://www.ebi.ac.uk/pdbe/static/entry/".concat(s, "_updated.cif"), 'mmcif')];
|
|
82
82
|
case 2:
|
|
83
83
|
_a.sent();
|
|
84
84
|
_a.label = 3;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"superposition.js","sourceRoot":"","sources":["../../../src/examples/basic-wrapper/superposition.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,IAAI,EAAE,MAAM,+BAA+B,CAAC;AACrD,OAAO,EAAE,YAAY,EAAE,kBAAkB,EAAE,MAAM,2BAA2B,CAAC;AAC7E,OAAO,EAAE,SAAS,EAAE,MAAM,wDAAwD,CAAC;AAGnF,OAAO,EAAE,gBAAgB,IAAI,EAAE,EAAE,MAAM,mCAAmC,CAAC;AAE3E,OAAO,EAAE,OAAO,EAAE,MAAM,yCAAyC,CAAC;AAGlE,OAAO,EAAE,eAAe,EAAE,MAAM,mCAAmC,CAAC;AACpE,OAAO,EAAE,KAAK,EAAE,MAAM,uBAAuB,CAAC;AAQ9C,MAAM,UAAU,wBAAwB,CAAC,MAAqB,EAAE,GAA2B;IAA3F,iBASC;IARG,OAAO,MAAM,CAAC,eAAe,CAAC;;;;;0BACP,EAAH,WAAG;;;yBAAH,CAAA,iBAAG,CAAA;oBAAR,CAAC;oBACc,qBAAM,aAAa,CAAC,MAAM,EAAE,
|
|
1
|
+
{"version":3,"file":"superposition.js","sourceRoot":"","sources":["../../../src/examples/basic-wrapper/superposition.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,IAAI,EAAE,MAAM,+BAA+B,CAAC;AACrD,OAAO,EAAE,YAAY,EAAE,kBAAkB,EAAE,MAAM,2BAA2B,CAAC;AAC7E,OAAO,EAAE,SAAS,EAAE,MAAM,wDAAwD,CAAC;AAGnF,OAAO,EAAE,gBAAgB,IAAI,EAAE,EAAE,MAAM,mCAAmC,CAAC;AAE3E,OAAO,EAAE,OAAO,EAAE,MAAM,yCAAyC,CAAC;AAGlE,OAAO,EAAE,eAAe,EAAE,MAAM,mCAAmC,CAAC;AACpE,OAAO,EAAE,KAAK,EAAE,MAAM,uBAAuB,CAAC;AAQ9C,MAAM,UAAU,wBAAwB,CAAC,MAAqB,EAAE,GAA2B;IAA3F,iBASC;IARG,OAAO,MAAM,CAAC,eAAe,CAAC;;;;;0BACP,EAAH,WAAG;;;yBAAH,CAAA,iBAAG,CAAA;oBAAR,CAAC;oBACc,qBAAM,aAAa,CAAC,MAAM,EAAE,kDAA2C,CAAC,CAAC,KAAK,iBAAc,EAAE,OAAO,CAAC,EAAA;;oBAApH,SAAS,GAAK,CAAA,SAAsG,CAAA,UAA3G;oBACjB,qBAAM,SAAS,CAAC,MAAM,EAAE,SAAS,EAAE,CAAC,CAAC,MAAM,CAAC,EAAA;;oBAA5C,SAA4C,CAAC;oBAC/B,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,gCAAgC,CAAC,SAAS,EAAE,cAAc,CAAC,CAAC,CAAC,YAAY,CAAC,EAAE,gBAAS,CAAC,CAAC,YAAY,CAAE,CAAC,EAAA;;oBAA9I,KAAK,GAAG,SAAsI;yBAChJ,KAAK,EAAL,wBAAK;oBAAE,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,cAAc,CAAC,iBAAiB,CAAC,KAAK,EAAE,EAAE,IAAI,EAAE,SAAS,EAAE,CAAC,EAAA;;oBAA5F,SAA4F,CAAC;;;oBAJ5F,IAAG,CAAA;;;;;SAMtB,CAAC,CAAC;AACP,CAAC;AAED,MAAM,CAAC,IAAM,2BAA2B,GAA2B;IAC/D;QACI,KAAK,EAAE,MAAM,EAAE,YAAY,EAAE,GAAG,EAAE,MAAM,EAAE,IAAI,CAAC,QAAQ,EAAE;KAC5D;IACD;QACI,KAAK,EAAE,MAAM,EAAE,YAAY,EAAE,GAAG,EAAE,MAAM,EAAE,IAAI,CAAC,MAAM,CAAC;YAClD,CAAC,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,CAAC,OAAO,CAAC;YAC/B,CAAC,KAAK,EAAE,CAAC,KAAK,EAAE,KAAK,EAAE,MAAM,CAAC;YAC9B,CAAC,KAAK,EAAE,CAAC,KAAK,EAAE,CAAC,KAAK,EAAE,CAAC,MAAM,CAAC;YAChC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;SAAC,CAAC;KACrB;IACD;QACI,KAAK,EAAE,MAAM,EAAE,YAAY,EAAE,GAAG,EAAE,MAAM,EAAE,IAAI,CAAC,MAAM,CAAC;YAClD,CAAC,CAAC,KAAK,EAAE,CAAC,KAAK,EAAE,KAAK,EAAE,CAAC,MAAM,CAAC;YAChC,CAAC,CAAC,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,CAAC,MAAM,CAAC;YAC/B,CAAC,CAAC,KAAK,EAAE,CAAC,KAAK,EAAE,CAAC,KAAK,EAAE,MAAM,CAAC;YAChC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;SAAC,CAAC;KACrB;CACJ,CAAC;AAEF,MAAM,UAAU,wBAAwB,CAAC,MAAqB,EAAE,GAAa,EAAE,OAAe;IAA9F,iBAiCC;IAhCG,OAAO,MAAM,CAAC,eAAe,CAAC;;;;;0BACP,EAAH,WAAG;;;yBAAH,CAAA,iBAAG,CAAA;oBAAR,CAAC;oBACR,qBAAM,aAAa,CAAC,MAAM,EAAE,kDAA2C,CAAC,iBAAc,EAAE,OAAO,CAAC,EAAA;;oBAAhG,SAAgG,CAAC;;;oBADrF,IAAG,CAAA;;;oBAIb,KAAK,GAAG,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC,KAAK,CAAC;wBACjC,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC;4BAC3B,cAAc,EAAE,EAAE,CAAC,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC,EAAE,CAAC,MAAM,CAAC,YAAY,CAAC,cAAc,CAAC,aAAa,EAAE,EAAE,OAAO,CAAC,CAAC;4BAChG,UAAU,EAAE,EAAE,CAAC,MAAM,CAAC,YAAY,CAAC,cAAc,CAAC,UAAU,EAAE;yBACjE,CAAC;qBACL,CAAC,CAAC;oBAEG,IAAI,GAAG,EAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,QAAQ,CAAC;wBACrC,CAAC,EAAE,EAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,mBAAmB,CAAC;4BACtC,CAAC,EAAE,KAAK;4BACR,MAAM,EAAE,CAAC;yBACZ,CAAC;wBACF,EAAE,EAAE,KAAK;qBACZ,CAAC,CAAC;oBAEG,KAAK,GAAG,OAAO,CAAqB,KAAK,CAAC,CAAC;oBAC3C,EAAE,GAAG,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,SAAS,CAAC,OAAO,CAAC,UAAU,CAAC;oBAC5D,UAAU,GAAG,EAAE,CAAC,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,kBAAkB,CAAC,sBAAsB,CAAC,KAAK,CAAC,IAAI,YAAY,CAAC,CAAC,CAAC,IAAI,CAAC,GAAI,CAAC,IAAI,CAAC,CAAC,CAAC,EAApF,CAAoF,CAAC,CAAC;oBAE/G,UAAU,GAAG,SAAS,CAAC,UAAU,CAAC,CAAC;oBAEzC,qBAAM,UAAU,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,EAAE,KAAK,EAAE,IAAI,CAAC,EAAA;;oBAAjD,SAAiD,CAAC;oBACzC,CAAC,GAAG,CAAC;;;yBAAE,CAAA,CAAC,GAAG,UAAU,CAAC,MAAM,CAAA;oBACjC,qBAAM,SAAS,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,EAAE,UAAU,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,UAAU,CAAC,EAAA;;oBAAjE,SAAiE,CAAC;oBAClE,qBAAM,UAAU,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,EAAE,KAAK,EAAE,IAAI,CAAC,EAAA;;oBAAjD,SAAiD,CAAC;;;oBAFf,CAAC,EAAE,CAAA;;;;;SAI7C,CAAC,CAAC;AACP,CAAC;AAED,SAAe,UAAU,CAAC,MAAqB,EAAE,CAAyC,EAAE,KAAiB,EAAE,IAAgB;;;;;wBAC5G,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,gCAAgC,CAAC,CAAC,EAAE,KAAK,EAAE,OAAO,CAAC,EAAA;;oBAA5F,MAAM,GAAG,SAAmF;yBAC9F,MAAM,EAAN,wBAAM;oBAAE,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,cAAc,CAAC,iBAAiB,CAAC,MAAM,EAAE,EAAE,IAAI,EAAE,gBAAgB,EAAE,KAAK,EAAE,cAAc,EAAE,CAAC,EAAA;;oBAA3H,SAA2H,CAAC;;wBAE3H,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,gCAAgC,CAAC,CAAC,EAAE,IAAI,EAAE,MAAM,CAAC,EAAA;;oBAAxF,IAAI,GAAG,SAAiF;yBAC1F,IAAI,EAAJ,wBAAI;oBAAE,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,cAAc,CAAC,iBAAiB,CAAC,IAAI,EAAE,EAAE,IAAI,EAAE,gBAAgB,EAAE,KAAK,EAAE,SAAS,EAAE,IAAI,EAAE,SAAS,EAAE,UAAU,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,EAAE,CAAC,EAAA;;oBAAlK,SAAkK,CAAC;;;;;;CAChL;AAED,SAAe,aAAa,CAAC,MAAqB,EAAE,GAAW,EAAE,MAA+B,EAAE,UAAmB;;;;;wBACpG,qBAAM,MAAM,CAAC,QAAQ,CAAC,IAAI,CAAC,QAAQ,CAAC,EAAE,GAAG,EAAE,KAAK,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE,CAAC,EAAA;;oBAAnE,IAAI,GAAG,SAA4D;oBACtD,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,eAAe,CAAC,IAAI,EAAE,MAAM,CAAC,EAAA;;oBAA1E,UAAU,GAAG,SAA6D;oBAClE,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,WAAW,CAAC,UAAU,CAAC,EAAA;;oBAA/D,KAAK,GAAG,SAAuD;oBACnD,qBAAM,MAAM,CAAC,QAAQ,CAAC,SAAS,CAAC,eAAe,CAAC,KAAK,EAAE,UAAU,CAAC,CAAC,CAAC,EAAE,IAAI,EAAE,UAAU,EAAE,MAAM,EAAE,EAAE,EAAE,EAAE,UAAU,EAAE,EAAE,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,EAAA;;oBAA1I,SAAS,GAAG,SAA8H;oBAEhJ,sBAAO,EAAE,IAAI,MAAA,EAAE,UAAU,YAAA,EAAE,KAAK,OAAA,EAAE,SAAS,WAAA,EAAE,EAAC;;;;CACjD;AAED,SAAS,cAAc,CAAC,YAAoB;IACxC,OAAO,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC;QAClC,YAAY,EAAE,EAAE,CAAC,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC,EAAE,CAAC,MAAM,CAAC,YAAY,CAAC,cAAc,CAAC,YAAY,EAAE,EAAE,YAAY,CAAC,CAAC;KACrG,CAAC,CAAC;AACP,CAAC;AAED,SAAS,SAAS,CAAC,MAAqB,EAAE,CAAyC,EAAE,MAAY;IAC7F,IAAM,CAAC,GAAG,MAAM,CAAC,KAAK,CAAC,IAAI,CAAC,KAAK,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;SACpC,MAAM,CAAC,eAAe,CAAC,KAAK,CAAC,8BAA8B,EAAE,EAAE,SAAS,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,MAAM,EAAE,EAAE,IAAI,EAAE,MAAM,EAAE,SAAS,EAAE,KAAK,EAAE,EAAE,EAAE,CAAC,CAAC;IACjJ,OAAO,MAAM,CAAC,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC,CAAC;AAC3D,CAAC"}
|
|
@@ -28,8 +28,8 @@ export function createMapping(allData) {
|
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|
28
28
|
function writeDomain(enc, domain) {
|
|
29
29
|
if (!domain)
|
|
30
30
|
return;
|
|
31
|
-
enc.writeCategory({ name: "pdbx_"
|
|
32
|
-
enc.writeCategory({ name: "pdbx_"
|
|
31
|
+
enc.writeCategory({ name: "pdbx_".concat(domain.name, "_domain_annotation"), instance: function () { return CifWriter.Category.ofTable(domain.domains); } });
|
|
32
|
+
enc.writeCategory({ name: "pdbx_".concat(domain.name, "_domain_mapping"), instance: function () { return CifWriter.Category.ofTable(domain.mappings); } });
|
|
33
33
|
}
|
|
34
34
|
function getSources(data) {
|
|
35
35
|
var rows = [];
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|
@@ -1 +1 @@
|
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|
1
|
-
{"version":3,"file":"mapping.js","sourceRoot":"","sources":["../../../src/examples/domain-annotation-server/mapping.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,KAAK,EAAE,MAAM,mBAAmB,CAAC;AAC1C,OAAO,EAAE,SAAS,EAAE,MAAM,yBAAyB,CAAC;AACpD,OAAO,KAAK,CAAC,MAAM,WAAW,CAAC;AAC/B,wDAAwD;AAExD,MAAM,UAAU,aAAa,CAAC,OAAY;IACtC,IAAM,IAAI,GAAG,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;IAClC,IAAM,GAAG,GAAG,SAAS,CAAC,aAAa,EAAE,CAAC;IACtC,GAAG,CAAC,cAAc,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IAE5B,IAAI,CAAC,IAAI,CAAC,MAAM;QAAE,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;IAEvC,IAAM,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IAE9B,IAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAC;IACjC,IAAI,CAAC,OAAO,CAAC,SAAS;QAAE,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;IAE7C,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,gCAAgC,EAAE,QAAQ,EAAE,cAAM,OAAA,SAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,OAAO,CAAC,EAAnC,CAAmC,EAAE,CAAC,CAAC;IAEnH,KAAkB,UAAyB,EAAzB,KAAA,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,UAAU,CAAC,EAAzB,cAAyB,EAAzB,IAAyB,EAAE;QAAxC,IAAM,GAAG,SAAA;QACV,WAAW,CAAC,GAAG,EAAE,SAAS,CAAC,GAAG,EAAG,CAAC,CAAC,UAAkB,CAAC,GAAG,CAAC,EAAE,IAAI,CAAC,CAAC,CAAC;KACtE;IACD,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;AACzB,CAAC;AASD,SAAS,WAAW,CAAC,GAAsB,EAAE,MAAoC;IAC7E,IAAI,CAAC,MAAM;QAAE,OAAO;IACpB,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,
|
|
1
|
+
{"version":3,"file":"mapping.js","sourceRoot":"","sources":["../../../src/examples/domain-annotation-server/mapping.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,EAAE,KAAK,EAAE,MAAM,mBAAmB,CAAC;AAC1C,OAAO,EAAE,SAAS,EAAE,MAAM,yBAAyB,CAAC;AACpD,OAAO,KAAK,CAAC,MAAM,WAAW,CAAC;AAC/B,wDAAwD;AAExD,MAAM,UAAU,aAAa,CAAC,OAAY;IACtC,IAAM,IAAI,GAAG,MAAM,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;IAClC,IAAM,GAAG,GAAG,SAAS,CAAC,aAAa,EAAE,CAAC;IACtC,GAAG,CAAC,cAAc,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IAE5B,IAAI,CAAC,IAAI,CAAC,MAAM;QAAE,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;IAEvC,IAAM,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC;IAE9B,IAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAC;IACjC,IAAI,CAAC,OAAO,CAAC,SAAS;QAAE,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;IAE7C,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,gCAAgC,EAAE,QAAQ,EAAE,cAAM,OAAA,SAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,OAAO,CAAC,EAAnC,CAAmC,EAAE,CAAC,CAAC;IAEnH,KAAkB,UAAyB,EAAzB,KAAA,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,UAAU,CAAC,EAAzB,cAAyB,EAAzB,IAAyB,EAAE;QAAxC,IAAM,GAAG,SAAA;QACV,WAAW,CAAC,GAAG,EAAE,SAAS,CAAC,GAAG,EAAG,CAAC,CAAC,UAAkB,CAAC,GAAG,CAAC,EAAE,IAAI,CAAC,CAAC,CAAC;KACtE;IACD,OAAO,GAAG,CAAC,OAAO,EAAE,CAAC;AACzB,CAAC;AASD,SAAS,WAAW,CAAC,GAAsB,EAAE,MAAoC;IAC7E,IAAI,CAAC,MAAM;QAAE,OAAO;IACpB,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,eAAQ,MAAM,CAAC,IAAI,uBAAoB,EAAE,QAAQ,EAAE,cAAM,OAAA,SAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,CAAC,EAA1C,CAA0C,EAAE,CAAC,CAAC;IACjI,GAAG,CAAC,aAAa,CAAC,EAAE,IAAI,EAAE,eAAQ,MAAM,CAAC,IAAI,oBAAiB,EAAE,QAAQ,EAAE,cAAM,OAAA,SAAS,CAAC,QAAQ,CAAC,OAAO,CAAC,MAAM,CAAC,QAAQ,CAAC,EAA3C,CAA2C,EAAE,CAAC,CAAC;AACnI,CAAC;AAED,SAAS,UAAU,CAAC,IAAS;IACzB,IAAM,IAAI,GAA2B,EAAE,CAAC;IACxC,KAAmB,UAAyB,EAAzB,KAAA,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,UAAU,CAAC,EAAzB,cAAyB,EAAzB,IAAyB,EAAE;QAAzC,IAAM,MAAI,SAAA;QACX,IAAI,CAAC,IAAI,CAAC,MAAI,CAAC;YAAE,SAAS;QAC1B,IAAM,GAAG,GAAyB,EAAE,EAAE,EAAE,MAAI,EAAE,KAAK,EAAE,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,MAAI,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC;QACtF,IAAI,GAAG,CAAC,KAAK,GAAG,CAAC;YAAE,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;KACrC;IACD,OAAO,KAAK,CAAC,MAAM,CAAC,CAAC,CAAC,OAAO,EAAE,IAAI,CAAC,CAAC;AACzC,CAAC;AAED,SAAS,WAAW,CAAC,OAAe,EAAE,QAAgB,EAAE,QAAa;IACjE,IAAM,IAAI,GAAiB,EAAE,CAAC;IAE9B,IAAM,CAAC,GAAG,UAAC,CAAM,IAAK,OAAA,CAAC,KAAK,IAAI,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,EAAvB,CAAuB,CAAC;IAE9C,KAAoB,UAAQ,EAAR,qBAAQ,EAAR,sBAAQ,EAAR,IAAQ,EAAE;QAAzB,IAAM,KAAK,iBAAA;QACZ,IAAI,KAAK,CAAC,KAAK,IAAI,KAAK,CAAC,GAAG,EAAE;YAC1B,IAAI,CAAC,IAAI,CAAC;gBACN,EAAE,EAAE,OAAO,EAAE;gBACb,QAAQ,UAAA;gBACR,eAAe,EAAE,EAAE,GAAG,KAAK,CAAC,SAAS;gBACrC,aAAa,EAAE,KAAK,CAAC,cAAc;gBACnC,YAAY,EAAE,KAAK,CAAC,QAAQ;gBAC5B,gBAAgB,EAAE,CAAC,CAAC,KAAK,CAAC,KAAK,CAAC,cAAc,CAAC;gBAC/C,eAAe,EAAE,CAAC,CAAC,KAAK,CAAC,KAAK,CAAC,qBAAqB,CAAC;gBACrD,qBAAqB,EAAE,KAAK,CAAC,KAAK,CAAC,qBAAqB;gBACxD,gBAAgB,EAAE,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,cAAc,CAAC;gBAC7C,eAAe,EAAE,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,qBAAqB,CAAC;gBACnD,qBAAqB,EAAE,KAAK,CAAC,GAAG,CAAC,qBAAqB;aACzD,CAAC,CAAC;SACN;aAAM;YACH,IAAI,CAAC,IAAI,CAAC;gBACN,EAAE,EAAE,OAAO,EAAE;gBACb,QAAQ,UAAA;gBACR,eAAe,EAAE,EAAE,GAAG,KAAK,CAAC,SAAS;gBACrC,aAAa,EAAE,KAAK,CAAC,cAAc;gBACnC,YAAY,EAAE,KAAK,CAAC,QAAQ;aACxB,CAAC,CAAC;SACb;KACJ;IACD,OAAO,IAAI,CAAC;AAChB,CAAC;AAED,SAAS,aAAa,CAAC,EAAU,EAAE,gBAAwB,EAAE,IAAS,EAAE,MAAW;IAC/E,IAAM,KAAK,GAAG,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;IAClC,KAAgB,UAAmB,EAAnB,KAAA,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,EAAnB,cAAmB,EAAnB,IAAmB;QAA9B,IAAM,CAAC,SAAA;QAAyB,KAAK,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC;KAAA;IACxD,kBAAS,EAAE,IAAA,EAAE,gBAAgB,kBAAA,EAAE,UAAU,EAAE,IAAI,CAAC,UAAU,IAAK,KAAK,EAAG;AAC3E,CAAC;AAED,SAAS,SAAS,CAAC,IAAY,EAAE,MAAW,EAAE,OAAY;IACtD,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC;QAAE,OAAO,KAAK,CAAC,CAAC;IAElC,IAAM,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC;IAE3B,IAAM,OAAO,GAAU,EAAE,CAAC;IAC1B,IAAM,QAAQ,GAAiB,EAAE,CAAC;IAElC,IAAI,eAAe,GAAG,CAAC,EAAE,gBAAgB,GAAG,CAAC,CAAC;IAE9C,KAAiB,UAAiB,EAAjB,KAAA,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,EAAjB,cAAiB,EAAjB,IAAiB,EAAE;QAA/B,IAAM,EAAE,SAAA;QACT,IAAM,MAAM,GAAG,IAAI,CAAC,EAAE,CAAC,CAAC;QACxB,OAAO,CAAC,IAAI,CAAC,aAAa,CAAC,EAAE,EAAE,gBAAgB,EAAE,MAAM,EAAE,MAAM,CAAC,CAAC,CAAC;QAClE,QAAQ,CAAC,IAAI,OAAb,QAAQ,EAAS,WAAW,CAAC,eAAe,EAAE,gBAAgB,EAAE,MAAM,CAAC,QAAQ,CAAC,EAAE;QAClF,eAAe,GAAG,QAAQ,CAAC,MAAM,GAAG,CAAC,CAAC;QACtC,gBAAgB,EAAE,CAAC;KACtB;IAED,OAAO,OAAO,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC;QACxB,IAAI,MAAA;QACJ,OAAO,EAAE,KAAK,CAAC,MAAM,uBAAM,CAAC,CAAC,IAAI,GAAK,MAAM,GAAI,OAAO,CAAC;QACxD,QAAQ,EAAE,KAAK,CAAC,MAAM,CAAY,CAAC,CAAC,OAAO,EAAE,QAAQ,CAAC;KACzD,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC;AACf,CAAC"}
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@@ -12,7 +12,7 @@ function getMappings(id) {
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12
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var data, json;
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13
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return __generator(this, function (_a) {
|
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14
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switch (_a.label) {
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15
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-
case 0: return [4 /*yield*/, fetch("https://www.ebi.ac.uk/pdbe/api/mappings/"
|
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15
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+
case 0: return [4 /*yield*/, fetch("https://www.ebi.ac.uk/pdbe/api/mappings/".concat(id))];
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case 1:
|
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17
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data = _a.sent();
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18
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return [4 /*yield*/, data.json()];
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@@ -27,7 +27,7 @@ function getMappings(id) {
|
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|
27
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|
var PORT = process.env.port || 1338;
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|
var app = express();
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29
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|
var PREFIX = '/';
|
|
30
|
-
app.get(PREFIX
|
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+
app.get("".concat(PREFIX, "/:id"), function (req, res) { return __awaiter(void 0, void 0, void 0, function () {
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var mapping, _a;
|
|
32
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|
return __generator(this, function (_b) {
|
|
33
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|
switch (_b.label) {
|
|
@@ -54,7 +54,7 @@ app.get(PREFIX + "/:id", function (req, res) { return __awaiter(void 0, void 0,
|
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|
54
54
|
}
|
|
55
55
|
});
|
|
56
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|
}); });
|
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-
app.get(""
|
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57
|
+
app.get("".concat(PREFIX), function (req, res) {
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|
res.writeHead(200, { 'Content-Type': 'text/plain; charset=utf-8' });
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|
res.end('Usage: /pdb_id, e.g. /1tqn');
|
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60
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|
});
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"server.js","sourceRoot":"","sources":["../../../src/examples/domain-annotation-server/server.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,OAAO,MAAM,SAAS,CAAC;AAC9B,OAAO,KAAK,MAAM,YAAY,CAAC;AAC/B,OAAO,EAAE,aAAa,EAAE,MAAM,WAAW,CAAC;AAE1C,SAAe,WAAW,CAAC,EAAU;;;;;wBACpB,qBAAM,KAAK,CAAC,
|
|
1
|
+
{"version":3,"file":"server.js","sourceRoot":"","sources":["../../../src/examples/domain-annotation-server/server.ts"],"names":[],"mappings":"AAAA;;;;GAIG;;AAEH,OAAO,OAAO,MAAM,SAAS,CAAC;AAC9B,OAAO,KAAK,MAAM,YAAY,CAAC;AAC/B,OAAO,EAAE,aAAa,EAAE,MAAM,WAAW,CAAC;AAE1C,SAAe,WAAW,CAAC,EAAU;;;;;wBACpB,qBAAM,KAAK,CAAC,kDAA2C,EAAE,CAAE,CAAC,EAAA;;oBAAnE,IAAI,GAAG,SAA4D;oBAC5D,qBAAM,IAAI,CAAC,IAAI,EAAE,EAAA;;oBAAxB,IAAI,GAAG,SAAiB;oBAC9B,sBAAO,aAAa,CAAC,IAAI,CAAC,EAAC;;;;CAC9B;AAAA,CAAC;AAGF,IAAM,IAAI,GAAG,OAAO,CAAC,GAAG,CAAC,IAAI,IAAI,IAAI,CAAC;AAEtC,IAAM,GAAG,GAAG,OAAO,EAAE,CAAC;AAEtB,IAAM,MAAM,GAAG,GAAG,CAAC;AAEnB,GAAG,CAAC,GAAG,CAAC,UAAG,MAAM,SAAM,EAAE,UAAO,GAAG,EAAE,GAAG;;;;;;gBAEhC,OAAO,CAAC,GAAG,CAAC,aAAa,GAAG,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;gBAC3B,qBAAM,WAAW,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,EAAA;;gBAA1C,OAAO,GAAG,SAAgC;gBAChD,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE;oBACf,cAAc,EAAE,2BAA2B;oBAC3C,6BAA6B,EAAE,GAAG;oBAClC,8BAA8B,EAAE,kBAAkB;iBACrD,CAAC,CAAC;gBACH,GAAG,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;;;;gBAEjB,OAAO,CAAC,GAAG,CAAC,SAAS,GAAG,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;gBACvC,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE,EAAE,6BAA6B,EAAE,GAAG,EAAE,8BAA8B,EAAE,kBAAkB,EAAE,CAAC,CAAC;gBAC/G,GAAG,CAAC,GAAG,EAAE,CAAC;;;;;KAEjB,CAAC,CAAC;AAEH,GAAG,CAAC,GAAG,CAAC,UAAG,MAAM,CAAE,EAAE,UAAC,GAAG,EAAE,GAAG;IAC1B,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE,EAAE,cAAc,EAAE,2BAA2B,EAAE,CAAC,CAAC;IACpE,GAAG,CAAC,GAAG,CAAC,4BAA4B,CAAC,CAAC;AAC1C,CAAC,CAAC,CAAC;AAEH,GAAG,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;AAEjB,OAAO,CAAC,GAAG,CAAC,kBAAkB,GAAG,IAAI,CAAC,CAAC"}
|