search_biomodel 0.1.2 → 1.0.0

Sign up to get free protection for your applications and to get access to all the features.
Files changed (1059) hide show
  1. data/Gemfile +1 -2
  2. data/Gemfile.lock +17 -3
  3. data/README.rdoc +9 -2
  4. data/VERSION +1 -1
  5. data/lib/search_biomodel.rb +11 -8
  6. data/search_biomodel.gemspec +1055 -9
  7. data/search_biomodel/ruby/1.8/bin/jeweler +19 -0
  8. data/search_biomodel/ruby/1.8/bin/nokogiri +19 -0
  9. data/search_biomodel/ruby/1.8/bin/rackup +19 -0
  10. data/search_biomodel/ruby/1.8/bin/rake +19 -0
  11. data/search_biomodel/ruby/1.8/bin/rcov +19 -0
  12. data/search_biomodel/ruby/1.8/cache/builder-3.0.0.gem +0 -0
  13. data/search_biomodel/ruby/1.8/cache/git-1.2.5.gem +0 -0
  14. data/search_biomodel/ruby/1.8/cache/gyoku-0.4.4.gem +0 -0
  15. data/search_biomodel/ruby/1.8/cache/httpi-0.9.4.gem +0 -0
  16. data/search_biomodel/ruby/1.8/cache/jeweler-1.6.2.gem +0 -0
  17. data/search_biomodel/ruby/1.8/cache/nokogiri-1.4.6.gem +0 -0
  18. data/search_biomodel/ruby/1.8/cache/nori-1.0.1.gem +0 -0
  19. data/search_biomodel/ruby/1.8/cache/pyu-ntlm-http-0.1.3.1.gem +0 -0
  20. data/search_biomodel/ruby/1.8/cache/rack-1.3.0.gem +0 -0
  21. data/search_biomodel/ruby/1.8/cache/rake-0.9.2.gem +0 -0
  22. data/search_biomodel/ruby/1.8/cache/rcov-0.9.9.gem +0 -0
  23. data/search_biomodel/ruby/1.8/cache/savon-0.9.2.gem +0 -0
  24. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/CHANGES +89 -0
  25. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/README +229 -0
  26. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/README.rdoc +232 -0
  27. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/Rakefile +296 -0
  28. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/TAGS +55364 -0
  29. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/blankslate.rb +109 -0
  30. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder.rb +13 -0
  31. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/blankslate.rb +23 -0
  32. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/xchar.rb +197 -0
  33. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/xmlbase.rb +160 -0
  34. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/xmlevents.rb +63 -0
  35. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/xmlmarkup.rb +334 -0
  36. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/performance.rb +40 -0
  37. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/preload.rb +39 -0
  38. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_blankslate.rb +225 -0
  39. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_cssbuilder.rb +125 -0
  40. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_eventbuilder.rb +150 -0
  41. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_markupbuilder.rb +546 -0
  42. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_namecollision.rb +39 -0
  43. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_xchar.rb +77 -0
  44. data/search_biomodel/ruby/1.8/gems/git-1.2.5/README +240 -0
  45. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git.rb +156 -0
  46. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/author.rb +14 -0
  47. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/base.rb +479 -0
  48. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/branch.rb +104 -0
  49. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/branches.rb +48 -0
  50. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/diff.rb +146 -0
  51. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/index.rb +5 -0
  52. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/lib.rb +719 -0
  53. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/log.rb +117 -0
  54. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/object.rb +273 -0
  55. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/path.rb +27 -0
  56. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/remote.rb +40 -0
  57. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/repository.rb +4 -0
  58. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/stash.rb +27 -0
  59. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/stashes.rb +44 -0
  60. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/status.rb +110 -0
  61. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/working_directory.rb +4 -0
  62. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/.gemtest +0 -0
  63. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/.gitignore +9 -0
  64. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/.rspec +1 -0
  65. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/.travis.yml +7 -0
  66. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/CHANGELOG.md +55 -0
  67. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/Gemfile +2 -0
  68. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/LICENSE +20 -0
  69. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/README.md +81 -0
  70. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/Rakefile +11 -0
  71. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/gyoku.gemspec +26 -0
  72. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku.rb +23 -0
  73. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/array.rb +45 -0
  74. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/core_ext/string.rb +19 -0
  75. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/hash.rb +55 -0
  76. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/version.rb +5 -0
  77. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/xml_key.rb +63 -0
  78. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/xml_value.rb +28 -0
  79. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/array_spec.rb +53 -0
  80. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/core_ext/string_spec.rb +17 -0
  81. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/hash_spec.rb +160 -0
  82. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/xml_key_spec.rb +77 -0
  83. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/xml_value_spec.rb +49 -0
  84. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku_spec.rb +46 -0
  85. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/spec_helper.rb +2 -0
  86. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/.autotest +5 -0
  87. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/.gemtest +0 -0
  88. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/.gitignore +9 -0
  89. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/.rspec +1 -0
  90. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/.travis.yml +7 -0
  91. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/CHANGELOG.md +60 -0
  92. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/Gemfile +8 -0
  93. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/LICENSE +20 -0
  94. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/README.md +223 -0
  95. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/Rakefile +18 -0
  96. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/autotest/discover.rb +1 -0
  97. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/httpi.gemspec +28 -0
  98. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi.rb +198 -0
  99. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/adapter.rb +67 -0
  100. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/adapter/curb.rb +125 -0
  101. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/adapter/httpclient.rb +98 -0
  102. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/adapter/net_http.rb +117 -0
  103. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/auth/config.rb +81 -0
  104. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/auth/ssl.rb +91 -0
  105. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/dime.rb +56 -0
  106. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/request.rb +90 -0
  107. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/response.rb +85 -0
  108. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/version.rb +5 -0
  109. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/attachment.gif +0 -0
  110. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/client_cert.pem +16 -0
  111. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/client_key.pem +15 -0
  112. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/xml.gz +0 -0
  113. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/xml.xml +10 -0
  114. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/xml_dime.dime +0 -0
  115. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/xml_dime.xml +1 -0
  116. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/adapter/curb_spec.rb +232 -0
  117. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/adapter/httpclient_spec.rb +164 -0
  118. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/adapter/net_http_spec.rb +142 -0
  119. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/adapter_spec.rb +55 -0
  120. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/auth/config_spec.rb +117 -0
  121. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/auth/ssl_spec.rb +128 -0
  122. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/httpi_spec.rb +284 -0
  123. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/request_spec.rb +135 -0
  124. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/response_spec.rb +125 -0
  125. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/integration/request_spec.rb +95 -0
  126. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/integration/server.rb +39 -0
  127. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/spec_helper.rb +12 -0
  128. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/support/fixture.rb +27 -0
  129. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/support/matchers.rb +19 -0
  130. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/.document +8 -0
  131. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/ChangeLog.markdown +166 -0
  132. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/Gemfile +22 -0
  133. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/Gemfile.lock +59 -0
  134. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/LICENSE.txt +20 -0
  135. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/README.markdown +216 -0
  136. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/Rakefile +81 -0
  137. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/bin/jeweler +5 -0
  138. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/cucumber.feature +103 -0
  139. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/directory_layout.feature +86 -0
  140. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/dotdocument.feature +13 -0
  141. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/env_options.feature +9 -0
  142. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/gemfile.feature +71 -0
  143. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/git.feature +102 -0
  144. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/license.feature +20 -0
  145. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/rakefile.feature +158 -0
  146. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/readme.feature +12 -0
  147. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/test.feature +54 -0
  148. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/test_helper.feature +149 -0
  149. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/placeholder.feature +5 -0
  150. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/step_definitions/debug_steps.rb +6 -0
  151. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/step_definitions/filesystem_steps.rb +70 -0
  152. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/step_definitions/generator_steps.rb +382 -0
  153. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/step_definitions/task_steps.rb +6 -0
  154. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/support/env.rb +42 -0
  155. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/tasks/build_gem.feature +9 -0
  156. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/tasks/version.feature +31 -0
  157. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/tasks/version_bumping.feature +49 -0
  158. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/jeweler.gemspec +244 -0
  159. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler.rb +177 -0
  160. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands.rb +20 -0
  161. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/build_gem.rb +36 -0
  162. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/check_dependencies.rb +50 -0
  163. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/install_gem.rb +31 -0
  164. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/release_gemspec.rb +82 -0
  165. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/release_to_git.rb +59 -0
  166. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/release_to_rubygems.rb +28 -0
  167. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/validate_gemspec.rb +30 -0
  168. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/version/base.rb +55 -0
  169. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/version/bump_major.rb +13 -0
  170. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/version/bump_minor.rb +12 -0
  171. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/version/bump_patch.rb +14 -0
  172. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/version/write.rb +12 -0
  173. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/write_gemspec.rb +39 -0
  174. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/errors.rb +8 -0
  175. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/gemcutter_tasks.rb +8 -0
  176. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/gemspec_helper.rb +87 -0
  177. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator.rb +287 -0
  178. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/application.rb +61 -0
  179. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/bacon_mixin.rb +43 -0
  180. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/github_mixin.rb +29 -0
  181. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/micronaut_mixin.rb +41 -0
  182. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/minitest_mixin.rb +42 -0
  183. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/options.rb +162 -0
  184. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/rdoc_mixin.rb +9 -0
  185. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/riot_mixin.rb +42 -0
  186. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/rspec_mixin.rb +42 -0
  187. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/shindo_mixin.rb +44 -0
  188. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/shoulda_mixin.rb +42 -0
  189. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/testspec_mixin.rb +42 -0
  190. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/testunit_mixin.rb +39 -0
  191. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/yard_mixin.rb +14 -0
  192. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/rubyforge_tasks.rb +95 -0
  193. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/rubygems_dot_org_tasks.rb +38 -0
  194. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/rubygems_tasks.rb +38 -0
  195. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/specification.rb +110 -0
  196. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/tasks.rb +224 -0
  197. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/.document +5 -0
  198. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/.gitignore +48 -0
  199. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/Gemfile +12 -0
  200. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/LICENSE.txt +20 -0
  201. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/README.rdoc +19 -0
  202. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/Rakefile +9 -0
  203. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/bacon/flunking.rb +7 -0
  204. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/bacon/helper.rb +9 -0
  205. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/bundler_setup.erb +10 -0
  206. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/features/default.feature +9 -0
  207. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/features/support/env.rb +10 -0
  208. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/jeweler_tasks.erb +31 -0
  209. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/micronaut/flunking.rb +7 -0
  210. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/micronaut/helper.rb +18 -0
  211. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/minitest/flunking.rb +7 -0
  212. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/minitest/helper.rb +12 -0
  213. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/other_tasks.erb +86 -0
  214. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/riot/flunking.rb +11 -0
  215. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/riot/helper.rb +4 -0
  216. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/rspec/.rspec +1 -0
  217. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/rspec/flunking.rb +7 -0
  218. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/rspec/helper.rb +12 -0
  219. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/shindo/flunking.rb +8 -0
  220. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/shindo/helper.rb +6 -0
  221. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/shoulda/flunking.rb +7 -0
  222. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/shoulda/helper.rb +11 -0
  223. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/testspec/flunking.rb +7 -0
  224. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/testspec/helper.rb +7 -0
  225. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/testunit/flunking.rb +7 -0
  226. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/testunit/helper.rb +10 -0
  227. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/version.rb +10 -0
  228. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/version_helper.rb +141 -0
  229. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/bar/VERSION.yml +4 -0
  230. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/bar/bin/foo_the_ultimate_bin +1 -0
  231. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/bar/hey_include_me_in_gemspec +0 -0
  232. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/bar/lib/foo_the_ultimate_lib.rb +1 -0
  233. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-constant/.document +5 -0
  234. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-constant/.gitignore +5 -0
  235. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-constant/LICENSE.txt +20 -0
  236. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-constant/README.rdoc +7 -0
  237. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-constant/Rakefile +85 -0
  238. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-constant/existing-project-with-version.gemspec +29 -0
  239. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-constant/lib/existing_project_with_version.rb +0 -0
  240. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-constant/test/existing_project_with_version_test.rb +7 -0
  241. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-constant/test/test_helper.rb +10 -0
  242. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-plaintext/.document +5 -0
  243. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-plaintext/.gitignore +5 -0
  244. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-plaintext/LICENSE.txt +20 -0
  245. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-plaintext/README.rdoc +7 -0
  246. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-plaintext/Rakefile +84 -0
  247. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-plaintext/VERSION +1 -0
  248. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-plaintext/existing-project-with-version.gemspec +29 -0
  249. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-plaintext/lib/existing_project_with_version.rb +0 -0
  250. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-plaintext/test/existing_project_with_version_test.rb +7 -0
  251. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-plaintext/test/test_helper.rb +10 -0
  252. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-yaml/.document +5 -0
  253. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-yaml/.gitignore +5 -0
  254. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-yaml/LICENSE.txt +20 -0
  255. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-yaml/README.rdoc +7 -0
  256. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-yaml/Rakefile +84 -0
  257. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-yaml/VERSION.yml +4 -0
  258. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-yaml/bin/foo_the_ultimate_bin +0 -0
  259. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-yaml/existing-project-with-version.gemspec +29 -0
  260. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-yaml/lib/existing_project_with_version.rb +0 -0
  261. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-yaml/test/existing_project_with_version_test.rb +7 -0
  262. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/fixtures/existing-project-with-version-yaml/test/test_helper.rb +10 -0
  263. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/geminstaller.yml +12 -0
  264. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/commands/test_build_gem.rb +103 -0
  265. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/commands/test_install_gem.rb +35 -0
  266. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/commands/test_release_to_gemcutter.rb +39 -0
  267. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/commands/test_release_to_git.rb +208 -0
  268. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/commands/test_release_to_github.rb +406 -0
  269. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/commands/test_validate_gemspec.rb +27 -0
  270. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/commands/test_write_gemspec.rb +101 -0
  271. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/commands/version/test_base.rb +32 -0
  272. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/commands/version/test_bump_major.rb +22 -0
  273. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/commands/version/test_bump_minor.rb +19 -0
  274. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/commands/version/test_bump_patch.rb +20 -0
  275. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/commands/version/test_write.rb +22 -0
  276. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/generator/test_application.rb +120 -0
  277. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/generator/test_options.rb +225 -0
  278. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/test_gemspec_helper.rb +44 -0
  279. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/test_generator.rb +127 -0
  280. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/test_generator_initialization.rb +164 -0
  281. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/test_generator_mixins.rb +23 -0
  282. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/test_specification.rb +237 -0
  283. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/test_tasks.rb +50 -0
  284. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/jeweler/test_version_helper.rb +214 -0
  285. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/shoulda_macros/jeweler_macros.rb +35 -0
  286. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/test_helper.rb +178 -0
  287. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/test/test_jeweler.rb +175 -0
  288. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/.autotest +26 -0
  289. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/.gemtest +0 -0
  290. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/CHANGELOG.ja.rdoc +480 -0
  291. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/CHANGELOG.rdoc +475 -0
  292. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/Manifest.txt +283 -0
  293. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/README.ja.rdoc +102 -0
  294. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/README.rdoc +146 -0
  295. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/Rakefile +191 -0
  296. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/bin/nokogiri +54 -0
  297. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/Makefile +515 -0
  298. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/depend +358 -0
  299. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/extconf.rb +118 -0
  300. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/html_document.c +154 -0
  301. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/html_document.h +10 -0
  302. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/html_document.o +0 -0
  303. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/html_element_description.c +276 -0
  304. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/html_element_description.h +10 -0
  305. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/html_element_description.o +0 -0
  306. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/html_entity_lookup.c +32 -0
  307. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/html_entity_lookup.h +8 -0
  308. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/html_entity_lookup.o +0 -0
  309. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/html_sax_parser_context.c +94 -0
  310. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/html_sax_parser_context.h +11 -0
  311. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/html_sax_parser_context.o +0 -0
  312. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/mkmf.log +278 -0
  313. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/nokogiri.c +97 -0
  314. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/nokogiri.h +162 -0
  315. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/nokogiri.o +0 -0
  316. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/nokogiri.so +0 -0
  317. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_attr.c +94 -0
  318. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_attr.h +9 -0
  319. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_attr.o +0 -0
  320. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_attribute_decl.c +70 -0
  321. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_attribute_decl.h +9 -0
  322. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_attribute_decl.o +0 -0
  323. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_cdata.c +56 -0
  324. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_cdata.h +9 -0
  325. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_cdata.o +0 -0
  326. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_comment.c +54 -0
  327. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_comment.h +9 -0
  328. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_comment.o +0 -0
  329. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_document.c +478 -0
  330. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_document.h +23 -0
  331. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_document.o +0 -0
  332. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_document_fragment.c +48 -0
  333. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_document_fragment.h +10 -0
  334. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_document_fragment.o +0 -0
  335. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_dtd.c +202 -0
  336. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_dtd.h +10 -0
  337. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_dtd.o +0 -0
  338. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_element_content.c +123 -0
  339. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_element_content.h +10 -0
  340. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_element_content.o +0 -0
  341. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_element_decl.c +69 -0
  342. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_element_decl.h +9 -0
  343. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_element_decl.o +0 -0
  344. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_encoding_handler.c +79 -0
  345. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_encoding_handler.h +8 -0
  346. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_encoding_handler.o +0 -0
  347. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_entity_decl.c +110 -0
  348. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_entity_decl.h +10 -0
  349. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_entity_decl.o +0 -0
  350. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_entity_reference.c +52 -0
  351. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_entity_reference.h +9 -0
  352. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_entity_reference.o +0 -0
  353. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_io.c +56 -0
  354. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_io.h +11 -0
  355. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_io.o +0 -0
  356. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_libxml2_hacks.c +112 -0
  357. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_libxml2_hacks.h +12 -0
  358. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_libxml2_hacks.o +0 -0
  359. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_namespace.c +84 -0
  360. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_namespace.h +13 -0
  361. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_namespace.o +0 -0
  362. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_node.c +1391 -0
  363. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_node.h +13 -0
  364. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_node.o +0 -0
  365. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_node_set.c +418 -0
  366. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_node_set.h +9 -0
  367. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_node_set.o +0 -0
  368. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_processing_instruction.c +56 -0
  369. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_processing_instruction.h +9 -0
  370. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_processing_instruction.o +0 -0
  371. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_reader.c +684 -0
  372. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_reader.h +10 -0
  373. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_reader.o +0 -0
  374. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_relax_ng.c +168 -0
  375. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_relax_ng.h +9 -0
  376. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_relax_ng.o +0 -0
  377. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_sax_parser.c +288 -0
  378. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_sax_parser.h +39 -0
  379. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_sax_parser.o +0 -0
  380. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_sax_parser_context.c +199 -0
  381. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_sax_parser_context.h +10 -0
  382. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_sax_parser_context.o +0 -0
  383. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_sax_push_parser.c +115 -0
  384. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_sax_push_parser.h +9 -0
  385. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_sax_push_parser.o +0 -0
  386. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_schema.c +205 -0
  387. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_schema.h +9 -0
  388. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_schema.o +0 -0
  389. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_syntax_error.c +58 -0
  390. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_syntax_error.h +13 -0
  391. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_syntax_error.o +0 -0
  392. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_text.c +50 -0
  393. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_text.h +9 -0
  394. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_text.o +0 -0
  395. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_xpath_context.c +309 -0
  396. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_xpath_context.h +9 -0
  397. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xml_xpath_context.o +0 -0
  398. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xslt_stylesheet.c +260 -0
  399. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xslt_stylesheet.h +9 -0
  400. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/ext/nokogiri/xslt_stylesheet.o +0 -0
  401. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri.rb +133 -0
  402. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/css.rb +28 -0
  403. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/css/node.rb +99 -0
  404. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/css/parser.rb +677 -0
  405. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/css/parser.y +237 -0
  406. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/css/parser_extras.rb +91 -0
  407. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/css/syntax_error.rb +7 -0
  408. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/css/tokenizer.rb +152 -0
  409. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/css/tokenizer.rex +55 -0
  410. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/css/xpath_visitor.rb +171 -0
  411. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/decorators/slop.rb +35 -0
  412. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/encoding_handler.rb +42 -0
  413. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/html/document.rb +28 -0
  414. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/html/element_description.rb +81 -0
  415. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/html/entity_lookup.rb +16 -0
  416. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/html/sax/parser_context.rb +38 -0
  417. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/io_callbacks.rb +42 -0
  418. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/libxml.rb +420 -0
  419. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/common_node.rb +38 -0
  420. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/html_elem_desc.rb +24 -0
  421. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/html_entity_desc.rb +13 -0
  422. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_alloc.rb +16 -0
  423. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_attr.rb +20 -0
  424. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_attribute.rb +27 -0
  425. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_buffer.rb +16 -0
  426. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_char_encoding_handler.rb +11 -0
  427. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_document.rb +117 -0
  428. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_dtd.rb +28 -0
  429. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_element.rb +26 -0
  430. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_element_content.rb +17 -0
  431. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_entity.rb +32 -0
  432. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_enumeration.rb +12 -0
  433. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_node.rb +28 -0
  434. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_node_set.rb +53 -0
  435. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_notation.rb +11 -0
  436. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_ns.rb +15 -0
  437. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_parser_context.rb +20 -0
  438. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_parser_input.rb +19 -0
  439. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_relax_ng.rb +14 -0
  440. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_sax_handler.rb +51 -0
  441. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_sax_push_parser_context.rb +124 -0
  442. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_schema.rb +13 -0
  443. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_syntax_error.rb +31 -0
  444. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_text_reader.rb +12 -0
  445. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_xpath_context.rb +38 -0
  446. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_xpath_object.rb +35 -0
  447. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xml_xpath_parser_context.rb +20 -0
  448. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/structs/xslt_stylesheet.rb +13 -0
  449. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/weak_bucket.rb +40 -0
  450. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/attr.rb +41 -0
  451. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/attribute_decl.rb +27 -0
  452. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/cdata.rb +19 -0
  453. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/comment.rb +18 -0
  454. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/document.rb +174 -0
  455. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/document_fragment.rb +21 -0
  456. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/dtd.rb +67 -0
  457. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/element_content.rb +43 -0
  458. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/element_decl.rb +19 -0
  459. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/entity_decl.rb +36 -0
  460. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/entity_reference.rb +19 -0
  461. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/namespace.rb +44 -0
  462. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/node.rb +559 -0
  463. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/node_set.rb +150 -0
  464. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/processing_instruction.rb +20 -0
  465. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/reader.rb +236 -0
  466. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/relax_ng.rb +85 -0
  467. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/sax/parser.rb +143 -0
  468. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/sax/parser_context.rb +79 -0
  469. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/sax/push_parser.rb +51 -0
  470. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/schema.rb +109 -0
  471. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/syntax_error.rb +98 -0
  472. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/text.rb +18 -0
  473. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/xpath.rb +9 -0
  474. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xml/xpath_context.rb +153 -0
  475. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/ffi/xslt/stylesheet.rb +77 -0
  476. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/html.rb +35 -0
  477. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/html/builder.rb +35 -0
  478. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/html/document.rb +209 -0
  479. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/html/document_fragment.rb +41 -0
  480. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/html/element_description.rb +23 -0
  481. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/html/entity_lookup.rb +13 -0
  482. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/html/sax/parser.rb +52 -0
  483. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/html/sax/parser_context.rb +16 -0
  484. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/nokogiri.so +0 -0
  485. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/syntax_error.rb +4 -0
  486. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/version.rb +43 -0
  487. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/version_warning.rb +14 -0
  488. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml.rb +67 -0
  489. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/attr.rb +14 -0
  490. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/attribute_decl.rb +18 -0
  491. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/builder.rb +418 -0
  492. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/cdata.rb +11 -0
  493. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/character_data.rb +7 -0
  494. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/document.rb +218 -0
  495. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/document_fragment.rb +84 -0
  496. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/dtd.rb +22 -0
  497. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/element_content.rb +36 -0
  498. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/element_decl.rb +13 -0
  499. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/entity_decl.rb +19 -0
  500. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/namespace.rb +13 -0
  501. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/node.rb +891 -0
  502. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/node/save_options.rb +52 -0
  503. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/node_set.rb +350 -0
  504. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/notation.rb +6 -0
  505. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/parse_options.rb +93 -0
  506. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/pp.rb +2 -0
  507. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/pp/character_data.rb +18 -0
  508. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/pp/node.rb +56 -0
  509. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/processing_instruction.rb +8 -0
  510. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/reader.rb +112 -0
  511. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/relax_ng.rb +32 -0
  512. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/sax.rb +4 -0
  513. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/sax/document.rb +164 -0
  514. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/sax/parser.rb +115 -0
  515. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/sax/parser_context.rb +16 -0
  516. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/sax/push_parser.rb +60 -0
  517. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/schema.rb +63 -0
  518. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/syntax_error.rb +47 -0
  519. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/text.rb +9 -0
  520. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/xpath.rb +10 -0
  521. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/xpath/syntax_error.rb +11 -0
  522. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xml/xpath_context.rb +16 -0
  523. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xslt.rb +52 -0
  524. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/nokogiri/xslt/stylesheet.rb +25 -0
  525. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/lib/xsd/xmlparser/nokogiri.rb +90 -0
  526. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/tasks/cross_compile.rb +173 -0
  527. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/tasks/test.rb +94 -0
  528. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/css/test_nthiness.rb +159 -0
  529. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/css/test_parser.rb +303 -0
  530. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/css/test_tokenizer.rb +198 -0
  531. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/css/test_xpath_visitor.rb +85 -0
  532. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/decorators/test_slop.rb +16 -0
  533. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/ffi/test_document.rb +35 -0
  534. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/2ch.html +108 -0
  535. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/address_book.rlx +12 -0
  536. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/address_book.xml +10 -0
  537. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/bar/bar.xsd +4 -0
  538. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/dont_hurt_em_why.xml +422 -0
  539. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/encoding.html +82 -0
  540. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/encoding.xhtml +84 -0
  541. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/exslt.xml +8 -0
  542. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/exslt.xslt +35 -0
  543. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/foo/foo.xsd +4 -0
  544. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/po.xml +32 -0
  545. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/po.xsd +66 -0
  546. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/shift_jis.html +10 -0
  547. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/shift_jis.xml +5 -0
  548. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/snuggles.xml +3 -0
  549. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/staff.dtd +10 -0
  550. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/staff.xml +59 -0
  551. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/staff.xslt +32 -0
  552. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/tlm.html +850 -0
  553. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/files/valid_bar.xml +2 -0
  554. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/helper.rb +171 -0
  555. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/html/sax/test_parser.rb +119 -0
  556. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/html/sax/test_parser_context.rb +48 -0
  557. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/html/test_builder.rb +164 -0
  558. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/html/test_document.rb +453 -0
  559. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/html/test_document_encoding.rb +123 -0
  560. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/html/test_document_fragment.rb +253 -0
  561. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/html/test_element_description.rb +98 -0
  562. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/html/test_named_characters.rb +14 -0
  563. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/html/test_node.rb +190 -0
  564. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/html/test_node_encoding.rb +27 -0
  565. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/test_convert_xpath.rb +135 -0
  566. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/test_css_cache.rb +45 -0
  567. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/test_encoding_handler.rb +46 -0
  568. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/test_memory_leak.rb +107 -0
  569. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/test_nokogiri.rb +138 -0
  570. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/test_reader.rb +421 -0
  571. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/test_soap4r_sax.rb +52 -0
  572. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/test_xslt_transforms.rb +193 -0
  573. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/node/test_save_options.rb +20 -0
  574. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/node/test_subclass.rb +44 -0
  575. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/sax/test_parser.rb +331 -0
  576. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/sax/test_parser_context.rb +113 -0
  577. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/sax/test_push_parser.rb +156 -0
  578. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_attr.rb +65 -0
  579. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_attribute_decl.rb +82 -0
  580. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_builder.rb +210 -0
  581. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_cdata.rb +50 -0
  582. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_comment.rb +29 -0
  583. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_document.rb +670 -0
  584. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_document_encoding.rb +26 -0
  585. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_document_fragment.rb +192 -0
  586. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_dtd.rb +97 -0
  587. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_dtd_encoding.rb +33 -0
  588. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_element_content.rb +56 -0
  589. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_element_decl.rb +73 -0
  590. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_entity_decl.rb +120 -0
  591. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_entity_reference.rb +21 -0
  592. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_namespace.rb +68 -0
  593. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_node.rb +906 -0
  594. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_node_attributes.rb +34 -0
  595. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_node_encoding.rb +107 -0
  596. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_node_reparenting.rb +321 -0
  597. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_node_set.rb +708 -0
  598. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_parse_options.rb +52 -0
  599. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_processing_instruction.rb +30 -0
  600. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_reader_encoding.rb +126 -0
  601. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_relax_ng.rb +60 -0
  602. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_schema.rb +94 -0
  603. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_syntax_error.rb +12 -0
  604. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_text.rb +47 -0
  605. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_unparented_node.rb +381 -0
  606. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xml/test_xpath.rb +237 -0
  607. data/search_biomodel/ruby/1.8/gems/nokogiri-1.4.6/test/xslt/test_custom_functions.rb +94 -0
  608. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/.gitignore +7 -0
  609. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/.rspec +1 -0
  610. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/.travis.yml +8 -0
  611. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/CHANGELOG.md +90 -0
  612. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/Gemfile +4 -0
  613. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/LICENSE +20 -0
  614. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/README.md +64 -0
  615. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/Rakefile +16 -0
  616. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/benchmark/benchmark.rb +19 -0
  617. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/benchmark/soap_response.xml +266 -0
  618. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/lib/nori.rb +59 -0
  619. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/lib/nori/core_ext.rb +3 -0
  620. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/lib/nori/core_ext/hash.rb +70 -0
  621. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/lib/nori/core_ext/object.rb +13 -0
  622. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/lib/nori/core_ext/string.rb +21 -0
  623. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/lib/nori/parser.rb +51 -0
  624. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/lib/nori/parser/nokogiri.rb +45 -0
  625. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/lib/nori/parser/rexml.rb +38 -0
  626. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/lib/nori/string_io_file.rb +7 -0
  627. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/lib/nori/string_with_attributes.rb +7 -0
  628. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/lib/nori/version.rb +5 -0
  629. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/lib/nori/xml_utility_node.rb +230 -0
  630. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/nori.gemspec +24 -0
  631. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/spec/nori/core_ext/hash_spec.rb +60 -0
  632. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/spec/nori/core_ext/object_spec.rb +19 -0
  633. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/spec/nori/core_ext/string_spec.rb +33 -0
  634. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/spec/nori/nori_spec.rb +641 -0
  635. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/spec/nori/parser_spec.rb +37 -0
  636. data/search_biomodel/ruby/1.8/gems/nori-1.0.1/spec/spec_helper.rb +2 -0
  637. data/search_biomodel/ruby/1.8/gems/pyu-ntlm-http-0.1.3.1/README +25 -0
  638. data/search_biomodel/ruby/1.8/gems/pyu-ntlm-http-0.1.3.1/Rakefile +68 -0
  639. data/search_biomodel/ruby/1.8/gems/pyu-ntlm-http-0.1.3.1/examples/http.rb +86 -0
  640. data/search_biomodel/ruby/1.8/gems/pyu-ntlm-http-0.1.3.1/examples/imap.rb +73 -0
  641. data/search_biomodel/ruby/1.8/gems/pyu-ntlm-http-0.1.3.1/examples/smtp.rb +94 -0
  642. data/search_biomodel/ruby/1.8/gems/pyu-ntlm-http-0.1.3.1/lib/net/ntlm.rb +775 -0
  643. data/search_biomodel/ruby/1.8/gems/pyu-ntlm-http-0.1.3.1/lib/net/ntlm_http.rb +87 -0
  644. data/search_biomodel/ruby/1.8/gems/pyu-ntlm-http-0.1.3.1/test/function_test.rb +111 -0
  645. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/COPYING +18 -0
  646. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/KNOWN-ISSUES +21 -0
  647. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/README +425 -0
  648. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/Rakefile +100 -0
  649. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/SPEC +171 -0
  650. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/bin/rackup +4 -0
  651. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/contrib/rack_logo.svg +111 -0
  652. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/example/lobster.ru +4 -0
  653. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/example/protectedlobster.rb +14 -0
  654. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/example/protectedlobster.ru +8 -0
  655. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack.rb +82 -0
  656. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/auth/abstract/handler.rb +37 -0
  657. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/auth/abstract/request.rb +43 -0
  658. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/auth/basic.rb +58 -0
  659. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/auth/digest/md5.rb +129 -0
  660. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/auth/digest/nonce.rb +51 -0
  661. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/auth/digest/params.rb +53 -0
  662. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/auth/digest/request.rb +40 -0
  663. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/backports/uri/common.rb +64 -0
  664. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/builder.rb +137 -0
  665. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/cascade.rb +41 -0
  666. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/chunked.rb +56 -0
  667. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/commonlogger.rb +49 -0
  668. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/conditionalget.rb +66 -0
  669. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/config.rb +15 -0
  670. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/content_length.rb +33 -0
  671. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/content_type.rb +23 -0
  672. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/deflater.rb +99 -0
  673. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/directory.rb +157 -0
  674. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/etag.rb +60 -0
  675. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/file.rb +125 -0
  676. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/handler.rb +94 -0
  677. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/handler/cgi.rb +61 -0
  678. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/handler/evented_mongrel.rb +8 -0
  679. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/handler/fastcgi.rb +98 -0
  680. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/handler/lsws.rb +61 -0
  681. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/handler/mongrel.rb +100 -0
  682. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/handler/scgi.rb +67 -0
  683. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/handler/swiftiplied_mongrel.rb +8 -0
  684. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/handler/thin.rb +24 -0
  685. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/handler/webrick.rb +80 -0
  686. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/head.rb +19 -0
  687. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/lint.rb +567 -0
  688. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/lobster.rb +65 -0
  689. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/lock.rb +44 -0
  690. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/logger.rb +18 -0
  691. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/methodoverride.rb +27 -0
  692. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/mime.rb +210 -0
  693. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/mock.rb +185 -0
  694. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/multipart.rb +34 -0
  695. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/multipart/generator.rb +93 -0
  696. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/multipart/parser.rb +164 -0
  697. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/multipart/uploaded_file.rb +30 -0
  698. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/nulllogger.rb +18 -0
  699. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/recursive.rb +61 -0
  700. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/reloader.rb +109 -0
  701. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/request.rb +309 -0
  702. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/response.rb +152 -0
  703. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/rewindable_input.rb +104 -0
  704. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/runtime.rb +27 -0
  705. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/sendfile.rb +140 -0
  706. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/server.rb +323 -0
  707. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/session/abstract/id.rb +351 -0
  708. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/session/cookie.rb +152 -0
  709. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/session/memcache.rb +93 -0
  710. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/session/pool.rb +79 -0
  711. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/showexceptions.rb +378 -0
  712. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/showstatus.rb +113 -0
  713. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/static.rb +58 -0
  714. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/urlmap.rb +60 -0
  715. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/lib/rack/utils.rb +480 -0
  716. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/rack.gemspec +37 -0
  717. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/builder/anything.rb +5 -0
  718. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/builder/comment.ru +4 -0
  719. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/builder/end.ru +3 -0
  720. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/builder/options.ru +2 -0
  721. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/cgi/lighttpd.conf +25 -0
  722. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/cgi/rackup_stub.rb +6 -0
  723. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/cgi/sample_rackup.ru +5 -0
  724. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/cgi/test +9 -0
  725. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/cgi/test.fcgi +8 -0
  726. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/cgi/test.ru +5 -0
  727. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/gemloader.rb +6 -0
  728. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/bad_robots +259 -0
  729. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/binary +0 -0
  730. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/content_type_and_no_filename +6 -0
  731. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/empty +10 -0
  732. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/fail_16384_nofile +814 -0
  733. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/file1.txt +1 -0
  734. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/filename_and_modification_param +7 -0
  735. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/filename_with_escaped_quotes +6 -0
  736. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/filename_with_escaped_quotes_and_modification_param +7 -0
  737. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/filename_with_percent_escaped_quotes +6 -0
  738. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/filename_with_unescaped_quotes +6 -0
  739. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/ie +6 -0
  740. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/mixed_files +21 -0
  741. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/nested +10 -0
  742. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/none +9 -0
  743. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/semicolon +6 -0
  744. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/text +15 -0
  745. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/multipart/webkit +32 -0
  746. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/rackup/config.ru +31 -0
  747. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/registering_handler/rack/handler/registering_myself.rb +8 -0
  748. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_auth_basic.rb +70 -0
  749. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_auth_digest.rb +244 -0
  750. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_builder.rb +152 -0
  751. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_cascade.rb +45 -0
  752. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_cgi.rb +102 -0
  753. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_chunked.rb +60 -0
  754. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_commonlogger.rb +56 -0
  755. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_conditionalget.rb +86 -0
  756. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_config.rb +23 -0
  757. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_content_length.rb +73 -0
  758. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_content_type.rb +29 -0
  759. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_deflater.rb +169 -0
  760. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_directory.rb +57 -0
  761. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_etag.rb +82 -0
  762. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_fastcgi.rb +107 -0
  763. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_file.rb +122 -0
  764. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_handler.rb +59 -0
  765. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_head.rb +30 -0
  766. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_lint.rb +515 -0
  767. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_lobster.rb +43 -0
  768. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_lock.rb +142 -0
  769. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_logger.rb +28 -0
  770. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_methodoverride.rb +58 -0
  771. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_mock.rb +241 -0
  772. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_mongrel.rb +182 -0
  773. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_multipart.rb +287 -0
  774. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_nulllogger.rb +12 -0
  775. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_recursive.rb +69 -0
  776. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_request.rb +813 -0
  777. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_response.rb +246 -0
  778. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_rewindable_input.rb +118 -0
  779. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_runtime.rb +39 -0
  780. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_sendfile.rb +83 -0
  781. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_server.rb +74 -0
  782. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_session_abstract_id.rb +43 -0
  783. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_session_cookie.rb +210 -0
  784. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_session_memcache.rb +289 -0
  785. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_session_pool.rb +200 -0
  786. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_showexceptions.rb +87 -0
  787. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_showstatus.rb +79 -0
  788. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_static.rb +56 -0
  789. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_thin.rb +86 -0
  790. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_urlmap.rb +213 -0
  791. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_utils.rb +430 -0
  792. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/spec_webrick.rb +141 -0
  793. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/testrequest.rb +78 -0
  794. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/unregistered_handler/rack/handler/unregistered.rb +7 -0
  795. data/search_biomodel/ruby/1.8/gems/rack-1.3.0/test/unregistered_handler/rack/handler/unregistered_long_one.rb +7 -0
  796. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/.gemtest +0 -0
  797. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/CHANGES +509 -0
  798. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/MIT-LICENSE +21 -0
  799. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/README.rdoc +200 -0
  800. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/RRR +9 -0
  801. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/Rakefile +405 -0
  802. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/TODO +20 -0
  803. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/bin/rake +32 -0
  804. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/install.rb +90 -0
  805. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake.rb +65 -0
  806. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/alt_system.rb +109 -0
  807. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/application.rb +589 -0
  808. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/classic_namespace.rb +9 -0
  809. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/clean.rb +31 -0
  810. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/cloneable.rb +25 -0
  811. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/contrib/compositepublisher.rb +21 -0
  812. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/contrib/ftptools.rb +150 -0
  813. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/contrib/publisher.rb +69 -0
  814. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/contrib/rubyforgepublisher.rb +16 -0
  815. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/contrib/sshpublisher.rb +45 -0
  816. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/contrib/sys.rb +191 -0
  817. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/default_loader.rb +10 -0
  818. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/dsl_definition.rb +167 -0
  819. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/early_time.rb +18 -0
  820. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/ext/core.rb +27 -0
  821. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/ext/module.rb +39 -0
  822. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/ext/string.rb +167 -0
  823. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/ext/time.rb +14 -0
  824. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/file_creation_task.rb +24 -0
  825. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/file_list.rb +403 -0
  826. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/file_task.rb +47 -0
  827. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/file_utils.rb +112 -0
  828. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/file_utils_ext.rb +142 -0
  829. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/gempackagetask.rb +13 -0
  830. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/invocation_chain.rb +51 -0
  831. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/invocation_exception_mixin.rb +16 -0
  832. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/loaders/makefile.rb +40 -0
  833. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/multi_task.rb +16 -0
  834. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/name_space.rb +25 -0
  835. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/packagetask.rb +185 -0
  836. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/pathmap.rb +1 -0
  837. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/pseudo_status.rb +24 -0
  838. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/rake_module.rb +29 -0
  839. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/rake_test_loader.rb +13 -0
  840. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/rdoctask.rb +230 -0
  841. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/ruby182_test_unit_fix.rb +25 -0
  842. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/rule_recursion_overflow_error.rb +20 -0
  843. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/runtest.rb +21 -0
  844. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/task.rb +327 -0
  845. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/task_argument_error.rb +7 -0
  846. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/task_arguments.rb +74 -0
  847. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/task_manager.rb +307 -0
  848. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/tasklib.rb +22 -0
  849. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/testtask.rb +191 -0
  850. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/version.rb +10 -0
  851. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/lib/rake/win32.rb +55 -0
  852. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/check_expansion.rb +5 -0
  853. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/check_no_expansion.rb +5 -0
  854. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/access/Rakefile +35 -0
  855. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/chains/Rakefile +15 -0
  856. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/comments/Rakefile +18 -0
  857. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/default/Rakefile +17 -0
  858. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/deprecated_import/Rakefile +1 -0
  859. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/dryrun/Rakefile +22 -0
  860. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/extra/Rakefile +1 -0
  861. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/file_creation_task/Rakefile +31 -0
  862. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/imports/Rakefile +19 -0
  863. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/imports/deps.mf +1 -0
  864. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/multidesc/Rakefile +15 -0
  865. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/namespace/Rakefile +64 -0
  866. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/rakelib/test1.rb +4 -0
  867. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/rbext/rakefile.rb +3 -0
  868. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/sample.mf +14 -0
  869. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/statusreturn/Rakefile +6 -0
  870. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/unittest/Rakefile +1 -0
  871. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/data/verbose/Rakefile +34 -0
  872. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/file_creation.rb +34 -0
  873. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/helper.rb +44 -0
  874. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/in_environment.rb +35 -0
  875. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/reqfile.rb +3 -0
  876. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/reqfile2.rb +3 -0
  877. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/shellcommand.rb +3 -0
  878. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake.rb +38 -0
  879. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_application.rb +364 -0
  880. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_application_options.rb +382 -0
  881. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_clean.rb +12 -0
  882. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_definitions.rb +80 -0
  883. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_directory_task.rb +55 -0
  884. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_dsl.rb +73 -0
  885. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_early_time.rb +31 -0
  886. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_extension.rb +59 -0
  887. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_file_creation_task.rb +62 -0
  888. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_file_list.rb +633 -0
  889. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_file_list_path_map.rb +8 -0
  890. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_file_task.rb +104 -0
  891. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_file_utils.rb +252 -0
  892. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_ftp_file.rb +59 -0
  893. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_functional.rb +468 -0
  894. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_invocation_chain.rb +52 -0
  895. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_makefile_loader.rb +23 -0
  896. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_multi_task.rb +51 -0
  897. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_name_space.rb +43 -0
  898. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_package_task.rb +78 -0
  899. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_path_map.rb +157 -0
  900. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_path_map_explode.rb +31 -0
  901. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_path_map_partial.rb +18 -0
  902. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_pseudo_status.rb +20 -0
  903. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_rdoc_task.rb +81 -0
  904. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_require.rb +35 -0
  905. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_rules.rb +346 -0
  906. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_task.rb +271 -0
  907. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_task_argument_parsing.rb +116 -0
  908. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_task_arguments.rb +86 -0
  909. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_task_lib.rb +9 -0
  910. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_task_manager.rb +145 -0
  911. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_task_manager_argument_resolution.rb +36 -0
  912. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_task_with_arguments.rb +162 -0
  913. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_test_task.rb +122 -0
  914. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_top_level_functions.rb +76 -0
  915. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_win32.rb +83 -0
  916. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_sys.rb +20 -0
  917. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/BLURB +111 -0
  918. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/LICENSE +53 -0
  919. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/Rakefile +103 -0
  920. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/THANKS +110 -0
  921. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/bin/rcov +522 -0
  922. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/editor-extensions/rcov.el +131 -0
  923. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/editor-extensions/rcov.vim +38 -0
  924. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/1.8/callsite.c +216 -0
  925. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/1.8/rcovrt.c +294 -0
  926. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/1.9/callsite.c +234 -0
  927. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/1.9/rcovrt.c +264 -0
  928. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/Makefile +157 -0
  929. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/callsite.o +0 -0
  930. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/extconf.rb +21 -0
  931. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/rcovrt.o +0 -0
  932. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/rcovrt.so +0 -0
  933. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov.rb +33 -0
  934. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/call_site_analyzer.rb +225 -0
  935. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/code_coverage_analyzer.rb +271 -0
  936. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/coverage_info.rb +36 -0
  937. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/differential_analyzer.rb +116 -0
  938. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/file_statistics.rb +355 -0
  939. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters.rb +13 -0
  940. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/base_formatter.rb +174 -0
  941. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/failure_report.rb +15 -0
  942. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/full_text_report.rb +48 -0
  943. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/html_coverage.rb +274 -0
  944. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/html_erb_template.rb +62 -0
  945. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/text_coverage_diff.rb +193 -0
  946. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/text_report.rb +32 -0
  947. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/text_summary.rb +11 -0
  948. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/lowlevel.rb +146 -0
  949. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/rcovtask.rb +156 -0
  950. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/detail.html.erb +64 -0
  951. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/index.html.erb +93 -0
  952. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/jquery-1.3.2.min.js +19 -0
  953. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/jquery.tablesorter.min.js +15 -0
  954. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/print.css +12 -0
  955. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/rcov.js +42 -0
  956. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/screen.css +270 -0
  957. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/version.rb +10 -0
  958. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcovrt.so +0 -0
  959. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/setup.rb +1588 -0
  960. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_01.rb +7 -0
  961. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_02.rb +5 -0
  962. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_03.rb +20 -0
  963. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_04.rb +10 -0
  964. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_05-new.rb +17 -0
  965. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_05-old.rb +13 -0
  966. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_05.rb +17 -0
  967. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_06.rb +8 -0
  968. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/call_site_analyzer_test.rb +171 -0
  969. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/code_coverage_analyzer_test.rb +220 -0
  970. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/diff-gcc-all.out +7 -0
  971. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/diff-gcc-diff.out +11 -0
  972. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/diff-gcc-original.out +5 -0
  973. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/diff-no-color.out +12 -0
  974. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/diff.out +12 -0
  975. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/gcc-text.out +10 -0
  976. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/sample_03_rb.html +651 -0
  977. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/sample_03_rb.rb +28 -0
  978. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/sample_04_rb.html +641 -0
  979. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/file_statistics_test.rb +471 -0
  980. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/functional_test.rb +91 -0
  981. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/test_helper.rb +4 -0
  982. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/turn_off_rcovrt.rb +4 -0
  983. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/.gitignore +9 -0
  984. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/.rspec +1 -0
  985. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/.travis.yml +7 -0
  986. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/.yardopts +2 -0
  987. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/CHANGELOG.md +533 -0
  988. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/Gemfile +4 -0
  989. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/LICENSE +20 -0
  990. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/README.md +39 -0
  991. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/Rakefile +40 -0
  992. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon.rb +14 -0
  993. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/client.rb +161 -0
  994. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/core_ext/hash.rb +70 -0
  995. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/core_ext/object.rb +14 -0
  996. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/core_ext/string.rb +51 -0
  997. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/core_ext/time.rb +22 -0
  998. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/error.rb +6 -0
  999. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/global.rb +83 -0
  1000. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/http/error.rb +42 -0
  1001. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/soap.rb +24 -0
  1002. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/soap/fault.rb +59 -0
  1003. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/soap/request.rb +61 -0
  1004. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/soap/response.rb +85 -0
  1005. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/soap/xml.rb +184 -0
  1006. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/version.rb +5 -0
  1007. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/wsdl/document.rb +112 -0
  1008. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/wsdl/parser.rb +96 -0
  1009. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/wsdl/request.rb +35 -0
  1010. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/wsse.rb +156 -0
  1011. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/savon.gemspec +30 -0
  1012. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/gzip/message.gz +0 -0
  1013. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/another_soap_fault.xml +14 -0
  1014. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/authentication.xml +14 -0
  1015. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/header.xml +13 -0
  1016. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/list.xml +18 -0
  1017. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/multi_ref.xml +39 -0
  1018. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/soap_fault.xml +8 -0
  1019. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/soap_fault12.xml +18 -0
  1020. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/wsdl/authentication.xml +63 -0
  1021. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/wsdl/geotrust.xml +156 -0
  1022. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/wsdl/namespaced_actions.xml +307 -0
  1023. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/wsdl/no_namespace.xml +115 -0
  1024. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/wsdl/soap12.xml +11 -0
  1025. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/wsdl/two_bindings.xml +25 -0
  1026. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/client_spec.rb +354 -0
  1027. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/core_ext/hash_spec.rb +121 -0
  1028. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/core_ext/object_spec.rb +19 -0
  1029. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/core_ext/string_spec.rb +57 -0
  1030. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/core_ext/time_spec.rb +13 -0
  1031. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/http/error_spec.rb +52 -0
  1032. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/savon_spec.rb +85 -0
  1033. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/soap/fault_spec.rb +89 -0
  1034. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/soap/request_spec.rb +45 -0
  1035. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/soap/response_spec.rb +181 -0
  1036. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/soap/xml_spec.rb +341 -0
  1037. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/soap_spec.rb +21 -0
  1038. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/wsdl/document_spec.rb +132 -0
  1039. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/wsdl/parser_spec.rb +107 -0
  1040. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/wsdl/request_spec.rb +15 -0
  1041. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/wsse_spec.rb +232 -0
  1042. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/spec_helper.rb +14 -0
  1043. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/support/endpoint.rb +25 -0
  1044. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/support/fixture.rb +37 -0
  1045. data/search_biomodel/ruby/1.8/specifications/builder-3.0.0.gemspec +36 -0
  1046. data/search_biomodel/ruby/1.8/specifications/git-1.2.5.gemspec +30 -0
  1047. data/search_biomodel/ruby/1.8/specifications/gyoku-0.4.4.gemspec +41 -0
  1048. data/search_biomodel/ruby/1.8/specifications/httpi-0.9.4.gemspec +49 -0
  1049. data/search_biomodel/ruby/1.8/specifications/jeweler-1.6.2.gemspec +79 -0
  1050. data/search_biomodel/ruby/1.8/specifications/nokogiri-1.4.6.gemspec +53 -0
  1051. data/search_biomodel/ruby/1.8/specifications/nori-1.0.1.gemspec +38 -0
  1052. data/search_biomodel/ruby/1.8/specifications/pyu-ntlm-http-0.1.3.1.gemspec +31 -0
  1053. data/search_biomodel/ruby/1.8/specifications/rack-1.3.0.gemspec +57 -0
  1054. data/search_biomodel/ruby/1.8/specifications/rake-0.9.2.gemspec +43 -0
  1055. data/search_biomodel/ruby/1.8/specifications/rcov-0.9.9.gemspec +34 -0
  1056. data/search_biomodel/ruby/1.8/specifications/savon-0.9.2.gemspec +55 -0
  1057. data/test/test_search_biomodel.rb +29 -4
  1058. metadata +1071 -36
  1059. data/test.rb +0 -1
@@ -0,0 +1,175 @@
1
+ require 'test_helper'
2
+
3
+ class TestJeweler < Test::Unit::TestCase
4
+
5
+ def build_jeweler(base_dir = nil)
6
+ base_dir ||= git_dir_path
7
+ FileUtils.mkdir_p base_dir
8
+
9
+ Jeweler.new(build_spec, base_dir)
10
+ end
11
+
12
+ def git_dir_path
13
+ File.join(tmp_dir, 'git')
14
+ end
15
+
16
+ def non_git_dir_path
17
+ File.join(tmp_dir, 'nongit')
18
+ end
19
+
20
+ def build_git_dir
21
+
22
+ FileUtils.mkdir_p git_dir_path
23
+ Dir.chdir git_dir_path do
24
+ Git.init
25
+ end
26
+ end
27
+
28
+ def build_non_git_dir
29
+ FileUtils.mkdir_p non_git_dir_path
30
+ end
31
+
32
+ should "raise an error if a nil gemspec is given" do
33
+ assert_raises Jeweler::GemspecError do
34
+ Jeweler.new(nil)
35
+ end
36
+ end
37
+
38
+ should "know if it is in a git repo" do
39
+ build_git_dir
40
+
41
+ assert build_jeweler(git_dir_path).in_git_repo?
42
+ end
43
+
44
+ should "know if it is not in a git repo" do
45
+ build_non_git_dir
46
+
47
+ jeweler = build_jeweler(non_git_dir_path)
48
+ assert ! jeweler.in_git_repo?, "jeweler doesn't know that #{jeweler.base_dir} is not a git repository"
49
+ end
50
+
51
+ should "find the base repo" do
52
+ jeweler = build_jeweler(File.dirname(File.expand_path(__FILE__)))
53
+ assert_equal File.dirname(File.dirname(File.expand_path(__FILE__))), jeweler.git_base_dir
54
+ end
55
+
56
+ should "build and run write gemspec command when writing gemspec" do
57
+ jeweler = build_jeweler
58
+
59
+ command = Object.new
60
+ mock(command).run
61
+
62
+ mock(Jeweler::Commands::WriteGemspec).build_for(jeweler) { command }
63
+
64
+ jeweler.write_gemspec
65
+ end
66
+
67
+ should "build and run validate gemspec command when validating gemspec" do
68
+ jeweler = build_jeweler
69
+
70
+ command = Object.new
71
+ mock(command).run
72
+
73
+ mock(Jeweler::Commands::ValidateGemspec).build_for(jeweler) { command }
74
+
75
+ jeweler.validate_gemspec
76
+ end
77
+
78
+ should "build and run build gem command when building gem" do
79
+ jeweler = build_jeweler
80
+
81
+ command = Object.new
82
+ mock(command).run
83
+
84
+ mock(Jeweler::Commands::BuildGem).build_for(jeweler) { command }
85
+
86
+ jeweler.build_gem
87
+ end
88
+
89
+ should "build and run build gem command when installing gem" do
90
+ jeweler = build_jeweler
91
+
92
+ command = Object.new
93
+ mock(command).run
94
+
95
+ mock(Jeweler::Commands::InstallGem).build_for(jeweler) { command }
96
+
97
+ jeweler.install_gem
98
+ end
99
+
100
+ should "build and run bump major version command when bumping major version" do
101
+ jeweler = build_jeweler
102
+
103
+ command = Object.new
104
+ mock(command).run
105
+
106
+ mock(Jeweler::Commands::Version::BumpMajor).build_for(jeweler) { command }
107
+
108
+ jeweler.bump_major_version
109
+ end
110
+
111
+ should "build and run bump minor version command when bumping minor version" do
112
+ jeweler = build_jeweler
113
+
114
+ command = Object.new
115
+ mock(command).run
116
+
117
+ mock(Jeweler::Commands::Version::BumpMinor).build_for(jeweler) { command }
118
+
119
+ jeweler.bump_minor_version
120
+ end
121
+
122
+ should "build and run write version command when writing version" do
123
+ jeweler = build_jeweler
124
+
125
+ command = Object.new
126
+ mock(command).run
127
+ mock(command).major=(1)
128
+ mock(command).minor=(5)
129
+ mock(command).patch=(2)
130
+ mock(command).build=('a1')
131
+
132
+ mock(Jeweler::Commands::Version::Write).build_for(jeweler) { command }
133
+
134
+ jeweler.write_version(1, 5, 2, 'a1')
135
+ end
136
+
137
+ should "build and run release to github command when running release_gemspec" do
138
+ jeweler = build_jeweler
139
+
140
+ command = Object.new
141
+ mock(command).run
142
+
143
+ mock(Jeweler::Commands::ReleaseGemspec).build_for(jeweler) { command }
144
+
145
+ jeweler.release_gemspec
146
+ end
147
+
148
+ should "build and run release to git command when running release_to_git" do
149
+ jeweler = build_jeweler
150
+
151
+ command = Object.new
152
+ mock(command).run
153
+
154
+ mock(Jeweler::Commands::ReleaseToGit).build_for(jeweler) { command }
155
+
156
+ jeweler.release_to_git
157
+ end
158
+
159
+ should "respond to gemspec_helper" do
160
+ assert_respond_to build_jeweler, :gemspec_helper
161
+ end
162
+
163
+ should "respond to version_helper" do
164
+ assert_respond_to build_jeweler, :version_helper
165
+ end
166
+
167
+ should "respond to repo" do
168
+ assert_respond_to build_jeweler, :repo
169
+ end
170
+
171
+ should "respond to commit" do
172
+ assert_respond_to build_jeweler, :commit
173
+ end
174
+
175
+ end
@@ -0,0 +1,26 @@
1
+ # -*- ruby -*-
2
+
3
+ begin
4
+ require 'autotest/fsevent'
5
+ rescue LoadError
6
+ end
7
+
8
+ Autotest.add_hook :initialize do |at|
9
+ at.add_exception /bundle$/
10
+ at.add_exception /\.git/
11
+ end
12
+
13
+ Autotest.add_hook :run_command do |at|
14
+ at.unit_diff = 'cat'
15
+ if ENV['ONENINE']
16
+ system "rake1.9 compile"
17
+ else
18
+ system "rake compile"
19
+ end
20
+ end
21
+
22
+ Autotest.add_hook :ran_command do |at|
23
+ File.open('/tmp/autotest.txt', 'wb') { |f|
24
+ f.write(at.results.join)
25
+ }
26
+ end
@@ -0,0 +1,480 @@
1
+ === 1.4.6 / 2011年6月19日
2
+
3
+ * ノート
4
+
5
+ * このバージョンは、1.4.5と機能的に同じです
6
+ * Rubyの1.8.6のサポートが復元されている
7
+
8
+ === 1.4.5 / 2011年6月15日
9
+
10
+ * 新機能
11
+
12
+ * Nokogiri::HTML::Document#title アクセサメソッドでHTML文書のタイトルを読み書きできる
13
+
14
+ * バグの修正
15
+
16
+ * Node#serialize とその仲間達はSaveOptionオブジェクトを受け入れる
17
+ * Nokogiri::CSS::Parser has-a Nokogiri::CSS::Tokenizer
18
+ * [JRUBY+FFIのみ] 「弱い参照」はスレッドセーフになった. #355
19
+ * HTML::SAX::Parserから呼ばれるstart_element()コールバックのattributes引数はHTML::XML::Parserによるエミュレートコールバックと同じく連想配列になった. rel. #356
20
+ * HTML::SAX::Parserのparse*()メソッドはXML::SAX::Parser同様に渡されたブロックをコールバックするようになった.
21
+ * HTMLパーサーのエンコーディング判定をlibxml2の仕様を超えて拡張・改善した. (XML宣言のencodingを認識、非ASCII文字出現後のmetaタグも文字化けを生じずに反映)
22
+ * Document#remove_namespaces! は名前空間付きの属性に対応した. #396
23
+
24
+ === 1.4.4 2010年11月15日
25
+
26
+ * 新機能
27
+
28
+ * XML::Node#children=ノード内のhtml reparented node(s)を返す事によって親の変更ができる。
29
+ * XSLT はfunction extensionsをサポート。#336
30
+ * XPath はパラメーター置換を結合する. #329
31
+ * XML::Reader node typeを一定化させる. #369
32
+ * SAX Parser context は行とコラムの両方の情報を提供する
33
+
34
+ * バグの修正
35
+
36
+ * XML::DTD#attributes は属性が存在しない際、nilの代わりに空のハッシュを返す
37
+ * XML::DTD#{keys,each} は文字通りに機能するようになった #324
38
+ * {XML,HTML}::DocumentFragment.{new,parse} 行送りと末尾の空白を除去しなくなった #319
39
+ * XML::Node#{add_child,add_previous_sibling,add_next_sibling,replace} は文字列を見送る際にNodeSetを返す
40
+ * 不確定タグはフレグメント内で要、不要に関係なく解析される #315
41
+ * XML::Node#{replace,add_previous_sibling,add_next_sibling} libxmlのtext node merging に関わるedge caseを修正する #308
42
+ * xpath handler argument が整列している最中に起こるGCでのsegfaultを修正 #345
43
+ * Slop decoratorが既に確定された定義と共に正常に機能させるための便宜上の処置 #330
44
+ * 子ノードが複製される際に起こるメモリ漏れの修正 #353
45
+ * an+b記号の無使用時に発生するoff-by-oneバグとnth-last-{child,of-type} CSSセレクターの修正 #354
46
+ * 非名前空間属性がSAX::Document#start_elementへパスできるように修正 #356
47
+ * libxml2 in-contextの解析バグの処置  #362
48
+ * フレグメント内のノードの中にあるNodeSet#wrapの修正 #331
49
+
50
+ === 1.4.3 2010年7月28日
51
+
52
+ * 新しい機能
53
+
54
+ * XML::Reader#empty_element? - 子の無いエレメントにtrueを返す  #262
55
+ * Node#remove_namespaces! - 1.4.2では 名前空間のみを取り除いていたが、
56
+ 1.4.3 では名前空間及び、名前空間宣言も取り除く #294
57
+
58
+ * バグの修正
59
+
60
+ * XML::NodeSet#{include?,delete,push} はXML::Namespaceを受入れる
61
+ * XML::Document#parse - 1.4.3より文書内の文脈を解析する機能を追加
62
+ * XML::DocumentFragment#inner_html= 文脈解析を共に実行する #298, #281
63
+ * lib/nokogiri/css/parser.y はCSSと疑似選別の両方を機能
64
+ * 演算によって近隣に存在する併合型ノードへの遊離問題の有無に関わらず、一切の
65
+ 弊害なしにテキストノードの繰り返しが実行可能  #283
66
+ * xmlFirstElementChild et al.による libxml2バージョンでの不適合性を修正 #303
67
+ * XML::Attr#add_namespace (!)文字通りの機能実現!  #252
68
+ * HTML::DocumentFragment が文字列に存在するエンコードを使用 #305
69
+
70
+ === 1.4.2 2010年5月22日
71
+
72
+ * 新機能
73
+
74
+ * XML::Node#parse 定義されたコンテキストノードでXML 又はHTMLのフレグメント
75
+ を解析する
76
+ * XML::Node#namespacesが子ノードとその祖先ノード内で定義された全ての名前空間
77
+ を返すようになった(以前は祖先ノードの名前空間は返されなかった)
78
+ * XML::Node内にEnumerableを追加
79
+ * Nokogiri::XML::Schema#validate 与えられたファイル名が引き渡された時、
80
+ Nokogiri::XML::Schema#validateはxmlSchemaValidateFileを使用する
81
+ (時間短縮化とメモリーの能率化の理由を基にファイル名での引き渡しメソッドを
82
+ 採用) GH #219
83
+ * XML::Document#create_entnty は新規のEntityDecl のオブジェクトを生成する
84
+ GH #174
85
+ * JRuby FFI implementationでは、従来まで使用されたObjectSpace._id2refの代わり
86
+ にCharles Nutterのrocking Weakling gemを使用に変更
87
+ * Nokogiri::XML::Node#first_element_child は一番最初のELEMENT子ノードを返す
88
+ * Nokogiri::XML::Node#last_element_child は最後のELEMENT子ノードを返す
89
+ * Nokogiri::XML::Node#elements は全てのELEMENT子ノードを返す
90
+
91
+ * バグの修正
92
+
93
+ * ドキュメント内にデコレータがある場合、XML::NodeSet は常にデコレータされる GH #198
94
+ * XML::NodeSet#slice がノードセットよりも長いoffset+lengthを問題なく処理する
95
+ GH #200
96
+ * XML::Node#content=はノードとその直前に記述されている内容を支障なく切り離す
97
+ GH #203
98
+ * XML::Node#namespace= はnilを一つのパラメーターと扱って取得する
99
+ * XML::Node#xpath はNodeSetのオブジェクト以外のオブジェクトを返す GH #208
100
+ * XSLT::StyleSheet#transformはパラメーターのハッシュを受け入れる GH #223
101
+ * CSSのnot()の疑似セレクタの修正  GH #205
102
+ * XML::Builder はノードらが切り離されても破壊しない(vihaiの協力に感謝)
103
+ GH #228
104
+ * SAX parser経由でエンコードを強制することが出来る  Eugene Pimenovに感謝!
105
+ GH #204
106
+ * XML::DocumentFragment はML::Node#parse を使用して子を限定する
107
+ * XML Reader内のメモリリーク修正  sdorさん、ありがとう! GH#244
108
+
109
+ * ノート
110
+
111
+ * 今日4月18日現在、Windows gems は libxml 2.7.7 とlibxslt
112
+ 1.1.26にDLLsを標準装備しています。このリリース以前にも既にDLLsはlibxml
113
+ 2.7.3 と libxslt 1.1.24に標準装備済み。
114
+
115
+ === 1.4.1 2009年12月10日
116
+
117
+ * 新しい機能
118
+ * Nokogiri::LIBXML_ICONV_ENABLED を追加
119
+ * Node#attr は Node#[] のエイリアス定義に変更
120
+ * XML::Node#next_element を追加
121
+ * 直接の子ノードを検索するための Node#> を追加
122
+ * XML::NodeSet#reverse を追加
123
+ * 以下のfragment supportを追加
124
+   Node#add_child
125
+   Node#add_next_sibling
126
+ Node#add_previous_sibling
127
+   Node#replace
128
+ * XML::Node#previous_element を追加
129
+ * nokogiriがRubinius でサポートされるようになった
130
+ * CSS selector の :has() が使用可能になった
131
+ * XML::NodeSet#filter() を追加
132
+ * XML::Node.next= は add_next_sibling の alias へ変更
133
+ * XML::Node.previous= は add_previous_sibling の alias へ変更
134
+
135
+ * バグの修正
136
+ * XMLのフラグメントに名前空間が存在する場合のみ、DocumentFragmentを作る際に、
137
+ 例外が投げられなくなった
138
+ * DocumentFragment内で子ノードが存在する場合、
139
+ Node#matches?が機能するようになった GH #158
140
+ * Documentは add_namespace()を限定すべきではないので削除GH #169
141
+ * XPath クエリは名前空間の宣言を変換するがsegvではない。
142
+ * Node#replace は他のドキュメントのノードが使えるようになった
143
+ * XML::Document#collect_namespaces を追加
144
+ * SOAP4R のアダプター内のバグ修正
145
+ * XML::Node#next_element 内のバグ修正
146
+ * WindowsでのJRuby の LOAD_PATH を修正 GH #160
147
+ * XSLT#apply_toは "output method"の値を使用する(richardlehaneに感謝)
148
+ * 新しい文字列の先頭にくるテキストノードを含んだフレグメントが 正確に
149
+ 解析出来るようになった GH #178
150
+
151
+ === 1.4.0 2009年10月30日
152
+
153
+ * 今日はノコギリの満一歳のお誕生日です
154
+
155
+ * 新しい機能
156
+ * Node#at_xpath はXPath式に適合するNodeSetの一番最初の要素を返す
157
+ * Node#at_css はCSSセレクターに適合するNodeSetの一番最初の要素を返す
158
+ * NodeSet#| はNodeSet同士を合成する GH #119 (Serabe ありがとう!)
159
+ * NodeSet#inspect の出力をより美しくした
160
+ * Node#inspect の出力をよりrubyらしくした
161
+ * XML::DTD#external_id を追加
162
+ * XML::DTD#system_id を追加
163
+ * XML::ElementContent はDTD要素のコンテンツを有効化する
164
+ * Nokogiri::XML::Builder内での名前空間宣言用のサポートを改良
165
+ * XML::Node#external_subsetを追加
166
+ * XML::Node#create_external_subsetを追加
167
+ * XML::Node#create_internal_subsetを追加
168
+ * XML Builderは生成されていないstringsを付加出来る様になった
169
+ (GH #141, patch from dudleyf)
170
+ * XML::SAX::ParserContext を追加
171
+ * XML::Document#remove_namespaces! は名前空間を使いこなせない人たち用の措置
172
+
173
+ * バグの修正
174
+
175
+ * HTMLドキュメントが メタエンコーディングのタグを宣言しない時、
176
+ nilを返すようになった GH #115
177
+ * ENV['PATH'] を調節する為に、RbConfig::CONFIG['host_os']を使用できるように
178
+ なった GH #113
179
+ * NodeSet#searchが更に効率的になった GH #119 (Serabe!に感謝します)
180
+ * NodeSet#xpathがcustom xpath機能を取り扱える様になった
181
+ * XML::Reader が現時点のノード用に属性を取得する際に、
182
+ SEGVを修正するようになった
183
+ * Node#inner_html がNode#to_html と同じ独立変数を受け入れるようになった
184
+ GH #117
185
+ * DocumentFragment#css は子ノードへ委任するようになった GH #123
186
+ * NodeSet#[]がNodeSet#lengthより大きいスライスでも機能するようになった
187
+ GH #131
188
+ * 新たな親ノードの名前空間を維持出来るようになった GH #134
189
+ * XML::Document をNodeSetに追加する際のSEGVが修正された
190
+ * XML::SyntaxError が複製可能になった
191
+
192
+ * 廃棄予定
193
+
194
+ * Hpricot用の互換性レイヤーを削除
195
+
196
+ === 1.3.3 / 2009年7月26日
197
+
198
+ * 新しい機能
199
+
200
+ * NodeSet#children 全ての子ノードを返すようになった
201
+
202
+ * バグの修正
203
+
204
+ * libxml-ruby のグローバ ルエラー ハンドラー に優先するようになった
205
+ * ParseOption#strict を修正
206
+ * 空文字列を Node#inner_html= に与えた時に生じたSEGVを修正 GH #88
207
+ * Ruby 1.9 では文字列のエンコーディングをUTF-8になるようにした
208
+ * ドキュメントの根ノードから違うドキュメントの根ノードに移動した時に生じた
209
+ SEGVを修正 GH #91
210
+ * ノードをインスタンス化する時のO(n)のペナルティーを修正 GH #101
211
+ * XMLのドキュメントをHTMLのドキュメントとして出力出来るようになった
212
+
213
+ * 廃棄予定
214
+
215
+ * Hpricotの互換性レイヤーがNokogiriの1.4.0で除去される予定
216
+
217
+ === 1.3.2 / 2009年6月22日
218
+
219
+ * 新しい機能
220
+
221
+ * Nokogiri::XML::DTD#validate はドキュメントを検証できるようになった
222
+
223
+ * バグの修正
224
+
225
+ * Nokogiri::XML::NodeSet#search はトップレベルのノードを検索するようになった
226
+ GH #73
227
+ * Nokogiri::XML::Documentからメソッドに関係する名前空間を取り除いた
228
+ * 2回同じ名前空間が追加されたときSEGVする問題を修正した
229
+ * Snow Leopard で Nokogiri が動くようになった GH #79
230
+ * メーリングリストはGoogle Groupsの以下のURLに移動した
231
+ http://groups.google.com/group/nokogiri-talk
232
+ * HTML フラグメントはコメントとCDATAを正確に扱うようになった
233
+ * Nokogiri::XML::Document#cloneはdupのaliasになった
234
+
235
+ * 廃棄予定
236
+
237
+ * Nokogiri::XML::SAX::Document#start_element_nsは廃棄予定なので
238
+ Nokogiri::XML::SAX::Document#start_element_namespaceを代わりに使用して下さい
239
+ * Nokogiri::XML::SAX::Document#end_element_nsは廃棄予定なので
240
+ Nokogiri::XML::SAX::Document#end_element_namespaceを代わりに使用して下さい
241
+
242
+ === 1.3.1 / 2009年6月7日
243
+
244
+ * バグの修正
245
+
246
+ * extconf.rb は任意のRelaxNGとSchemaの機能を探すようになった
247
+ * ドキュメントのノードキャッシュに名前空間のノードが入るようになった
248
+
249
+ === 1.3.0 / 2009年5月30日
250
+
251
+ * 新しい機能
252
+
253
+ * Builderがブロックの引数の数に応じてスコープが定まるようになった
254
+ * Builderがアンダースコアで終わるメソッドをtagzと同様にサポートするようになった
255
+ * Nokogiri::XML::Node#<=> がドキュメントの位置によりノードを比較するように
256
+ なった
257
+ * Nokogiri::XML::Node#matches?が与えられたセレクタ内でノードがあればtrue
258
+ を返すようになった
259
+ * Nokogiri::XML::Node#ancestors がNokogiri::XML::NodeSetオブジェクトを返すようになった
260
+ * Nokogiri::XML::Node#ancestorsがオプションのセレクタに対応する親をマッチする
261
+ ようになった
262
+ * Nokogiri::HTML::Document#meta_encoding がメタデータのエンコードを返すように
263
+ なった
264
+ * Nokogiri::HTML::Document#meta_encoding= でメタデータのエンコードを
265
+ 設定できるようになった
266
+ * Nokogiri::XML::Document#encoding= でドキュメントのエンコードを
267
+ 設定できるようになった
268
+ * Nokogiri::XML::Schema でドキュメントがXSDのスキーマに沿って記述されているか
269
+ を検証できるようになった
270
+ * Nokogiri::XML::RelaxNG でドキュメントがRelaxNGのスキーマに沿って
271
+ 記述されているかを検証できるようになった
272
+ * Nokogiri::HTML::ElementDescription はHTML要素の説明フェッチ動作するよう
273
+ になった
274
+ * Nokogiri::XML::Node#descriptionは ノードの説明をフェッチ動作するよう
275
+ になった
276
+ * Nokogiri::XML::Node#accept は Visitor パターンを実行するようになった
277
+ * 簡単にドキュメントを解析するコマンド bin/nokogiri を追加
278
+ (Yataka HARAさんに感謝感激)
279
+ * Nokogiri::XML::NodeSetが更にArrayとEnumerableの演算を
280
+ サポートするようになった:
281
+ index, delete, slice, - (差分), + (連結), & (共通部分),
282
+ push, pop, shift, ==
283
+ * Nokogiri.XML, Nokogiri.HTML はNokogiri::XML::ParseOptions objectと一緒に
284
+ 呼び出されるブロックを受け入れるようになった
285
+ * Nokogiri::XML::Node#namespace は Nokogiri::XML::Namespaceを返すようになった
286
+ * Nokogiri::XML::Node#namespaceはノードの名前空間を設定するようになった
287
+ * FFI 経由で JRuby 1.3.0 をサポートするようになった
288
+
289
+ * バグの修正
290
+
291
+ * nilがCDATAsonstructorに渡される際の問題を修正
292
+ * Fragment メソッドが正規表現を抜け出させるようになった
293
+ (Joelさんに感謝感激) (LH #73)
294
+ * Builder スコープのLH #61, LH #74, LH #70に関しての様々な問題を修正
295
+ * 名前空間を付け加える時、名前空間が LH#78より除去されてしまう問題を修正
296
+ * 連結しないノードが発生し、再育成してしまう問題を修正(GH#22)
297
+ * XSLT が解析中にエラーを発見し損なう問題を修正(GH#32)
298
+ * CSS selectors内での条件属性のバグ問題を修正(GH#36)
299
+ * Node#before/after/inner_html=で値なしのHTML属性が受け入れられなかった問題を
300
+ 修正 (GH#35)
301
+
302
+ === 1.2.3 / 2009年3月22日
303
+
304
+ * バグの修正
305
+
306
+ * Node#new 内にて、バグを修正する
307
+ * DocumentFragmentの作成時、名前空間に割り当てる LH #66
308
+ * Nokogiri::XML::NodeSet#dup は機能するようになった GH #10
309
+ * Nokogiri::HTMLは文字列がブランクの時、空のドキュメントで返す GH#11
310
+ * 子ノードを付加する事で、重複した名前空間の宣言を取り除く LH#67
311
+ * ビルダ方法はハッシュを第二引数とする
312
+
313
+ === 1.2.2 / 2009年3月14日
314
+
315
+ * 新しい機能
316
+
317
+ * Nokogiri は soap4r と一緒に使う事が可能。(XSD::XMLParser::Nokogiri 参照)
318
+ * Nokogiri::XML::Node#inner_html= はノードの中のHTMLをセット出来る
319
+ * NokogiriのBuilderのインタフェースの改良
320
+ * Nokogiri::XML::Node#swap は、現在のノードに新しいhtmlを交換する事が出来る
321
+
322
+
323
+ * バグの修正
324
+
325
+ * BuilderAPIのタグのネスティングを修正 (LH #41)
326
+ * Nokogiri::HTML.fragment はテキストだけのノードを適切に扱う事が出来る(LH #43)
327
+ * Nokogiri::XML::Node#before はテキストノードのはじめに挿入する事が出来る (LH #44)
328
+ * Nokogiri::XML::Node#after はテキストノードの文末に挿入する事が出来る
329
+ * Nokogiri::XML::Node#search 名前空間が自動的に登録されるようになった(LH#42)
330
+ * Nokogiri::XML::NodeSet#search 名前空間が自動的に登録されるようになった
331
+ * Nokogiri::HTML::NamedCharacters はlibxml2に委任
332
+ * Nokogiri::XML::Node#[] はSymbolを使う (LH #48)
333
+ * vasprintf にwindowsを修正 (Geffroy Couprie ありがとう!)
334
+ * Nokogiri::XML::Node#[]= はentityを符号化しない (LH #55)
335
+ * 名前空間はreparentedのノードに模写する (LH #56)
336
+ * StringのエンコードはRuby 1.9での初期設定を使用する
337
+ * Document#dup は新しいドキュメントに同じタイプを作る (LH #59)
338
+ * Document#parent は存在しない (LH #64)
339
+
340
+
341
+ === 1.2.1 / 2009年2月23日
342
+
343
+ * 修正
344
+
345
+ * CSS のセレクターのスペースを修正
346
+ * Ruby 1.9 のStringのエンコードを修正 (角谷さんに感謝!)
347
+
348
+ === 1.2.0 / 2009年2月22日
349
+
350
+ * 新しい機能
351
+ * CSSサーチが CSS3 名前空間クエリをサポートするようになった
352
+ * ルート要素での名前空間が自動的に登録されるようになった
353
+ * CSS クエリが初期設定の名前空間を使うようになった
354
+ * Nokogiri::XML::Document#encoding で文書にエンコードを使用、受け取る
355
+ * Nokogiri::XML::Document#url で文書のURLを受け取る
356
+ * Nokogiri::XML::Node#each はname属性、値を一組にし反復適用する
357
+ * Nokogiri::XML::Node#keys はすべてのname属性を受け取る
358
+ * Nokogiri::XML::Node#line は行番号をノード用に受け取る (Dirkjan Bussinkさんに感謝感激)
359
+ * Nokogiri::XML::Node#serialize は任意されたencodingパラメーターを受け入れる
360
+ * Nokogiri::XML::Node#to_html, to_xml, と to_xhtml は任意されたencodingパラメーターを受け入れる
361
+ * Nokogiri::XML::Node#to_str
362
+ * Nokogiri::XML::Node#to_xhtml でXHTML文書を生成する
363
+ * Nokogiri::XML::Node#values が全ての属性値を受け入れる
364
+ * Nokogiri::XML::Node#write_to は任意されたencodingで要素をIOオブジェクトへ書く
365
+ * Nokogiri::XML::ProcessingInstrunction.new
366
+ * Nokogiri::XML::SAX::PushParser は全てのプッシュパースに必要な解析をする
367
+
368
+ * バグの修正
369
+
370
+ * Nokogiri::XML::Document#dup を修正
371
+ * ヘッダ検知を修正. 謝々るびきちさん!
372
+ * 無効なCSS内にて解析機能を動かなくさせる原因を修正
373
+
374
+ * 廃棄予定
375
+
376
+ * Nokogiri::XML::Node.new_from_str は1.3.0にて廃棄予定
377
+
378
+ * APIの変更
379
+
380
+ * Nokogiri::HTML.fragment は XML::DocumentFragment (LH #32)で返す
381
+
382
+ === 1.1.1
383
+
384
+ * 新しい機能
385
+ * XML::Node#elem? を追加
386
+ * XML::Node#attribute_nodes を追加
387
+ * XML::Attr を追加
388
+ * XML::Node#delete を追加
389
+ * XML::NodeSet#inner_html を追加
390
+
391
+ * バグの修正
392
+
393
+ * HTML のノードを \r のエンティティを含まない
394
+ * CSS::SelectorHandler と XML::XPathHandler を除去
395
+ * XML::Node#attributes が Attr node を value値に返す
396
+ * XML::NodeSet が to_xml へ実行
397
+
398
+ === 1.1.0
399
+
400
+ * 新しい機能
401
+
402
+ * カスタム XPath 機能はある。( Nokogiri::XML::Node#xpath 参照 )
403
+ * カスタム CSS 擬似クラスと機能はある。( Nokogiri::XML::Node#css 参照 )
404
+ * Nokogiri::XML::Node#<< が作成中に子ノードを自動追加
405
+
406
+ * バグの修正
407
+
408
+ * mutex が CSS のキャッシュのアクセスをロックする
409
+ * GCC 3.3.5 のビルドに関する問題を修正
410
+ * XML::Node#to_xml が引数indentationを取る
411
+ * XML::Node#dup が引数任意のdepthを取る
412
+ * XML::Node#add_previous_sibling が新しい兄弟ノードで返す
413
+
414
+ === 1.0.7
415
+
416
+ * バグの修正
417
+
418
+ * Dike 使用時中のメモリーリークの修正
419
+ * SAX パーサーが現在 IO Stream 同時解析
420
+ * コメント nodes が独自のクラスを継承する
421
+ * Nokogiri() は Nokogiri.parse() へデリゲートする
422
+ * ENV['PATH'] に付加せれる代わりに先頭へデータ挿入される
423
+ * 複雑な CSS 内のバグを修正完了 :not selector ではありません
424
+
425
+ === 1.0.6
426
+
427
+ * 5つの修正
428
+
429
+ * XPath のパーサーが SyntaxError を生じさせ解析停止させる
430
+ * CSS のパーサーが SyntaxError を生じさせ解析停止させる
431
+ * filter() と not() hpricot の互換性を追加
432
+ * CSS が Node#search 経由で検索し、常時対応する事が出来るようになった
433
+ * CSS より XPath 変換がキャッシュに入れられるようになった
434
+
435
+ === 1.0.5
436
+
437
+ * バグフィックス
438
+
439
+ * メーリンクリストを作成
440
+ * バグファイルを作成
441
+ * Windows 内で ENV['PATH'] が存在しない場合でも、存在出来るように設定完了
442
+ * Document 内の NodeSet#[] の結果をキャッシュする
443
+
444
+ === 1.0.4
445
+
446
+ * バグフィックス
447
+
448
+ * 弱参照からドキュメント参照へのメモリー管理の変換
449
+ * メモリリークに接続
450
+ * Builderブロックが取り囲んでいるコンテキストから
451
+ メソッドの呼び出しをする事が出来る
452
+
453
+ === 1.0.3
454
+
455
+ * 5つのバグ修正
456
+
457
+ * NodeSet が to_ary へ実行
458
+ * XML::Document#parent を除去
459
+ * GCバグ修正済み (Mike は最高!)
460
+ * 1.8.5互換性の為の RARRAY_LEN 除去
461
+ * inner_html 修正済み (Yahuda に感謝)
462
+
463
+ === 1.0.2
464
+
465
+ * 1つのバグ修正
466
+
467
+ * extconf.rb は frex や racc を調べないはず
468
+
469
+ === 1.0.1
470
+
471
+ * 1つのバグ修正
472
+
473
+ * extconf.rb が libdir や prefix を検索しない事を確認済み
474
+ それによって、ports libxml/ruby が正しくリンクする (lucsky に感謝!)
475
+
476
+ === 1.0.0 / 2008-07-13
477
+
478
+ * 1つの偉大な増進
479
+
480
+ * ご誕生である