bio-velvet_underground 0.0.1
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- checksums.yaml +7 -0
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- data/ext/src/third-party/zlib-1.2.3/uncompr.c +61 -0
- data/ext/src/third-party/zlib-1.2.3/win32/DLL_FAQ.txt +397 -0
- data/ext/src/third-party/zlib-1.2.3/win32/Makefile.bor +107 -0
- data/ext/src/third-party/zlib-1.2.3/win32/Makefile.emx +69 -0
- data/ext/src/third-party/zlib-1.2.3/win32/Makefile.gcc +141 -0
- data/ext/src/third-party/zlib-1.2.3/win32/Makefile.msc +126 -0
- data/ext/src/third-party/zlib-1.2.3/win32/VisualC.txt +3 -0
- data/ext/src/third-party/zlib-1.2.3/win32/zlib.def +60 -0
- data/ext/src/third-party/zlib-1.2.3/win32/zlib1.rc +39 -0
- data/ext/src/third-party/zlib-1.2.3/zconf.h +332 -0
- data/ext/src/third-party/zlib-1.2.3/zconf.in.h +332 -0
- data/ext/src/third-party/zlib-1.2.3/zlib.3 +159 -0
- data/ext/src/third-party/zlib-1.2.3/zlib.h +1357 -0
- data/ext/src/third-party/zlib-1.2.3/zutil.c +318 -0
- data/ext/src/third-party/zlib-1.2.3/zutil.h +269 -0
- data/lib/bio-velvet_underground.rb +12 -0
- data/lib/bio-velvet_underground/external/VERSION +1 -0
- data/lib/bio-velvet_underground/velvet_underground.rb +72 -0
- data/spec/binary_sequence_store_spec.rb +27 -0
- data/spec/data/1/CnyUnifiedSeq +0 -0
- data/spec/spec_helper.rb +31 -0
- metadata +456 -0
@@ -0,0 +1,331 @@
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/* deflate.h -- internal compression state
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* Copyright (C) 1995-2004 Jean-loup Gailly
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* For conditions of distribution and use, see copyright notice in zlib.h
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*/
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/* WARNING: this file should *not* be used by applications. It is
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part of the implementation of the compression library and is
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subject to change. Applications should only use zlib.h.
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*/
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/* @(#) $Id$ */
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#ifndef DEFLATE_H
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#define DEFLATE_H
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#include "zutil.h"
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/* define NO_GZIP when compiling if you want to disable gzip header and
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trailer creation by deflate(). NO_GZIP would be used to avoid linking in
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the crc code when it is not needed. For shared libraries, gzip encoding
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should be left enabled. */
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#ifndef NO_GZIP
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# define GZIP
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#endif
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/* ===========================================================================
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* Internal compression state.
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*/
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#define LENGTH_CODES 29
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/* number of length codes, not counting the special END_BLOCK code */
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#define LITERALS 256
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/* number of literal bytes 0..255 */
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#define L_CODES (LITERALS+1+LENGTH_CODES)
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/* number of Literal or Length codes, including the END_BLOCK code */
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#define D_CODES 30
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/* number of distance codes */
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#define BL_CODES 19
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/* number of codes used to transfer the bit lengths */
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#define HEAP_SIZE (2*L_CODES+1)
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/* maximum heap size */
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#define MAX_BITS 15
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/* All codes must not exceed MAX_BITS bits */
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#define INIT_STATE 42
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#define EXTRA_STATE 69
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#define NAME_STATE 73
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#define COMMENT_STATE 91
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#define HCRC_STATE 103
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#define BUSY_STATE 113
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#define FINISH_STATE 666
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/* Stream status */
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/* Data structure describing a single value and its code string. */
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typedef struct ct_data_s {
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union {
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ush freq; /* frequency count */
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ush code; /* bit string */
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} fc;
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union {
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ush dad; /* father node in Huffman tree */
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ush len; /* length of bit string */
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} dl;
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} FAR ct_data;
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#define Freq fc.freq
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#define Code fc.code
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#define Dad dl.dad
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#define Len dl.len
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typedef struct static_tree_desc_s static_tree_desc;
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typedef struct tree_desc_s {
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ct_data *dyn_tree; /* the dynamic tree */
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int max_code; /* largest code with non zero frequency */
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static_tree_desc *stat_desc; /* the corresponding static tree */
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} FAR tree_desc;
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typedef ush Pos;
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typedef Pos FAR Posf;
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typedef unsigned IPos;
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/* A Pos is an index in the character window. We use short instead of int to
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* save space in the various tables. IPos is used only for parameter passing.
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*/
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typedef struct internal_state {
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z_streamp strm; /* pointer back to this zlib stream */
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int status; /* as the name implies */
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Bytef *pending_buf; /* output still pending */
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ulg pending_buf_size; /* size of pending_buf */
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Bytef *pending_out; /* next pending byte to output to the stream */
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uInt pending; /* nb of bytes in the pending buffer */
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int wrap; /* bit 0 true for zlib, bit 1 true for gzip */
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gz_headerp gzhead; /* gzip header information to write */
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uInt gzindex; /* where in extra, name, or comment */
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Byte method; /* STORED (for zip only) or DEFLATED */
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int last_flush; /* value of flush param for previous deflate call */
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/* used by deflate.c: */
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uInt w_size; /* LZ77 window size (32K by default) */
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uInt w_bits; /* log2(w_size) (8..16) */
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uInt w_mask; /* w_size - 1 */
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Bytef *window;
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/* Sliding window. Input bytes are read into the second half of the window,
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* and move to the first half later to keep a dictionary of at least wSize
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* bytes. With this organization, matches are limited to a distance of
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* wSize-MAX_MATCH bytes, but this ensures that IO is always
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* performed with a length multiple of the block size. Also, it limits
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* the window size to 64K, which is quite useful on MSDOS.
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* To do: use the user input buffer as sliding window.
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*/
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ulg window_size;
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/* Actual size of window: 2*wSize, except when the user input buffer
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* is directly used as sliding window.
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*/
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Posf *prev;
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/* Link to older string with same hash index. To limit the size of this
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* array to 64K, this link is maintained only for the last 32K strings.
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* An index in this array is thus a window index modulo 32K.
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*/
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Posf *head; /* Heads of the hash chains or NIL. */
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uInt ins_h; /* hash index of string to be inserted */
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uInt hash_size; /* number of elements in hash table */
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uInt hash_bits; /* log2(hash_size) */
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uInt hash_mask; /* hash_size-1 */
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uInt hash_shift;
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/* Number of bits by which ins_h must be shifted at each input
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* step. It must be such that after MIN_MATCH steps, the oldest
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* byte no longer takes part in the hash key, that is:
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* hash_shift * MIN_MATCH >= hash_bits
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*/
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long block_start;
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/* Window position at the beginning of the current output block. Gets
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* negative when the window is moved backwards.
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*/
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uInt match_length; /* length of best match */
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IPos prev_match; /* previous match */
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int match_available; /* set if previous match exists */
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uInt strstart; /* start of string to insert */
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uInt match_start; /* start of matching string */
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uInt lookahead; /* number of valid bytes ahead in window */
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uInt prev_length;
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/* Length of the best match at previous step. Matches not greater than this
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* are discarded. This is used in the lazy match evaluation.
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*/
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uInt max_chain_length;
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/* To speed up deflation, hash chains are never searched beyond this
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* length. A higher limit improves compression ratio but degrades the
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* speed.
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*/
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uInt max_lazy_match;
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/* Attempt to find a better match only when the current match is strictly
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* smaller than this value. This mechanism is used only for compression
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* levels >= 4.
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*/
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# define max_insert_length max_lazy_match
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/* Insert new strings in the hash table only if the match length is not
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* greater than this length. This saves time but degrades compression.
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* max_insert_length is used only for compression levels <= 3.
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*/
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int level; /* compression level (1..9) */
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int strategy; /* favor or force Huffman coding*/
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uInt good_match;
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/* Use a faster search when the previous match is longer than this */
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int nice_match; /* Stop searching when current match exceeds this */
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/* used by trees.c: */
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/* Didn't use ct_data typedef below to supress compiler warning */
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struct ct_data_s dyn_ltree[HEAP_SIZE]; /* literal and length tree */
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struct ct_data_s dyn_dtree[2*D_CODES+1]; /* distance tree */
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struct ct_data_s bl_tree[2*BL_CODES+1]; /* Huffman tree for bit lengths */
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struct tree_desc_s l_desc; /* desc. for literal tree */
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struct tree_desc_s d_desc; /* desc. for distance tree */
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struct tree_desc_s bl_desc; /* desc. for bit length tree */
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ush bl_count[MAX_BITS+1];
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/* number of codes at each bit length for an optimal tree */
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int heap[2*L_CODES+1]; /* heap used to build the Huffman trees */
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int heap_len; /* number of elements in the heap */
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int heap_max; /* element of largest frequency */
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/* The sons of heap[n] are heap[2*n] and heap[2*n+1]. heap[0] is not used.
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* The same heap array is used to build all trees.
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*/
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uch depth[2*L_CODES+1];
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/* Depth of each subtree used as tie breaker for trees of equal frequency
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*/
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uchf *l_buf; /* buffer for literals or lengths */
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uInt lit_bufsize;
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/* Size of match buffer for literals/lengths. There are 4 reasons for
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* limiting lit_bufsize to 64K:
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* - frequencies can be kept in 16 bit counters
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* - if compression is not successful for the first block, all input
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* data is still in the window so we can still emit a stored block even
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* when input comes from standard input. (This can also be done for
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* all blocks if lit_bufsize is not greater than 32K.)
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* - if compression is not successful for a file smaller than 64K, we can
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* even emit a stored file instead of a stored block (saving 5 bytes).
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* This is applicable only for zip (not gzip or zlib).
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* - creating new Huffman trees less frequently may not provide fast
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* adaptation to changes in the input data statistics. (Take for
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* example a binary file with poorly compressible code followed by
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* a highly compressible string table.) Smaller buffer sizes give
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* fast adaptation but have of course the overhead of transmitting
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* trees more frequently.
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* - I can't count above 4
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*/
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uInt last_lit; /* running index in l_buf */
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ushf *d_buf;
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/* Buffer for distances. To simplify the code, d_buf and l_buf have
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* the same number of elements. To use different lengths, an extra flag
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* array would be necessary.
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*/
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ulg opt_len; /* bit length of current block with optimal trees */
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ulg static_len; /* bit length of current block with static trees */
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uInt matches; /* number of string matches in current block */
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int last_eob_len; /* bit length of EOB code for last block */
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#ifdef DEBUG
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ulg compressed_len; /* total bit length of compressed file mod 2^32 */
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ulg bits_sent; /* bit length of compressed data sent mod 2^32 */
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#endif
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ush bi_buf;
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/* Output buffer. bits are inserted starting at the bottom (least
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* significant bits).
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*/
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int bi_valid;
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/* Number of valid bits in bi_buf. All bits above the last valid bit
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* are always zero.
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*/
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} FAR deflate_state;
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/* Output a byte on the stream.
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* IN assertion: there is enough room in pending_buf.
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*/
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#define put_byte(s, c) {s->pending_buf[s->pending++] = (c);}
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#define MIN_LOOKAHEAD (MAX_MATCH+MIN_MATCH+1)
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/* Minimum amount of lookahead, except at the end of the input file.
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* See deflate.c for comments about the MIN_MATCH+1.
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*/
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#define MAX_DIST(s) ((s)->w_size-MIN_LOOKAHEAD)
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/* In order to simplify the code, particularly on 16 bit machines, match
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* distances are limited to MAX_DIST instead of WSIZE.
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*/
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/* in trees.c */
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void _tr_init OF((deflate_state *s));
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int _tr_tally OF((deflate_state *s, unsigned dist, unsigned lc));
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void _tr_flush_block OF((deflate_state *s, charf *buf, ulg stored_len,
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int eof));
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void _tr_align OF((deflate_state *s));
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void _tr_stored_block OF((deflate_state *s, charf *buf, ulg stored_len,
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int eof));
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#define d_code(dist) \
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((dist) < 256 ? _dist_code[dist] : _dist_code[256+((dist)>>7)])
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/* Mapping from a distance to a distance code. dist is the distance - 1 and
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* must not have side effects. _dist_code[256] and _dist_code[257] are never
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* used.
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*/
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#ifndef DEBUG
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/* Inline versions of _tr_tally for speed: */
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#if defined(GEN_TREES_H) || !defined(STDC)
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extern uch _length_code[];
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extern uch _dist_code[];
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#else
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extern const uch _length_code[];
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extern const uch _dist_code[];
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#endif
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# define _tr_tally_lit(s, c, flush) \
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{ uch cc = (c); \
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s->d_buf[s->last_lit] = 0; \
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s->l_buf[s->last_lit++] = cc; \
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s->dyn_ltree[cc].Freq++; \
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flush = (s->last_lit == s->lit_bufsize-1); \
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}
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# define _tr_tally_dist(s, distance, length, flush) \
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{ uch len = (length); \
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ush dist = (distance); \
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s->d_buf[s->last_lit] = dist; \
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s->l_buf[s->last_lit++] = len; \
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dist--; \
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s->dyn_ltree[_length_code[len]+LITERALS+1].Freq++; \
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s->dyn_dtree[d_code(dist)].Freq++; \
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flush = (s->last_lit == s->lit_bufsize-1); \
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}
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#else
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# define _tr_tally_lit(s, c, flush) flush = _tr_tally(s, 0, c)
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# define _tr_tally_dist(s, distance, length, flush) \
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flush = _tr_tally(s, distance, length)
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#endif
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#endif /* DEFLATE_H */
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@@ -0,0 +1,565 @@
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1
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/* example.c -- usage example of the zlib compression library
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2
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* Copyright (C) 1995-2004 Jean-loup Gailly.
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* For conditions of distribution and use, see copyright notice in zlib.h
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4
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*/
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5
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+
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6
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/* @(#) $Id$ */
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7
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+
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8
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#include <stdio.h>
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9
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#include "zlib.h"
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10
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+
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11
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#ifdef STDC
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12
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# include <string.h>
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13
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# include <stdlib.h>
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14
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#endif
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15
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+
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16
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#if defined(VMS) || defined(RISCOS)
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17
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# define TESTFILE "foo-gz"
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18
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#else
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19
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# define TESTFILE "foo.gz"
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20
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#endif
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21
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+
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22
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#define CHECK_ERR(err, msg) { \
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23
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if (err != Z_OK) { \
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fprintf(stderr, "%s error: %d\n", msg, err); \
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exit(1); \
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} \
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27
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}
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28
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+
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29
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const char hello[] = "hello, hello!";
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30
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/* "hello world" would be more standard, but the repeated "hello"
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* stresses the compression code better, sorry...
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32
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*/
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33
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+
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34
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const char dictionary[] = "hello";
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35
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uLong dictId; /* Adler32 value of the dictionary */
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36
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+
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37
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void test_compress OF((Byte *compr, uLong comprLen,
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38
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Byte *uncompr, uLong uncomprLen));
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39
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void test_gzio OF((const char *fname,
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40
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Byte *uncompr, uLong uncomprLen));
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41
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void test_deflate OF((Byte *compr, uLong comprLen));
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42
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void test_inflate OF((Byte *compr, uLong comprLen,
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43
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Byte *uncompr, uLong uncomprLen));
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44
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void test_large_deflate OF((Byte *compr, uLong comprLen,
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45
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Byte *uncompr, uLong uncomprLen));
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46
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void test_large_inflate OF((Byte *compr, uLong comprLen,
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47
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Byte *uncompr, uLong uncomprLen));
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48
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void test_flush OF((Byte *compr, uLong *comprLen));
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49
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void test_sync OF((Byte *compr, uLong comprLen,
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50
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Byte *uncompr, uLong uncomprLen));
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51
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void test_dict_deflate OF((Byte *compr, uLong comprLen));
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52
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void test_dict_inflate OF((Byte *compr, uLong comprLen,
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53
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Byte *uncompr, uLong uncomprLen));
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54
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int main OF((int argc, char *argv[]));
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55
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+
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/* ===========================================================================
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* Test compress() and uncompress()
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*/
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59
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void test_compress(compr, comprLen, uncompr, uncomprLen)
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Byte *compr, *uncompr;
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uLong comprLen, uncomprLen;
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62
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{
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63
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int err;
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uLong len = (uLong)strlen(hello)+1;
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65
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+
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66
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err = compress(compr, &comprLen, (const Bytef*)hello, len);
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67
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CHECK_ERR(err, "compress");
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68
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+
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69
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strcpy((char*)uncompr, "garbage");
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70
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+
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71
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err = uncompress(uncompr, &uncomprLen, compr, comprLen);
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72
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CHECK_ERR(err, "uncompress");
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73
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+
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74
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if (strcmp((char*)uncompr, hello)) {
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75
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fprintf(stderr, "bad uncompress\n");
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76
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exit(1);
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77
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} else {
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78
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printf("uncompress(): %s\n", (char *)uncompr);
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79
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}
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80
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}
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81
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+
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82
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+
/* ===========================================================================
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83
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* Test read/write of .gz files
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84
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*/
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85
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void test_gzio(fname, uncompr, uncomprLen)
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86
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const char *fname; /* compressed file name */
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87
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Byte *uncompr;
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88
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uLong uncomprLen;
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89
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{
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90
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#ifdef NO_GZCOMPRESS
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91
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fprintf(stderr, "NO_GZCOMPRESS -- gz* functions cannot compress\n");
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92
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#else
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93
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int err;
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94
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int len = (int)strlen(hello)+1;
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95
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gzFile file;
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96
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z_off_t pos;
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97
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+
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98
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file = gzopen(fname, "wb");
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99
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if (file == NULL) {
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100
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fprintf(stderr, "gzopen error\n");
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101
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exit(1);
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102
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}
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103
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gzputc(file, 'h');
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104
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if (gzputs(file, "ello") != 4) {
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105
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fprintf(stderr, "gzputs err: %s\n", gzerror(file, &err));
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106
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exit(1);
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107
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}
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108
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if (gzprintf(file, ", %s!", "hello") != 8) {
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109
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fprintf(stderr, "gzprintf err: %s\n", gzerror(file, &err));
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110
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exit(1);
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111
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}
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112
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gzseek(file, 1L, SEEK_CUR); /* add one zero byte */
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113
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gzclose(file);
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114
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+
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115
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file = gzopen(fname, "rb");
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116
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if (file == NULL) {
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117
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fprintf(stderr, "gzopen error\n");
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118
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exit(1);
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119
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}
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120
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strcpy((char*)uncompr, "garbage");
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121
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+
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122
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if (gzread(file, uncompr, (unsigned)uncomprLen) != len) {
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123
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fprintf(stderr, "gzread err: %s\n", gzerror(file, &err));
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124
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exit(1);
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125
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}
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126
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if (strcmp((char*)uncompr, hello)) {
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127
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fprintf(stderr, "bad gzread: %s\n", (char*)uncompr);
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exit(1);
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129
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} else {
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130
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printf("gzread(): %s\n", (char*)uncompr);
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131
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}
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132
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+
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133
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pos = gzseek(file, -8L, SEEK_CUR);
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134
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if (pos != 6 || gztell(file) != pos) {
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135
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fprintf(stderr, "gzseek error, pos=%ld, gztell=%ld\n",
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(long)pos, (long)gztell(file));
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137
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exit(1);
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138
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}
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139
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+
|
140
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if (gzgetc(file) != ' ') {
|
141
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fprintf(stderr, "gzgetc error\n");
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142
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exit(1);
|
143
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+
}
|
144
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+
|
145
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if (gzungetc(' ', file) != ' ') {
|
146
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fprintf(stderr, "gzungetc error\n");
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147
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exit(1);
|
148
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+
}
|
149
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+
|
150
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gzgets(file, (char*)uncompr, (int)uncomprLen);
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151
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if (strlen((char*)uncompr) != 7) { /* " hello!" */
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152
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fprintf(stderr, "gzgets err after gzseek: %s\n", gzerror(file, &err));
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153
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exit(1);
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154
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+
}
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155
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if (strcmp((char*)uncompr, hello + 6)) {
|
156
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fprintf(stderr, "bad gzgets after gzseek\n");
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157
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exit(1);
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158
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} else {
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159
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printf("gzgets() after gzseek: %s\n", (char*)uncompr);
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160
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}
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161
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+
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162
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gzclose(file);
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163
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#endif
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164
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}
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165
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+
|
166
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/* ===========================================================================
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167
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* Test deflate() with small buffers
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168
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*/
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169
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void test_deflate(compr, comprLen)
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170
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Byte *compr;
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uLong comprLen;
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172
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{
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173
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z_stream c_stream; /* compression stream */
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174
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int err;
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175
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uLong len = (uLong)strlen(hello)+1;
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176
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+
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177
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c_stream.zalloc = (alloc_func)0;
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c_stream.zfree = (free_func)0;
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179
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c_stream.opaque = (voidpf)0;
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180
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+
|
181
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err = deflateInit(&c_stream, Z_DEFAULT_COMPRESSION);
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182
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CHECK_ERR(err, "deflateInit");
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183
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+
|
184
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c_stream.next_in = (Bytef*)hello;
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185
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c_stream.next_out = compr;
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186
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+
|
187
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while (c_stream.total_in != len && c_stream.total_out < comprLen) {
|
188
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c_stream.avail_in = c_stream.avail_out = 1; /* force small buffers */
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189
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err = deflate(&c_stream, Z_NO_FLUSH);
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190
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CHECK_ERR(err, "deflate");
|
191
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}
|
192
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/* Finish the stream, still forcing small buffers: */
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193
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for (;;) {
|
194
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c_stream.avail_out = 1;
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195
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err = deflate(&c_stream, Z_FINISH);
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196
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if (err == Z_STREAM_END) break;
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197
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CHECK_ERR(err, "deflate");
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198
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}
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199
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+
|
200
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err = deflateEnd(&c_stream);
|
201
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CHECK_ERR(err, "deflateEnd");
|
202
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+
}
|
203
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+
|
204
|
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/* ===========================================================================
|
205
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* Test inflate() with small buffers
|
206
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*/
|
207
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void test_inflate(compr, comprLen, uncompr, uncomprLen)
|
208
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Byte *compr, *uncompr;
|
209
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uLong comprLen, uncomprLen;
|
210
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+
{
|
211
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+
int err;
|
212
|
+
z_stream d_stream; /* decompression stream */
|
213
|
+
|
214
|
+
strcpy((char*)uncompr, "garbage");
|
215
|
+
|
216
|
+
d_stream.zalloc = (alloc_func)0;
|
217
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+
d_stream.zfree = (free_func)0;
|
218
|
+
d_stream.opaque = (voidpf)0;
|
219
|
+
|
220
|
+
d_stream.next_in = compr;
|
221
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+
d_stream.avail_in = 0;
|
222
|
+
d_stream.next_out = uncompr;
|
223
|
+
|
224
|
+
err = inflateInit(&d_stream);
|
225
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+
CHECK_ERR(err, "inflateInit");
|
226
|
+
|
227
|
+
while (d_stream.total_out < uncomprLen && d_stream.total_in < comprLen) {
|
228
|
+
d_stream.avail_in = d_stream.avail_out = 1; /* force small buffers */
|
229
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+
err = inflate(&d_stream, Z_NO_FLUSH);
|
230
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+
if (err == Z_STREAM_END) break;
|
231
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CHECK_ERR(err, "inflate");
|
232
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+
}
|
233
|
+
|
234
|
+
err = inflateEnd(&d_stream);
|
235
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+
CHECK_ERR(err, "inflateEnd");
|
236
|
+
|
237
|
+
if (strcmp((char*)uncompr, hello)) {
|
238
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fprintf(stderr, "bad inflate\n");
|
239
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+
exit(1);
|
240
|
+
} else {
|
241
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+
printf("inflate(): %s\n", (char *)uncompr);
|
242
|
+
}
|
243
|
+
}
|
244
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+
|
245
|
+
/* ===========================================================================
|
246
|
+
* Test deflate() with large buffers and dynamic change of compression level
|
247
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+
*/
|
248
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+
void test_large_deflate(compr, comprLen, uncompr, uncomprLen)
|
249
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+
Byte *compr, *uncompr;
|
250
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uLong comprLen, uncomprLen;
|
251
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+
{
|
252
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+
z_stream c_stream; /* compression stream */
|
253
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+
int err;
|
254
|
+
|
255
|
+
c_stream.zalloc = (alloc_func)0;
|
256
|
+
c_stream.zfree = (free_func)0;
|
257
|
+
c_stream.opaque = (voidpf)0;
|
258
|
+
|
259
|
+
err = deflateInit(&c_stream, Z_BEST_SPEED);
|
260
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+
CHECK_ERR(err, "deflateInit");
|
261
|
+
|
262
|
+
c_stream.next_out = compr;
|
263
|
+
c_stream.avail_out = (uInt)comprLen;
|
264
|
+
|
265
|
+
/* At this point, uncompr is still mostly zeroes, so it should compress
|
266
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+
* very well:
|
267
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+
*/
|
268
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+
c_stream.next_in = uncompr;
|
269
|
+
c_stream.avail_in = (uInt)uncomprLen;
|
270
|
+
err = deflate(&c_stream, Z_NO_FLUSH);
|
271
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+
CHECK_ERR(err, "deflate");
|
272
|
+
if (c_stream.avail_in != 0) {
|
273
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+
fprintf(stderr, "deflate not greedy\n");
|
274
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+
exit(1);
|
275
|
+
}
|
276
|
+
|
277
|
+
/* Feed in already compressed data and switch to no compression: */
|
278
|
+
deflateParams(&c_stream, Z_NO_COMPRESSION, Z_DEFAULT_STRATEGY);
|
279
|
+
c_stream.next_in = compr;
|
280
|
+
c_stream.avail_in = (uInt)comprLen/2;
|
281
|
+
err = deflate(&c_stream, Z_NO_FLUSH);
|
282
|
+
CHECK_ERR(err, "deflate");
|
283
|
+
|
284
|
+
/* Switch back to compressing mode: */
|
285
|
+
deflateParams(&c_stream, Z_BEST_COMPRESSION, Z_FILTERED);
|
286
|
+
c_stream.next_in = uncompr;
|
287
|
+
c_stream.avail_in = (uInt)uncomprLen;
|
288
|
+
err = deflate(&c_stream, Z_NO_FLUSH);
|
289
|
+
CHECK_ERR(err, "deflate");
|
290
|
+
|
291
|
+
err = deflate(&c_stream, Z_FINISH);
|
292
|
+
if (err != Z_STREAM_END) {
|
293
|
+
fprintf(stderr, "deflate should report Z_STREAM_END\n");
|
294
|
+
exit(1);
|
295
|
+
}
|
296
|
+
err = deflateEnd(&c_stream);
|
297
|
+
CHECK_ERR(err, "deflateEnd");
|
298
|
+
}
|
299
|
+
|
300
|
+
/* ===========================================================================
|
301
|
+
* Test inflate() with large buffers
|
302
|
+
*/
|
303
|
+
void test_large_inflate(compr, comprLen, uncompr, uncomprLen)
|
304
|
+
Byte *compr, *uncompr;
|
305
|
+
uLong comprLen, uncomprLen;
|
306
|
+
{
|
307
|
+
int err;
|
308
|
+
z_stream d_stream; /* decompression stream */
|
309
|
+
|
310
|
+
strcpy((char*)uncompr, "garbage");
|
311
|
+
|
312
|
+
d_stream.zalloc = (alloc_func)0;
|
313
|
+
d_stream.zfree = (free_func)0;
|
314
|
+
d_stream.opaque = (voidpf)0;
|
315
|
+
|
316
|
+
d_stream.next_in = compr;
|
317
|
+
d_stream.avail_in = (uInt)comprLen;
|
318
|
+
|
319
|
+
err = inflateInit(&d_stream);
|
320
|
+
CHECK_ERR(err, "inflateInit");
|
321
|
+
|
322
|
+
for (;;) {
|
323
|
+
d_stream.next_out = uncompr; /* discard the output */
|
324
|
+
d_stream.avail_out = (uInt)uncomprLen;
|
325
|
+
err = inflate(&d_stream, Z_NO_FLUSH);
|
326
|
+
if (err == Z_STREAM_END) break;
|
327
|
+
CHECK_ERR(err, "large inflate");
|
328
|
+
}
|
329
|
+
|
330
|
+
err = inflateEnd(&d_stream);
|
331
|
+
CHECK_ERR(err, "inflateEnd");
|
332
|
+
|
333
|
+
if (d_stream.total_out != 2*uncomprLen + comprLen/2) {
|
334
|
+
fprintf(stderr, "bad large inflate: %ld\n", d_stream.total_out);
|
335
|
+
exit(1);
|
336
|
+
} else {
|
337
|
+
printf("large_inflate(): OK\n");
|
338
|
+
}
|
339
|
+
}
|
340
|
+
|
341
|
+
/* ===========================================================================
|
342
|
+
* Test deflate() with full flush
|
343
|
+
*/
|
344
|
+
void test_flush(compr, comprLen)
|
345
|
+
Byte *compr;
|
346
|
+
uLong *comprLen;
|
347
|
+
{
|
348
|
+
z_stream c_stream; /* compression stream */
|
349
|
+
int err;
|
350
|
+
uInt len = (uInt)strlen(hello)+1;
|
351
|
+
|
352
|
+
c_stream.zalloc = (alloc_func)0;
|
353
|
+
c_stream.zfree = (free_func)0;
|
354
|
+
c_stream.opaque = (voidpf)0;
|
355
|
+
|
356
|
+
err = deflateInit(&c_stream, Z_DEFAULT_COMPRESSION);
|
357
|
+
CHECK_ERR(err, "deflateInit");
|
358
|
+
|
359
|
+
c_stream.next_in = (Bytef*)hello;
|
360
|
+
c_stream.next_out = compr;
|
361
|
+
c_stream.avail_in = 3;
|
362
|
+
c_stream.avail_out = (uInt)*comprLen;
|
363
|
+
err = deflate(&c_stream, Z_FULL_FLUSH);
|
364
|
+
CHECK_ERR(err, "deflate");
|
365
|
+
|
366
|
+
compr[3]++; /* force an error in first compressed block */
|
367
|
+
c_stream.avail_in = len - 3;
|
368
|
+
|
369
|
+
err = deflate(&c_stream, Z_FINISH);
|
370
|
+
if (err != Z_STREAM_END) {
|
371
|
+
CHECK_ERR(err, "deflate");
|
372
|
+
}
|
373
|
+
err = deflateEnd(&c_stream);
|
374
|
+
CHECK_ERR(err, "deflateEnd");
|
375
|
+
|
376
|
+
*comprLen = c_stream.total_out;
|
377
|
+
}
|
378
|
+
|
379
|
+
/* ===========================================================================
|
380
|
+
* Test inflateSync()
|
381
|
+
*/
|
382
|
+
void test_sync(compr, comprLen, uncompr, uncomprLen)
|
383
|
+
Byte *compr, *uncompr;
|
384
|
+
uLong comprLen, uncomprLen;
|
385
|
+
{
|
386
|
+
int err;
|
387
|
+
z_stream d_stream; /* decompression stream */
|
388
|
+
|
389
|
+
strcpy((char*)uncompr, "garbage");
|
390
|
+
|
391
|
+
d_stream.zalloc = (alloc_func)0;
|
392
|
+
d_stream.zfree = (free_func)0;
|
393
|
+
d_stream.opaque = (voidpf)0;
|
394
|
+
|
395
|
+
d_stream.next_in = compr;
|
396
|
+
d_stream.avail_in = 2; /* just read the zlib header */
|
397
|
+
|
398
|
+
err = inflateInit(&d_stream);
|
399
|
+
CHECK_ERR(err, "inflateInit");
|
400
|
+
|
401
|
+
d_stream.next_out = uncompr;
|
402
|
+
d_stream.avail_out = (uInt)uncomprLen;
|
403
|
+
|
404
|
+
inflate(&d_stream, Z_NO_FLUSH);
|
405
|
+
CHECK_ERR(err, "inflate");
|
406
|
+
|
407
|
+
d_stream.avail_in = (uInt)comprLen-2; /* read all compressed data */
|
408
|
+
err = inflateSync(&d_stream); /* but skip the damaged part */
|
409
|
+
CHECK_ERR(err, "inflateSync");
|
410
|
+
|
411
|
+
err = inflate(&d_stream, Z_FINISH);
|
412
|
+
if (err != Z_DATA_ERROR) {
|
413
|
+
fprintf(stderr, "inflate should report DATA_ERROR\n");
|
414
|
+
/* Because of incorrect adler32 */
|
415
|
+
exit(1);
|
416
|
+
}
|
417
|
+
err = inflateEnd(&d_stream);
|
418
|
+
CHECK_ERR(err, "inflateEnd");
|
419
|
+
|
420
|
+
printf("after inflateSync(): hel%s\n", (char *)uncompr);
|
421
|
+
}
|
422
|
+
|
423
|
+
/* ===========================================================================
|
424
|
+
* Test deflate() with preset dictionary
|
425
|
+
*/
|
426
|
+
void test_dict_deflate(compr, comprLen)
|
427
|
+
Byte *compr;
|
428
|
+
uLong comprLen;
|
429
|
+
{
|
430
|
+
z_stream c_stream; /* compression stream */
|
431
|
+
int err;
|
432
|
+
|
433
|
+
c_stream.zalloc = (alloc_func)0;
|
434
|
+
c_stream.zfree = (free_func)0;
|
435
|
+
c_stream.opaque = (voidpf)0;
|
436
|
+
|
437
|
+
err = deflateInit(&c_stream, Z_BEST_COMPRESSION);
|
438
|
+
CHECK_ERR(err, "deflateInit");
|
439
|
+
|
440
|
+
err = deflateSetDictionary(&c_stream,
|
441
|
+
(const Bytef*)dictionary, sizeof(dictionary));
|
442
|
+
CHECK_ERR(err, "deflateSetDictionary");
|
443
|
+
|
444
|
+
dictId = c_stream.adler;
|
445
|
+
c_stream.next_out = compr;
|
446
|
+
c_stream.avail_out = (uInt)comprLen;
|
447
|
+
|
448
|
+
c_stream.next_in = (Bytef*)hello;
|
449
|
+
c_stream.avail_in = (uInt)strlen(hello)+1;
|
450
|
+
|
451
|
+
err = deflate(&c_stream, Z_FINISH);
|
452
|
+
if (err != Z_STREAM_END) {
|
453
|
+
fprintf(stderr, "deflate should report Z_STREAM_END\n");
|
454
|
+
exit(1);
|
455
|
+
}
|
456
|
+
err = deflateEnd(&c_stream);
|
457
|
+
CHECK_ERR(err, "deflateEnd");
|
458
|
+
}
|
459
|
+
|
460
|
+
/* ===========================================================================
|
461
|
+
* Test inflate() with a preset dictionary
|
462
|
+
*/
|
463
|
+
void test_dict_inflate(compr, comprLen, uncompr, uncomprLen)
|
464
|
+
Byte *compr, *uncompr;
|
465
|
+
uLong comprLen, uncomprLen;
|
466
|
+
{
|
467
|
+
int err;
|
468
|
+
z_stream d_stream; /* decompression stream */
|
469
|
+
|
470
|
+
strcpy((char*)uncompr, "garbage");
|
471
|
+
|
472
|
+
d_stream.zalloc = (alloc_func)0;
|
473
|
+
d_stream.zfree = (free_func)0;
|
474
|
+
d_stream.opaque = (voidpf)0;
|
475
|
+
|
476
|
+
d_stream.next_in = compr;
|
477
|
+
d_stream.avail_in = (uInt)comprLen;
|
478
|
+
|
479
|
+
err = inflateInit(&d_stream);
|
480
|
+
CHECK_ERR(err, "inflateInit");
|
481
|
+
|
482
|
+
d_stream.next_out = uncompr;
|
483
|
+
d_stream.avail_out = (uInt)uncomprLen;
|
484
|
+
|
485
|
+
for (;;) {
|
486
|
+
err = inflate(&d_stream, Z_NO_FLUSH);
|
487
|
+
if (err == Z_STREAM_END) break;
|
488
|
+
if (err == Z_NEED_DICT) {
|
489
|
+
if (d_stream.adler != dictId) {
|
490
|
+
fprintf(stderr, "unexpected dictionary");
|
491
|
+
exit(1);
|
492
|
+
}
|
493
|
+
err = inflateSetDictionary(&d_stream, (const Bytef*)dictionary,
|
494
|
+
sizeof(dictionary));
|
495
|
+
}
|
496
|
+
CHECK_ERR(err, "inflate with dict");
|
497
|
+
}
|
498
|
+
|
499
|
+
err = inflateEnd(&d_stream);
|
500
|
+
CHECK_ERR(err, "inflateEnd");
|
501
|
+
|
502
|
+
if (strcmp((char*)uncompr, hello)) {
|
503
|
+
fprintf(stderr, "bad inflate with dict\n");
|
504
|
+
exit(1);
|
505
|
+
} else {
|
506
|
+
printf("inflate with dictionary: %s\n", (char *)uncompr);
|
507
|
+
}
|
508
|
+
}
|
509
|
+
|
510
|
+
/* ===========================================================================
|
511
|
+
* Usage: example [output.gz [input.gz]]
|
512
|
+
*/
|
513
|
+
|
514
|
+
int main(argc, argv)
|
515
|
+
int argc;
|
516
|
+
char *argv[];
|
517
|
+
{
|
518
|
+
Byte *compr, *uncompr;
|
519
|
+
uLong comprLen = 10000*sizeof(int); /* don't overflow on MSDOS */
|
520
|
+
uLong uncomprLen = comprLen;
|
521
|
+
static const char* myVersion = ZLIB_VERSION;
|
522
|
+
|
523
|
+
if (zlibVersion()[0] != myVersion[0]) {
|
524
|
+
fprintf(stderr, "incompatible zlib version\n");
|
525
|
+
exit(1);
|
526
|
+
|
527
|
+
} else if (strcmp(zlibVersion(), ZLIB_VERSION) != 0) {
|
528
|
+
fprintf(stderr, "warning: different zlib version\n");
|
529
|
+
}
|
530
|
+
|
531
|
+
printf("zlib version %s = 0x%04x, compile flags = 0x%lx\n",
|
532
|
+
ZLIB_VERSION, ZLIB_VERNUM, zlibCompileFlags());
|
533
|
+
|
534
|
+
compr = (Byte*)calloc((uInt)comprLen, 1);
|
535
|
+
uncompr = (Byte*)calloc((uInt)uncomprLen, 1);
|
536
|
+
/* compr and uncompr are cleared to avoid reading uninitialized
|
537
|
+
* data and to ensure that uncompr compresses well.
|
538
|
+
*/
|
539
|
+
if (compr == Z_NULL || uncompr == Z_NULL) {
|
540
|
+
printf("out of memory\n");
|
541
|
+
exit(1);
|
542
|
+
}
|
543
|
+
test_compress(compr, comprLen, uncompr, uncomprLen);
|
544
|
+
|
545
|
+
test_gzio((argc > 1 ? argv[1] : TESTFILE),
|
546
|
+
uncompr, uncomprLen);
|
547
|
+
|
548
|
+
test_deflate(compr, comprLen);
|
549
|
+
test_inflate(compr, comprLen, uncompr, uncomprLen);
|
550
|
+
|
551
|
+
test_large_deflate(compr, comprLen, uncompr, uncomprLen);
|
552
|
+
test_large_inflate(compr, comprLen, uncompr, uncomprLen);
|
553
|
+
|
554
|
+
test_flush(compr, &comprLen);
|
555
|
+
test_sync(compr, comprLen, uncompr, uncomprLen);
|
556
|
+
comprLen = uncomprLen;
|
557
|
+
|
558
|
+
test_dict_deflate(compr, comprLen);
|
559
|
+
test_dict_inflate(compr, comprLen, uncompr, uncomprLen);
|
560
|
+
|
561
|
+
free(compr);
|
562
|
+
free(uncompr);
|
563
|
+
|
564
|
+
return 0;
|
565
|
+
}
|