snappy 3.2__cp311-cp311-macosx_10_12_x86_64.whl

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  1. snappy/CyOpenGL.cpython-311-darwin.so +0 -0
  2. snappy/SnapPy.cpython-311-darwin.so +0 -0
  3. snappy/SnapPy.ico +0 -0
  4. snappy/SnapPy.png +0 -0
  5. snappy/SnapPyHP.cpython-311-darwin.so +0 -0
  6. snappy/__init__.py +760 -0
  7. snappy/app.py +605 -0
  8. snappy/app_menus.py +372 -0
  9. snappy/browser.py +998 -0
  10. snappy/cache.py +25 -0
  11. snappy/canonical.py +249 -0
  12. snappy/cusps/__init__.py +38 -0
  13. snappy/cusps/cusp_area_matrix.py +101 -0
  14. snappy/cusps/cusp_areas_from_matrix.py +173 -0
  15. snappy/cusps/maximal_cusp_area_matrix.py +136 -0
  16. snappy/cusps/test.py +21 -0
  17. snappy/cusps/trig_cusp_area_matrix.py +63 -0
  18. snappy/database.py +454 -0
  19. snappy/db_utilities.py +79 -0
  20. snappy/decorated_isosig.py +710 -0
  21. snappy/dev/__init__.py +0 -0
  22. snappy/dev/extended_ptolemy/__init__.py +8 -0
  23. snappy/dev/extended_ptolemy/closed.py +106 -0
  24. snappy/dev/extended_ptolemy/complexVolumesClosed.py +149 -0
  25. snappy/dev/extended_ptolemy/direct.py +42 -0
  26. snappy/dev/extended_ptolemy/extended.py +406 -0
  27. snappy/dev/extended_ptolemy/giac_helper.py +43 -0
  28. snappy/dev/extended_ptolemy/giac_rur.py +129 -0
  29. snappy/dev/extended_ptolemy/gluing.py +46 -0
  30. snappy/dev/extended_ptolemy/phc_wrapper.py +220 -0
  31. snappy/dev/extended_ptolemy/printMatrices.py +70 -0
  32. snappy/dev/vericlosed/__init__.py +1 -0
  33. snappy/dev/vericlosed/computeApproxHyperbolicStructureNew.py +159 -0
  34. snappy/dev/vericlosed/computeApproxHyperbolicStructureOrb.py +90 -0
  35. snappy/dev/vericlosed/computeVerifiedHyperbolicStructure.py +111 -0
  36. snappy/dev/vericlosed/gimbalLoopFinder.py +130 -0
  37. snappy/dev/vericlosed/hyperbolicStructure.py +313 -0
  38. snappy/dev/vericlosed/krawczykCertifiedEdgeLengthsEngine.py +165 -0
  39. snappy/dev/vericlosed/oneVertexTruncatedComplex.py +122 -0
  40. snappy/dev/vericlosed/orb/__init__.py +1 -0
  41. snappy/dev/vericlosed/orb/orb_solution_for_snappea_finite_triangulation_mac +0 -0
  42. snappy/dev/vericlosed/parseVertexGramMatrixFile.py +47 -0
  43. snappy/dev/vericlosed/polishApproxHyperbolicStructure.py +61 -0
  44. snappy/dev/vericlosed/test.py +54 -0
  45. snappy/dev/vericlosed/truncatedComplex.py +176 -0
  46. snappy/dev/vericlosed/verificationError.py +58 -0
  47. snappy/dev/vericlosed/verifyHyperbolicStructureEngine.py +177 -0
  48. snappy/doc/_images/SnapPy-196.png +0 -0
  49. snappy/doc/_images/geodesics.jpg +0 -0
  50. snappy/doc/_images/m004_paper_plane_on_systole.jpg +0 -0
  51. snappy/doc/_images/m125_paper_plane.jpg +0 -0
  52. snappy/doc/_images/mac.png +0 -0
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  56. snappy/doc/_images/ubuntu.png +0 -0
  57. snappy/doc/_images/win7.png +0 -0
  58. snappy/doc/_sources/additional_classes.rst.txt +40 -0
  59. snappy/doc/_sources/bugs.rst.txt +14 -0
  60. snappy/doc/_sources/censuses.rst.txt +51 -0
  61. snappy/doc/_sources/credits.rst.txt +75 -0
  62. snappy/doc/_sources/development.rst.txt +259 -0
  63. snappy/doc/_sources/index.rst.txt +182 -0
  64. snappy/doc/_sources/installing.rst.txt +247 -0
  65. snappy/doc/_sources/manifold.rst.txt +6 -0
  66. snappy/doc/_sources/manifoldhp.rst.txt +46 -0
  67. snappy/doc/_sources/news.rst.txt +355 -0
  68. snappy/doc/_sources/other.rst.txt +25 -0
  69. snappy/doc/_sources/platonic_census.rst.txt +20 -0
  70. snappy/doc/_sources/plink.rst.txt +102 -0
  71. snappy/doc/_sources/ptolemy.rst.txt +66 -0
  72. snappy/doc/_sources/ptolemy_classes.rst.txt +42 -0
  73. snappy/doc/_sources/ptolemy_examples1.rst.txt +298 -0
  74. snappy/doc/_sources/ptolemy_examples2.rst.txt +363 -0
  75. snappy/doc/_sources/ptolemy_examples3.rst.txt +301 -0
  76. snappy/doc/_sources/ptolemy_examples4.rst.txt +61 -0
  77. snappy/doc/_sources/ptolemy_prelim.rst.txt +105 -0
  78. snappy/doc/_sources/screenshots.rst.txt +21 -0
  79. snappy/doc/_sources/snap.rst.txt +87 -0
  80. snappy/doc/_sources/snappy.rst.txt +28 -0
  81. snappy/doc/_sources/spherogram.rst.txt +103 -0
  82. snappy/doc/_sources/todo.rst.txt +47 -0
  83. snappy/doc/_sources/triangulation.rst.txt +11 -0
  84. snappy/doc/_sources/tutorial.rst.txt +49 -0
  85. snappy/doc/_sources/verify.rst.txt +210 -0
  86. snappy/doc/_sources/verify_internals.rst.txt +79 -0
  87. snappy/doc/_static/SnapPy-horizontal-128.png +0 -0
  88. snappy/doc/_static/SnapPy.ico +0 -0
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  147. snappy/doc/_static/snappy_sphinx_rtd_theme.css +42 -0
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  153. snappy/doc/development.html +384 -0
  154. snappy/doc/genindex.html +1331 -0
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  157. snappy/doc/manifold.html +3452 -0
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  162. snappy/doc/platonic_census.html +375 -0
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  164. snappy/doc/ptolemy.html +254 -0
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  166. snappy/doc/ptolemy_examples1.html +409 -0
  167. snappy/doc/ptolemy_examples2.html +471 -0
  168. snappy/doc/ptolemy_examples3.html +414 -0
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  171. snappy/doc/py-modindex.html +165 -0
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  179. snappy/doc/triangulation.html +1584 -0
  180. snappy/doc/tutorial.html +159 -0
  181. snappy/doc/verify.html +330 -0
  182. snappy/doc/verify_internals.html +1235 -0
  183. snappy/drilling/__init__.py +456 -0
  184. snappy/drilling/barycentric.py +103 -0
  185. snappy/drilling/constants.py +5 -0
  186. snappy/drilling/crush.py +270 -0
  187. snappy/drilling/cusps.py +125 -0
  188. snappy/drilling/debug.py +242 -0
  189. snappy/drilling/epsilons.py +6 -0
  190. snappy/drilling/exceptions.py +55 -0
  191. snappy/drilling/moves.py +620 -0
  192. snappy/drilling/peripheral_curves.py +210 -0
  193. snappy/drilling/perturb.py +188 -0
  194. snappy/drilling/shorten.py +36 -0
  195. snappy/drilling/subdivide.py +274 -0
  196. snappy/drilling/test.py +23 -0
  197. snappy/drilling/test_cases.py +126 -0
  198. snappy/drilling/tracing.py +351 -0
  199. snappy/exceptions.py +26 -0
  200. snappy/export_stl.py +120 -0
  201. snappy/exterior_to_link/__init__.py +2 -0
  202. snappy/exterior_to_link/barycentric_geometry.py +463 -0
  203. snappy/exterior_to_link/exceptions.py +6 -0
  204. snappy/exterior_to_link/geodesic_map.json +14408 -0
  205. snappy/exterior_to_link/hyp_utils.py +112 -0
  206. snappy/exterior_to_link/link_projection.py +323 -0
  207. snappy/exterior_to_link/main.py +197 -0
  208. snappy/exterior_to_link/mcomplex_with_expansion.py +261 -0
  209. snappy/exterior_to_link/mcomplex_with_link.py +687 -0
  210. snappy/exterior_to_link/mcomplex_with_memory.py +162 -0
  211. snappy/exterior_to_link/pl_utils.py +491 -0
  212. snappy/exterior_to_link/put_in_S3.py +156 -0
  213. snappy/exterior_to_link/rational_linear_algebra.py +123 -0
  214. snappy/exterior_to_link/rational_linear_algebra_wrapped.py +135 -0
  215. snappy/exterior_to_link/simplify_to_base_tri.py +114 -0
  216. snappy/exterior_to_link/stored_moves.py +475 -0
  217. snappy/exterior_to_link/test.py +31 -0
  218. snappy/filedialog.py +28 -0
  219. snappy/geometric_structure/__init__.py +212 -0
  220. snappy/geometric_structure/cusp_neighborhood/__init__.py +3 -0
  221. snappy/geometric_structure/cusp_neighborhood/complex_cusp_cross_section.py +697 -0
  222. snappy/geometric_structure/cusp_neighborhood/cusp_cross_section_base.py +484 -0
  223. snappy/geometric_structure/cusp_neighborhood/exceptions.py +42 -0
  224. snappy/geometric_structure/cusp_neighborhood/real_cusp_cross_section.py +298 -0
  225. snappy/geometric_structure/cusp_neighborhood/tiles_for_cusp_neighborhood.py +159 -0
  226. snappy/geometric_structure/cusp_neighborhood/vertices.py +32 -0
  227. snappy/geometric_structure/geodesic/__init__.py +0 -0
  228. snappy/geometric_structure/geodesic/add_core_curves.py +152 -0
  229. snappy/geometric_structure/geodesic/avoid_core_curves.py +369 -0
  230. snappy/geometric_structure/geodesic/canonical_keys.py +52 -0
  231. snappy/geometric_structure/geodesic/check_away_from_core_curve.py +60 -0
  232. snappy/geometric_structure/geodesic/constants.py +6 -0
  233. snappy/geometric_structure/geodesic/exceptions.py +22 -0
  234. snappy/geometric_structure/geodesic/fixed_points.py +93 -0
  235. snappy/geometric_structure/geodesic/geodesic_start_point_info.py +435 -0
  236. snappy/geometric_structure/geodesic/graph_trace_helper.py +67 -0
  237. snappy/geometric_structure/geodesic/line.py +30 -0
  238. snappy/geometric_structure/geodesic/multiplicity.py +127 -0
  239. snappy/geometric_structure/geodesic/tiles_for_geodesic.py +101 -0
  240. snappy/geometric_structure/test.py +22 -0
  241. snappy/gui.py +121 -0
  242. snappy/horoviewer.py +443 -0
  243. snappy/hyperboloid/__init__.py +212 -0
  244. snappy/hyperboloid/distances.py +245 -0
  245. snappy/hyperboloid/horoball.py +19 -0
  246. snappy/hyperboloid/line.py +35 -0
  247. snappy/hyperboloid/point.py +9 -0
  248. snappy/hyperboloid/triangle.py +29 -0
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  250. snappy/infowindow.py +65 -0
  251. snappy/isometry_signature.py +382 -0
  252. snappy/len_spec/__init__.py +596 -0
  253. snappy/len_spec/geodesic_info.py +110 -0
  254. snappy/len_spec/geodesic_key_info_dict.py +117 -0
  255. snappy/len_spec/geodesic_piece.py +143 -0
  256. snappy/len_spec/geometric_structure.py +182 -0
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  258. snappy/len_spec/length_spectrum_geodesic_info.py +170 -0
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  261. snappy/len_spec/test_cases.py +69 -0
  262. snappy/len_spec/tile.py +275 -0
  263. snappy/len_spec/word.py +86 -0
  264. snappy/manifolds/HTWKnots/alternating.gz +0 -0
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  277. snappy/ptolemy/fieldExtensions.py +153 -0
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  475. snappy/verify/complex_volume/compute_ptolemys.py +90 -0
  476. snappy/verify/complex_volume/cusped.py +56 -0
  477. snappy/verify/complex_volume/extended_bloch.py +201 -0
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  484. snappy/verify/krawczyk_shapes_engine.py +518 -0
  485. snappy/verify/maximal_cusp_area_matrix/__init__.py +46 -0
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  501. snappy-3.2.dist-info/WHEEL +5 -0
  502. snappy-3.2.dist-info/entry_points.txt +2 -0
  503. snappy-3.2.dist-info/top_level.txt +28 -0
@@ -0,0 +1,270 @@
1
+ from .cusps import CuspPostDrillInfo
2
+ from .peripheral_curves import install_peripheral_curves
3
+ from .barycentric import transpositions, perm_to_index
4
+
5
+ from ..snap.t3mlite import Tetrahedron, Perm4, Mcomplex, simplex
6
+
7
+ from typing import Set, Sequence
8
+
9
+ def crush_geodesic_pieces(tetrahedra : Sequence[Tetrahedron]) -> Mcomplex:
10
+ """
11
+ Given tetrahedra produced by traverse_geodesics_to_subdivide,
12
+ compute the barycentric subdivision and crush all subtetrahedra in the
13
+ barycentric subdivision that have been marked as being adjacent to an edge
14
+ that coincides with a GeodesicPiece.
15
+
16
+ The function mark_subtetrahedra_about_geodesic_pieces marks the
17
+ subtetrahedra as described above.
18
+ """
19
+
20
+ # We call the tetrahedra in the barycentric subdivision subtetrahedra
21
+ # to distinguish them from the original tetrahedra.
22
+
23
+ # We order the vertices of a subtetrahedra such that 0 corresponds to an
24
+ # original vertex, vertex 1 to an edge center, ... of a tetrahedron.
25
+ # This means that half of the subtetrahedra have the orientation
26
+ # reversed from the tetrahedron.
27
+
28
+ # While it is conceptually easier to think of creating the barycentric
29
+ # subdivision and then doing the crushing in two steps, we actually do
30
+ # not create a separate Mcomplex for the intermediate barycentric
31
+ # subdivison.
32
+
33
+ # Recall that each subtetrahedron in the barycentric subdivision
34
+ # is given by a pair of a tetrahedron tet and a permutation p.
35
+ # Using the index i that p has in Perm4.S4, we index
36
+ # a subtetrahedron by 24 * tet.Index + i.
37
+
38
+ # The subtetrahedra that are supposed to be curshed in the barycentric
39
+ # are assumed to be marked in tet.marked_subtetrahedra.
40
+ #
41
+ # Later, we also pick a subtetrahedron for each simple closed curve to
42
+ # compute a new meridian and longitude.
43
+
44
+ # Use bit mask to create the subtetrahedra surviving the crushing.
45
+ subtetrahedra = [
46
+ Tetrahedron() if marked_subtet == 0 else None
47
+ for tet in tetrahedra
48
+ for marked_subtet in tet.marked_subtetrahedra ]
49
+
50
+ _assign_orientations(subtetrahedra)
51
+
52
+ # Now glue the subtetrahedra in the crushed complex.
53
+ # Also carry forward post drill infos and peripheral curves.
54
+ for tet in tetrahedra:
55
+ for i, perm in enumerate(Perm4.S4()):
56
+ subtet_index = 24 * tet.Index + i
57
+ subtet = subtetrahedra[subtet_index]
58
+
59
+ if subtet is None:
60
+ continue
61
+
62
+ # The gluings internal (between subtetrahedra of the
63
+ # same tetrahedron)
64
+ for face in range(3):
65
+ other_perm = perm * transpositions[face]
66
+ j = perm_to_index(other_perm)
67
+ other_subtet_index = 24 * tet.Index + j
68
+ if face == 1 and tet.marked_subtetrahedra[j] != 0:
69
+ # We are processing subtetrahedron t and its
70
+ # neighbor c is adjacent to a GeodesicPiece (=)
71
+ # and thus it and its neighbor c' get crushed.
72
+ # Thus, we need to glue t to t'.
73
+ #
74
+ # 0
75
+ # /|\
76
+ # / | \
77
+ # / | \
78
+ # / | \
79
+ # 1* | *1
80
+ # / * | * \
81
+ # / t 2 t' \
82
+ # / * | * \
83
+ # / * | * \
84
+ # / * | * \
85
+ # / * c | c' * \
86
+ # / * | * \
87
+ # 0============1============0
88
+ #
89
+ other_perm = perm * Perm4((2,1,0,3))
90
+ j = perm_to_index(other_perm)
91
+ other_subtet_index = 24 * tet.Index + j
92
+ # attach is working symmetrically also setting the Neighbors
93
+ # and Gluings of the other tetrahedron, so only call it once
94
+ # per face-pairing
95
+ if j > i:
96
+ subtet.attach(simplex.TwoSubsimplices[face],
97
+ subtetrahedra[other_subtet_index],
98
+ (0,1,2,3))
99
+
100
+ # The external gluing.
101
+ vertex = perm.image(simplex.V0)
102
+ face = perm.image(simplex.F3)
103
+ other_tet = tet.Neighbor[face]
104
+ other_perm = tet.Gluing[face] * perm
105
+ j = perm_to_index(other_perm)
106
+ other_subtet_index = 24 * other_tet.Index + j
107
+ if other_subtet_index > subtet_index:
108
+ subtet.attach(simplex.F3,
109
+ subtetrahedra[other_subtet_index],
110
+ (0,1,2,3))
111
+
112
+ # Only vertex 0 corresponds to an original vertex.
113
+ # The other vertices will actually be finite, i.e., have
114
+ # spherical vertex links.
115
+ subtet.post_drill_infos = {
116
+ simplex.V0 : tet.post_drill_infos[vertex],
117
+ simplex.V1 : CuspPostDrillInfo(),
118
+ simplex.V2 : CuspPostDrillInfo(),
119
+ simplex.V3 : CuspPostDrillInfo() }
120
+
121
+ # Transfer peripheral curves. Note that for the same reason
122
+ # this is only relevant for vertex 0.
123
+ #
124
+ # Recall that SnapPea stores the peripheral curves on the
125
+ # half-edges of the dual 1-skeleton of the cusp triangulation.
126
+ #
127
+ # tet.PeripheralCurves is a structure similar to the one in the
128
+ # SnapPea kernel (see peripheral_curves.c for more info) nested
129
+ # as follows:
130
+ # - list for meridian and longitude
131
+ # - list for sheets in orientation double-cover of cusp triangle
132
+ # - dict with key being the vertex where the cusp triangle is
133
+ # - dict with key being a face of tetrahedron. The face intersects
134
+ # the cusp triangle in an edge. The value says how often the
135
+ # dual half-edge participates in the peripheral curve.
136
+ #
137
+ # After the barycentric subdivision, the original cusp triangle
138
+ # is split as shown:
139
+ #
140
+ # 1
141
+ # /|\
142
+ # / | \
143
+ # / | \
144
+ # / | \ The six new cusp triangles
145
+ # 2* | *2
146
+ # / * | * \
147
+ # / 3 \
148
+ # / * | * \
149
+ # / * | * \
150
+ # / * | * \
151
+ # / * | * \
152
+ # / * | * \
153
+ # 1------------2------------1
154
+ #
155
+ # We first transfer the original peripheral curves to the dual
156
+ # half-edges opposite vertex 3 in the above picture.
157
+ # The resulting chain will thus temporarily fail to be a cycle.
158
+ # Later, we fix the chains to be cycles again by adding values
159
+ # to the half-edges forming a circle about vertex 3 in the
160
+ # above picture - in _fix_all_peripheral_curves.
161
+
162
+ subtet.needs_peripheral_curves_fixed = False
163
+ subtet.PeripheralCurves = [
164
+ [ { v : { f : 0 for f in simplex.TwoSubsimplices }
165
+ for v in simplex.ZeroSubsimplices }
166
+ for sheet in range(2) ]
167
+ for ml in range(2) ]
168
+ for ml in range(2): # For meridian and longitude
169
+ for sheet in range(2): # For two-sheets in orientation-double cover
170
+ p = tet.PeripheralCurves[ml][sheet][vertex][face]
171
+ # Note that in the above picture, an edge of the original
172
+ # cusp triangle is split into two. Thus, we have two triangles
173
+ # to pick from when transferring the value of an old dualf
174
+ # half-edge to the new cusp triangles.
175
+ #
176
+ # We do these choices so that the cycle condition is at least
177
+ # fulfilled for the edges coinciding with the edges of the
178
+ # original cusp triangle.
179
+ if p > 0 and perm.sign() == 0:
180
+ subtet.PeripheralCurves[ml][sheet][simplex.V0][simplex.F3] = p
181
+ subtet.needs_peripheral_curves_fixed = True
182
+ elif p < 0 and perm.sign() == 1:
183
+ subtet.PeripheralCurves[ml][1 - sheet][simplex.V0][simplex.F3] = p
184
+
185
+ _fix_all_peripheral_curves(subtetrahedra)
186
+
187
+ # Find peripheral curves for each cusps created by crushing the simple
188
+ # closed curves.
189
+ # Record which of these cusps was already processed to only do this once
190
+ # per cusp.
191
+ new_cusp_indices : Set[int] = set()
192
+ for tet in tetrahedra:
193
+ for perm, orientation in zip(Perm4.S4(), tet.marked_subtetrahedra):
194
+ # We found a subtetrahedron adjacent to a geodesic piece.
195
+ #
196
+ # Make sure its 0-1 edge is parallel and not anti-parallel to
197
+ # the geodesic piece. This way the longitude will be parallel to
198
+ # the geodesic piece.
199
+ if orientation != +1:
200
+ continue
201
+ # Check orientation of subtetrahedron so that the orientation of
202
+ # the meridian relative to the longitude matches the orientation of the
203
+ # cusp.
204
+ if perm.sign() == 1:
205
+ continue
206
+ v : int = perm.image(simplex.V0)
207
+ cusp_index : int = tet.post_drill_infos[v].index
208
+ if cusp_index is None:
209
+ raise Exception("Vertex on geodesic has no assigned cusp")
210
+ if cusp_index in new_cusp_indices:
211
+ continue
212
+ # First time we encounter this simple closed curve. Pick a base
213
+ # tet to install the meridian and longitude.
214
+ # This base tet better not be one of the subtetrahedra that is
215
+ # crushed. So pick a neighbor of the subtetrahedron adjacent
216
+ # to the geodesic piece.
217
+ other_perm = perm * transpositions[1]
218
+ subtet_index = 24 * tet.Index + perm_to_index(other_perm)
219
+ install_peripheral_curves(subtetrahedra[subtet_index])
220
+ new_cusp_indices.add(cusp_index)
221
+
222
+ # To preserve the orientation, make sure that the first subtetrahedron
223
+ # we pass to Mcomplex has the same orientation as the original tetrahedron
224
+ # - since the SnapPea kernel will use the first tetrahedron of an
225
+ # orientable triangulation to orient it.
226
+ return Mcomplex([ subtet
227
+ for s in [0, 1]
228
+ for subtet in subtetrahedra
229
+ if subtet and subtet.orientation == s ])
230
+
231
+ def _assign_orientations(subtetrahedra):
232
+ for j in range(len(subtetrahedra) // 24):
233
+ for i, perm in enumerate(Perm4.S4()):
234
+ subtet_index = 24 * j + i
235
+ subtet = subtetrahedra[subtet_index]
236
+ if subtet:
237
+ subtet.orientation = perm.sign()
238
+
239
+
240
+ def _fix_peripheral_curves(subtet):
241
+ """
242
+ Traverse the six new cusp triangles shown in one
243
+ of the figures in crush_geodesic_pieces.
244
+ """
245
+ for i in range(6):
246
+ subtet.needs_peripheral_curves_fixed = False
247
+
248
+ if i % 2 == 0:
249
+ face0, face1 = simplex.F1, simplex.F2
250
+ else:
251
+ face0, face1 = simplex.F2, simplex.F1
252
+ neighbor = subtet.Neighbor[face1]
253
+ for ml in range(2):
254
+ for sheet in range(2):
255
+ tri = subtet.PeripheralCurves[ml][sheet][simplex.V0]
256
+ p = tri[face0] + tri[simplex.F3]
257
+ tri[face1] = -p
258
+ neighbor.PeripheralCurves[ml][1-sheet][simplex.V0][face1] = p
259
+ subtet = neighbor
260
+
261
+
262
+ def _fix_all_peripheral_curves(subtetrahedra):
263
+ """
264
+ Fix peripheral curves for all subtetrahedra that require it, see
265
+ crush_geodesic_pieces where the needs_peripheral_curves_fixed flag
266
+ was raised for details.
267
+ """
268
+ for subtet in subtetrahedra:
269
+ if subtet and subtet.needs_peripheral_curves_fixed:
270
+ _fix_peripheral_curves(subtet)
@@ -0,0 +1,125 @@
1
+ from ..geometric_structure.geodesic.geodesic_start_point_info import GeodesicStartPointInfo
2
+ from ..geometric_structure import Filling, FillingMatrix
3
+
4
+ from ..snap.t3mlite import Mcomplex, simplex
5
+
6
+ from . import exceptions
7
+
8
+ from typing import Tuple, Optional, Sequence
9
+
10
+ # @dataclass
11
+
12
+
13
+ class CuspPostDrillInfo:
14
+ """
15
+ Information carried around to be applied after drilling
16
+ the manifold when re-indexing the cusps, re-applying the
17
+ Dehn-fillings or changing the peripheral curve when drilling
18
+ a core curve.
19
+
20
+ Note that we store this information sometime on a
21
+ snappy.snap.t3mlite.Vertex as post_drill_info and sometimes
22
+ as a dictionary tet.post_drill_infos on each tetrahedron assigning
23
+ a CuspPostDrillInfo to each vertex of the tetrahedron. The latter
24
+ representation is more redundant as we need to store the same
25
+ CuspPostDrillInfo to each vertex of each tetrahedron belonging to
26
+ the same vertex class - but is also more convenient in certain
27
+ circumstances.
28
+ """
29
+
30
+ def __init__(self,
31
+ # Index this vertex will have in the drilled manifold.
32
+ # None if vertex is a finite vertex.
33
+ index : Optional[int] = None,
34
+ # Filling that needs to be applied after drilling the
35
+ # manifold. (0,0) if cusps will be left unfilled.
36
+ filling : Filling = (0, 0),
37
+ # Optional adjustment of peripheral curves performed
38
+ # to drilled manifold with Manifold.set_peripheral_curves.
39
+ peripheral_matrix : Optional[FillingMatrix] = None):
40
+ self.index = index
41
+ self.filling = filling
42
+ self.peripheral_matrix = peripheral_matrix
43
+
44
+ def __eq__(self, other):
45
+ """
46
+ Used for debugging.
47
+ """
48
+ return (self.index == self.index and
49
+ self.filling == self.filling and
50
+ self.peripheral_matrix == self.peripheral_matrix)
51
+
52
+
53
+ def index_geodesics_and_add_post_drill_infos(
54
+ geodesics : Sequence[GeodesicStartPointInfo],
55
+ mcomplex : Mcomplex) -> None:
56
+
57
+ all_reindexed_verts = {
58
+ g.core_curve_cusp for g in geodesics if g.core_curve_cusp}
59
+
60
+ old_vertices = [v for v in mcomplex.Vertices
61
+ if v not in all_reindexed_verts]
62
+
63
+ for i, v in enumerate(old_vertices):
64
+ v.post_drill_info = CuspPostDrillInfo(
65
+ index=i, filling=v.filling_matrix[0])
66
+
67
+ n = len(old_vertices)
68
+
69
+ for i, g in enumerate(geodesics):
70
+ if g.core_curve_cusp:
71
+ if g.core_curve_multiplicity not in [-1, +1]:
72
+ raise exceptions.GeodesicMultipleOfCoreCurve(
73
+ g.word, g.core_curve_multiplicity)
74
+
75
+ g.core_curve_cusp.post_drill_info = CuspPostDrillInfo(
76
+ index=n + i,
77
+ peripheral_matrix=_multiply_filling_matrix(
78
+ g.core_curve_cusp.filling_matrix,
79
+ g.core_curve_multiplicity))
80
+ else:
81
+ g.index = n + i
82
+
83
+ for tet in mcomplex.Tetrahedra:
84
+ tet.post_drill_infos = {
85
+ V : tet.Class[V].post_drill_info
86
+ for V in simplex.ZeroSubsimplices }
87
+
88
+
89
+ def reorder_vertices_and_get_post_drill_infos(
90
+ mcomplex : Mcomplex) -> Sequence[CuspPostDrillInfo]:
91
+
92
+ cusp_vertices_dict = { }
93
+ finite_vertices = [ ]
94
+ for vert in mcomplex.Vertices:
95
+ c = vert.Corners[0]
96
+ post_drill_info = c.Tetrahedron.post_drill_infos[c.Subsimplex]
97
+ vert.post_drill_info = post_drill_info
98
+ if post_drill_info.index is None:
99
+ finite_vertices.append(vert)
100
+ else:
101
+ cusp_vertices_dict[post_drill_info.index] = vert
102
+
103
+ cusp_vertices = [ cusp_vertices_dict[i]
104
+ for i in range(len(cusp_vertices_dict)) ]
105
+
106
+ mcomplex.Vertices = cusp_vertices + finite_vertices
107
+
108
+ return [ v.post_drill_info for v in cusp_vertices ]
109
+
110
+
111
+ def refill_and_adjust_peripheral_curves(
112
+ manifold,
113
+ post_drill_infos : Sequence[CuspPostDrillInfo]) -> None:
114
+
115
+ manifold.dehn_fill([ info.filling for info in post_drill_infos])
116
+
117
+ for info in post_drill_infos:
118
+ if info.peripheral_matrix is not None:
119
+ manifold.set_peripheral_curves(
120
+ info.peripheral_matrix, which_cusp=info.index)
121
+
122
+
123
+ def _multiply_filling_matrix(m : FillingMatrix, s : int) -> FillingMatrix:
124
+ return ((s * m[0][0], s * m[0][1]),
125
+ (s * m[1][0], s * m[1][1]))
@@ -0,0 +1,242 @@
1
+ from ..snap.t3mlite import simplex
2
+ from ..matrix import make_identity_matrix
3
+ from ..hyperboloid import *
4
+
5
+
6
+ def _find_all_tetrahedra(tet):
7
+ result = [ ]
8
+ pending_tets = [ tet ]
9
+ visited_tets = set()
10
+ while pending_tets:
11
+ tet = pending_tets.pop()
12
+ if tet not in visited_tets:
13
+ visited_tets.add(tet)
14
+ result.append(tet)
15
+ for neighbor in tet.Neighbor.values():
16
+ pending_tets.append(neighbor)
17
+ return result
18
+
19
+
20
+ def check_peripheral_curves(tets):
21
+ for tet in tets:
22
+ for f in simplex.TwoSubsimplices:
23
+ neighbor = tet.Neighbor[f]
24
+ gluing = tet.Gluing[f]
25
+ other_f = gluing.image(f)
26
+ sgn = gluing.sign()
27
+ for v in simplex.ZeroSubsimplices:
28
+ v_comp = simplex.comp(v)
29
+ other_v = gluing.image(v)
30
+ for ml in range(2):
31
+ for sheet_index in range(2):
32
+ sheet = tet.PeripheralCurves[ml][sheet_index][v]
33
+ if f == v_comp:
34
+ if sum(sheet.values()) != 0:
35
+ raise Exception("Not adding up to zero. %r" % tet)
36
+ if sheet[v_comp] != 0:
37
+ raise Exception("Diagonal entry for peripheral curve.")
38
+ else:
39
+ if sgn == 0:
40
+ other_sheet_index = 1 - sheet_index
41
+ else:
42
+ other_sheet_index = sheet_index
43
+ a = sheet[f]
44
+ b = neighbor.PeripheralCurves[ml][other_sheet_index][other_v][other_f]
45
+ if a + b != 0:
46
+ raise Exception("Peripheral curve not adding up.")
47
+
48
+
49
+ def check_vertex_indices(tets):
50
+ for tet in tets:
51
+ for v in simplex.ZeroSubsimplices:
52
+ index = tet.post_drill_infos[v]
53
+ for f in simplex.TwoSubsimplices:
54
+ if v & f:
55
+ if tet.Neighbor[f].post_drill_infos[tet.Gluing[f].image(v)] != index:
56
+ print("tet, v face:", tet, v, f)
57
+ print("index and other index:", index, tet.Neighbor[f].post_drill_infos, [tet.Gluing[f].image(v)])
58
+ raise Exception("Neighbors don't have same vertex.")
59
+
60
+
61
+ def check_points_equal(v0, v1):
62
+ RF = v0[0].parent()
63
+
64
+ if abs(r13_dot(v0, v0)) < RF(1e-10):
65
+ if abs(r13_dot(v1, v1)) > RF(1e-10):
66
+ raise Exception("Light-like vs time-like:", v0, v1)
67
+ if abs(r13_dot(v0, v1)) > RF(1e-10):
68
+ raise Exception("Non-colinlinear light like:", v0, v1)
69
+ else:
70
+ if any(abs(x - y) > RF(1e-10) for x, y in zip(v0, v1)):
71
+ raise Exception("Different time-like:", v0, v1)
72
+
73
+
74
+ def check_points_consistency(m):
75
+ for tet in m.Tetrahedra:
76
+ for F in simplex.TwoSubsimplices:
77
+ for V in simplex.ZeroSubsimplices:
78
+ if V & F:
79
+ check_points_equal(
80
+ tet.O13_matrices[F] * tet.R13_vertices[V],
81
+ tet.Neighbor[F].R13_vertices[tet.Gluing[F].image(V)])
82
+
83
+
84
+ def check_edge_consistency(m):
85
+ RF = m.Tetrahedra[0].O13_matrices[simplex.F0].base_ring()
86
+ id_matrix = make_identity_matrix(ring=RF, n=4)
87
+
88
+ for e in m.Edges:
89
+ t = id_matrix
90
+ for tet, perm in e.embeddings():
91
+ t = tet.O13_matrices[perm.image(simplex.F2)] * t
92
+ t = t - id_matrix
93
+ for i in range(4):
94
+ for j in range(4):
95
+ if abs(t[i,j]) > RF(1e-10):
96
+ raise Exception("Edge not gluing up")
97
+
98
+
99
+ def check_geodesic1(tets):
100
+ RF = tets[0].O13_matrices[simplex.F0].base_ring()
101
+
102
+ for tet in tets:
103
+ for geodesic_segment in tet.geodesic_pieces:
104
+ if geodesic_segment.tet is not tet:
105
+ raise Exception("Geodesic tet inconsistency")
106
+
107
+ for ptInClass in geodesic_segment.endpoints:
108
+ if ptInClass.subsimplex in simplex.ZeroSubsimplices:
109
+ check_points_equal(
110
+ ptInClass.r13_point,
111
+ tet.R13_vertices[ptInClass.subsimplex])
112
+ else:
113
+ if abs(r13_dot(ptInClass.r13_point, tet.R13_planes[ptInClass.subsimplex])) > RF(1e-10):
114
+ raise Exception("Point not on plane")
115
+
116
+
117
+ def check_consistency(mcomplex):
118
+ check_edge_consistency(mcomplex)
119
+ check_points_consistency(mcomplex)
120
+ check_geodesic1(mcomplex.Tetrahedra)
121
+
122
+
123
+ def check_consistency_segments(segments):
124
+ for i in range(len(segments)):
125
+ s0 = segments[i]
126
+ s1 = segments[(i+1) % len(segments)]
127
+
128
+ if s0.tet.Class[s0.endpoints[1].subsimplex] is not s1.tet.Class[s1.endpoints[0].subsimplex]:
129
+ raise Exception("Classes of consecutive segments not matching %i" % i)
130
+
131
+ if s0.next_ is not s1:
132
+ raise Exception("Linked list broken (next)")
133
+ if s1.prev is not s0:
134
+ raise Exception("Linked list broken (prev)")
135
+
136
+ if s0.endpoints[1].subsimplex in simplex.TwoSubsimplices:
137
+ check_points_equal(
138
+ s0.tet.O13_matrices[s0.endpoints[1].subsimplex] * s0.endpoints[1].r13_point,
139
+ s1.endpoints[0].r13_point)
140
+
141
+
142
+ def print_cell(f):
143
+ if f in simplex.ZeroSubsimplices:
144
+ return "V"
145
+ if f in simplex.TwoSubsimplices:
146
+ return "F"
147
+ if f == simplex.T:
148
+ return "T"
149
+ raise Exception("BLAH")
150
+
151
+
152
+ def output_linked(x, tets_set):
153
+ y = x
154
+ while True:
155
+ # print(y)
156
+ print(print_cell(y.endpoints[0].subsimplex) + "-----" + print_cell(y.endpoints[1].subsimplex), end=" ")
157
+ y = y.next_
158
+ if x is y:
159
+ break
160
+
161
+ print()
162
+
163
+ y = x
164
+ while True:
165
+ print("%2d---%2d" % (y.endpoints[0].subsimplex, y.endpoints[1].subsimplex), end=" ")
166
+ y = y.next_
167
+ if x is y:
168
+ break
169
+
170
+ print()
171
+
172
+ y = x
173
+ while True:
174
+ if y.tet in tets_set:
175
+ print(" * ", end=" ")
176
+ else:
177
+ print(" ", end=" ")
178
+ y = y.next_
179
+ if x is y:
180
+ break
181
+
182
+ print()
183
+ print()
184
+
185
+
186
+ def flatten_link_list(x):
187
+ y = x
188
+ l = []
189
+ while True:
190
+ l.append(y)
191
+ y = y.next_
192
+ if x is y:
193
+ return l
194
+
195
+
196
+ def check_consistency_2(piece):
197
+ tets = _find_all_tetrahedra(piece.tet)
198
+
199
+ tets_set = set(tets)
200
+
201
+ to_pieces_map = { }
202
+
203
+ num_pieces = 0
204
+
205
+ for tet in tets:
206
+ for piece in tet.geodesic_pieces:
207
+
208
+ num_pieces += 1
209
+
210
+ if piece.tet is not tet:
211
+ raise Exception("Piece.tet not pointing to tet.")
212
+ if piece.next_.prev is not piece:
213
+ raise Exception("Link list broken.")
214
+ if piece.prev.next_ is not piece:
215
+ raise Exception("Link list broken.")
216
+
217
+ if piece.index != piece.next_.index:
218
+ raise Exception("Index inconsistent.")
219
+
220
+ if piece.index != piece.prev.index:
221
+ raise Exception("Index inconsistent.")
222
+
223
+ if piece.index not in to_pieces_map:
224
+ l = flatten_link_list(piece)
225
+ for i, p in enumerate(l):
226
+ if p is piece:
227
+ l == l[i:] + l[:i]
228
+ break
229
+ else:
230
+ for i, p in enumerate(l):
231
+ if p.endpoints[0].subsimplex == simplex.T:
232
+ l == l[i:] + l[:i]
233
+ break
234
+
235
+ to_pieces_map[piece.index] = l
236
+
237
+ if False:
238
+ for i, pieces in sorted(to_pieces_map.items()):
239
+ print("Component %d (length %d):" % (i, len(pieces)))
240
+ output_linked(pieces[0], tets_set)
241
+
242
+ print("Total length: %d" % num_pieces)
@@ -0,0 +1,6 @@
1
+ def compute_epsilon(RF):
2
+ return RF(0.5) ** (RF.prec() // 2)
3
+
4
+
5
+ def compute_tube_injectivity_radius_epsilon(RF):
6
+ return RF(0.5) ** (RF.prec() // 2 - 8)
@@ -0,0 +1,55 @@
1
+ class DrillGeodesicError(RuntimeError):
2
+ pass
3
+
4
+ class GeodesicSystemNotSimpleError(DrillGeodesicError):
5
+ def __init__(self, maximal_tube_radius):
6
+ self.maximal_tube_radius = maximal_tube_radius
7
+ super().__init__(
8
+ "One of the given geodesics might not simple or two of the "
9
+ "given geodesics might intersect. "
10
+ "The maximal tube radius about the given system of geodesics "
11
+ "was estimated to be: %r." % maximal_tube_radius)
12
+
13
+ class GeodesicMultipleOfCoreCurve(DrillGeodesicError):
14
+ def __init__(self, word, multiplicity):
15
+ self.word = word
16
+ self.multiplicity = multiplicity
17
+ super().__init__(
18
+ "The geodesic %s is a %d-fold multiple of a core curve." % (
19
+ word, multiplicity))
20
+
21
+ class UnfinishedTraceGeodesicError(DrillGeodesicError):
22
+ def __init__(self, steps):
23
+ self.steps = steps
24
+ super().__init__(
25
+ "The geodesic seems to have more than %d pieces in the "
26
+ "triangulation. This is probably due to a pathology, "
27
+ "e.g., the geodesic is very close to a core curve of "
28
+ "filled cusp." % steps)
29
+
30
+ class GeodesicHittingOneSkeletonError(DrillGeodesicError):
31
+ """
32
+ Base class for exceptions caused by the geodesic hitting the
33
+ 1-skeleton and that can be avoided by perturbing the geodesic.
34
+ """
35
+
36
+
37
+ class GeodesicStartPointOnTwoSkeletonError(GeodesicHittingOneSkeletonError):
38
+ """
39
+ Raised when the start point given to GeodesicStartPointInfo appears not to be in the
40
+ interior of a tetrahedron.
41
+ """
42
+
43
+
44
+ class RayHittingOneSkeletonError(GeodesicHittingOneSkeletonError):
45
+ """
46
+ Raised when the geodesic appears to intersect the 1-skeleton of the
47
+ original triangulation.
48
+ """
49
+
50
+
51
+ class RetracingRayHittingOneSkeletonError(GeodesicHittingOneSkeletonError):
52
+ """
53
+ Raised when the geodesic appears to intersect the 1-skeleton of the
54
+ subdivided triangulation.
55
+ """