search_biomodel 0.1.2 → 1.0.0

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Files changed (1059) hide show
  1. data/Gemfile +1 -2
  2. data/Gemfile.lock +17 -3
  3. data/README.rdoc +9 -2
  4. data/VERSION +1 -1
  5. data/lib/search_biomodel.rb +11 -8
  6. data/search_biomodel.gemspec +1055 -9
  7. data/search_biomodel/ruby/1.8/bin/jeweler +19 -0
  8. data/search_biomodel/ruby/1.8/bin/nokogiri +19 -0
  9. data/search_biomodel/ruby/1.8/bin/rackup +19 -0
  10. data/search_biomodel/ruby/1.8/bin/rake +19 -0
  11. data/search_biomodel/ruby/1.8/bin/rcov +19 -0
  12. data/search_biomodel/ruby/1.8/cache/builder-3.0.0.gem +0 -0
  13. data/search_biomodel/ruby/1.8/cache/git-1.2.5.gem +0 -0
  14. data/search_biomodel/ruby/1.8/cache/gyoku-0.4.4.gem +0 -0
  15. data/search_biomodel/ruby/1.8/cache/httpi-0.9.4.gem +0 -0
  16. data/search_biomodel/ruby/1.8/cache/jeweler-1.6.2.gem +0 -0
  17. data/search_biomodel/ruby/1.8/cache/nokogiri-1.4.6.gem +0 -0
  18. data/search_biomodel/ruby/1.8/cache/nori-1.0.1.gem +0 -0
  19. data/search_biomodel/ruby/1.8/cache/pyu-ntlm-http-0.1.3.1.gem +0 -0
  20. data/search_biomodel/ruby/1.8/cache/rack-1.3.0.gem +0 -0
  21. data/search_biomodel/ruby/1.8/cache/rake-0.9.2.gem +0 -0
  22. data/search_biomodel/ruby/1.8/cache/rcov-0.9.9.gem +0 -0
  23. data/search_biomodel/ruby/1.8/cache/savon-0.9.2.gem +0 -0
  24. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/CHANGES +89 -0
  25. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/README +229 -0
  26. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/README.rdoc +232 -0
  27. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/Rakefile +296 -0
  28. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/TAGS +55364 -0
  29. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/blankslate.rb +109 -0
  30. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder.rb +13 -0
  31. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/blankslate.rb +23 -0
  32. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/xchar.rb +197 -0
  33. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/xmlbase.rb +160 -0
  34. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/xmlevents.rb +63 -0
  35. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/xmlmarkup.rb +334 -0
  36. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/performance.rb +40 -0
  37. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/preload.rb +39 -0
  38. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_blankslate.rb +225 -0
  39. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_cssbuilder.rb +125 -0
  40. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_eventbuilder.rb +150 -0
  41. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_markupbuilder.rb +546 -0
  42. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_namecollision.rb +39 -0
  43. data/search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_xchar.rb +77 -0
  44. data/search_biomodel/ruby/1.8/gems/git-1.2.5/README +240 -0
  45. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git.rb +156 -0
  46. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/author.rb +14 -0
  47. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/base.rb +479 -0
  48. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/branch.rb +104 -0
  49. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/branches.rb +48 -0
  50. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/diff.rb +146 -0
  51. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/index.rb +5 -0
  52. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/lib.rb +719 -0
  53. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/log.rb +117 -0
  54. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/object.rb +273 -0
  55. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/path.rb +27 -0
  56. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/remote.rb +40 -0
  57. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/repository.rb +4 -0
  58. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/stash.rb +27 -0
  59. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/stashes.rb +44 -0
  60. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/status.rb +110 -0
  61. data/search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/working_directory.rb +4 -0
  62. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/.gemtest +0 -0
  63. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/.gitignore +9 -0
  64. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/.rspec +1 -0
  65. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/.travis.yml +7 -0
  66. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/CHANGELOG.md +55 -0
  67. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/Gemfile +2 -0
  68. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/LICENSE +20 -0
  69. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/README.md +81 -0
  70. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/Rakefile +11 -0
  71. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/gyoku.gemspec +26 -0
  72. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku.rb +23 -0
  73. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/array.rb +45 -0
  74. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/core_ext/string.rb +19 -0
  75. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/hash.rb +55 -0
  76. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/version.rb +5 -0
  77. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/xml_key.rb +63 -0
  78. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/xml_value.rb +28 -0
  79. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/array_spec.rb +53 -0
  80. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/core_ext/string_spec.rb +17 -0
  81. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/hash_spec.rb +160 -0
  82. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/xml_key_spec.rb +77 -0
  83. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/xml_value_spec.rb +49 -0
  84. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku_spec.rb +46 -0
  85. data/search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/spec_helper.rb +2 -0
  86. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/.autotest +5 -0
  87. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/.gemtest +0 -0
  88. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/.gitignore +9 -0
  89. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/.rspec +1 -0
  90. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/.travis.yml +7 -0
  91. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/CHANGELOG.md +60 -0
  92. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/Gemfile +8 -0
  93. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/LICENSE +20 -0
  94. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/README.md +223 -0
  95. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/Rakefile +18 -0
  96. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/autotest/discover.rb +1 -0
  97. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/httpi.gemspec +28 -0
  98. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi.rb +198 -0
  99. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/adapter.rb +67 -0
  100. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/adapter/curb.rb +125 -0
  101. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/adapter/httpclient.rb +98 -0
  102. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/adapter/net_http.rb +117 -0
  103. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/auth/config.rb +81 -0
  104. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/auth/ssl.rb +91 -0
  105. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/dime.rb +56 -0
  106. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/request.rb +90 -0
  107. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/response.rb +85 -0
  108. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/version.rb +5 -0
  109. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/attachment.gif +0 -0
  110. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/client_cert.pem +16 -0
  111. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/client_key.pem +15 -0
  112. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/xml.gz +0 -0
  113. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/xml.xml +10 -0
  114. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/xml_dime.dime +0 -0
  115. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/xml_dime.xml +1 -0
  116. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/adapter/curb_spec.rb +232 -0
  117. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/adapter/httpclient_spec.rb +164 -0
  118. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/adapter/net_http_spec.rb +142 -0
  119. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/adapter_spec.rb +55 -0
  120. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/auth/config_spec.rb +117 -0
  121. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/auth/ssl_spec.rb +128 -0
  122. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/httpi_spec.rb +284 -0
  123. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/request_spec.rb +135 -0
  124. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/response_spec.rb +125 -0
  125. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/integration/request_spec.rb +95 -0
  126. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/integration/server.rb +39 -0
  127. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/spec_helper.rb +12 -0
  128. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/support/fixture.rb +27 -0
  129. data/search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/support/matchers.rb +19 -0
  130. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/.document +8 -0
  131. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/ChangeLog.markdown +166 -0
  132. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/Gemfile +22 -0
  133. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/Gemfile.lock +59 -0
  134. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/LICENSE.txt +20 -0
  135. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/README.markdown +216 -0
  136. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/Rakefile +81 -0
  137. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/bin/jeweler +5 -0
  138. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/cucumber.feature +103 -0
  139. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/directory_layout.feature +86 -0
  140. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/dotdocument.feature +13 -0
  141. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/env_options.feature +9 -0
  142. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/gemfile.feature +71 -0
  143. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/git.feature +102 -0
  144. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/license.feature +20 -0
  145. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/rakefile.feature +158 -0
  146. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/readme.feature +12 -0
  147. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/test.feature +54 -0
  148. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/test_helper.feature +149 -0
  149. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/placeholder.feature +5 -0
  150. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/step_definitions/debug_steps.rb +6 -0
  151. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/step_definitions/filesystem_steps.rb +70 -0
  152. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/step_definitions/generator_steps.rb +382 -0
  153. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/step_definitions/task_steps.rb +6 -0
  154. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/support/env.rb +42 -0
  155. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/tasks/build_gem.feature +9 -0
  156. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/tasks/version.feature +31 -0
  157. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/tasks/version_bumping.feature +49 -0
  158. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/jeweler.gemspec +244 -0
  159. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler.rb +177 -0
  160. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands.rb +20 -0
  161. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/build_gem.rb +36 -0
  162. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/check_dependencies.rb +50 -0
  163. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/install_gem.rb +31 -0
  164. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/release_gemspec.rb +82 -0
  165. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/release_to_git.rb +59 -0
  166. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/release_to_rubygems.rb +28 -0
  167. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/validate_gemspec.rb +30 -0
  168. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/version/base.rb +55 -0
  169. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/version/bump_major.rb +13 -0
  170. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/version/bump_minor.rb +12 -0
  171. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/version/bump_patch.rb +14 -0
  172. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/version/write.rb +12 -0
  173. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/write_gemspec.rb +39 -0
  174. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/errors.rb +8 -0
  175. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/gemcutter_tasks.rb +8 -0
  176. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/gemspec_helper.rb +87 -0
  177. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator.rb +287 -0
  178. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/application.rb +61 -0
  179. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/bacon_mixin.rb +43 -0
  180. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/github_mixin.rb +29 -0
  181. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/micronaut_mixin.rb +41 -0
  182. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/minitest_mixin.rb +42 -0
  183. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/options.rb +162 -0
  184. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/rdoc_mixin.rb +9 -0
  185. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/riot_mixin.rb +42 -0
  186. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/rspec_mixin.rb +42 -0
  187. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/shindo_mixin.rb +44 -0
  188. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/shoulda_mixin.rb +42 -0
  189. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/testspec_mixin.rb +42 -0
  190. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/testunit_mixin.rb +39 -0
  191. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/generator/yard_mixin.rb +14 -0
  192. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/rubyforge_tasks.rb +95 -0
  193. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/rubygems_dot_org_tasks.rb +38 -0
  194. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/rubygems_tasks.rb +38 -0
  195. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/specification.rb +110 -0
  196. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/tasks.rb +224 -0
  197. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/.document +5 -0
  198. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/.gitignore +48 -0
  199. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/Gemfile +12 -0
  200. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/LICENSE.txt +20 -0
  201. data/search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/templates/README.rdoc +19 -0
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  911. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_task_manager_argument_resolution.rb +36 -0
  912. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_task_with_arguments.rb +162 -0
  913. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_test_task.rb +122 -0
  914. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_top_level_functions.rb +76 -0
  915. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_rake_win32.rb +83 -0
  916. data/search_biomodel/ruby/1.8/gems/rake-0.9.2/test/test_sys.rb +20 -0
  917. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/BLURB +111 -0
  918. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/LICENSE +53 -0
  919. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/Rakefile +103 -0
  920. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/THANKS +110 -0
  921. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/bin/rcov +522 -0
  922. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/editor-extensions/rcov.el +131 -0
  923. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/editor-extensions/rcov.vim +38 -0
  924. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/1.8/callsite.c +216 -0
  925. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/1.8/rcovrt.c +294 -0
  926. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/1.9/callsite.c +234 -0
  927. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/1.9/rcovrt.c +264 -0
  928. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/Makefile +157 -0
  929. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/callsite.o +0 -0
  930. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/extconf.rb +21 -0
  931. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/rcovrt.o +0 -0
  932. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/ext/rcovrt/rcovrt.so +0 -0
  933. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov.rb +33 -0
  934. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/call_site_analyzer.rb +225 -0
  935. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/code_coverage_analyzer.rb +271 -0
  936. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/coverage_info.rb +36 -0
  937. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/differential_analyzer.rb +116 -0
  938. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/file_statistics.rb +355 -0
  939. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters.rb +13 -0
  940. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/base_formatter.rb +174 -0
  941. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/failure_report.rb +15 -0
  942. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/full_text_report.rb +48 -0
  943. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/html_coverage.rb +274 -0
  944. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/html_erb_template.rb +62 -0
  945. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/text_coverage_diff.rb +193 -0
  946. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/text_report.rb +32 -0
  947. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/formatters/text_summary.rb +11 -0
  948. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/lowlevel.rb +146 -0
  949. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/rcovtask.rb +156 -0
  950. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/detail.html.erb +64 -0
  951. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/index.html.erb +93 -0
  952. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/jquery-1.3.2.min.js +19 -0
  953. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/jquery.tablesorter.min.js +15 -0
  954. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/print.css +12 -0
  955. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/rcov.js +42 -0
  956. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/templates/screen.css +270 -0
  957. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcov/version.rb +10 -0
  958. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/lib/rcovrt.so +0 -0
  959. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/setup.rb +1588 -0
  960. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_01.rb +7 -0
  961. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_02.rb +5 -0
  962. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_03.rb +20 -0
  963. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_04.rb +10 -0
  964. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_05-new.rb +17 -0
  965. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_05-old.rb +13 -0
  966. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_05.rb +17 -0
  967. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/assets/sample_06.rb +8 -0
  968. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/call_site_analyzer_test.rb +171 -0
  969. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/code_coverage_analyzer_test.rb +220 -0
  970. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/diff-gcc-all.out +7 -0
  971. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/diff-gcc-diff.out +11 -0
  972. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/diff-gcc-original.out +5 -0
  973. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/diff-no-color.out +12 -0
  974. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/diff.out +12 -0
  975. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/gcc-text.out +10 -0
  976. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/sample_03_rb.html +651 -0
  977. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/sample_03_rb.rb +28 -0
  978. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/expected_coverage/sample_04_rb.html +641 -0
  979. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/file_statistics_test.rb +471 -0
  980. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/functional_test.rb +91 -0
  981. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/test_helper.rb +4 -0
  982. data/search_biomodel/ruby/1.8/gems/rcov-0.9.9/test/turn_off_rcovrt.rb +4 -0
  983. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/.gitignore +9 -0
  984. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/.rspec +1 -0
  985. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/.travis.yml +7 -0
  986. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/.yardopts +2 -0
  987. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/CHANGELOG.md +533 -0
  988. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/Gemfile +4 -0
  989. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/LICENSE +20 -0
  990. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/README.md +39 -0
  991. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/Rakefile +40 -0
  992. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon.rb +14 -0
  993. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/client.rb +161 -0
  994. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/core_ext/hash.rb +70 -0
  995. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/core_ext/object.rb +14 -0
  996. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/core_ext/string.rb +51 -0
  997. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/core_ext/time.rb +22 -0
  998. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/error.rb +6 -0
  999. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/global.rb +83 -0
  1000. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/http/error.rb +42 -0
  1001. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/soap.rb +24 -0
  1002. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/soap/fault.rb +59 -0
  1003. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/soap/request.rb +61 -0
  1004. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/soap/response.rb +85 -0
  1005. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/soap/xml.rb +184 -0
  1006. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/version.rb +5 -0
  1007. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/wsdl/document.rb +112 -0
  1008. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/wsdl/parser.rb +96 -0
  1009. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/wsdl/request.rb +35 -0
  1010. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/lib/savon/wsse.rb +156 -0
  1011. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/savon.gemspec +30 -0
  1012. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/gzip/message.gz +0 -0
  1013. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/another_soap_fault.xml +14 -0
  1014. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/authentication.xml +14 -0
  1015. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/header.xml +13 -0
  1016. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/list.xml +18 -0
  1017. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/multi_ref.xml +39 -0
  1018. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/soap_fault.xml +8 -0
  1019. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/response/soap_fault12.xml +18 -0
  1020. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/wsdl/authentication.xml +63 -0
  1021. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/wsdl/geotrust.xml +156 -0
  1022. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/wsdl/namespaced_actions.xml +307 -0
  1023. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/wsdl/no_namespace.xml +115 -0
  1024. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/wsdl/soap12.xml +11 -0
  1025. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/fixtures/wsdl/two_bindings.xml +25 -0
  1026. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/client_spec.rb +354 -0
  1027. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/core_ext/hash_spec.rb +121 -0
  1028. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/core_ext/object_spec.rb +19 -0
  1029. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/core_ext/string_spec.rb +57 -0
  1030. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/core_ext/time_spec.rb +13 -0
  1031. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/http/error_spec.rb +52 -0
  1032. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/savon_spec.rb +85 -0
  1033. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/soap/fault_spec.rb +89 -0
  1034. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/soap/request_spec.rb +45 -0
  1035. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/soap/response_spec.rb +181 -0
  1036. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/soap/xml_spec.rb +341 -0
  1037. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/soap_spec.rb +21 -0
  1038. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/wsdl/document_spec.rb +132 -0
  1039. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/wsdl/parser_spec.rb +107 -0
  1040. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/wsdl/request_spec.rb +15 -0
  1041. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/wsse_spec.rb +232 -0
  1042. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/spec_helper.rb +14 -0
  1043. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/support/endpoint.rb +25 -0
  1044. data/search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/support/fixture.rb +37 -0
  1045. data/search_biomodel/ruby/1.8/specifications/builder-3.0.0.gemspec +36 -0
  1046. data/search_biomodel/ruby/1.8/specifications/git-1.2.5.gemspec +30 -0
  1047. data/search_biomodel/ruby/1.8/specifications/gyoku-0.4.4.gemspec +41 -0
  1048. data/search_biomodel/ruby/1.8/specifications/httpi-0.9.4.gemspec +49 -0
  1049. data/search_biomodel/ruby/1.8/specifications/jeweler-1.6.2.gemspec +79 -0
  1050. data/search_biomodel/ruby/1.8/specifications/nokogiri-1.4.6.gemspec +53 -0
  1051. data/search_biomodel/ruby/1.8/specifications/nori-1.0.1.gemspec +38 -0
  1052. data/search_biomodel/ruby/1.8/specifications/pyu-ntlm-http-0.1.3.1.gemspec +31 -0
  1053. data/search_biomodel/ruby/1.8/specifications/rack-1.3.0.gemspec +57 -0
  1054. data/search_biomodel/ruby/1.8/specifications/rake-0.9.2.gemspec +43 -0
  1055. data/search_biomodel/ruby/1.8/specifications/rcov-0.9.9.gemspec +34 -0
  1056. data/search_biomodel/ruby/1.8/specifications/savon-0.9.2.gemspec +55 -0
  1057. data/test/test_search_biomodel.rb +29 -4
  1058. metadata +1071 -36
  1059. data/test.rb +0 -1
@@ -0,0 +1,141 @@
1
+ require 'rack/mock'
2
+ require File.expand_path('../testrequest', __FILE__)
3
+
4
+ Thread.abort_on_exception = true
5
+
6
+ describe Rack::Handler::WEBrick do
7
+ extend TestRequest::Helpers
8
+
9
+ @server = WEBrick::HTTPServer.new(:Host => @host='0.0.0.0',
10
+ :Port => @port=9202,
11
+ :Logger => WEBrick::Log.new(nil, WEBrick::BasicLog::WARN),
12
+ :AccessLog => [])
13
+ @server.mount "/test", Rack::Handler::WEBrick,
14
+ Rack::Lint.new(TestRequest.new)
15
+ Thread.new { @server.start }
16
+ trap(:INT) { @server.shutdown }
17
+
18
+ should "respond" do
19
+ lambda {
20
+ GET("/test")
21
+ }.should.not.raise
22
+ end
23
+
24
+ should "be a WEBrick" do
25
+ GET("/test")
26
+ status.should.equal 200
27
+ response["SERVER_SOFTWARE"].should =~ /WEBrick/
28
+ response["HTTP_VERSION"].should.equal "HTTP/1.1"
29
+ response["SERVER_PROTOCOL"].should.equal "HTTP/1.1"
30
+ response["SERVER_PORT"].should.equal "9202"
31
+ response["SERVER_NAME"].should.equal "0.0.0.0"
32
+ end
33
+
34
+ should "have rack headers" do
35
+ GET("/test")
36
+ response["rack.version"].should.equal [1,1]
37
+ response["rack.multithread"].should.be.true
38
+ response["rack.multiprocess"].should.be.false
39
+ response["rack.run_once"].should.be.false
40
+ end
41
+
42
+ should "have CGI headers on GET" do
43
+ GET("/test")
44
+ response["REQUEST_METHOD"].should.equal "GET"
45
+ response["SCRIPT_NAME"].should.equal "/test"
46
+ response["REQUEST_PATH"].should.equal "/test"
47
+ response["PATH_INFO"].should.be.equal ""
48
+ response["QUERY_STRING"].should.equal ""
49
+ response["test.postdata"].should.equal ""
50
+
51
+ GET("/test/foo?quux=1")
52
+ response["REQUEST_METHOD"].should.equal "GET"
53
+ response["SCRIPT_NAME"].should.equal "/test"
54
+ response["REQUEST_PATH"].should.equal "/test/foo"
55
+ response["PATH_INFO"].should.equal "/foo"
56
+ response["QUERY_STRING"].should.equal "quux=1"
57
+
58
+ GET("/test/foo%25encoding?quux=1")
59
+ response["REQUEST_METHOD"].should.equal "GET"
60
+ response["SCRIPT_NAME"].should.equal "/test"
61
+ response["REQUEST_PATH"].should.equal "/test/foo%25encoding"
62
+ response["PATH_INFO"].should.equal "/foo%25encoding"
63
+ response["QUERY_STRING"].should.equal "quux=1"
64
+ end
65
+
66
+ should "have CGI headers on POST" do
67
+ POST("/test", {"rack-form-data" => "23"}, {'X-test-header' => '42'})
68
+ status.should.equal 200
69
+ response["REQUEST_METHOD"].should.equal "POST"
70
+ response["SCRIPT_NAME"].should.equal "/test"
71
+ response["REQUEST_PATH"].should.equal "/test"
72
+ response["PATH_INFO"].should.equal ""
73
+ response["QUERY_STRING"].should.equal ""
74
+ response["HTTP_X_TEST_HEADER"].should.equal "42"
75
+ response["test.postdata"].should.equal "rack-form-data=23"
76
+ end
77
+
78
+ should "support HTTP auth" do
79
+ GET("/test", {:user => "ruth", :passwd => "secret"})
80
+ response["HTTP_AUTHORIZATION"].should.equal "Basic cnV0aDpzZWNyZXQ="
81
+ end
82
+
83
+ should "set status" do
84
+ GET("/test?secret")
85
+ status.should.equal 403
86
+ response["rack.url_scheme"].should.equal "http"
87
+ end
88
+
89
+ should "correctly set cookies" do
90
+ @server.mount "/cookie-test", Rack::Handler::WEBrick,
91
+ Rack::Lint.new(lambda { |req|
92
+ res = Rack::Response.new
93
+ res.set_cookie "one", "1"
94
+ res.set_cookie "two", "2"
95
+ res.finish
96
+ })
97
+
98
+ Net::HTTP.start(@host, @port) { |http|
99
+ res = http.get("/cookie-test")
100
+ res.code.to_i.should.equal 200
101
+ res.get_fields("set-cookie").should.equal ["one=1", "two=2"]
102
+ }
103
+ end
104
+
105
+ should "provide a .run" do
106
+ block_ran = false
107
+ catch(:done) {
108
+ Rack::Handler::WEBrick.run(lambda {},
109
+ {:Port => 9210,
110
+ :Logger => WEBrick::Log.new(nil, WEBrick::BasicLog::WARN),
111
+ :AccessLog => []}) { |server|
112
+ block_ran = true
113
+ server.should.be.kind_of WEBrick::HTTPServer
114
+ @s = server
115
+ throw :done
116
+ }
117
+ }
118
+ block_ran.should.be.true
119
+ @s.shutdown
120
+ end
121
+
122
+ should "return repeated headers" do
123
+ @server.mount "/headers", Rack::Handler::WEBrick,
124
+ Rack::Lint.new(lambda { |req|
125
+ [
126
+ 401,
127
+ { "Content-Type" => "text/plain",
128
+ "WWW-Authenticate" => "Bar realm=X\nBaz realm=Y" },
129
+ [""]
130
+ ]
131
+ })
132
+
133
+ Net::HTTP.start(@host, @port) { |http|
134
+ res = http.get("/headers")
135
+ res.code.to_i.should.equal 401
136
+ res["www-authenticate"].should.equal "Bar realm=X, Baz realm=Y"
137
+ }
138
+ end
139
+
140
+ @server.shutdown
141
+ end
@@ -0,0 +1,78 @@
1
+ require 'yaml'
2
+ require 'net/http'
3
+ require 'rack/lint'
4
+
5
+ class TestRequest
6
+ NOSERIALIZE = [Method, Proc, Rack::Lint::InputWrapper]
7
+
8
+ def call(env)
9
+ status = env["QUERY_STRING"] =~ /secret/ ? 403 : 200
10
+ env["test.postdata"] = env["rack.input"].read
11
+ minienv = env.dup
12
+ # This may in the future want to replace with a dummy value instead.
13
+ minienv.delete_if { |k,v| NOSERIALIZE.any? { |c| v.kind_of?(c) } }
14
+ body = minienv.to_yaml
15
+ size = body.respond_to?(:bytesize) ? body.bytesize : body.size
16
+ [status, {"Content-Type" => "text/yaml", "Content-Length" => size.to_s}, [body]]
17
+ end
18
+
19
+ module Helpers
20
+ attr_reader :status, :response
21
+
22
+ ROOT = File.expand_path(File.dirname(__FILE__) + "/..")
23
+ ENV["RUBYOPT"] = "-I#{ROOT}/lib -rubygems"
24
+
25
+ def root
26
+ ROOT
27
+ end
28
+
29
+ def rackup
30
+ "#{ROOT}/bin/rackup"
31
+ end
32
+
33
+ def GET(path, header={})
34
+ Net::HTTP.start(@host, @port) { |http|
35
+ user = header.delete(:user)
36
+ passwd = header.delete(:passwd)
37
+
38
+ get = Net::HTTP::Get.new(path, header)
39
+ get.basic_auth user, passwd if user && passwd
40
+ http.request(get) { |response|
41
+ @status = response.code.to_i
42
+ begin
43
+ @response = YAML.load(response.body)
44
+ rescue TypeError, ArgumentError
45
+ @response = nil
46
+ end
47
+ }
48
+ }
49
+ end
50
+
51
+ def POST(path, formdata={}, header={})
52
+ Net::HTTP.start(@host, @port) { |http|
53
+ user = header.delete(:user)
54
+ passwd = header.delete(:passwd)
55
+
56
+ post = Net::HTTP::Post.new(path, header)
57
+ post.form_data = formdata
58
+ post.basic_auth user, passwd if user && passwd
59
+ http.request(post) { |response|
60
+ @status = response.code.to_i
61
+ @response = YAML.load(response.body)
62
+ }
63
+ }
64
+ end
65
+ end
66
+ end
67
+
68
+ class StreamingRequest
69
+ def self.call(env)
70
+ [200, {"Content-Type" => "text/plain"}, new]
71
+ end
72
+
73
+ def each
74
+ yield "hello there!\n"
75
+ sleep 5
76
+ yield "that is all.\n"
77
+ end
78
+ end
@@ -0,0 +1,7 @@
1
+ module Rack
2
+ module Handler
3
+ # this class doesn't do anything, we're just seeing if we get it.
4
+ class Unregistered
5
+ end
6
+ end
7
+ end
@@ -0,0 +1,7 @@
1
+ module Rack
2
+ module Handler
3
+ # this class doesn't do anything, we're just seeing if we get it.
4
+ class UnregisteredLongOne
5
+ end
6
+ end
7
+ end
@@ -0,0 +1,509 @@
1
+ = Rake Changelog
2
+
3
+ == Version 0.9.1
4
+
5
+ * Added deprecation warnings to the Rake DSL methods.
6
+
7
+ == Version 0.9.0
8
+
9
+ * *Incompatible* *change*: Rake DSL commands ('task', 'file', etc.) are
10
+ no longer private methods in Object. If you need to call 'task :xzy' inside
11
+ your class, include Rake::DSL into the class. The DSL is still available at
12
+ the top level scope (via the top level object which extends Rake::DSL).
13
+
14
+ * Rake now warns when the deprecated :needs syntax used.
15
+
16
+ * Rake history is now UTF-8 encoded.
17
+
18
+ * Rake now uses case-insensitive comparisons to find the Rakefile on Windows.
19
+ Based on patch by Roger Pack.
20
+
21
+ * Rake now requires (instead of loads) files in the test task. Patch by Cezary
22
+ Baginski.
23
+
24
+ * Fixed typos. Patches by Sean Scot August Moon and R.T. Lechow.
25
+
26
+ * Rake now prints the Rakefile directory only when it's different from the
27
+ current directory. Patch by Alex Chaffee.
28
+
29
+ * Improved rakefile_location discovery on Windows. Patch by James Tucker.
30
+
31
+ * Rake now recognizes "Windows Server" as a windows system. Patch by Matthias
32
+ Lüdtke
33
+
34
+ * Rake::RDocTask is deprecated. Use RDoc::Task from RDoc 2.4.2+ (require
35
+ 'rdoc/task')
36
+
37
+ * Rake::GemPackageTask is deprecated. Use Gem::PackageTask (require
38
+ 'rubygems/package_task')
39
+
40
+ * Rake now outputs various messages to $stderr instead of $stdout.
41
+
42
+ * Rake no longer emits warnings for Config. Patch by Santiago Pastorino.
43
+
44
+ * Split rake.rb into individual files.
45
+
46
+ * Support for the --where (-W) flag for showing where a task is defined.
47
+
48
+ * Fixed quoting in test task.
49
+ (http://onestepback.org/redmine/issues/show/44,
50
+ http://www.pivotaltracker.com/story/show/1223138)
51
+
52
+ * Fixed the silent option parsing problem.
53
+ (http://onestepback.org/redmine/issues/show/47)
54
+
55
+ * Fixed :verbose=>false flag on sh and ruby commands.
56
+
57
+ * Rake command line options may be given by default in a RAKEOPT
58
+ environment variable.
59
+
60
+ * Errors in Rake will now display the task invocation chain in effect
61
+ at the time of the error.
62
+
63
+ * Accepted change by warnickr to not expand test patterns in shell
64
+ (allowing more files in the test suite).
65
+
66
+ * Fixed that file tasks did not perform prereq lookups in scope
67
+ (Redmine #57).
68
+
69
+ == Version 0.8.7
70
+
71
+ * Fixed EXEEXT for JRuby on windows.
72
+
73
+ == Version 0.8.6
74
+
75
+ * Minor fixes to the RDoc generation (removed dependency on darkfish
76
+ and removed inline source option).
77
+
78
+ == PreVersion 0.8.6
79
+
80
+ * Now allow # comments to comment a task definition.
81
+
82
+ == Version 0.8.5
83
+
84
+ * Better support for the system command on Windows.
85
+
86
+ == Version 0.8.4
87
+
88
+ * Preserve case when locating rakefiles (patch from James
89
+ M. Lawrence/quix)
90
+
91
+ * Better support for windows paths in the test task (patch from Simon
92
+ Chiang/bahuvrihi)
93
+
94
+ * Windows system dir search order is now: HOME, HOMEDRIVE + HOMEPATH,
95
+ APPDATA, USERPROFILE (patch from Luis Lavena)
96
+
97
+ * MingGW is now recognized as a windows platform. (patch from Luis
98
+ Lavena)
99
+
100
+ * Numerous fixes to the windows test suite (patch from Luis Lavena).
101
+
102
+ * Improved Rakefile case insensitivity testing (patch from Luis
103
+ Lavena).
104
+
105
+ * Fixed stray ARGV option problem that was interfering with
106
+ Test::Unit::Runner.
107
+
108
+ * Fixed default verbose mode (was accidently changed to false).
109
+
110
+ * Removed reference to manage_gem to fix the warning produced by the
111
+ gem package task.
112
+
113
+ == Version 0.8.3
114
+
115
+ * Enhanced the system directory detection in windows. We now check
116
+ HOMEDRIVE/HOMEPATH and USERPROFILE if APPDATA isn't found. (Patch
117
+ supplied by James Tucker). Rake no long aborts if it can't find the
118
+ directory.
119
+
120
+ * Added fix to handle ruby installations in directories with spaces in
121
+ their name.
122
+
123
+ == Version 0.8.2
124
+
125
+ * Fixed bug in package task so that it will include the subdir
126
+ directory in the package for testing. (Bug found by Adam Majer)
127
+
128
+ * Added ENV var to rakefile to prevent OS X from including extended
129
+ attribute junk in a tar file. (Bug found by Adam Majer)
130
+
131
+ * Fixed filename dependency order bug in test_inspect_pending and
132
+ test_to_s_pending. (Bug found by Adam Majer)
133
+
134
+ * Fixed check for file utils options to make them immune to the
135
+ symbol/string differences. (Patch supplied by Edwin Pratomo)
136
+
137
+ * Fixed bug with rules involving multiple source (Patch supplied by
138
+ Emanuel Indermühle)
139
+
140
+ * Switched from getoptlong to optparse (patches supplied by Edwin
141
+ Pratomo)
142
+
143
+ * The -T option will now attempt to dynamically sense the size of the
144
+ terminal. RAKE_COLUMNS will override any dynamic sensing.
145
+
146
+ * FileList#clone and FileList#dup have better sematics w.r.t. taint
147
+ and freeze.
148
+
149
+ * Added ability clear prerequisites, and/or actions from an existing
150
+ task.
151
+
152
+ * Added the ability to reenable a task to be invoked a second time.
153
+
154
+ * Changed RDoc test task to have no default template. This makes it
155
+ easier for the tempate to pick up the template from the environment.
156
+
157
+ * Changed from using Mutex to Monitor. Evidently Mutex causes thread
158
+ join errors when Ruby is compiled with -disable-pthreads. (Patch
159
+ supplied by Ittay Dror)
160
+
161
+ * Fixed bug in makefile parser that had problems with extra spaces in
162
+ file task names. (Patch supplied by Ittay Dror)
163
+
164
+ * Added a performance patch for reading large makefile dependency
165
+ files. (Patch supplied by Ittay Dror)
166
+
167
+ * Default values for task arguments can easily be specified with the
168
+ :with_defaults method. (Idea for default argument merging supplied
169
+ by (Adam Q. Salter)
170
+
171
+ * The -T output will only self-truncate if the output is a tty.
172
+ However, if RAKE_COLUMNS is explicitly set, it will be honored in
173
+ any case. (Patch provided by Gavin Stark).
174
+
175
+ * Numerous fixes for running under windows. A big thanks to Bheeshmar
176
+ Redheendran for spending a good part of the afternoon at the
177
+ Lonestar Ruby Conference to help me work out these issues.
178
+
179
+ == Version 0.8.1
180
+
181
+ * Removed requires on parsedate.rb (in Ftptools)
182
+ * Removed ftools from rake.rb. Made it options in sys.rb
183
+
184
+ == Version 0.8.0
185
+
186
+ * Added task parameters (e.g. "rake build[version7]")
187
+ * Made task parameters passable to prerequisites.
188
+ * Comments are limited to 80 columns or so (suggested by Jamis Buck).
189
+ * Added -D to display full comments (suggested by Jamis Buck).
190
+ * The rake program will set the status value used in any explicit
191
+ exit(n) calls. (patch provided by Stephen Touset)
192
+ * Fixed error in functional tests that were not including session (and
193
+ silently skipping the functionl tests.
194
+ * Removed --usage and make -h the same as -H.
195
+ * Make a prettier inspect for tasks.
196
+
197
+ == Version 0.7.3
198
+
199
+ * Added existing and existing! methods to FileList
200
+ * FileLists now claim to be Arrays (via is_a?) to get better support
201
+ from the FileUtil module.
202
+ * Added init and top_level for custom rake applications.
203
+
204
+ == Version 0.7.2
205
+
206
+ * Error messages are now send to stderr rather than stdout (from
207
+ Payton Quackenbush).
208
+ * Better error handling on invalid command line arguments (from Payton
209
+ Quackenbush).
210
+ * Added rcov task and updated unit testing for better code coverage.
211
+ * Fixed some bugs where the application object was going to the global
212
+ appliation instead of using its own data.
213
+ * Added square and curly bracket patterns to FileList#include (Tilman
214
+ Sauerbeck).
215
+ * Added plain filename support to rule dependents (suggested by Nobu
216
+ Nakada).
217
+ * Added pathmap support to rule dependents.
218
+ * Added a 'tasks' method to a namespace to get a list of tasks
219
+ associated with the namespace.
220
+ * Fixed the method name leak from FileUtils (bug found by Glenn
221
+ Vanderburg).
222
+ * Added rake_extension to handle detection of extension collisions.
223
+ * Added test for noop, bad_option and verbose flags to sh command.
224
+ * Removed dependency on internal fu_xxx functions from FileUtils.
225
+ * Added a 'shame' task to the Rakefile.
226
+ * Added tar_command and zip_command options to the Package task.
227
+ * Added a description to the gem task in GemPackageTask.
228
+ * Fixed a bug when rules have multiple prerequisites (patch by Joel
229
+ VanderWerf)
230
+ * Added a protected 'require "rubygems"' to test/test_application to
231
+ unbreak cruisecontrol.rb.
232
+ * Added the handful of RakeFileUtils to the private method as well.
233
+ * Added block based exclusion.
234
+ * The clean task will no longer delete 'core' if it is a directory.
235
+ * Removed rake_dup. Now we just simply rescue a bad dup.
236
+ * Refactored the FileList reject logic to remove duplication.
237
+ * Removed if __FILE__ at the end of the rake.rb file.
238
+
239
+ == Version 0.7.1
240
+
241
+ * Added optional filter parameter to the --tasks command line option.
242
+ * Added flatten to allow rule transform procs to return lists of
243
+ prereqs (Joel VanderWerf provided patch).
244
+ * Added pathmap to String and FileList.
245
+ * The -r option will now load .rake files (but a straight require
246
+ doesn't yet). NOTE: This is experimental ... it may be
247
+ discontinued.
248
+ * The -f option without a value will disable the search for a
249
+ Rakefile. The assumption is that the -r files are adequate.
250
+ * Fixed the safe_ln function to fall back to cp in more error
251
+ scenarios.
252
+
253
+ == Version 0.7.0
254
+
255
+ * Added Rake.original_dir to return the original starting directory of
256
+ the rake application.
257
+ * Added safe_ln support for openAFS (from Ludvig Omholt).
258
+ * Added --trace reminder on short exception messages (David Heinemeier
259
+ Hansson suggestion).
260
+ * Added multitask declaration that executes prerequisites in
261
+ parallel. (Doug Young providied an initial implementation).
262
+ * Fixed missing_const hack to be compatible with Rails. (Jamis Buck
263
+ supplied test case).
264
+ * Made the RDoc task default to internal (in-process) RDoc formatting.
265
+ The old behavior is still available by setting the +external+ flag
266
+ to true.
267
+ * Rakefiles are now loaded with the expanded path to prevent
268
+ accidental polution from the Ruby load path.
269
+ * The +namespace+ command now returns a NameSpace object that can be
270
+ used to lookup tasks defined in that namespace. This allows for
271
+ better anonymous namespace behavior.
272
+ * Task objects my now be used in prerequisite lists directly.
273
+
274
+ == Version 0.6.1
275
+
276
+ * Rebuilt 0.6.0 gem without signing.
277
+
278
+ == Version 0.6.0
279
+
280
+ * Fixed file creation bug in the unit tests (caused infinite loop on
281
+ windows).
282
+ * Fixed bug where session based functional tests were run under
283
+ windows.
284
+ * Fixed bug in directory tasks so that updating a directory will not
285
+ retrigger file tasks depending on the directory (see
286
+ FileCreationTask and EarlyTime).
287
+ * Added egrep to FileList
288
+ * ruby command now runs same ruby version as rake.
289
+ * Added investigation to task object. (suggested by Martin Fowler)
290
+ * Added ruby_opts to the test task to allow arbitrary ruby options to
291
+ be passed to the test script. (Greg Fast)
292
+ * Fixed the test loader to ignore options. (Greg Fast)
293
+ * Moved Task, FileTask, FileCreationTask and RakeApp into the Rake
294
+ module namespace. Old style namespace behavior can be invoked via
295
+ the --classic-namespace option. (requested by Kelly Felkins).
296
+ * GemTask is now sensitive to the gem platform (Masao Mutoh).
297
+ * A non-existing file prerequisite will no longer cause an exception
298
+ (Philipp Neubeck).
299
+ * Multiple prerequisites on Rake rules now allowed (initial patch
300
+ supplied by Stuart Jansen).
301
+
302
+ == Version 0.5.4
303
+
304
+ * Added double quotes to the test runner.
305
+ * Added .svn to default ignore list.
306
+ * Updated FileList#include to support nested arrays and filelists.
307
+
308
+ == Version 0.5.3
309
+
310
+ * Added support for importing Rakefile and other dependencies.
311
+ * Fixed bug so that now rules can chain off of existing tasks as well
312
+ as existing files.
313
+ * Fixed verbose flag bug in the testing task. Shortened some failure
314
+ messages.
315
+ * Make FileUtils methods private at the top level module to avoid
316
+ accidental method leaking into other objects.
317
+ * Added test loader option to test task. "testrb" is no longer the
318
+ default test loader. It is now eating syntax errors that should
319
+ halt the unit tests.
320
+ * Revamped FileList so that it works more like and array (addressed
321
+ flatten bug). Added many tests around file list.
322
+ * Added +ext+ method to both String and FileList.
323
+
324
+ == Version 0.5.0
325
+
326
+ * Fixed documentation that was lacking the Rake module name (Tilman
327
+ Sauerbeck).
328
+ * Added tar.gz and tar.bz2 support to package task (Tilman Sauerbeck).
329
+ * Recursive rules are now supported (Tilman Sauerbeck).
330
+ * Added warning option for the Test Task (requested by Eric Hodel).
331
+ * The jamis rdoc template is only used if it exists.
332
+ * Added fix for Ruby 1.8.2 test/unit and rails problem.
333
+ * Added contributed rake man file (Jani Monoses).
334
+ * Added Brian Candler's fix for problems in --trace and --dry-run
335
+ mode.
336
+
337
+ == Version 0.4.15
338
+
339
+ * Fixed a bug that prevented the TESTOPTS flag from working with the
340
+ revised for 1.8.2 test task.
341
+ * Updated the docs on --trace to indicate that it also enables a full
342
+ backtrace on errors.
343
+
344
+ == Version 0.4.14
345
+
346
+ * Modified the TestTask to workaround the Ruby 1.8.2 change in
347
+ autoexecuting unit tests.
348
+
349
+ == Version 0.4.13
350
+
351
+ * Fixed the dry-run flag so it is operating again.
352
+ * Multiple arguments to sh and ruby commands will not be interpreted
353
+ by the shell (patch provided by Jonathan Paisley).
354
+
355
+ == Version 0.4.12
356
+
357
+ * Added --silent (-s) to suppress the (in directory) rake message.
358
+
359
+ == Version 0.4.11
360
+
361
+ * Changed the "don't know how to rake" message (finally)
362
+ * Changes references to a literal "Rakefile" to reference the global
363
+ variable $rakefile (which contains the actual name of the rakefile).
364
+
365
+ == Version 0.4.10
366
+
367
+ * Added block support to the "sh" command, allowing users to take
368
+ special actions on the result of the system call. E.g.
369
+
370
+ sh "shell_command" do |ok, res|
371
+ puts "Program returned #{res.exitstatus}" if ! ok
372
+ end
373
+
374
+ == Version 0.4.9
375
+
376
+ * Switched to Jamis Buck's RDoc template.
377
+ * Removed autorequire from Rake's gem spec. This prevents the Rake
378
+ libraries from loading while using rails.
379
+
380
+ == Version 0.4.8
381
+
382
+ * Added support for .rb versions of Rakefile.
383
+ * Removed \\\n's from test task.
384
+ * Fixed Ruby 1.9 compatibility issue with FileList.
385
+
386
+ == Version 0.4.7
387
+
388
+ * Fixed problem in FileList that caused Ruby 1.9 to go into infinite
389
+ recursion. Since to_a was removed from Object, it does not need to
390
+ added back into the list of methods to rewrite in FileList. (Thanks
391
+ to Kent Sibilev for pointing this out).
392
+
393
+ == Version 0.4.6
394
+ * Removed test version of ln in FileUtils that prevented safe_ln from
395
+ using ln.
396
+
397
+ == Version 0.4.5
398
+ * Upgraded comments in TestTask.
399
+ * FileList to_s and inspect now automatically resolve pending changes.
400
+ * FileList#exclude properly returns the FileList.
401
+
402
+ == Version 0.4.4
403
+ * Fixed initialization problem with @comment.
404
+ * Now using multi -r technique in TestTask. Switch Rakefile back to
405
+ using the built-in test task macros because the rake runtime is no
406
+ longer needed.
407
+ * Added 'TEST=filename' and 'TESTOPTS=options' to the Test Task
408
+ macros.
409
+ * Allow a +test_files+ attribute in test tasks. This allows more
410
+ flexibility in specifying test files.
411
+
412
+ == Version 0.4.3
413
+ * Fixed Comment leakage.
414
+
415
+ == Version 0.4.2
416
+ * Added safe_ln that falls back to a copy if a file link is not supported.
417
+ * Package builder now uses safe_ln.
418
+
419
+ == Version 0.4.1
420
+ * Task comments are now additive, combined with "/".
421
+ * Works with (soon to be released) rubygems 0.6.2 (or 0.7.0)
422
+
423
+ == Version 0.4.0
424
+ * FileList now uses deferred loading. The file system is not searched
425
+ until the first call that needs the file names.
426
+ * VAR=VALUE options are now accepted on the command line and are
427
+ treated like environment variables. The values may be tested in a
428
+ Rakefile by referencing ENV['VAR'].
429
+ * File.mtime is now used (instead of File.new().mtime).
430
+
431
+ == Version 0.3.2.x
432
+
433
+ * Removed some hidden dependencies on rubygems. Tests now will test
434
+ gems only if they are installed.
435
+ * Removed Sys from some example files. I believe that is that last
436
+ reference to Sys outside of the contrib area.
437
+ * Updated all copyright notices to include 2004.
438
+
439
+ == Version 0.3.2
440
+
441
+ * GEM Installation now works with the application stub.
442
+
443
+ == Version 0.3.1
444
+
445
+ * FileLists now automatically ignore CVS, .bak, !
446
+ * GEM Installation now works.
447
+
448
+ == Version 0.3.0
449
+
450
+ Promoted 0.2.10.
451
+
452
+ == Version 0.2.10
453
+ General
454
+
455
+ * Added title to Rake's rdocs
456
+ * Contrib packages are no longer included in the documentation.
457
+
458
+ RDoc Issues
459
+
460
+ * Removed default for the '--main' option
461
+ * Fixed rendering of the rdoc options
462
+ * Fixed clean/clobber confusion with rerdoc
463
+ * 'title' attribute added
464
+
465
+ Package Task Library Issues
466
+
467
+ * Version (or explicit :noversion) is required.
468
+ * +package_file+ attribute is now writable
469
+
470
+ FileList Issues
471
+
472
+ * Dropped bang version of exclude. Now using ant-like include/exclude semantics.
473
+ * Enabled the "yield self" idiom in FileList#initialize.
474
+
475
+ == Version 0.2.9
476
+
477
+ This version contains numerous changes as the RubyConf.new(2003)
478
+ presentation was being prepared. The changes include:
479
+
480
+ * The monolithic rubyapp task library is in the process of being
481
+ dropped in favor of lighter weight task libraries.
482
+
483
+ == Version 0.2.7
484
+
485
+ * Added "desc" for task descriptions.
486
+ * -T will now display tasks with descriptions.
487
+ * -P will display tasks and prerequisites.
488
+ * Dropped the Sys module in favor of the 1.8.x FileUtils module. Sys
489
+ is still supported in the contrib area.
490
+
491
+ == Version 0.2.6
492
+
493
+ * Moved to RubyForge
494
+
495
+ == Version 0.2.5
496
+
497
+ * Switched to standard ruby app builder.
498
+ * Added no_match option to file matcher.
499
+
500
+ == Version 0.2.4
501
+
502
+ * Fixed indir, which neglected to actually change directories.
503
+
504
+ == Version 0.2.3
505
+
506
+ * Added rake module for a help target
507
+ * Added 'for_files' to Sys
508
+ * Added a $rakefile constant
509
+ * Added test for selecting proper rule with multiple targets.