snappy 3.2__cp310-cp310-macosx_10_12_x86_64.whl
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- snappy/snap/t3mlite/vertex.py +42 -0
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- snappy/tiling/canonical_key_dict.py +59 -0
- snappy/tiling/dict_based_set.py +79 -0
- snappy/tiling/floor.py +49 -0
- snappy/tiling/hyperboloid_dict.py +54 -0
- snappy/tiling/iter_utils.py +78 -0
- snappy/tiling/lifted_tetrahedron.py +22 -0
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- snappy/tiling/real_hash_dict.py +164 -0
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- snappy/tiling/triangle.py +33 -0
- snappy/tkterminal.py +920 -0
- snappy/twister/__init__.py +20 -0
- snappy/twister/main.py +646 -0
- snappy/twister/surfaces/S_0_1 +3 -0
- snappy/twister/surfaces/S_0_2 +3 -0
- snappy/twister/surfaces/S_0_4 +7 -0
- snappy/twister/surfaces/S_0_4_Lantern +8 -0
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- snappy/twister/surfaces/heeg_fig8 +9 -0
- snappy/twister/twister_core.cpython-310-darwin.so +0 -0
- snappy/upper_halfspace/__init__.py +146 -0
- snappy/upper_halfspace/ideal_point.py +26 -0
- snappy/verify/__init__.py +13 -0
- snappy/verify/canonical.py +542 -0
- snappy/verify/complex_volume/__init__.py +18 -0
- snappy/verify/complex_volume/adjust_torsion.py +86 -0
- snappy/verify/complex_volume/closed.py +168 -0
- snappy/verify/complex_volume/compute_ptolemys.py +90 -0
- snappy/verify/complex_volume/cusped.py +56 -0
- snappy/verify/complex_volume/extended_bloch.py +201 -0
- snappy/verify/cusp_translations.py +85 -0
- snappy/verify/edge_equations.py +80 -0
- snappy/verify/exceptions.py +254 -0
- snappy/verify/hyperbolicity.py +224 -0
- snappy/verify/interval_newton_shapes_engine.py +523 -0
- snappy/verify/interval_tree.py +400 -0
- snappy/verify/krawczyk_shapes_engine.py +518 -0
- snappy/verify/maximal_cusp_area_matrix/__init__.py +46 -0
- snappy/verify/maximal_cusp_area_matrix/cusp_tiling_engine.py +419 -0
- snappy/verify/maximal_cusp_area_matrix/cusp_translate_engine.py +153 -0
- snappy/verify/real_algebra.py +286 -0
- snappy/verify/shapes.py +25 -0
- snappy/verify/short_slopes.py +200 -0
- snappy/verify/square_extensions.py +1005 -0
- snappy/verify/test.py +78 -0
- snappy/verify/upper_halfspace/__init__.py +9 -0
- snappy/verify/upper_halfspace/extended_matrix.py +100 -0
- snappy/verify/upper_halfspace/finite_point.py +283 -0
- snappy/verify/upper_halfspace/ideal_point.py +426 -0
- snappy/verify/volume.py +128 -0
- snappy/version.py +2 -0
- snappy-3.2.dist-info/METADATA +58 -0
- snappy-3.2.dist-info/RECORD +503 -0
- snappy-3.2.dist-info/WHEEL +5 -0
- snappy-3.2.dist-info/entry_points.txt +2 -0
- snappy-3.2.dist-info/top_level.txt +28 -0
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from .polynomial import Polynomial
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from .ptolemyVarietyPrimeIdealGroebnerBasis import PtolemyVarietyPrimeIdealGroebnerBasis
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from . import processFileBase
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from . import utilities
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import snappy
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import re
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import sys
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import tempfile
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import subprocess
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import shutil
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###############################################################################
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# functions
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def decomposition_from_magma(text):
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py_eval = processFileBase.get_py_eval(text)
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manifold_thunk = processFileBase.get_manifold_thunk(text)
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untyped_decomposition = processFileBase.find_section(
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text, "IDEAL=DECOMPOSITION")
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primary_decomposition = processFileBase.find_section(
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text, "PRIMARY=DECOMPOSITION")
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radical_decomposition = processFileBase.find_section(
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text, "RADICAL=DECOMPOSITION")
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if untyped_decomposition:
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decomposition = untyped_decomposition[0]
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elif primary_decomposition:
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decomposition = primary_decomposition[0]
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elif radical_decomposition:
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decomposition = radical_decomposition[0]
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else:
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raise ValueError(
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"File not recognized as magma output "
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"(missing primary decomposition or radical decomposition)")
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# Remove "\" at the wrapped lines
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decomposition = utilities.join_long_lines_deleting_whitespace(
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decomposition)
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# Remove outer square brackets
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decomposition = processFileBase.remove_outer_square_brackets(decomposition)
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decomposition_comps = [ c.strip() for c in decomposition.split(']') ]
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decomposition_components = [ c + ']' for c in decomposition_comps if c ]
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free_variables_section = processFileBase.find_section(
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text, "FREE=VARIABLES=IN=COMPONENTS")
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if free_variables_section:
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free_variables = eval(free_variables_section[0])
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else:
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free_variables = len(decomposition_components) * [None]
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witnesses_section = processFileBase.find_section(
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text, "WITNESSES=FOR=COMPONENTS")
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if witnesses_section:
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witnesses_sections = processFileBase.find_section(
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witnesses_section[0], "WITNESSES")
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else:
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witnesses_sections = len(decomposition_components) * [""]
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genuses_section = processFileBase.find_section(
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text, "GENUSES=FOR=COMPONENTS")
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if genuses_section:
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genuses_sections = processFileBase.find_section(
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genuses_section[0], "GENUS=FOR=COMPONENT")
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else:
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genuses_sections = len(decomposition_components) * [""]
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def process_match(i, comp, free_vars, witnesses_txt, genus_txt):
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if i != 0:
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if not comp[0] == ',':
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raise ValueError("Parsing decomposition, expected "
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"separating comma.")
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comp = comp[1:].strip()
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if genus_txt.strip():
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genus = int(genus_txt)
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else:
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genus = None
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witnesses_txts = processFileBase.find_section(
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witnesses_txt, "WITNESS")
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witnesses = [
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_parse_ideal_groebner_basis(
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utilities.join_long_lines_deleting_whitespace(t).strip(),
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py_eval, manifold_thunk, free_vars, [], genus)
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for t in witnesses_txts ]
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return _parse_ideal_groebner_basis(comp, py_eval, manifold_thunk,
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free_vars, witnesses, genus)
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return utilities.MethodMappingList(
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[ process_match(i, comp, free_vars, witnesses, genus_txt)
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for i, (comp, free_vars, witnesses, genus_txt)
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in enumerate(zip(decomposition_components,
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free_variables,
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witnesses_sections,
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genuses_sections)) ])
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def _parse_ideal_groebner_basis(text, py_eval, manifold_thunk,
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free_vars, witnesses, genus):
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match = re.match(
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r"Ideal of Polynomial ring of rank.*?\n"
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r"\s*?(Order:\s*?(.*?)|(.*?)\s*?Order)\n"
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r"\s*?Variables:(.*?\n)+"
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r".*?Dimension (\d+).*?\s*([^,]*[Pp]rime)?.*?\n"
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r"(\s*?Size of variety over algebraically closed field: (\d+).*?\n)?"
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r"\s*Groebner basis:\n"
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r"\s*?\[([^\[\]]*)\]$",
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text)
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if not match:
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raise ValueError("Parsing error in component of "
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"decomposition: %s" % text)
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(
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tot_order_str, post_order_str, pre_order_str,
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var_str,
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dimension_str, prime_str,
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variety_str, size_str,
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poly_strs ) = match.groups()
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dimension = int(dimension_str)
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if dimension == 0:
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polys = [ Polynomial.parse_string(p)
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for p in poly_strs.replace('\n',' ').split(',') ]
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else:
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polys = []
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order_str = post_order_str if post_order_str else pre_order_str
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if not order_str:
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raise ValueError("Could not parse order in decomposition")
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if order_str.strip().lower() == 'lexicographical':
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term_order = 'lex'
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else:
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term_order = 'other'
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is_prime = (prime_str is None) or (prime_str.lower() == 'prime')
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return PtolemyVarietyPrimeIdealGroebnerBasis(
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polys=polys,
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term_order=term_order,
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size=processFileBase.parse_int_or_empty(size_str),
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dimension=dimension,
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is_prime=is_prime,
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free_variables=free_vars,
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py_eval=py_eval,
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manifold_thunk=manifold_thunk,
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witnesses=witnesses,
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genus=genus)
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def triangulation_from_magma(text):
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"""
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Reads the output from a magma computation and extracts the manifold for
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which this output contains solutions.
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"""
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return processFileBase.get_manifold(text)
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def triangulation_from_magma_file(filename):
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"""
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Reads the output from a magma computation from the file with the given
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filename and extracts the manifold for which the file contains solutions.
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"""
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return processFileBase.get_manifold_from_file(filename)
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def contains_magma_output(text):
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return ("IDEAL=DECOMPOSITION=BEGINS" in text or
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"PRIMARY=DECOMPOSITION=BEGINS" in text or
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"RADICAL=DECOMPOSITION=BEGINS" in text)
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def solutions_from_magma_file(filename, numerical=False):
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"""
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Obsolete, use processFileDispatch.parse_solutions_from_file instead.
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Reads the output from a magma computation from the file with the given
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filename and returns a list of solutions. Also see solutions_from_magma.
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A non-zero dimensional component of the variety is reported as
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NonZeroDimensionalComponent.
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"""
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return solutions_from_magma(open(filename).read(), numerical)
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def solutions_from_magma(output, numerical=False):
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"""
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Obsolete, use processFileDispatch.parse_solutions instead.
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Assumes the given string is the output of a magma computation, parses
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it and returns a list of solutions.
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A non-zero dimensional component of the variety is reported as
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NonZeroDimensionalComponent.
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"""
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return decomposition_from_magma(output).solutions(
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numerical=numerical)
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def magma_executable():
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for name in ['magma', 'magma.exe']:
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if shutil.which(name):
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return name
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return None
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|
+
|
219
|
+
|
220
|
+
def run_magma(content,
|
221
|
+
filename_base, memory_limit, directory, verbose):
|
222
|
+
"""
|
223
|
+
call magma on the given content and
|
224
|
+
"""
|
225
|
+
|
226
|
+
magma = magma_executable()
|
227
|
+
if magma is None:
|
228
|
+
raise ValueError('Sorry, could not find the Magma executable')
|
229
|
+
|
230
|
+
if directory:
|
231
|
+
resolved_dir = directory
|
232
|
+
if not resolved_dir[-1] == '/':
|
233
|
+
resolved_dir = resolved_dir + '/'
|
234
|
+
else:
|
235
|
+
resolved_dir = tempfile.mkdtemp() + '/'
|
236
|
+
|
237
|
+
in_file = resolved_dir + filename_base + '.magma'
|
238
|
+
out_file = resolved_dir + filename_base + '.magma_out'
|
239
|
+
|
240
|
+
if verbose:
|
241
|
+
print("Writing to file:", in_file)
|
242
|
+
|
243
|
+
open(in_file, 'wb').write(content.encode('ascii'))
|
244
|
+
|
245
|
+
if verbose:
|
246
|
+
print("Magma's output in:", out_file)
|
247
|
+
|
248
|
+
if sys.platform.startswith('win'):
|
249
|
+
cmd = 'echo | %s "%s" > "%s"' % (magma, in_file, out_file)
|
250
|
+
else:
|
251
|
+
cmd = 'ulimit -m %d; echo | %s "%s" > "%s"' % (
|
252
|
+
int(memory_limit / 1024), magma, in_file, out_file)
|
253
|
+
|
254
|
+
if verbose:
|
255
|
+
print("Command:", cmd)
|
256
|
+
print("Starting magma...")
|
257
|
+
|
258
|
+
retcode = subprocess.call(cmd, shell=True)
|
259
|
+
|
260
|
+
result = open(out_file, 'r').read()
|
261
|
+
|
262
|
+
if verbose:
|
263
|
+
print("magma finished.")
|
264
|
+
print("Parsing magma result...")
|
265
|
+
|
266
|
+
return decomposition_from_magma(result)
|
267
|
+
|
268
|
+
###############################################################################
|
269
|
+
# magma test
|
270
|
+
|
271
|
+
|
272
|
+
_magma_output_for_4_1__sl3 = """
|
273
|
+
==TRIANGULATION=BEGINS==
|
274
|
+
% Triangulation
|
275
|
+
4_1
|
276
|
+
geometric_solution 2.02988321
|
277
|
+
oriented_manifold
|
278
|
+
CS_known -0.0000000000000001
|
279
|
+
|
280
|
+
1 0
|
281
|
+
torus 0.000000000000 0.000000000000
|
282
|
+
|
283
|
+
2
|
284
|
+
1 1 1 1
|
285
|
+
0132 1302 1023 2031
|
286
|
+
0 0 0 0
|
287
|
+
0 0 0 0 0 0 1 -1 0 0 0 0 0 0 0 0
|
288
|
+
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
|
289
|
+
0 1 0 -1 -1 0 2 -1 0 -1 0 1 0 1 -1 0
|
290
|
+
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
|
291
|
+
0.500000000000 0.866025403784
|
292
|
+
|
293
|
+
0 0 0 0
|
294
|
+
0132 1302 1023 2031
|
295
|
+
0 0 0 0
|
296
|
+
0 1 -1 0 0 0 0 0 0 0 0 0 0 0 0 0
|
297
|
+
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
|
298
|
+
0 1 -2 1 1 0 0 -1 0 1 0 -1 0 -1 1 0
|
299
|
+
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
|
300
|
+
0.500000000000 0.866025403784
|
301
|
+
|
302
|
+
|
303
|
+
==TRIANGULATION=ENDS==
|
304
|
+
PY=EVAL=SECTION=BEGINS=HERE
|
305
|
+
{'variable_dict' :
|
306
|
+
(lambda d, negation = (lambda x:-x): {
|
307
|
+
'c_1020_0' : d['c_0012_1'],
|
308
|
+
'c_1020_1' : d['1'],
|
309
|
+
'c_0201_0' : d['c_0201_0'],
|
310
|
+
'c_0201_1' : d['c_0201_0'],
|
311
|
+
'c_2100_0' : d['1'],
|
312
|
+
'c_2100_1' : d['c_0012_1'],
|
313
|
+
'c_2010_0' : d['1'],
|
314
|
+
'c_2010_1' : d['c_0012_1'],
|
315
|
+
'c_0102_0' : d['c_0102_0'],
|
316
|
+
'c_0102_1' : d['c_0102_0'],
|
317
|
+
'c_1101_0' : d['c_1101_0'],
|
318
|
+
'c_1101_1' : negation(d['c_1101_0']),
|
319
|
+
'c_1200_0' : d['c_0012_1'],
|
320
|
+
'c_1200_1' : d['1'],
|
321
|
+
'c_1110_0' : negation(d['c_1011_1']),
|
322
|
+
'c_1110_1' : negation(d['c_1011_0']),
|
323
|
+
'c_0120_0' : d['c_0102_0'],
|
324
|
+
'c_0120_1' : d['c_0102_0'],
|
325
|
+
'c_2001_0' : d['c_0201_0'],
|
326
|
+
'c_2001_1' : d['c_0201_0'],
|
327
|
+
'c_0012_0' : d['1'],
|
328
|
+
'c_0012_1' : d['c_0012_1'],
|
329
|
+
'c_0111_0' : d['1'],
|
330
|
+
'c_0111_1' : negation(d['1']),
|
331
|
+
'c_0210_0' : d['c_0201_0'],
|
332
|
+
'c_0210_1' : d['c_0201_0'],
|
333
|
+
'c_1002_0' : d['c_0102_0'],
|
334
|
+
'c_1002_1' : d['c_0102_0'],
|
335
|
+
'c_1011_0' : d['c_1011_0'],
|
336
|
+
'c_1011_1' : d['c_1011_1'],
|
337
|
+
'c_0021_0' : d['c_0012_1'],
|
338
|
+
'c_0021_1' : d['1']})}
|
339
|
+
PY=EVAL=SECTION=ENDS=HERE
|
340
|
+
PRIMARY=DECOMPOSITION=BEGINS=HERE
|
341
|
+
[
|
342
|
+
Ideal of Polynomial ring of rank 7 over Rational Field
|
343
|
+
Lexicographical Order
|
344
|
+
Variables: t, c_0012_1, c_0102_0, c_0201_0, c_1011_0, c_1011_1, c_1101_0
|
345
|
+
Dimension 0, Radical, Prime
|
346
|
+
Size of variety over algebraically closed field: 2
|
347
|
+
Groebner basis:
|
348
|
+
[
|
349
|
+
t - 3/8*c_1011_1 - 1/2,
|
350
|
+
c_0012_1 + 1/2*c_1011_1 + 3/2,
|
351
|
+
c_0102_0 + 1/2*c_1011_1 + 1/2,
|
352
|
+
c_0201_0 + 1/2*c_1011_1 + 1/2,
|
353
|
+
c_1011_0 - c_1011_1 - 3,
|
354
|
+
c_1011_1^2 + 3*c_1011_1 + 4,
|
355
|
+
c_1101_0 - 1
|
356
|
+
],
|
357
|
+
Ideal of Polynomial ring of rank 7 over Rational Field
|
358
|
+
Lexicographical Order
|
359
|
+
Variables: t, c_0012_1, c_0102_0, c_0201_0, c_1011_0, c_1011_1, c_1101_0
|
360
|
+
Dimension 0, Radical, Prime
|
361
|
+
Size of variety over algebraically closed field: 2
|
362
|
+
Groebner basis:
|
363
|
+
[
|
364
|
+
t - 1/2*c_1101_0 - 15/8,
|
365
|
+
c_0012_1 - 1,
|
366
|
+
c_0102_0 + 4/3*c_1101_0 - 2/3,
|
367
|
+
c_0201_0 - 4/3*c_1101_0 - 1/3,
|
368
|
+
c_1011_0 - 1/3*c_1101_0 - 1/3,
|
369
|
+
c_1011_1 + 1/3*c_1101_0 + 1/3,
|
370
|
+
c_1101_0^2 - 1/4*c_1101_0 + 1
|
371
|
+
],
|
372
|
+
Ideal of Polynomial ring of rank 7 over Rational Field
|
373
|
+
Lexicographical Order
|
374
|
+
Variables: t, c_0012_1, c_0102_0, c_0201_0, c_1011_0, c_1011_1, c_1101_0
|
375
|
+
Dimension 0, Radical, Prime
|
376
|
+
Size of variety over algebraically closed field: 2
|
377
|
+
Groebner basis:
|
378
|
+
[
|
379
|
+
t - c_1011_1 - 1,
|
380
|
+
c_0012_1 - 1,
|
381
|
+
c_0102_0 - c_1011_1,
|
382
|
+
c_0201_0 - c_1011_1,
|
383
|
+
c_1011_0 + c_1011_1,
|
384
|
+
c_1011_1^2 + c_1011_1 + 1,
|
385
|
+
c_1101_0 - 1
|
386
|
+
]
|
387
|
+
]
|
388
|
+
PRIMARY=DECOMPOSITION=ENDS=HERE
|
389
|
+
CPUTIME : 0.020
|
390
|
+
|
391
|
+
Total time: 0.419 seconds, Total memory usage: 5.62MB
|
392
|
+
"""
|
@@ -0,0 +1,150 @@
|
|
1
|
+
import re
|
2
|
+
|
3
|
+
from .utilities import MethodMappingList
|
4
|
+
from .component import NonZeroDimensionalComponent
|
5
|
+
from .coordinates import PtolemyCoordinates
|
6
|
+
from .rur import RUR
|
7
|
+
from . import processFileBase
|
8
|
+
from ..pari import pari
|
9
|
+
|
10
|
+
|
11
|
+
def contains_rur(text):
|
12
|
+
return 'RUR=DECOMPOSITION=BEGINS' in text
|
13
|
+
|
14
|
+
|
15
|
+
def decomposition_from_rur(text):
|
16
|
+
|
17
|
+
py_eval = processFileBase.get_py_eval(text)
|
18
|
+
manifold_thunk = processFileBase.get_manifold_thunk(text)
|
19
|
+
|
20
|
+
rursection = processFileBase.find_unique_section(text, "RUR=DECOMPOSITION")
|
21
|
+
|
22
|
+
rurs = processFileBase.find_section(rursection, "COMPONENT")
|
23
|
+
|
24
|
+
result = MethodMappingList(
|
25
|
+
[ SolutionContainer(
|
26
|
+
_process_rur_component(rur, py_eval, manifold_thunk))
|
27
|
+
for rur in rurs ])
|
28
|
+
|
29
|
+
return result
|
30
|
+
|
31
|
+
|
32
|
+
def _process_rur_component(text, py_eval, manifold_thunk):
|
33
|
+
lines = text.split('\n')
|
34
|
+
|
35
|
+
dimension = None
|
36
|
+
is_prime = False
|
37
|
+
format = None
|
38
|
+
|
39
|
+
body = ""
|
40
|
+
for line in lines:
|
41
|
+
m = re.match(r'==(.*):(.*)', line)
|
42
|
+
if m:
|
43
|
+
key, val = m.groups()
|
44
|
+
val = val.strip()
|
45
|
+
if key == "DIMENSION":
|
46
|
+
dimension = int(val)
|
47
|
+
elif key == "IS_PRIME":
|
48
|
+
if val == "TRUE":
|
49
|
+
is_prime = True
|
50
|
+
elif val != "FALSE":
|
51
|
+
raise Exception("IS_PRIME needs to be TRUE or FALSE")
|
52
|
+
elif key == "FORMAT":
|
53
|
+
format = val
|
54
|
+
else:
|
55
|
+
raise Exception("Unrecognized key %s" % key)
|
56
|
+
else:
|
57
|
+
body += line + "\n"
|
58
|
+
|
59
|
+
if dimension is None:
|
60
|
+
return NonZeroDimensionalComponent()
|
61
|
+
if dimension > 0:
|
62
|
+
return NonZeroDimensionalComponent(dimension=dimension)
|
63
|
+
|
64
|
+
if format is None:
|
65
|
+
raise Exception("No format specified")
|
66
|
+
|
67
|
+
if format == "MAPLE-LIKE":
|
68
|
+
d = parse_maple_like_rur(body.strip())
|
69
|
+
return PtolemyCoordinates(d, is_numerical=False,
|
70
|
+
py_eval_section=py_eval,
|
71
|
+
manifold_thunk=manifold_thunk)
|
72
|
+
else:
|
73
|
+
raise Exception("Unknown format %s" % format)
|
74
|
+
|
75
|
+
|
76
|
+
def parse_maple_like_rur(text):
|
77
|
+
|
78
|
+
m = re.match(r"(.*?)\s*=\s*0\s*,\s*\{(.*?)\}", text, re.DOTALL)
|
79
|
+
|
80
|
+
if not m:
|
81
|
+
raise Exception("Format not detected")
|
82
|
+
|
83
|
+
poly_text, assignments_text = m.groups()
|
84
|
+
var = _find_var_of_poly(poly_text)
|
85
|
+
|
86
|
+
poly = pari(poly_text.replace(var, 'x'))
|
87
|
+
assignments_text = assignments_text.replace(var, 'x')
|
88
|
+
|
89
|
+
return dict([_parse_assignment(assignment, poly)
|
90
|
+
for assignment in assignments_text.split(',')])
|
91
|
+
|
92
|
+
|
93
|
+
def parse_rs_rur(text, variables):
|
94
|
+
|
95
|
+
m = re.match(r'\[([^,\]]+),\s*([^,\]]+),\s*\[([^\]]+)\]\s*,\s*\[\s*\]\s*\]',
|
96
|
+
text, re.DOTALL)
|
97
|
+
|
98
|
+
if not m:
|
99
|
+
raise Exception("Format not detected")
|
100
|
+
|
101
|
+
extension_str, denominator_str, numerators_str = m.groups()
|
102
|
+
|
103
|
+
var = _find_var_of_poly(extension_str)
|
104
|
+
|
105
|
+
extension = pari(extension_str.replace(var, 'x'))
|
106
|
+
denominator = pari(denominator_str.replace(var, 'x'))
|
107
|
+
numerators = [ pari(numerator_str.replace(var, 'x'))
|
108
|
+
for numerator_str in numerators_str.split(',') ]
|
109
|
+
|
110
|
+
fracs = [
|
111
|
+
RUR( [ ( numerator.Mod(extension), 1),
|
112
|
+
(denominator.Mod(extension), -1) ] )
|
113
|
+
for numerator in numerators ]
|
114
|
+
|
115
|
+
return dict(list(zip(variables, fracs)) + [('1', RUR.from_int(1))])
|
116
|
+
|
117
|
+
|
118
|
+
def _find_var_of_poly(text):
|
119
|
+
return re.search(r'[_A-Za-z][_A-Za-z0-9]*',text).group(0)
|
120
|
+
|
121
|
+
|
122
|
+
def _parse_assignment(text, poly):
|
123
|
+
var, expression = re.match(r'\s*([_A-Za-z][_A-Za-z0-9]*)\s*=\s*(.*)$',
|
124
|
+
text).groups()
|
125
|
+
|
126
|
+
return (
|
127
|
+
var,
|
128
|
+
RUR.from_pari_fraction_and_number_field(pari(expression), poly))
|
129
|
+
|
130
|
+
|
131
|
+
_test_case = """
|
132
|
+
_Z^6-3*_Z^5+3*_Z^4-2*_Z^3+_Z-1 = 0,
|
133
|
+
{c_0012_0 = 1, c_0012_2 = _Z^5-3*_Z^4+3*_Z^3-_Z^2-2*_Z+1, c_0111_2 = -_Z*(_Z^4-2*_Z^3+_Z-1), c_1011_0 = -_Z^2*(-1+_Z), c_1101_0 = -_Z*(-1+_Z), c_1101_1 = _Z*(-1+_Z), c_1110_0 = _Z, a = (_Z^3+_Z^2)/(_Z^3+34*_Z^2+3)}
|
134
|
+
"""
|
135
|
+
|
136
|
+
|
137
|
+
class SolutionContainer():
|
138
|
+
def __init__(self, solutions):
|
139
|
+
self._solutions = solutions
|
140
|
+
|
141
|
+
def solutions(self, numerical=False):
|
142
|
+
if numerical:
|
143
|
+
return self._solutions.numerical()
|
144
|
+
else:
|
145
|
+
return self._solutions
|
146
|
+
|
147
|
+
def number_field(self):
|
148
|
+
return self._solutions.number_field()
|
149
|
+
|
150
|
+
# print parse_maple_like_rur(_test_case)
|
@@ -0,0 +1,102 @@
|
|
1
|
+
from . import matrix
|
2
|
+
from .polynomial import Polynomial
|
3
|
+
from ..pari import pari
|
4
|
+
|
5
|
+
|
6
|
+
class PtolemyGeneralizedObstructionClass():
|
7
|
+
"""
|
8
|
+
Represents an obstruction cocycle of a PSL(n,C) representation in
|
9
|
+
H^2(M,partial M;Z/n).
|
10
|
+
|
11
|
+
>>> from snappy import Manifold
|
12
|
+
>>> M = Manifold("m004")
|
13
|
+
|
14
|
+
Create an obstruction class, this has to be in the kernel of d^2:
|
15
|
+
|
16
|
+
>>> c = PtolemyGeneralizedObstructionClass([2,0,0,1])
|
17
|
+
|
18
|
+
For better accounting, give it an index:
|
19
|
+
|
20
|
+
>>> c = PtolemyGeneralizedObstructionClass([2,0,0,1], index = 1)
|
21
|
+
|
22
|
+
Get corresponding ptolemy variety:
|
23
|
+
|
24
|
+
>>> p = M.ptolemy_variety(N=3, obstruction_class=c)
|
25
|
+
|
26
|
+
Canonical filename base:
|
27
|
+
|
28
|
+
>>> p.filename_base()
|
29
|
+
'm004__sl3_c1'
|
30
|
+
|
31
|
+
Now pick something not in the kernel:
|
32
|
+
|
33
|
+
>>> c = PtolemyGeneralizedObstructionClass([1,0,0,1])
|
34
|
+
>>> p = M.ptolemy_variety(N=3, obstruction_class=c)
|
35
|
+
Traceback (most recent call last):
|
36
|
+
...
|
37
|
+
AssertionError: PtolemyGeneralizedObstructionClass not in kernel of d2
|
38
|
+
|
39
|
+
"""
|
40
|
+
|
41
|
+
def __init__(self, H2_class, index=None, N=None, manifold=None):
|
42
|
+
|
43
|
+
self.H2_class = H2_class
|
44
|
+
self._index = index
|
45
|
+
self._N = N
|
46
|
+
self._manifold = manifold
|
47
|
+
|
48
|
+
def _checkManifoldAndN(self, manifold, N):
|
49
|
+
if self._manifold is not None:
|
50
|
+
assert manifold == self._manifold, (
|
51
|
+
"PtolemyGeneralizedObstructionClass for wrong manifold")
|
52
|
+
|
53
|
+
if self._N is not None:
|
54
|
+
assert N == self._N, (
|
55
|
+
"PtolemyGeneralizedObstructionClass for wrong N")
|
56
|
+
|
57
|
+
assert len(self.H2_class) == 2 * manifold.num_tetrahedra(), (
|
58
|
+
"PtolemyGeneralizedObstructionClass does not match number of "
|
59
|
+
"face classes")
|
60
|
+
|
61
|
+
# compute boundary maps for cellular chain complex
|
62
|
+
chain_d3, dummy_rows, dummy_columns = (
|
63
|
+
manifold._ptolemy_equations_boundary_map_3())
|
64
|
+
|
65
|
+
# transpose to compute cohomology
|
66
|
+
cochain_d2 = matrix.matrix_transpose(chain_d3)
|
67
|
+
|
68
|
+
assert matrix.is_vector_zero(
|
69
|
+
matrix.vector_modulo(
|
70
|
+
matrix.matrix_mult_vector(cochain_d2, self.H2_class),
|
71
|
+
N)), ("PtolemyGeneralizedObstructionClass not in kernel of "
|
72
|
+
"d2")
|
73
|
+
|
74
|
+
def _is_non_trivial(self, N):
|
75
|
+
for h in self.H2_class:
|
76
|
+
if h % N != 0:
|
77
|
+
return True
|
78
|
+
return False
|
79
|
+
|
80
|
+
def _get_equation_for_u(self, N):
|
81
|
+
|
82
|
+
# the information about the root of unity u we use:
|
83
|
+
# returns order_of_u, identified_variables, equations
|
84
|
+
|
85
|
+
if self._is_non_trivial(N):
|
86
|
+
|
87
|
+
# If we have a non-trivial obstruction class
|
88
|
+
|
89
|
+
if N == 2:
|
90
|
+
# For N == 2, we set u to -1, no extra equations necessary
|
91
|
+
return 2, []
|
92
|
+
|
93
|
+
else:
|
94
|
+
# Return the cyclotomic polynomial as extra equation in u
|
95
|
+
cyclo = Polynomial.parse_string(str(pari.polcyclo(N, 'u')))
|
96
|
+
return N, [cyclo]
|
97
|
+
else:
|
98
|
+
# If we have the trivial cohomology class, no u returned
|
99
|
+
return 1, []
|
100
|
+
|
101
|
+
def __repr__(self):
|
102
|
+
return "PtolemyGeneralizedObstructionClass(%s)" % self.H2_class
|
@@ -0,0 +1,64 @@
|
|
1
|
+
class PtolemyObstructionClass():
|
2
|
+
"""
|
3
|
+
Represents an obstruction cocycle of a pSL(n,C) representation as
|
4
|
+
described in Definition 1.7 of
|
5
|
+
|
6
|
+
Garoufalidis, Thurston, Zickert
|
7
|
+
The Complex Volume of SL(n,C)-Representations of 3-Manifolds
|
8
|
+
https://arxiv.org/abs/1111.2828
|
9
|
+
|
10
|
+
To generate such an obstruction class, call:
|
11
|
+
|
12
|
+
>>> from snappy import Manifold
|
13
|
+
>>> M = Manifold("4_1")
|
14
|
+
>>> cs = M.ptolemy_obstruction_classes()
|
15
|
+
|
16
|
+
Print out the values:
|
17
|
+
|
18
|
+
>>> for c in cs: print(c)
|
19
|
+
PtolemyObstructionClass(s_0_0 - 1, s_1_0 - 1, s_2_0 - 1, s_3_0 - 1, s_0_0 - s_0_1, s_1_0 - s_3_1, s_2_0 - s_2_1, s_3_0 - s_1_1)
|
20
|
+
PtolemyObstructionClass(s_0_0 + 1, s_1_0 - 1, s_2_0 - 1, s_3_0 + 1, s_0_0 - s_0_1, s_1_0 - s_3_1, s_2_0 - s_2_1, s_3_0 - s_1_1)
|
21
|
+
"""
|
22
|
+
|
23
|
+
def __init__(self, manifold, index, H2_element, explain_basis,
|
24
|
+
identified_face_classes):
|
25
|
+
|
26
|
+
self._manifold = manifold
|
27
|
+
self._index = index
|
28
|
+
self._H2_element = H2_element
|
29
|
+
self._explain_basis = explain_basis
|
30
|
+
self._identified_face_classes = identified_face_classes
|
31
|
+
|
32
|
+
def H2_element_entry_to_identified_variable(entry, variable):
|
33
|
+
return ((-1)**entry, 0, variable, 1)
|
34
|
+
|
35
|
+
self.identified_variables = (
|
36
|
+
[H2_element_entry_to_identified_variable(entry, variable)
|
37
|
+
for entry, variable in zip(H2_element, explain_basis)] +
|
38
|
+
[(+1, 0, var1, var2)
|
39
|
+
for sign, power, var1, var2 in self._identified_face_classes])
|
40
|
+
|
41
|
+
def _checkManifoldAndN(self, manifold, N):
|
42
|
+
if self._manifold is not None:
|
43
|
+
assert manifold == self._manifold, (
|
44
|
+
"PtolemyObstructionClass for wrong manifold")
|
45
|
+
|
46
|
+
assert N % 2 == 0, (
|
47
|
+
"PtolemyObstructionClass only makes sense for even N, "
|
48
|
+
"try PtolemyGeneralizedObstructionClass")
|
49
|
+
|
50
|
+
def __repr__(self):
|
51
|
+
|
52
|
+
def to_string(i):
|
53
|
+
sign, power, var1, var2 = i
|
54
|
+
var2 = str(var2)
|
55
|
+
|
56
|
+
assert sign in [+1, -1]
|
57
|
+
|
58
|
+
if sign == +1:
|
59
|
+
return var1 + " - " + var2
|
60
|
+
else:
|
61
|
+
return var1 + " + " + var2
|
62
|
+
|
63
|
+
return "PtolemyObstructionClass(%s)" % ', '.join(
|
64
|
+
to_string(i) for i in self.identified_variables)
|