search_biomodel 0.1.2 → 1.0.0

data/search_biomodel/ruby/1.8/specifications/rack-1.3.0.gemspec

@@ -0,0 +1,57 @@
+# -*- encoding: utf-8 -*-
+
+Gem::Specification.new do |s|
+  s.name = %q{rack}
+  s.version = "1.3.0"
+
+  s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
+  s.authors = ["Christian Neukirchen"]
+  s.date = %q{2011-05-22}
+  s.default_executable = %q{rackup}
+  s.description = %q{Rack provides minimal, modular and adaptable interface for developing
+web applications in Ruby.  By wrapping HTTP requests and responses in
+the simplest way possible, it unifies and distills the API for web
+servers, web frameworks, and software in between (the so-called
+middleware) into a single method call.
+
+Also see http://rack.rubyforge.org.
+}
+  s.email = %q{chneukirchen@gmail.com}
+  s.executables = ["rackup"]
+  s.extra_rdoc_files = ["README", "KNOWN-ISSUES"]
+  s.files = ["bin/rackup", "contrib/rack_logo.svg", "example/lobster.ru", "example/protectedlobster.rb", "example/protectedlobster.ru", "lib/rack/auth/abstract/handler.rb", "lib/rack/auth/abstract/request.rb", "lib/rack/auth/basic.rb", "lib/rack/auth/digest/md5.rb", "lib/rack/auth/digest/nonce.rb", "lib/rack/auth/digest/params.rb", "lib/rack/auth/digest/request.rb", "lib/rack/backports/uri/common.rb", "lib/rack/builder.rb", "lib/rack/cascade.rb", "lib/rack/chunked.rb", "lib/rack/commonlogger.rb", "lib/rack/conditionalget.rb", "lib/rack/config.rb", "lib/rack/content_length.rb", "lib/rack/content_type.rb", "lib/rack/deflater.rb", "lib/rack/directory.rb", "lib/rack/etag.rb", "lib/rack/file.rb", "lib/rack/handler/cgi.rb", "lib/rack/handler/evented_mongrel.rb", "lib/rack/handler/fastcgi.rb", "lib/rack/handler/lsws.rb", "lib/rack/handler/mongrel.rb", "lib/rack/handler/scgi.rb", "lib/rack/handler/swiftiplied_mongrel.rb", "lib/rack/handler/thin.rb", "lib/rack/handler/webrick.rb", "lib/rack/handler.rb", "lib/rack/head.rb", "lib/rack/lint.rb", "lib/rack/lobster.rb", "lib/rack/lock.rb", "lib/rack/logger.rb", "lib/rack/methodoverride.rb", "lib/rack/mime.rb", "lib/rack/mock.rb", "lib/rack/multipart/generator.rb", "lib/rack/multipart/parser.rb", "lib/rack/multipart/uploaded_file.rb", "lib/rack/multipart.rb", "lib/rack/nulllogger.rb", "lib/rack/recursive.rb", "lib/rack/reloader.rb", "lib/rack/request.rb", "lib/rack/response.rb", "lib/rack/rewindable_input.rb", "lib/rack/runtime.rb", "lib/rack/sendfile.rb", "lib/rack/server.rb", "lib/rack/session/abstract/id.rb", "lib/rack/session/cookie.rb", "lib/rack/session/memcache.rb", "lib/rack/session/pool.rb", "lib/rack/showexceptions.rb", "lib/rack/showstatus.rb", "lib/rack/static.rb", "lib/rack/urlmap.rb", "lib/rack/utils.rb", "lib/rack.rb", "test/builder/anything.rb", "test/builder/comment.ru", "test/builder/end.ru", "test/builder/options.ru", "test/cgi/lighttpd.conf", "test/cgi/rackup_stub.rb", "test/cgi/sample_rackup.ru", "test/cgi/test", "test/cgi/test.fcgi", "test/cgi/test.ru", "test/gemloader.rb", "test/multipart/bad_robots", "test/multipart/binary", "test/multipart/content_type_and_no_filename", "test/multipart/empty", "test/multipart/fail_16384_nofile", "test/multipart/file1.txt", "test/multipart/filename_and_modification_param", "test/multipart/filename_with_escaped_quotes", "test/multipart/filename_with_escaped_quotes_and_modification_param", "test/multipart/filename_with_percent_escaped_quotes", "test/multipart/filename_with_unescaped_quotes", "test/multipart/ie", "test/multipart/mixed_files", "test/multipart/nested", "test/multipart/none", "test/multipart/semicolon", "test/multipart/text", "test/multipart/webkit", "test/rackup/config.ru", "test/registering_handler/rack/handler/registering_myself.rb", "test/spec_auth_basic.rb", "test/spec_auth_digest.rb", "test/spec_builder.rb", "test/spec_cascade.rb", "test/spec_cgi.rb", "test/spec_chunked.rb", "test/spec_commonlogger.rb", "test/spec_conditionalget.rb", "test/spec_config.rb", "test/spec_content_length.rb", "test/spec_content_type.rb", "test/spec_deflater.rb", "test/spec_directory.rb", "test/spec_etag.rb", "test/spec_fastcgi.rb", "test/spec_file.rb", "test/spec_handler.rb", "test/spec_head.rb", "test/spec_lint.rb", "test/spec_lobster.rb", "test/spec_lock.rb", "test/spec_logger.rb", "test/spec_methodoverride.rb", "test/spec_mock.rb", "test/spec_mongrel.rb", "test/spec_multipart.rb", "test/spec_nulllogger.rb", "test/spec_recursive.rb", "test/spec_request.rb", "test/spec_response.rb", "test/spec_rewindable_input.rb", "test/spec_runtime.rb", "test/spec_sendfile.rb", "test/spec_server.rb", "test/spec_session_abstract_id.rb", "test/spec_session_cookie.rb", "test/spec_session_memcache.rb", "test/spec_session_pool.rb", "test/spec_showexceptions.rb", "test/spec_showstatus.rb", "test/spec_static.rb", "test/spec_thin.rb", "test/spec_urlmap.rb", "test/spec_utils.rb", "test/spec_webrick.rb", "test/testrequest.rb", "test/unregistered_handler/rack/handler/unregistered.rb", "test/unregistered_handler/rack/handler/unregistered_long_one.rb", "COPYING", "KNOWN-ISSUES", "rack.gemspec", "Rakefile", "README", "SPEC"]
+  s.homepage = %q{http://rack.rubyforge.org}
+  s.require_paths = ["lib"]
+  s.rubyforge_project = %q{rack}
+  s.rubygems_version = %q{1.3.7}
+  s.summary = %q{a modular Ruby webserver interface}
+  s.test_files = ["test/spec_auth_basic.rb", "test/spec_auth_digest.rb", "test/spec_builder.rb", "test/spec_cascade.rb", "test/spec_cgi.rb", "test/spec_chunked.rb", "test/spec_commonlogger.rb", "test/spec_conditionalget.rb", "test/spec_config.rb", "test/spec_content_length.rb", "test/spec_content_type.rb", "test/spec_deflater.rb", "test/spec_directory.rb", "test/spec_etag.rb", "test/spec_fastcgi.rb", "test/spec_file.rb", "test/spec_handler.rb", "test/spec_head.rb", "test/spec_lint.rb", "test/spec_lobster.rb", "test/spec_lock.rb", "test/spec_logger.rb", "test/spec_methodoverride.rb", "test/spec_mock.rb", "test/spec_mongrel.rb", "test/spec_multipart.rb", "test/spec_nulllogger.rb", "test/spec_recursive.rb", "test/spec_request.rb", "test/spec_response.rb", "test/spec_rewindable_input.rb", "test/spec_runtime.rb", "test/spec_sendfile.rb", "test/spec_server.rb", "test/spec_session_abstract_id.rb", "test/spec_session_cookie.rb", "test/spec_session_memcache.rb", "test/spec_session_pool.rb", "test/spec_showexceptions.rb", "test/spec_showstatus.rb", "test/spec_static.rb", "test/spec_thin.rb", "test/spec_urlmap.rb", "test/spec_utils.rb", "test/spec_webrick.rb"]
+
+  if s.respond_to? :specification_version then
+    current_version = Gem::Specification::CURRENT_SPECIFICATION_VERSION
+    s.specification_version = 3
+
+    if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
+      s.add_development_dependency(%q<bacon>, [">= 0"])
+      s.add_development_dependency(%q<rake>, [">= 0"])
+      s.add_development_dependency(%q<fcgi>, [">= 0"])
+      s.add_development_dependency(%q<memcache-client>, [">= 0"])
+      s.add_development_dependency(%q<mongrel>, [">= 0"])
+      s.add_development_dependency(%q<thin>, [">= 0"])
+    else
+      s.add_dependency(%q<bacon>, [">= 0"])
+      s.add_dependency(%q<rake>, [">= 0"])
+      s.add_dependency(%q<fcgi>, [">= 0"])
+      s.add_dependency(%q<memcache-client>, [">= 0"])
+      s.add_dependency(%q<mongrel>, [">= 0"])
+      s.add_dependency(%q<thin>, [">= 0"])
+    end
+  else
+    s.add_dependency(%q<bacon>, [">= 0"])
+    s.add_dependency(%q<rake>, [">= 0"])
+    s.add_dependency(%q<fcgi>, [">= 0"])
+    s.add_dependency(%q<memcache-client>, [">= 0"])
+    s.add_dependency(%q<mongrel>, [">= 0"])
+    s.add_dependency(%q<thin>, [">= 0"])
+  end
+end

data/search_biomodel/ruby/1.8/specifications/rake-0.9.2.gemspec

@@ -0,0 +1,43 @@
+# -*- encoding: utf-8 -*-
+
+Gem::Specification.new do |s|
+  s.name = %q{rake}
+  s.version = "0.9.2"
+
+  s.required_rubygems_version = Gem::Requirement.new(">= 1.3.2") if s.respond_to? :required_rubygems_version=
+  s.authors = ["Jim Weirich"]
+  s.date = %q{2011-06-05}
+  s.default_executable = %q{rake}
+  s.description = %q{      Rake is a Make-like program implemented in Ruby. Tasks
+      and dependencies are specified in standard Ruby syntax.
+}
+  s.email = %q{jim@weirichhouse.org}
+  s.executables = ["rake"]
+  s.extra_rdoc_files = ["README.rdoc", "MIT-LICENSE", "TODO", "CHANGES", "doc/command_line_usage.rdoc", "doc/glossary.rdoc", "doc/proto_rake.rdoc", "doc/rakefile.rdoc", "doc/rational.rdoc", "doc/release_notes/rake-0.4.14.rdoc", "doc/release_notes/rake-0.4.15.rdoc", "doc/release_notes/rake-0.5.0.rdoc", "doc/release_notes/rake-0.5.3.rdoc", "doc/release_notes/rake-0.5.4.rdoc", "doc/release_notes/rake-0.6.0.rdoc", "doc/release_notes/rake-0.7.0.rdoc", "doc/release_notes/rake-0.7.1.rdoc", "doc/release_notes/rake-0.7.2.rdoc", "doc/release_notes/rake-0.7.3.rdoc", "doc/release_notes/rake-0.8.0.rdoc", "doc/release_notes/rake-0.8.2.rdoc", "doc/release_notes/rake-0.8.3.rdoc", "doc/release_notes/rake-0.8.4.rdoc", "doc/release_notes/rake-0.8.5.rdoc", "doc/release_notes/rake-0.8.6.rdoc", "doc/release_notes/rake-0.8.7.rdoc", "doc/release_notes/rake-0.9.0.rdoc", "doc/release_notes/rake-0.9.1.rdoc", "doc/release_notes/rake-0.9.2.rdoc"]
+  s.files = [".gemtest", "install.rb", "CHANGES", "MIT-LICENSE", "Rakefile", "README.rdoc", "RRR", "TODO", "bin/rake", "lib/rake/alt_system.rb", "lib/rake/application.rb", "lib/rake/classic_namespace.rb", "lib/rake/clean.rb", "lib/rake/cloneable.rb", "lib/rake/contrib/compositepublisher.rb", "lib/rake/contrib/ftptools.rb", "lib/rake/contrib/publisher.rb", "lib/rake/contrib/rubyforgepublisher.rb", "lib/rake/contrib/sshpublisher.rb", "lib/rake/contrib/sys.rb", "lib/rake/default_loader.rb", "lib/rake/dsl_definition.rb", "lib/rake/early_time.rb", "lib/rake/ext/core.rb", "lib/rake/ext/module.rb", "lib/rake/ext/string.rb", "lib/rake/ext/time.rb", "lib/rake/file_creation_task.rb", "lib/rake/file_list.rb", "lib/rake/file_task.rb", "lib/rake/file_utils.rb", "lib/rake/file_utils_ext.rb", "lib/rake/gempackagetask.rb", "lib/rake/invocation_chain.rb", "lib/rake/invocation_exception_mixin.rb", "lib/rake/loaders/makefile.rb", "lib/rake/multi_task.rb", "lib/rake/name_space.rb", "lib/rake/packagetask.rb", "lib/rake/pathmap.rb", "lib/rake/pseudo_status.rb", "lib/rake/rake_module.rb", "lib/rake/rake_test_loader.rb", "lib/rake/rdoctask.rb", "lib/rake/ruby182_test_unit_fix.rb", "lib/rake/rule_recursion_overflow_error.rb", "lib/rake/runtest.rb", "lib/rake/task.rb", "lib/rake/task_argument_error.rb", "lib/rake/task_arguments.rb", "lib/rake/task_manager.rb", "lib/rake/tasklib.rb", "lib/rake/testtask.rb", "lib/rake/version.rb", "lib/rake/win32.rb", "lib/rake.rb", "test/check_expansion.rb", "test/check_no_expansion.rb", "test/data/rakelib/test1.rb", "test/data/rbext/rakefile.rb", "test/file_creation.rb", "test/helper.rb", "test/in_environment.rb", "test/reqfile.rb", "test/reqfile2.rb", "test/shellcommand.rb", "test/test_rake.rb", "test/test_rake_application.rb", "test/test_rake_application_options.rb", "test/test_rake_clean.rb", "test/test_rake_definitions.rb", "test/test_rake_directory_task.rb", "test/test_rake_dsl.rb", "test/test_rake_early_time.rb", "test/test_rake_extension.rb", "test/test_rake_file_creation_task.rb", "test/test_rake_file_list.rb", "test/test_rake_file_list_path_map.rb", "test/test_rake_file_task.rb", "test/test_rake_file_utils.rb", "test/test_rake_ftp_file.rb", "test/test_rake_functional.rb", "test/test_rake_invocation_chain.rb", "test/test_rake_makefile_loader.rb", "test/test_rake_multi_task.rb", "test/test_rake_name_space.rb", "test/test_rake_package_task.rb", "test/test_rake_path_map.rb", "test/test_rake_path_map_explode.rb", "test/test_rake_path_map_partial.rb", "test/test_rake_pseudo_status.rb", "test/test_rake_rdoc_task.rb", "test/test_rake_require.rb", "test/test_rake_rules.rb", "test/test_rake_task.rb", "test/test_rake_task_argument_parsing.rb", "test/test_rake_task_arguments.rb", "test/test_rake_task_lib.rb", "test/test_rake_task_manager.rb", "test/test_rake_task_manager_argument_resolution.rb", "test/test_rake_task_with_arguments.rb", "test/test_rake_test_task.rb", "test/test_rake_top_level_functions.rb", "test/test_rake_win32.rb", "test/test_sys.rb", "test/data/imports/deps.mf", "test/data/sample.mf", "test/data/access/Rakefile", "test/data/chains/Rakefile", "test/data/comments/Rakefile", "test/data/default/Rakefile", "test/data/deprecated_import/Rakefile", "test/data/dryrun/Rakefile", "test/data/extra/Rakefile", "test/data/file_creation_task/Rakefile", "test/data/imports/Rakefile", "test/data/multidesc/Rakefile", "test/data/namespace/Rakefile", "test/data/statusreturn/Rakefile", "test/data/unittest/Rakefile", "test/data/verbose/Rakefile", "doc/command_line_usage.rdoc", "doc/example/a.c", "doc/example/b.c", "doc/example/main.c", "doc/example/Rakefile1", "doc/example/Rakefile2", "doc/glossary.rdoc", "doc/jamis.rb", "doc/proto_rake.rdoc", "doc/rake.1.gz", "doc/rakefile.rdoc", "doc/rational.rdoc", "doc/release_notes/rake-0.4.14.rdoc", "doc/release_notes/rake-0.4.15.rdoc", "doc/release_notes/rake-0.5.0.rdoc", "doc/release_notes/rake-0.5.3.rdoc", "doc/release_notes/rake-0.5.4.rdoc", "doc/release_notes/rake-0.6.0.rdoc", "doc/release_notes/rake-0.7.0.rdoc", "doc/release_notes/rake-0.7.1.rdoc", "doc/release_notes/rake-0.7.2.rdoc", "doc/release_notes/rake-0.7.3.rdoc", "doc/release_notes/rake-0.8.0.rdoc", "doc/release_notes/rake-0.8.2.rdoc", "doc/release_notes/rake-0.8.3.rdoc", "doc/release_notes/rake-0.8.4.rdoc", "doc/release_notes/rake-0.8.5.rdoc", "doc/release_notes/rake-0.8.6.rdoc", "doc/release_notes/rake-0.8.7.rdoc", "doc/release_notes/rake-0.9.0.rdoc", "doc/release_notes/rake-0.9.1.rdoc", "doc/release_notes/rake-0.9.2.rdoc"]
+  s.homepage = %q{http://rake.rubyforge.org}
+  s.rdoc_options = ["--line-numbers", "--show-hash", "--main", "README.rdoc", "--title", "Rake -- Ruby Make"]
+  s.require_paths = ["lib"]
+  s.rubyforge_project = %q{rake}
+  s.rubygems_version = %q{1.3.7}
+  s.summary = %q{Ruby based make-like utility.}
+
+  if s.respond_to? :specification_version then
+    current_version = Gem::Specification::CURRENT_SPECIFICATION_VERSION
+    s.specification_version = 3
+
+    if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
+      s.add_development_dependency(%q<minitest>, ["~> 2.1"])
+      s.add_development_dependency(%q<session>, ["~> 2.4"])
+      s.add_development_dependency(%q<flexmock>, ["~> 0.8.11"])
+    else
+      s.add_dependency(%q<minitest>, ["~> 2.1"])
+      s.add_dependency(%q<session>, ["~> 2.4"])
+      s.add_dependency(%q<flexmock>, ["~> 0.8.11"])
+    end
+  else
+    s.add_dependency(%q<minitest>, ["~> 2.1"])
+    s.add_dependency(%q<session>, ["~> 2.4"])
+    s.add_dependency(%q<flexmock>, ["~> 0.8.11"])
+  end
+end

data/search_biomodel/ruby/1.8/specifications/rcov-0.9.9.gemspec

@@ -0,0 +1,34 @@
+# -*- encoding: utf-8 -*-
+
+Gem::Specification.new do |s|
+  s.name = %q{rcov}
+  s.version = "0.9.9"
+
+  s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
+  s.authors = ["Relevance", "Chad Humphries (spicycode)", "Aaron Bedra (abedra)", "Jay McGaffigan(hooligan495)", "Mauricio Fernandez"]
+  s.cert_chain = nil
+  s.date = %q{2009-12-29}
+  s.default_executable = %q{rcov}
+  s.description = %q{rcov is a code coverage tool for Ruby. It is commonly used for viewing overall test unit coverage of target code.  It features fast execution (20-300 times faster than previous tools), multiple analysis modes, XHTML and several kinds of text reports, easy automation with Rake via a RcovTask, fairly accurate coverage information through code linkage inference using simple heuristics, colorblind-friendliness...}
+  s.email = %q{opensource@thinkrelevance.com}
+  s.executables = ["rcov"]
+  s.extensions = ["ext/rcovrt/extconf.rb"]
+  s.files = ["bin/rcov", "lib/rcov.rb", "lib/rcov/lowlevel.rb", "lib/rcov/version.rb", "lib/rcov/rcovtask.rb", "lib/rcov/formatters.rb", "lib/rcov/call_site_analyzer.rb", "lib/rcov/code_coverage_analyzer.rb", "lib/rcov/coverage_info.rb", "lib/rcov/differential_analyzer.rb", "lib/rcov/file_statistics.rb", "lib/rcov/formatters/base_formatter.rb", "lib/rcov/formatters/full_text_report.rb", "lib/rcov/formatters/html_erb_template.rb", "lib/rcov/formatters/html_coverage.rb", "lib/rcov/formatters/text_coverage_diff.rb", "lib/rcov/formatters/text_report.rb", "lib/rcov/formatters/text_summary.rb", "lib/rcov/formatters/failure_report.rb", "lib/rcov/templates/index.html.erb", "lib/rcov/templates/detail.html.erb", "lib/rcov/templates/screen.css", "lib/rcov/templates/print.css", "lib/rcov/templates/rcov.js", "lib/rcov/templates/jquery-1.3.2.min.js", "lib/rcov/templates/jquery.tablesorter.min.js", "ext/rcovrt/extconf.rb", "ext/rcovrt/1.8/rcovrt.c", "ext/rcovrt/1.9/rcovrt.c", "ext/rcovrt/1.8/callsite.c", "ext/rcovrt/1.9/callsite.c", "LICENSE", "Rakefile", "doc/readme_for_rake.markdown", "doc/readme_for_vim.markdown", "doc/readme_for_emacs.markdown", "doc/readme_for_api.markdown", "THANKS", "test/functional_test.rb", "test/file_statistics_test.rb", "test/assets/sample_03.rb", "test/assets/sample_05-new.rb", "test/code_coverage_analyzer_test.rb", "test/assets/sample_04.rb", "test/assets/sample_02.rb", "test/assets/sample_05-old.rb", "test/assets/sample_01.rb", "test/turn_off_rcovrt.rb", "test/call_site_analyzer_test.rb", "test/assets/sample_05.rb", "test/assets/sample_06.rb", "editor-extensions/rcov.vim", "test/test_helper.rb", "test/expected_coverage/diff-gcc-all.out", "test/expected_coverage/diff-gcc-diff.out", "test/expected_coverage/diff-gcc-original.out", "test/expected_coverage/diff-no-color.out", "test/expected_coverage/diff.out", "test/expected_coverage/gcc-text.out", "test/expected_coverage/sample_03_rb.html", "test/expected_coverage/sample_03_rb.rb", "test/expected_coverage/sample_04_rb.html", "editor-extensions/rcov.el", "setup.rb", "BLURB"]
+  s.homepage = %q{http://github.com/relevance/rcov}
+  s.rdoc_options = ["--title", "rcov code coverage tool"]
+  s.require_paths = ["lib"]
+  s.required_ruby_version = Gem::Requirement.new("> 0.0.0")
+  s.rubygems_version = %q{1.3.7}
+  s.summary = %q{Code coverage analysis tool for Ruby}
+  s.test_files = ["test/functional_test.rb", "test/file_statistics_test.rb", "test/code_coverage_analyzer_test.rb", "test/call_site_analyzer_test.rb"]
+
+  if s.respond_to? :specification_version then
+    current_version = Gem::Specification::CURRENT_SPECIFICATION_VERSION
+    s.specification_version = 1
+
+    if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
+    else
+    end
+  else
+  end
+end

data/search_biomodel/ruby/1.8/specifications/savon-0.9.2.gemspec

@@ -0,0 +1,55 @@
+# -*- encoding: utf-8 -*-
+
+Gem::Specification.new do |s|
+  s.name = %q{savon}
+  s.version = "0.9.2"
+
+  s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
+  s.authors = ["Daniel Harrington"]
+  s.date = %q{2011-04-29}
+  s.description = %q{Savon is the heavy metal Ruby SOAP client}
+  s.email = %q{me@rubiii.com}
+  s.files = [".gitignore", ".rspec", ".travis.yml", ".yardopts", "CHANGELOG.md", "Gemfile", "LICENSE", "README.md", "Rakefile", "lib/savon.rb", "lib/savon/client.rb", "lib/savon/core_ext/hash.rb", "lib/savon/core_ext/object.rb", "lib/savon/core_ext/string.rb", "lib/savon/core_ext/time.rb", "lib/savon/error.rb", "lib/savon/global.rb", "lib/savon/http/error.rb", "lib/savon/soap.rb", "lib/savon/soap/fault.rb", "lib/savon/soap/request.rb", "lib/savon/soap/response.rb", "lib/savon/soap/xml.rb", "lib/savon/version.rb", "lib/savon/wsdl/document.rb", "lib/savon/wsdl/parser.rb", "lib/savon/wsdl/request.rb", "lib/savon/wsse.rb", "savon.gemspec", "spec/fixtures/gzip/message.gz", "spec/fixtures/response/another_soap_fault.xml", "spec/fixtures/response/authentication.xml", "spec/fixtures/response/header.xml", "spec/fixtures/response/list.xml", "spec/fixtures/response/multi_ref.xml", "spec/fixtures/response/soap_fault.xml", "spec/fixtures/response/soap_fault12.xml", "spec/fixtures/wsdl/authentication.xml", "spec/fixtures/wsdl/geotrust.xml", "spec/fixtures/wsdl/namespaced_actions.xml", "spec/fixtures/wsdl/no_namespace.xml", "spec/fixtures/wsdl/soap12.xml", "spec/fixtures/wsdl/two_bindings.xml", "spec/savon/client_spec.rb", "spec/savon/core_ext/hash_spec.rb", "spec/savon/core_ext/object_spec.rb", "spec/savon/core_ext/string_spec.rb", "spec/savon/core_ext/time_spec.rb", "spec/savon/http/error_spec.rb", "spec/savon/savon_spec.rb", "spec/savon/soap/fault_spec.rb", "spec/savon/soap/request_spec.rb", "spec/savon/soap/response_spec.rb", "spec/savon/soap/xml_spec.rb", "spec/savon/soap_spec.rb", "spec/savon/wsdl/document_spec.rb", "spec/savon/wsdl/parser_spec.rb", "spec/savon/wsdl/request_spec.rb", "spec/savon/wsse_spec.rb", "spec/spec_helper.rb", "spec/support/endpoint.rb", "spec/support/fixture.rb"]
+  s.homepage = %q{http://savonrb.com}
+  s.require_paths = ["lib"]
+  s.rubyforge_project = %q{savon}
+  s.rubygems_version = %q{1.3.7}
+  s.summary = %q{Heavy metal Ruby SOAP client}
+
+  if s.respond_to? :specification_version then
+    current_version = Gem::Specification::CURRENT_SPECIFICATION_VERSION
+    s.specification_version = 3
+
+    if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
+      s.add_runtime_dependency(%q<builder>, [">= 2.1.2"])
+      s.add_runtime_dependency(%q<nori>, [">= 0.2.0"])
+      s.add_runtime_dependency(%q<httpi>, [">= 0.7.8"])
+      s.add_runtime_dependency(%q<gyoku>, [">= 0.4.0"])
+      s.add_runtime_dependency(%q<nokogiri>, [">= 1.4.0"])
+      s.add_development_dependency(%q<rspec>, ["~> 2.4.0"])
+      s.add_development_dependency(%q<autotest>, [">= 0"])
+      s.add_development_dependency(%q<mocha>, ["~> 0.9.8"])
+      s.add_development_dependency(%q<timecop>, ["~> 0.3.5"])
+    else
+      s.add_dependency(%q<builder>, [">= 2.1.2"])
+      s.add_dependency(%q<nori>, [">= 0.2.0"])
+      s.add_dependency(%q<httpi>, [">= 0.7.8"])
+      s.add_dependency(%q<gyoku>, [">= 0.4.0"])
+      s.add_dependency(%q<nokogiri>, [">= 1.4.0"])
+      s.add_dependency(%q<rspec>, ["~> 2.4.0"])
+      s.add_dependency(%q<autotest>, [">= 0"])
+      s.add_dependency(%q<mocha>, ["~> 0.9.8"])
+      s.add_dependency(%q<timecop>, ["~> 0.3.5"])
+    end
+  else
+    s.add_dependency(%q<builder>, [">= 2.1.2"])
+    s.add_dependency(%q<nori>, [">= 0.2.0"])
+    s.add_dependency(%q<httpi>, [">= 0.7.8"])
+    s.add_dependency(%q<gyoku>, [">= 0.4.0"])
+    s.add_dependency(%q<nokogiri>, [">= 1.4.0"])
+    s.add_dependency(%q<rspec>, ["~> 2.4.0"])
+    s.add_dependency(%q<autotest>, [">= 0"])
+    s.add_dependency(%q<mocha>, ["~> 0.9.8"])
+    s.add_dependency(%q<timecop>, ["~> 0.3.5"])
+  end
+end

data/test/test_search_biomodel.rb

@@ -5,8 +5,33 @@ require 'search_biomodel'
 class TestSearchBiomodel < Test::Unit::TestCase
   include SysMODB::SearchBiomodel
 
-  def test_find_all_models
-    response =  get_all_models
-    assert_not_nil response
-  end
+
+#returned result is a hash. use response[:key] or response[:value]
+   def test_find_all_models
+      response = []
+      i=0
+      response = get_all_models
+      response.each {|x| puts "\n\n Response #{i+=1}:   #{x[:value].to_s} "}
+      response.each {|x| assert_not_nil x[:value] }
+   end
+
+
+# need to find example of chebiid
+   def test_search_by_ChEBIID
+      response = []
+      i = 0 
+      response = search_by_ChEBIID("CHEBI:15422")
+      response.each {|x| puts "\n\n Response #{i+=1}:   #{x} "}
+      response.each {|x| assert_not_nil x }
+   end
+
+
+#need to handle multiple results
+   def test_search_by_name
+      response = []
+      i = 0 
+      response = search_by_name("Kolomeisky2003")    #_MyosinV_Processivity")
+      response.each {|x| puts "\n\n Response #{i+=1}:   #{x} "}
+      response.each {|x| assert_not_nil x }
+   end
 end

metadata

@@ -1,13 +1,13 @@
 --- !ruby/object:Gem::Specification 
 name: search_biomodel
 version: !ruby/object:Gem::Version 
-  hash: 31
+  hash: 23
   prerelease: false
   segments: 
-  - 0
   - 1
-  - 2
-  version: 0.1.2
+  - 0
+  - 0
+  version: 1.0.0
 platform: ruby
 authors: 
 - Niall Beard
@@ -15,69 +15,55 @@ autorequire:
 bindir: bin
 cert_chain: []
 
-date: 2011-06-27 00:00:00 +01:00
+date: 2011-06-28 00:00:00 +01:00
 default_executable: 
 dependencies: 
 - !ruby/object:Gem::Dependency 
   prerelease: false
-  name: shoulda
+  name: jeweler
   version_requirements: &id001 !ruby/object:Gem::Requirement 
     none: false
     requirements: 
-    - - ">="
+    - - ~>
       - !ruby/object:Gem::Version 
-        hash: 3
+        hash: 11
         segments: 
-        - 0
-        version: "0"
+        - 1
+        - 6
+        - 2
+        version: 1.6.2
   requirement: *id001
   type: :development
 - !ruby/object:Gem::Dependency 
   prerelease: false
-  name: bundler
+  name: rcov
   version_requirements: &id002 !ruby/object:Gem::Requirement 
     none: false
     requirements: 
-    - - ~>
+    - - ">="
       - !ruby/object:Gem::Version 
-        hash: 23
+        hash: 3
         segments: 
-        - 1
-        - 0
         - 0
-        version: 1.0.0
+        version: "0"
   requirement: *id002
   type: :development
 - !ruby/object:Gem::Dependency 
   prerelease: false
-  name: jeweler
+  name: savon
   version_requirements: &id003 !ruby/object:Gem::Requirement 
     none: false
     requirements: 
     - - ~>
       - !ruby/object:Gem::Version 
-        hash: 11
+        hash: 63
         segments: 
-        - 1
-        - 6
+        - 0
+        - 9
         - 2
-        version: 1.6.2
+        version: 0.9.2
   requirement: *id003
   type: :development
-- !ruby/object:Gem::Dependency 
-  prerelease: false
-  name: rcov
-  version_requirements: &id004 !ruby/object:Gem::Requirement 
-    none: false
-    requirements: 
-    - - ">="
-      - !ruby/object:Gem::Version 
-        hash: 3
-        segments: 
-        - 0
-        version: "0"
-  requirement: *id004
-  type: :development
 description: "Client package for creating, sending, recieving and consuming SOAP messages from BioModels search engine "
 email: beardn9@cs.man.ac.uk
 executables: []
@@ -97,7 +83,1056 @@ files:
 - VERSION
 - lib/search_biomodel.rb
 - search_biomodel.gemspec
-- test.rb
+- search_biomodel/ruby/1.8/bin/jeweler
+- search_biomodel/ruby/1.8/bin/nokogiri
+- search_biomodel/ruby/1.8/bin/rackup
+- search_biomodel/ruby/1.8/bin/rake
+- search_biomodel/ruby/1.8/bin/rcov
+- search_biomodel/ruby/1.8/cache/builder-3.0.0.gem
+- search_biomodel/ruby/1.8/cache/git-1.2.5.gem
+- search_biomodel/ruby/1.8/cache/gyoku-0.4.4.gem
+- search_biomodel/ruby/1.8/cache/httpi-0.9.4.gem
+- search_biomodel/ruby/1.8/cache/jeweler-1.6.2.gem
+- search_biomodel/ruby/1.8/cache/nokogiri-1.4.6.gem
+- search_biomodel/ruby/1.8/cache/nori-1.0.1.gem
+- search_biomodel/ruby/1.8/cache/pyu-ntlm-http-0.1.3.1.gem
+- search_biomodel/ruby/1.8/cache/rack-1.3.0.gem
+- search_biomodel/ruby/1.8/cache/rake-0.9.2.gem
+- search_biomodel/ruby/1.8/cache/rcov-0.9.9.gem
+- search_biomodel/ruby/1.8/cache/savon-0.9.2.gem
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/CHANGES
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/README
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/README.rdoc
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/Rakefile
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/TAGS
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/blankslate.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/blankslate.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/xchar.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/xmlbase.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/xmlevents.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/lib/builder/xmlmarkup.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/test/performance.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/test/preload.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_blankslate.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_cssbuilder.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_eventbuilder.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_markupbuilder.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_namecollision.rb
+- search_biomodel/ruby/1.8/gems/builder-3.0.0/test/test_xchar.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/README
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/author.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/base.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/branch.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/branches.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/diff.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/index.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/lib.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/log.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/object.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/path.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/remote.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/repository.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/stash.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/stashes.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/status.rb
+- search_biomodel/ruby/1.8/gems/git-1.2.5/lib/git/working_directory.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/.gemtest
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/.gitignore
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/.rspec
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/.travis.yml
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/CHANGELOG.md
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/Gemfile
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/LICENSE
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/README.md
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/Rakefile
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/gyoku.gemspec
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/array.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/core_ext/string.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/hash.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/version.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/xml_key.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/lib/gyoku/xml_value.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/array_spec.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/core_ext/string_spec.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/hash_spec.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/xml_key_spec.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku/xml_value_spec.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/gyoku_spec.rb
+- search_biomodel/ruby/1.8/gems/gyoku-0.4.4/spec/spec_helper.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/.autotest
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/.gemtest
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/.gitignore
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/.rspec
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/.travis.yml
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/CHANGELOG.md
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/Gemfile
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/LICENSE
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/README.md
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/Rakefile
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/autotest/discover.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/httpi.gemspec
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/adapter.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/adapter/curb.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/adapter/httpclient.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/adapter/net_http.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/auth/config.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/auth/ssl.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/dime.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/request.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/response.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/lib/httpi/version.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/attachment.gif
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/client_cert.pem
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/client_key.pem
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/xml.gz
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/xml.xml
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/xml_dime.dime
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/fixtures/xml_dime.xml
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/adapter/curb_spec.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/adapter/httpclient_spec.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/adapter/net_http_spec.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/adapter_spec.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/auth/config_spec.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/auth/ssl_spec.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/httpi_spec.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/request_spec.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/httpi/response_spec.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/integration/request_spec.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/integration/server.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/spec_helper.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/support/fixture.rb
+- search_biomodel/ruby/1.8/gems/httpi-0.9.4/spec/support/matchers.rb
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/.document
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/ChangeLog.markdown
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/Gemfile
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/Gemfile.lock
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/LICENSE.txt
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/README.markdown
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/Rakefile
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/bin/jeweler
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/cucumber.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/directory_layout.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/dotdocument.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/env_options.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/gemfile.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/git.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/license.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/rakefile.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/readme.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/test.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/generator/test_helper.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/placeholder.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/step_definitions/debug_steps.rb
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/step_definitions/filesystem_steps.rb
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/step_definitions/generator_steps.rb
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/step_definitions/task_steps.rb
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/support/env.rb
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/tasks/build_gem.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/tasks/version.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/features/tasks/version_bumping.feature
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/jeweler.gemspec
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler.rb
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands.rb
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/build_gem.rb
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/check_dependencies.rb
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/install_gem.rb
+- search_biomodel/ruby/1.8/gems/jeweler-1.6.2/lib/jeweler/commands/release_gemspec.rb
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+- search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/soap/xml_spec.rb
+- search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/soap_spec.rb
+- search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/wsdl/document_spec.rb
+- search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/wsdl/parser_spec.rb
+- search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/wsdl/request_spec.rb
+- search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/savon/wsse_spec.rb
+- search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/spec_helper.rb
+- search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/support/endpoint.rb
+- search_biomodel/ruby/1.8/gems/savon-0.9.2/spec/support/fixture.rb
+- search_biomodel/ruby/1.8/specifications/builder-3.0.0.gemspec
+- search_biomodel/ruby/1.8/specifications/git-1.2.5.gemspec
+- search_biomodel/ruby/1.8/specifications/gyoku-0.4.4.gemspec
+- search_biomodel/ruby/1.8/specifications/httpi-0.9.4.gemspec
+- search_biomodel/ruby/1.8/specifications/jeweler-1.6.2.gemspec
+- search_biomodel/ruby/1.8/specifications/nokogiri-1.4.6.gemspec
+- search_biomodel/ruby/1.8/specifications/nori-1.0.1.gemspec
+- search_biomodel/ruby/1.8/specifications/pyu-ntlm-http-0.1.3.1.gemspec
+- search_biomodel/ruby/1.8/specifications/rack-1.3.0.gemspec
+- search_biomodel/ruby/1.8/specifications/rake-0.9.2.gemspec
+- search_biomodel/ruby/1.8/specifications/rcov-0.9.9.gemspec
+- search_biomodel/ruby/1.8/specifications/savon-0.9.2.gemspec
 - test/helper.rb
 - test/test_search_biomodel.rb
 has_rdoc: true