snappy 3.2__cp311-cp311-macosx_10_12_x86_64.whl
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- snappy/ptolemy/testing_files/s000__sl2_c1.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files/t00000__sl2_c0.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files/t00000__sl2_c1.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files/v0000__sl2_c0.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files/v0000__sl2_c1.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files/v0000__sl2_c2.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files/v0000__sl2_c3.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files_generalized/m003__sl2_c0.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files_generalized/m003__sl2_c1.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files_generalized/m003__sl3_c0.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files_generalized/m003__sl3_c1.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files_generalized/m004__sl2_c0.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files_generalized/m004__sl2_c1.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files_generalized/m015__sl2_c1.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files_generalized/m015__sl3_c0.magma_out.bz2 +0 -0
- snappy/ptolemy/testing_files_rur/m052__sl3_c0.rur.bz2 +0 -0
- snappy/ptolemy/utilities.py +236 -0
- snappy/raytracing/__init__.py +64 -0
- snappy/raytracing/additional_horospheres.py +64 -0
- snappy/raytracing/additional_len_spec_choices.py +63 -0
- snappy/raytracing/cohomology_fractal.py +197 -0
- snappy/raytracing/eyeball.py +123 -0
- snappy/raytracing/finite_raytracing_data.py +237 -0
- snappy/raytracing/finite_viewer.py +590 -0
- snappy/raytracing/geodesic_tube_info.py +174 -0
- snappy/raytracing/geodesics.py +246 -0
- snappy/raytracing/geodesics_window.py +258 -0
- snappy/raytracing/gui_utilities.py +293 -0
- snappy/raytracing/hyperboloid_navigation.py +556 -0
- snappy/raytracing/hyperboloid_utilities.py +234 -0
- snappy/raytracing/ideal_raytracing_data.py +592 -0
- snappy/raytracing/inside_viewer.py +974 -0
- snappy/raytracing/pack.py +22 -0
- snappy/raytracing/raytracing_data.py +126 -0
- snappy/raytracing/raytracing_view.py +454 -0
- snappy/raytracing/shaders/Eye.png +0 -0
- snappy/raytracing/shaders/NonGeometric.png +0 -0
- snappy/raytracing/shaders/__init__.py +101 -0
- snappy/raytracing/shaders/fragment.glsl +1744 -0
- snappy/raytracing/test.py +29 -0
- snappy/raytracing/tooltip.py +146 -0
- snappy/raytracing/upper_halfspace_utilities.py +98 -0
- snappy/raytracing/view_scale_controller.py +98 -0
- snappy/raytracing/zoom_slider/__init__.py +263 -0
- snappy/raytracing/zoom_slider/inward.png +0 -0
- snappy/raytracing/zoom_slider/inward18.png +0 -0
- snappy/raytracing/zoom_slider/outward.png +0 -0
- snappy/raytracing/zoom_slider/outward18.png +0 -0
- snappy/raytracing/zoom_slider/test.py +20 -0
- snappy/sage_helper.py +117 -0
- snappy/settings.py +409 -0
- snappy/shell.py +53 -0
- snappy/snap/__init__.py +114 -0
- snappy/snap/character_varieties.py +375 -0
- snappy/snap/find_field.py +372 -0
- snappy/snap/fundamental_polyhedron.py +569 -0
- snappy/snap/generators.py +39 -0
- snappy/snap/interval_reps.py +81 -0
- snappy/snap/kernel_structures.py +128 -0
- snappy/snap/mcomplex_base.py +18 -0
- snappy/snap/nsagetools.py +702 -0
- snappy/snap/peripheral/__init__.py +1 -0
- snappy/snap/peripheral/dual_cellulation.py +219 -0
- snappy/snap/peripheral/link.py +127 -0
- snappy/snap/peripheral/peripheral.py +159 -0
- snappy/snap/peripheral/surface.py +522 -0
- snappy/snap/peripheral/test.py +35 -0
- snappy/snap/polished_reps.py +335 -0
- snappy/snap/shapes.py +152 -0
- snappy/snap/slice_obs_HKL.py +668 -0
- snappy/snap/t3mlite/__init__.py +2 -0
- snappy/snap/t3mlite/arrow.py +243 -0
- snappy/snap/t3mlite/corner.py +22 -0
- snappy/snap/t3mlite/edge.py +172 -0
- snappy/snap/t3mlite/face.py +37 -0
- snappy/snap/t3mlite/files.py +211 -0
- snappy/snap/t3mlite/homology.py +53 -0
- snappy/snap/t3mlite/linalg.py +419 -0
- snappy/snap/t3mlite/mcomplex.py +1499 -0
- snappy/snap/t3mlite/perm4.py +320 -0
- snappy/snap/t3mlite/setup.py +12 -0
- snappy/snap/t3mlite/simplex.py +199 -0
- snappy/snap/t3mlite/spun.py +297 -0
- snappy/snap/t3mlite/surface.py +519 -0
- snappy/snap/t3mlite/test.py +20 -0
- snappy/snap/t3mlite/test_vs_regina.py +86 -0
- snappy/snap/t3mlite/tetrahedron.py +109 -0
- snappy/snap/t3mlite/vertex.py +42 -0
- snappy/snap/test.py +134 -0
- snappy/snap/utilities.py +288 -0
- snappy/test.py +209 -0
- snappy/test_cases.py +263 -0
- snappy/testing.py +131 -0
- snappy/tiling/__init__.py +2 -0
- snappy/tiling/canonical_key_dict.py +59 -0
- snappy/tiling/dict_based_set.py +79 -0
- snappy/tiling/floor.py +49 -0
- snappy/tiling/hyperboloid_dict.py +54 -0
- snappy/tiling/iter_utils.py +78 -0
- snappy/tiling/lifted_tetrahedron.py +22 -0
- snappy/tiling/lifted_tetrahedron_set.py +54 -0
- snappy/tiling/real_hash_dict.py +164 -0
- snappy/tiling/test.py +23 -0
- snappy/tiling/tile.py +215 -0
- snappy/tiling/triangle.py +33 -0
- snappy/tkterminal.py +920 -0
- snappy/twister/__init__.py +20 -0
- snappy/twister/main.py +646 -0
- snappy/twister/surfaces/S_0_1 +3 -0
- snappy/twister/surfaces/S_0_2 +3 -0
- snappy/twister/surfaces/S_0_4 +7 -0
- snappy/twister/surfaces/S_0_4_Lantern +8 -0
- snappy/twister/surfaces/S_1 +3 -0
- snappy/twister/surfaces/S_1_1 +4 -0
- snappy/twister/surfaces/S_1_2 +5 -0
- snappy/twister/surfaces/S_1_2_5 +6 -0
- snappy/twister/surfaces/S_2 +6 -0
- snappy/twister/surfaces/S_2_1 +8 -0
- snappy/twister/surfaces/S_2_heeg +10 -0
- snappy/twister/surfaces/S_3 +8 -0
- snappy/twister/surfaces/S_3_1 +10 -0
- snappy/twister/surfaces/S_4_1 +12 -0
- snappy/twister/surfaces/S_5_1 +14 -0
- snappy/twister/surfaces/heeg_fig8 +9 -0
- snappy/twister/twister_core.cpython-311-darwin.so +0 -0
- snappy/upper_halfspace/__init__.py +146 -0
- snappy/upper_halfspace/ideal_point.py +26 -0
- snappy/verify/__init__.py +13 -0
- snappy/verify/canonical.py +542 -0
- snappy/verify/complex_volume/__init__.py +18 -0
- snappy/verify/complex_volume/adjust_torsion.py +86 -0
- snappy/verify/complex_volume/closed.py +168 -0
- snappy/verify/complex_volume/compute_ptolemys.py +90 -0
- snappy/verify/complex_volume/cusped.py +56 -0
- snappy/verify/complex_volume/extended_bloch.py +201 -0
- snappy/verify/cusp_translations.py +85 -0
- snappy/verify/edge_equations.py +80 -0
- snappy/verify/exceptions.py +254 -0
- snappy/verify/hyperbolicity.py +224 -0
- snappy/verify/interval_newton_shapes_engine.py +523 -0
- snappy/verify/interval_tree.py +400 -0
- snappy/verify/krawczyk_shapes_engine.py +518 -0
- snappy/verify/maximal_cusp_area_matrix/__init__.py +46 -0
- snappy/verify/maximal_cusp_area_matrix/cusp_tiling_engine.py +419 -0
- snappy/verify/maximal_cusp_area_matrix/cusp_translate_engine.py +153 -0
- snappy/verify/real_algebra.py +286 -0
- snappy/verify/shapes.py +25 -0
- snappy/verify/short_slopes.py +200 -0
- snappy/verify/square_extensions.py +1005 -0
- snappy/verify/test.py +78 -0
- snappy/verify/upper_halfspace/__init__.py +9 -0
- snappy/verify/upper_halfspace/extended_matrix.py +100 -0
- snappy/verify/upper_halfspace/finite_point.py +283 -0
- snappy/verify/upper_halfspace/ideal_point.py +426 -0
- snappy/verify/volume.py +128 -0
- snappy/version.py +2 -0
- snappy-3.2.dist-info/METADATA +58 -0
- snappy-3.2.dist-info/RECORD +503 -0
- snappy-3.2.dist-info/WHEEL +5 -0
- snappy-3.2.dist-info/entry_points.txt +2 -0
- snappy-3.2.dist-info/top_level.txt +28 -0
snappy/cache.py
ADDED
@@ -0,0 +1,25 @@
|
|
1
|
+
class SnapPyCache(dict):
|
2
|
+
"""
|
3
|
+
Implementation of a simple cache used by the Manifold and Triangulation
|
4
|
+
to save the results of methods which require a significant amount of
|
5
|
+
computation.
|
6
|
+
|
7
|
+
This cache uses the tuple (method.__name, args, kwargs) as its key.
|
8
|
+
"""
|
9
|
+
debug = False
|
10
|
+
_clear = dict.clear
|
11
|
+
|
12
|
+
def save(self, answer, method_name, *args, **kwargs):
|
13
|
+
self[(method_name, args, tuple(kwargs.items()))] = answer
|
14
|
+
return answer
|
15
|
+
|
16
|
+
def lookup(self, method_name, *args, **kwargs):
|
17
|
+
return self[(method_name, args, tuple(kwargs.items()))]
|
18
|
+
|
19
|
+
def clear(self, key=None, message=''):
|
20
|
+
if self.debug:
|
21
|
+
print('_clear_cache: %s' % message)
|
22
|
+
if key is None:
|
23
|
+
self._clear()
|
24
|
+
else:
|
25
|
+
self.pop(key)
|
snappy/canonical.py
ADDED
@@ -0,0 +1,249 @@
|
|
1
|
+
from . import verify
|
2
|
+
from . import Triangulation, TriangulationHP, Manifold, ManifoldHP
|
3
|
+
|
4
|
+
from typing import Optional, Union, Sequence, Tuple
|
5
|
+
|
6
|
+
__all__ = ['canonical_retriangulation', 'canonical_retriangulation_hp']
|
7
|
+
|
8
|
+
def _canonical_retriangulation(
|
9
|
+
manifold : Union[Manifold, ManifoldHP],
|
10
|
+
verified : bool,
|
11
|
+
interval_bits_precs : Sequence[int],
|
12
|
+
exact_bits_prec_and_degrees : Sequence[Tuple[int, int]],
|
13
|
+
verbose : bool) -> Union[Triangulation, TriangulationHP,
|
14
|
+
Manifold, ManifoldHP]:
|
15
|
+
"""
|
16
|
+
Returns a triangulation canonically associated to the hyperbolic manifold.
|
17
|
+
That is, the triangulation is (up to combinatorial isomorphism relabeling
|
18
|
+
the tetrahedra and vertices) completely determined by the isometry type of
|
19
|
+
the hyperbolic manifold.
|
20
|
+
|
21
|
+
Manifolds with incomplete cusps are rejected (unlike in the case of
|
22
|
+
:meth:`isometry_signature <snappy.Manifold.isometry_signature>`).
|
23
|
+
|
24
|
+
We now describe the canonical retriangulation. If all cells of
|
25
|
+
the canonical cell decomposition (defined by `Epstein and Penner '88
|
26
|
+
<https://projecteuclid.org/euclid.jdg/1214441650>`_) are tetrahedral,
|
27
|
+
:meth:`canonical_retriangulation <Manifold.canonical_retriangulation>`
|
28
|
+
simply returns that ideal triangulation as a
|
29
|
+
:class:`Manifold <snappy.Manifold>`. Here is an example::
|
30
|
+
|
31
|
+
>>> M = Manifold("m015")
|
32
|
+
>>> K = M.canonical_retriangulation()
|
33
|
+
>>> K.has_finite_vertices()
|
34
|
+
False
|
35
|
+
>>> K.solution_type()
|
36
|
+
'all tetrahedra positively oriented'
|
37
|
+
|
38
|
+
If there are non-tetrahedral cells,
|
39
|
+
:meth:`canonical_retriangulation <Manifold.canonical_retriangulation>`
|
40
|
+
subdivides the canonical cell decomposition. It introduces a finite vertex
|
41
|
+
for each canonical cell resulting in a
|
42
|
+
:class:`Triangulation <snappy.Triangulation>`. Here is an example where the
|
43
|
+
canonical cell is a cube::
|
44
|
+
|
45
|
+
>>> M = Manifold("m412")
|
46
|
+
>>> K = M.canonical_retriangulation()
|
47
|
+
>>> K.has_finite_vertices()
|
48
|
+
True
|
49
|
+
|
50
|
+
The canonical retriangulation can be used to find the symmetries of a
|
51
|
+
single manifold. It also can compute the isometries between two
|
52
|
+
manifolds. We do this using
|
53
|
+
:meth:`isomorphisms_to <snappy.Triangulation.isomorphisms_to>`::
|
54
|
+
|
55
|
+
>>> M = Manifold("5_2").canonical_retriangulation()
|
56
|
+
>>> N = Manifold("m015").canonical_retriangulation()
|
57
|
+
>>> M.isomorphisms_to(M) #doctest: +ELLIPSIS
|
58
|
+
[0 -> 0
|
59
|
+
[1 0]
|
60
|
+
[0 1]
|
61
|
+
...
|
62
|
+
>>> M.isomorphisms_to(N) #doctest: +ELLIPSIS
|
63
|
+
[0 -> 0
|
64
|
+
[-1 2]
|
65
|
+
[ 0 -1]
|
66
|
+
...
|
67
|
+
|
68
|
+
The canonical retriangulation is also the basis for the
|
69
|
+
:meth:`isometry_signature <snappy.Manifold.isometry_signature>`.
|
70
|
+
|
71
|
+
**Subdivision**
|
72
|
+
|
73
|
+
If the canonical cell decomposition has a non-tetrahedral cell, the method
|
74
|
+
subdivides. You can think of the subdivision in either of the following
|
75
|
+
(equivalent) ways:
|
76
|
+
|
77
|
+
- A coarsening of the barycentric subdivision with only a quarter of the
|
78
|
+
number of tetrahedra. That is, take the barycentric subdivision and
|
79
|
+
merge the four tetrahedra adjacent to a barycentric edge connecting
|
80
|
+
an edge midpoint to a face midpoint.
|
81
|
+
- Taking the double suspension of each face (which is an ideal n-gon)
|
82
|
+
about the centers of the two neighboring 3-cells. Then split each
|
83
|
+
such topological "lens" into n tetrahedra along its central axis.
|
84
|
+
|
85
|
+
**Verified computations**
|
86
|
+
|
87
|
+
While the canonical retriangulation is combinatorial, some intermediate
|
88
|
+
computations are numerical. Thus, if :attr:`verified = False`,
|
89
|
+
floating-point issues can arise.
|
90
|
+
(Arguably this gave rise to a mistake in the
|
91
|
+
non-orientable census. ``x101`` and ``x103`` were later identified as
|
92
|
+
the same by `Burton '14 <http://arxiv.org/abs/1311.7615>`_.)
|
93
|
+
|
94
|
+
The method can be made :ref:`verified <verify-primer>` by passing
|
95
|
+
:attr:`verified = True`::
|
96
|
+
|
97
|
+
sage: M = Manifold("v2986")
|
98
|
+
sage: K = M.canonical_retriangulation(verified = True)
|
99
|
+
sage: K.has_finite_vertices() # Cell decomposition verified to be tetrahedral
|
100
|
+
False
|
101
|
+
sage: K.triangulation_isosig(decorated=False) # Verified isometry signature.
|
102
|
+
'jvLALQQdeefgihihiokcmmwwswg'
|
103
|
+
sage: len(K.isomorphisms_to(K)) # Verified to have no (non-trivial) symmetries.
|
104
|
+
1
|
105
|
+
|
106
|
+
Interval arithmetic can only be used to verify the canonical cell decomposition
|
107
|
+
if all cells are tetrahedral. For non-tetrahedral cells, the method
|
108
|
+
automatically switches to
|
109
|
+
exact methods to verify the canonical cell decomposition. That is, it uses
|
110
|
+
snap-like methods
|
111
|
+
(`LLL-algorithm <http://en.wikipedia.org/wiki/Lenstra%E2%80%93Lenstra%E2%80%93Lov%C3%A1sz_lattice_basis_reduction_algorithm>`_)
|
112
|
+
to guess a representation of the
|
113
|
+
shapes in the shape field. It then uses exact arithmetic to verify the
|
114
|
+
shapes form a valid geometric structure and compute the necessary tilts
|
115
|
+
to verify the canonical cell decomposition. Note that this can take a
|
116
|
+
long time!
|
117
|
+
|
118
|
+
Here is an example where exact methods are used::
|
119
|
+
|
120
|
+
sage: M = Manifold("m412")
|
121
|
+
sage: K = M.canonical_retriangulation(verified = True)
|
122
|
+
sage: K.has_finite_vertices() # Has non-tetrahedral cell
|
123
|
+
True
|
124
|
+
|
125
|
+
If the canonical retriangulation cannot be verified, an exception will be
|
126
|
+
raised. (Note that this is new (and safer) in Version 3.2. Prior to that
|
127
|
+
version, :meth:`Manifold.canonical_retriangulation` could return ``None``
|
128
|
+
instead.)
|
129
|
+
|
130
|
+
Here is an example where we skip the (potentially lengthy) exact methods
|
131
|
+
needed to verify a non-tetrahedral cell. The method fails (early
|
132
|
+
and with an exception) since the cells are actually tetrahedral::
|
133
|
+
|
134
|
+
sage: M = Manifold("m412")
|
135
|
+
sage: K = M.canonical_retriangulation(verified = True, exact_bits_prec_and_degrees = []) # doctest: +ELLIPSIS +IGNORE_EXCEPTION_DETAIL
|
136
|
+
Traceback (most recent call last):
|
137
|
+
...
|
138
|
+
snappy.verify.exceptions.TiltInequalityNumericalVerifyError: Numerical verification that tilt is negative has failed: ... < 0
|
139
|
+
|
140
|
+
:param verified:
|
141
|
+
Use :ref:`verified computation <verify-primer>`.
|
142
|
+
:param interval_bits_precs:
|
143
|
+
Only relevant if :attr:`verified = True`.
|
144
|
+
A list of (increasing) precisions used to try to
|
145
|
+
certify the canonical cell decomposition using intervals. Each
|
146
|
+
precision is tried until we succeed. If none succeeded, we move on
|
147
|
+
to exact methods.
|
148
|
+
:param exact_bits_prec_and_degrees:
|
149
|
+
Only relevant if :attr:`verified = True`.
|
150
|
+
A list of pairs (precision, max degree) used when the
|
151
|
+
LLL-algorithm is trying to find the defining
|
152
|
+
polynomial of the shape field with
|
153
|
+
``ListOfApproximateAlgebraicNumbers.find_field``.
|
154
|
+
Each pair is tried until we succeed.
|
155
|
+
:param verbose:
|
156
|
+
Print information about the methods tried to compute and verify the
|
157
|
+
canonical retriangulation.
|
158
|
+
:return:
|
159
|
+
If the canonical cell decomposition exists entirely of
|
160
|
+
(hyperbolic ideal) tetrahedra, a :class:`Manifold` with those
|
161
|
+
tetrahedra.
|
162
|
+
Otherwise, a :class:`Triangulation` that is a subdivision of the
|
163
|
+
canonical cell decomposition.
|
164
|
+
"""
|
165
|
+
|
166
|
+
# More information on the canonical retriangulation can be found in the
|
167
|
+
# SnapPea kernel ``canonize_part_2.c`` and in Section 3.1 of
|
168
|
+
# `Fominykh, Garoufalidis, Goerner, Tarkaev, Vesnin <http://arxiv.org/abs/1502.00383>`_.
|
169
|
+
|
170
|
+
if not all(manifold.cusp_info('complete?')):
|
171
|
+
# It is unclear what to do when there are filling coefficients.
|
172
|
+
# The SnapPea kernel ignores them and uses the complete structure
|
173
|
+
# to compute the canonical retriangulation.
|
174
|
+
#
|
175
|
+
# That makes sense to, e.g., compute a canonical representation
|
176
|
+
# of a surgery diagram.
|
177
|
+
#
|
178
|
+
# In other situations, it makes perfectly sense to fill the cusps
|
179
|
+
# instead. That is, e.g., what the isometry_signature does.
|
180
|
+
#
|
181
|
+
# Since it is ambiguous, I decided to simply reject it here.
|
182
|
+
#
|
183
|
+
# It is easy enough for a user to either call fill_triangulation
|
184
|
+
# or to save the coefficients and unfill all cusps.
|
185
|
+
#
|
186
|
+
raise ValueError(
|
187
|
+
'Canonical retriangulation needs all cusps to be complete.')
|
188
|
+
|
189
|
+
if verified:
|
190
|
+
# verified_canonical_retriangulation has code to check
|
191
|
+
# for incomplete cusps and fill them that never gets
|
192
|
+
# executed because of the above "if"
|
193
|
+
return verify.verified_canonical_retriangulation(
|
194
|
+
manifold,
|
195
|
+
interval_bits_precs=interval_bits_precs,
|
196
|
+
exact_bits_prec_and_degrees=exact_bits_prec_and_degrees,
|
197
|
+
verbose=verbose)
|
198
|
+
else:
|
199
|
+
# Note that the SnapPea kernel actually ignores Dehn-fillings
|
200
|
+
# when computing the canonical retriangulation.
|
201
|
+
if not all(manifold.cusp_info('complete?')):
|
202
|
+
# Never executed because of above "if".
|
203
|
+
manifold = manifold.filled_triangulation()
|
204
|
+
if not all(manifold.cusp_info('complete?')):
|
205
|
+
raise ValueError(
|
206
|
+
'Could not compute filled triangulation. '
|
207
|
+
'Are the filling coefficients co-prime integers?')
|
208
|
+
|
209
|
+
K = manifold._canonical_retriangulation()
|
210
|
+
if K.has_finite_vertices():
|
211
|
+
return K
|
212
|
+
else:
|
213
|
+
if isinstance(manifold, ManifoldHP):
|
214
|
+
return ManifoldHP(K)
|
215
|
+
else:
|
216
|
+
return Manifold(K)
|
217
|
+
|
218
|
+
# Wraps _canonical_retriangulation to have the correct return type
|
219
|
+
def canonical_retriangulation(
|
220
|
+
manifold : Manifold,
|
221
|
+
verified : bool = False,
|
222
|
+
interval_bits_precs : Sequence[int] = verify.default_interval_bits_precs,
|
223
|
+
exact_bits_prec_and_degrees : Sequence[Tuple[int, int]] = verify.default_exact_bits_prec_and_degrees,
|
224
|
+
verbose : bool = False) -> Union[Triangulation, Manifold]:
|
225
|
+
return _canonical_retriangulation(
|
226
|
+
manifold,
|
227
|
+
verified = verified,
|
228
|
+
interval_bits_precs = interval_bits_precs,
|
229
|
+
exact_bits_prec_and_degrees = exact_bits_prec_and_degrees,
|
230
|
+
verbose = verbose)
|
231
|
+
canonical_retriangulation.__doc__ = _canonical_retriangulation.__doc__
|
232
|
+
|
233
|
+
# Wraps _canonical_retriangulation to have the correct return type
|
234
|
+
def canonical_retriangulation_hp(
|
235
|
+
manifold : ManifoldHP,
|
236
|
+
verified : bool = False,
|
237
|
+
interval_bits_precs : Sequence[int] = verify.default_interval_bits_precs,
|
238
|
+
exact_bits_prec_and_degrees : Sequence[Tuple[int, int]] = verify.default_exact_bits_prec_and_degrees,
|
239
|
+
verbose : bool = False) -> Union[TriangulationHP, ManifoldHP]:
|
240
|
+
return _canonical_retriangulation(
|
241
|
+
manifold,
|
242
|
+
verified = verified,
|
243
|
+
interval_bits_precs = interval_bits_precs,
|
244
|
+
exact_bits_prec_and_degrees = exact_bits_prec_and_degrees,
|
245
|
+
verbose = verbose)
|
246
|
+
canonical_retriangulation_hp.__doc__ = _canonical_retriangulation.__doc__
|
247
|
+
|
248
|
+
|
249
|
+
|
snappy/cusps/__init__.py
ADDED
@@ -0,0 +1,38 @@
|
|
1
|
+
"""
|
2
|
+
Computing data about cusps such as cusp matrix, shape, translations
|
3
|
+
and exceptional slopes.
|
4
|
+
"""
|
5
|
+
|
6
|
+
from ..geometric_structure.cusp_neighborhood.complex_cusp_cross_section import ComplexCuspCrossSection
|
7
|
+
from ..verify.shapes import compute_hyperbolic_shapes
|
8
|
+
from ..exceptions import NonorientableManifoldError
|
9
|
+
|
10
|
+
def compute_cusp_shapes(manifold, verified, bits_prec=None):
|
11
|
+
"""
|
12
|
+
Compute cusp shapes. Following the SnapPea kernel convention,
|
13
|
+
it returns the conjugate of the quotient of the translations
|
14
|
+
corresponding to the longitude and meridian for each cusp.
|
15
|
+
|
16
|
+
>>> M = Manifold('s843')
|
17
|
+
>>> M.cusp_info('shape', bits_prec = 100) # doctest: +NUMERIC21
|
18
|
+
[0.46738227586341496791816972792 + 1.1903600506742881207098973751*I, 0.084187324414612694374797271558 + 1.0506945576790020048456757228*I]
|
19
|
+
|
20
|
+
sage: M = Manifold('s843')
|
21
|
+
sage: M.cusp_info('shape', verified = True) # doctest: +NUMERIC12
|
22
|
+
[0.46738227587? + 1.19036005068?*I, 0.0841873244146? + 1.0506945576790?*I]
|
23
|
+
|
24
|
+
sage: M.cusp_info('shape', verified = True, bits_prec = 100) # doctest: +NUMERIC21
|
25
|
+
[0.4673822758634149679181698? + 1.1903600506742881207098974?*I, 0.084187324414612694374797272? + 1.050694557679002004845675723?*I]
|
26
|
+
"""
|
27
|
+
|
28
|
+
if not manifold.is_orientable():
|
29
|
+
raise NonorientableManifoldError(manifold)
|
30
|
+
|
31
|
+
shapes = compute_hyperbolic_shapes(
|
32
|
+
manifold, verified=verified, bits_prec=bits_prec)
|
33
|
+
|
34
|
+
# Compute cusp cross section
|
35
|
+
c = ComplexCuspCrossSection.fromManifoldAndShapes(manifold, shapes)
|
36
|
+
|
37
|
+
# Compute shape
|
38
|
+
return c.cusp_shapes()
|
@@ -0,0 +1,101 @@
|
|
1
|
+
from .maximal_cusp_area_matrix import maximal_cusp_area_matrix
|
2
|
+
from .trig_cusp_area_matrix import triangulation_dependent_cusp_area_matrix
|
3
|
+
from ..verify.maximal_cusp_area_matrix import legacy_verified_maximal_cusp_area_matrix
|
4
|
+
|
5
|
+
from typing import Optional
|
6
|
+
|
7
|
+
def cusp_area_matrix(
|
8
|
+
manifold,
|
9
|
+
method : str = 'maximal',
|
10
|
+
verified : bool = False,
|
11
|
+
bits_prec : Optional[int] = None):
|
12
|
+
"""
|
13
|
+
Returns the maximal cusp area matrix :math:`(A_{ij})` where
|
14
|
+
:math:`A_{ij}` is defined as follows.
|
15
|
+
Let :math:`C_i` and :math:`C_j` be the (open) cusp neighborhoods about cusp
|
16
|
+
:math:`i` and :math:`j`. Let :math:`A(C_i)` and :math:`A(C_j)` be the
|
17
|
+
areas of :math:`C_i` and :math:`C_j`, respectively. Then, :math:`C_i`
|
18
|
+
and :math:`C_j` are embedded (if :math:`i = j`) or disjoint (otherwise)
|
19
|
+
if and only if :math:`A(C_i)A(C_j) \\leq A_{ij}`.
|
20
|
+
|
21
|
+
Here is an example::
|
22
|
+
|
23
|
+
>>> M = Manifold("L6a5")
|
24
|
+
>>> M.cusp_area_matrix() # doctest: +NUMERIC12
|
25
|
+
[27.9999999999996 7.00000000000000 7.00000000000000]
|
26
|
+
[7.00000000000000 27.9999999999999 7.00000000000000]
|
27
|
+
[7.00000000000000 7.00000000000000 28.0000000000001]
|
28
|
+
|
29
|
+
|
30
|
+
**Faster lower bounds**
|
31
|
+
|
32
|
+
This section can be skipped by most users!
|
33
|
+
|
34
|
+
Prior to SnapPy version 3.2, the algorithm to compute the maximal cusp
|
35
|
+
area matrix was much slower and required :attr:`verified = True` and
|
36
|
+
SageMath. Thus, in prior versions, :attr:`method` defaulted to
|
37
|
+
``trigDependentTryCanonize``. This meant, that, by default,
|
38
|
+
:meth:`~snappy.Manifold.cusp_area_matrix` only returned
|
39
|
+
(some) lower bounds for the maximal cusp area matrix entries.
|
40
|
+
|
41
|
+
These lower bounds can still be accessed::
|
42
|
+
|
43
|
+
>>> M.cusp_area_matrix(method = 'trigDependentTryCanonize') # doctest: +NUMERIC12
|
44
|
+
[21.4375000000000 7.00000000000000 7.00000000000000]
|
45
|
+
[7.00000000000000 28.0000000000000 7.00000000000000]
|
46
|
+
[7.00000000000000 7.00000000000000 28.0000000000000]
|
47
|
+
|
48
|
+
If :attr:`method = 'trigDependent'` or
|
49
|
+
:attr:`method = 'trigDependenyTryCanonize'`, the result is triangulation
|
50
|
+
dependent or not even deterministic, respectively.
|
51
|
+
Furthermore, if :attr:`verified = True` is also set, while the left
|
52
|
+
endpoints of the intervals are lower bounds for the maximal cusp area
|
53
|
+
matrix entries, the right endpoints are meaningless and could be smaller
|
54
|
+
or larger than the maximal cusp area matrix entries.
|
55
|
+
|
56
|
+
**Verified computation**
|
57
|
+
|
58
|
+
If :attr:`verified = False`, floating-point issues can arise resulting in
|
59
|
+
incorrect values. The method can be made
|
60
|
+
:ref:`verified <verify-primer>` by passing :attr:`verified = True`::
|
61
|
+
|
62
|
+
sage: M.cusp_area_matrix(verified=True) # doctest: +NUMERIC3
|
63
|
+
[ 28.0000? 7.000000000000? 7.00000000000?]
|
64
|
+
[7.000000000000? 28.000000? 7.00000000000?]
|
65
|
+
[ 7.00000000000? 7.00000000000? 28.00000?]
|
66
|
+
|
67
|
+
:param verified:
|
68
|
+
Use :ref:`verified computation <verify-primer>`.
|
69
|
+
:param bits_prec:
|
70
|
+
Precision used for computation. Increase if computation
|
71
|
+
did not succeed or a more precise result is desired.
|
72
|
+
:param method:
|
73
|
+
Switches to older algorithms giving lower bounds when
|
74
|
+
``trigDependentTryCanonize`` and ``trigDependent``.
|
75
|
+
:return:
|
76
|
+
Maximal cusp area matrix (default) or lower bounds
|
77
|
+
(if :attr:`method` switches to older algorithm).
|
78
|
+
"""
|
79
|
+
|
80
|
+
if method == 'maximal':
|
81
|
+
return maximal_cusp_area_matrix(
|
82
|
+
manifold, bits_prec=bits_prec, verified=verified)
|
83
|
+
if method == 'maximalLegacy':
|
84
|
+
if not verified:
|
85
|
+
raise NotImplementedError("Maximal cusp area matrix only "
|
86
|
+
"available as verified computation. "
|
87
|
+
"Pass verified = True.")
|
88
|
+
return legacy_verified_maximal_cusp_area_matrix(
|
89
|
+
manifold, bits_prec=bits_prec)
|
90
|
+
if method in ['trigDependent', 'trigDependentTryCanonize']:
|
91
|
+
if method == 'trigDependentTryCanonize':
|
92
|
+
manifold = manifold.copy()
|
93
|
+
manifold.canonize()
|
94
|
+
|
95
|
+
return triangulation_dependent_cusp_area_matrix(
|
96
|
+
manifold, bits_prec=bits_prec, verified=verified)
|
97
|
+
|
98
|
+
raise ValueError("method passed to cusp_area_matrix must be "
|
99
|
+
"'trigDependent', 'trigDependentTryCanonize', "
|
100
|
+
"or 'maximal'.")
|
101
|
+
|
@@ -0,0 +1,173 @@
|
|
1
|
+
from ..math_basics import correct_min, is_RealIntervalFieldElement
|
2
|
+
|
3
|
+
__all__ = ['unbiased_cusp_areas_from_cusp_area_matrix',
|
4
|
+
'greedy_cusp_areas_from_cusp_area_matrix']
|
5
|
+
|
6
|
+
def unbiased_cusp_areas_from_cusp_area_matrix(cusp_area_matrix):
|
7
|
+
"""
|
8
|
+
|
9
|
+
Examples::
|
10
|
+
|
11
|
+
sage: from sage.all import matrix, RIF
|
12
|
+
sage: unbiased_cusp_areas_from_cusp_area_matrix(
|
13
|
+
... matrix([[RIF(9.0,9.0005),RIF(6.0, 6.001)],
|
14
|
+
... [RIF(6.0,6.001 ),RIF(4.0, 4.001)]]))
|
15
|
+
[3.00?, 2.000?]
|
16
|
+
|
17
|
+
>>> from snappy.number import Number, number_to_native_number
|
18
|
+
>>> def N(x): return number_to_native_number(Number(x))
|
19
|
+
>>> from snappy.matrix import make_matrix
|
20
|
+
>>> unbiased_cusp_areas_from_cusp_area_matrix(
|
21
|
+
... make_matrix([[N(10.0), N(40.0)],
|
22
|
+
... [N(40.0), N(20.0)]])) # doctest: +NUMERIC9
|
23
|
+
[3.1622776601683795, 4.47213595499958]
|
24
|
+
|
25
|
+
"""
|
26
|
+
|
27
|
+
if is_RealIntervalFieldElement(cusp_area_matrix[0, 0]):
|
28
|
+
return _verified_unbiased_cusp_areas_from_cusp_area_matrix(
|
29
|
+
cusp_area_matrix)
|
30
|
+
|
31
|
+
return _unverified_unbiased_cusp_areas_from_cusp_area_matrix(
|
32
|
+
cusp_area_matrix)
|
33
|
+
|
34
|
+
|
35
|
+
def greedy_cusp_areas_from_cusp_area_matrix(cusp_area_matrix, first_cusps=[]):
|
36
|
+
"""
|
37
|
+
|
38
|
+
sage: from sage.all import matrix, RIF
|
39
|
+
sage: greedy_cusp_areas_from_cusp_area_matrix(
|
40
|
+
... matrix([[RIF(9.0,9.0005),RIF(6.0, 6.001)],
|
41
|
+
... [RIF(6.0,6.001 ),RIF(10.0, 10.001)]]))
|
42
|
+
[3.0001?, 2.000?]
|
43
|
+
|
44
|
+
>>> from snappy.number import Number, number_to_native_number
|
45
|
+
>>> def N(x): return number_to_native_number(Number(x))
|
46
|
+
>>> from snappy.matrix import make_matrix
|
47
|
+
>>> greedy_cusp_areas_from_cusp_area_matrix(
|
48
|
+
... make_matrix([[N(10.0), N(40.0)],
|
49
|
+
... [N(40.0), N(20.0)]])) # doctest: +NUMERIC9
|
50
|
+
[3.1622776601683795, 4.47213595499958]
|
51
|
+
|
52
|
+
"""
|
53
|
+
num_cusps = cusp_area_matrix.dimensions()[0]
|
54
|
+
|
55
|
+
result = list(range(num_cusps)) # Make space for range; initial values irrelevant
|
56
|
+
|
57
|
+
# Cusp permutation given in Cayley notation
|
58
|
+
sigma = first_cusps + [ i for i in range(num_cusps) if i not in first_cusps ]
|
59
|
+
|
60
|
+
for i in range(num_cusps):
|
61
|
+
stoppers = [ cusp_area_matrix[sigma[i], sigma[j]] / result[sigma[j]]
|
62
|
+
for j in range(i) ]
|
63
|
+
self_stopper = cusp_area_matrix[sigma[i], sigma[i]].sqrt()
|
64
|
+
|
65
|
+
result[sigma[i]] = correct_min(stoppers + [ self_stopper ])
|
66
|
+
|
67
|
+
return result
|
68
|
+
|
69
|
+
|
70
|
+
def _interval_minimum_candidates(intervals_and_extras):
|
71
|
+
result = [intervals_and_extras[0]]
|
72
|
+
for this in intervals_and_extras[1:]:
|
73
|
+
t0 = this[0]
|
74
|
+
if not all(t0 > other[0] for other in result):
|
75
|
+
if all(t0 < other[0] for other in result):
|
76
|
+
result = [this]
|
77
|
+
else:
|
78
|
+
result.append(this)
|
79
|
+
return result
|
80
|
+
|
81
|
+
|
82
|
+
def _find_potential_stoppers(cusp_area_matrix, assigned_areas):
|
83
|
+
def stopper(i, j):
|
84
|
+
if not assigned_areas[i] is None:
|
85
|
+
return cusp_area_matrix[i, j] / assigned_areas[i]
|
86
|
+
if not assigned_areas[j] is None:
|
87
|
+
return cusp_area_matrix[i, j] / assigned_areas[j]
|
88
|
+
return cusp_area_matrix[i, j].sqrt()
|
89
|
+
|
90
|
+
num_cusps = cusp_area_matrix.dimensions()[0]
|
91
|
+
|
92
|
+
return [(stopper(i, j), (i, j))
|
93
|
+
for i in range(num_cusps)
|
94
|
+
for j in range(i, num_cusps)
|
95
|
+
if (assigned_areas[j] is None) or (assigned_areas[i] is None)]
|
96
|
+
|
97
|
+
|
98
|
+
def _find_stoppers(cusp_area_matrix, assigned_areas):
|
99
|
+
return _interval_minimum_candidates(
|
100
|
+
_find_potential_stoppers(cusp_area_matrix, assigned_areas))
|
101
|
+
|
102
|
+
|
103
|
+
def _union_intervals(intervals):
|
104
|
+
result = intervals[0]
|
105
|
+
for i in intervals[1:]:
|
106
|
+
result = result.union(i)
|
107
|
+
return result
|
108
|
+
|
109
|
+
|
110
|
+
def _get_cusps_from_stoppers(stoppers, assigned_areas):
|
111
|
+
result = set()
|
112
|
+
for stopper in stoppers:
|
113
|
+
for cusp in stopper[1]:
|
114
|
+
if assigned_areas[cusp] is None:
|
115
|
+
result.add(cusp)
|
116
|
+
return result
|
117
|
+
|
118
|
+
|
119
|
+
def _verified_unbiased_cusp_areas_from_cusp_area_matrix(cusp_area_matrix):
|
120
|
+
|
121
|
+
num_cusps = cusp_area_matrix.dimensions()[0]
|
122
|
+
|
123
|
+
result = num_cusps * [None]
|
124
|
+
|
125
|
+
while None in result:
|
126
|
+
stoppers = _find_stoppers(cusp_area_matrix, result)
|
127
|
+
|
128
|
+
stoppers_union = _union_intervals([stopper[0] for stopper in stoppers])
|
129
|
+
cusps = _get_cusps_from_stoppers(stoppers, result)
|
130
|
+
stopper_pairs = {stopper[1] for stopper in stoppers}
|
131
|
+
|
132
|
+
stop_size = (stoppers_union * stoppers_union) / stoppers_union
|
133
|
+
|
134
|
+
for area in result:
|
135
|
+
if not area < stop_size:
|
136
|
+
raise Exception("New area smaller than existing areas")
|
137
|
+
|
138
|
+
for cusp in cusps:
|
139
|
+
result[cusp] = stop_size
|
140
|
+
|
141
|
+
for i in range(num_cusps):
|
142
|
+
for j in range(i, num_cusps):
|
143
|
+
if i in cusps or j in cusps:
|
144
|
+
if (not result[i] is None) and (not result[j] is None):
|
145
|
+
if not (i,j) in stopper_pairs:
|
146
|
+
if not result[i] * result[j] < cusp_area_matrix[i,j]:
|
147
|
+
raise Exception("Violated maximal cusp area", i, j)
|
148
|
+
|
149
|
+
return result
|
150
|
+
|
151
|
+
|
152
|
+
def _find_minimal_stopper(cusp_area_matrix, assigned_areas):
|
153
|
+
return min(_find_potential_stoppers(cusp_area_matrix, assigned_areas))
|
154
|
+
|
155
|
+
|
156
|
+
def _unverified_unbiased_cusp_areas_from_cusp_area_matrix(cusp_area_matrix):
|
157
|
+
num_cusps = cusp_area_matrix.dimensions()[0]
|
158
|
+
num_pending = num_cusps
|
159
|
+
|
160
|
+
result = num_cusps * [None]
|
161
|
+
|
162
|
+
while num_pending > 0:
|
163
|
+
stop_size, (i, j) = _find_minimal_stopper(cusp_area_matrix, result)
|
164
|
+
|
165
|
+
if result[i] is None:
|
166
|
+
result[i] = stop_size
|
167
|
+
num_pending -= 1
|
168
|
+
if i != j:
|
169
|
+
if result[j] is None:
|
170
|
+
result[j] = stop_size
|
171
|
+
num_pending -= 1
|
172
|
+
|
173
|
+
return result
|