snappy 3.2__cp310-cp310-macosx_10_12_x86_64.whl

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  1. snappy/CyOpenGL.cpython-310-darwin.so +0 -0
  2. snappy/SnapPy.cpython-310-darwin.so +0 -0
  3. snappy/SnapPy.ico +0 -0
  4. snappy/SnapPy.png +0 -0
  5. snappy/SnapPyHP.cpython-310-darwin.so +0 -0
  6. snappy/__init__.py +760 -0
  7. snappy/app.py +605 -0
  8. snappy/app_menus.py +372 -0
  9. snappy/browser.py +998 -0
  10. snappy/cache.py +25 -0
  11. snappy/canonical.py +249 -0
  12. snappy/cusps/__init__.py +38 -0
  13. snappy/cusps/cusp_area_matrix.py +101 -0
  14. snappy/cusps/cusp_areas_from_matrix.py +173 -0
  15. snappy/cusps/maximal_cusp_area_matrix.py +136 -0
  16. snappy/cusps/test.py +21 -0
  17. snappy/cusps/trig_cusp_area_matrix.py +63 -0
  18. snappy/database.py +454 -0
  19. snappy/db_utilities.py +79 -0
  20. snappy/decorated_isosig.py +710 -0
  21. snappy/dev/__init__.py +0 -0
  22. snappy/dev/extended_ptolemy/__init__.py +8 -0
  23. snappy/dev/extended_ptolemy/closed.py +106 -0
  24. snappy/dev/extended_ptolemy/complexVolumesClosed.py +149 -0
  25. snappy/dev/extended_ptolemy/direct.py +42 -0
  26. snappy/dev/extended_ptolemy/extended.py +406 -0
  27. snappy/dev/extended_ptolemy/giac_helper.py +43 -0
  28. snappy/dev/extended_ptolemy/giac_rur.py +129 -0
  29. snappy/dev/extended_ptolemy/gluing.py +46 -0
  30. snappy/dev/extended_ptolemy/phc_wrapper.py +220 -0
  31. snappy/dev/extended_ptolemy/printMatrices.py +70 -0
  32. snappy/dev/vericlosed/__init__.py +1 -0
  33. snappy/dev/vericlosed/computeApproxHyperbolicStructureNew.py +159 -0
  34. snappy/dev/vericlosed/computeApproxHyperbolicStructureOrb.py +90 -0
  35. snappy/dev/vericlosed/computeVerifiedHyperbolicStructure.py +111 -0
  36. snappy/dev/vericlosed/gimbalLoopFinder.py +130 -0
  37. snappy/dev/vericlosed/hyperbolicStructure.py +313 -0
  38. snappy/dev/vericlosed/krawczykCertifiedEdgeLengthsEngine.py +165 -0
  39. snappy/dev/vericlosed/oneVertexTruncatedComplex.py +122 -0
  40. snappy/dev/vericlosed/orb/__init__.py +1 -0
  41. snappy/dev/vericlosed/orb/orb_solution_for_snappea_finite_triangulation_mac +0 -0
  42. snappy/dev/vericlosed/parseVertexGramMatrixFile.py +47 -0
  43. snappy/dev/vericlosed/polishApproxHyperbolicStructure.py +61 -0
  44. snappy/dev/vericlosed/test.py +54 -0
  45. snappy/dev/vericlosed/truncatedComplex.py +176 -0
  46. snappy/dev/vericlosed/verificationError.py +58 -0
  47. snappy/dev/vericlosed/verifyHyperbolicStructureEngine.py +177 -0
  48. snappy/doc/_images/SnapPy-196.png +0 -0
  49. snappy/doc/_images/geodesics.jpg +0 -0
  50. snappy/doc/_images/m004_paper_plane_on_systole.jpg +0 -0
  51. snappy/doc/_images/m125_paper_plane.jpg +0 -0
  52. snappy/doc/_images/mac.png +0 -0
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  56. snappy/doc/_images/ubuntu.png +0 -0
  57. snappy/doc/_images/win7.png +0 -0
  58. snappy/doc/_sources/additional_classes.rst.txt +40 -0
  59. snappy/doc/_sources/bugs.rst.txt +14 -0
  60. snappy/doc/_sources/censuses.rst.txt +51 -0
  61. snappy/doc/_sources/credits.rst.txt +75 -0
  62. snappy/doc/_sources/development.rst.txt +259 -0
  63. snappy/doc/_sources/index.rst.txt +182 -0
  64. snappy/doc/_sources/installing.rst.txt +247 -0
  65. snappy/doc/_sources/manifold.rst.txt +6 -0
  66. snappy/doc/_sources/manifoldhp.rst.txt +46 -0
  67. snappy/doc/_sources/news.rst.txt +355 -0
  68. snappy/doc/_sources/other.rst.txt +25 -0
  69. snappy/doc/_sources/platonic_census.rst.txt +20 -0
  70. snappy/doc/_sources/plink.rst.txt +102 -0
  71. snappy/doc/_sources/ptolemy.rst.txt +66 -0
  72. snappy/doc/_sources/ptolemy_classes.rst.txt +42 -0
  73. snappy/doc/_sources/ptolemy_examples1.rst.txt +298 -0
  74. snappy/doc/_sources/ptolemy_examples2.rst.txt +363 -0
  75. snappy/doc/_sources/ptolemy_examples3.rst.txt +301 -0
  76. snappy/doc/_sources/ptolemy_examples4.rst.txt +61 -0
  77. snappy/doc/_sources/ptolemy_prelim.rst.txt +105 -0
  78. snappy/doc/_sources/screenshots.rst.txt +21 -0
  79. snappy/doc/_sources/snap.rst.txt +87 -0
  80. snappy/doc/_sources/snappy.rst.txt +28 -0
  81. snappy/doc/_sources/spherogram.rst.txt +103 -0
  82. snappy/doc/_sources/todo.rst.txt +47 -0
  83. snappy/doc/_sources/triangulation.rst.txt +11 -0
  84. snappy/doc/_sources/tutorial.rst.txt +49 -0
  85. snappy/doc/_sources/verify.rst.txt +210 -0
  86. snappy/doc/_sources/verify_internals.rst.txt +79 -0
  87. snappy/doc/_static/SnapPy-horizontal-128.png +0 -0
  88. snappy/doc/_static/SnapPy.ico +0 -0
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  153. snappy/doc/development.html +384 -0
  154. snappy/doc/genindex.html +1331 -0
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  162. snappy/doc/platonic_census.html +375 -0
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  166. snappy/doc/ptolemy_examples1.html +409 -0
  167. snappy/doc/ptolemy_examples2.html +471 -0
  168. snappy/doc/ptolemy_examples3.html +414 -0
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  171. snappy/doc/py-modindex.html +165 -0
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  179. snappy/doc/triangulation.html +1584 -0
  180. snappy/doc/tutorial.html +159 -0
  181. snappy/doc/verify.html +330 -0
  182. snappy/doc/verify_internals.html +1235 -0
  183. snappy/drilling/__init__.py +456 -0
  184. snappy/drilling/barycentric.py +103 -0
  185. snappy/drilling/constants.py +5 -0
  186. snappy/drilling/crush.py +270 -0
  187. snappy/drilling/cusps.py +125 -0
  188. snappy/drilling/debug.py +242 -0
  189. snappy/drilling/epsilons.py +6 -0
  190. snappy/drilling/exceptions.py +55 -0
  191. snappy/drilling/moves.py +620 -0
  192. snappy/drilling/peripheral_curves.py +210 -0
  193. snappy/drilling/perturb.py +188 -0
  194. snappy/drilling/shorten.py +36 -0
  195. snappy/drilling/subdivide.py +274 -0
  196. snappy/drilling/test.py +23 -0
  197. snappy/drilling/test_cases.py +126 -0
  198. snappy/drilling/tracing.py +351 -0
  199. snappy/exceptions.py +26 -0
  200. snappy/export_stl.py +120 -0
  201. snappy/exterior_to_link/__init__.py +2 -0
  202. snappy/exterior_to_link/barycentric_geometry.py +463 -0
  203. snappy/exterior_to_link/exceptions.py +6 -0
  204. snappy/exterior_to_link/geodesic_map.json +14408 -0
  205. snappy/exterior_to_link/hyp_utils.py +112 -0
  206. snappy/exterior_to_link/link_projection.py +323 -0
  207. snappy/exterior_to_link/main.py +197 -0
  208. snappy/exterior_to_link/mcomplex_with_expansion.py +261 -0
  209. snappy/exterior_to_link/mcomplex_with_link.py +687 -0
  210. snappy/exterior_to_link/mcomplex_with_memory.py +162 -0
  211. snappy/exterior_to_link/pl_utils.py +491 -0
  212. snappy/exterior_to_link/put_in_S3.py +156 -0
  213. snappy/exterior_to_link/rational_linear_algebra.py +123 -0
  214. snappy/exterior_to_link/rational_linear_algebra_wrapped.py +135 -0
  215. snappy/exterior_to_link/simplify_to_base_tri.py +114 -0
  216. snappy/exterior_to_link/stored_moves.py +475 -0
  217. snappy/exterior_to_link/test.py +31 -0
  218. snappy/filedialog.py +28 -0
  219. snappy/geometric_structure/__init__.py +212 -0
  220. snappy/geometric_structure/cusp_neighborhood/__init__.py +3 -0
  221. snappy/geometric_structure/cusp_neighborhood/complex_cusp_cross_section.py +697 -0
  222. snappy/geometric_structure/cusp_neighborhood/cusp_cross_section_base.py +484 -0
  223. snappy/geometric_structure/cusp_neighborhood/exceptions.py +42 -0
  224. snappy/geometric_structure/cusp_neighborhood/real_cusp_cross_section.py +298 -0
  225. snappy/geometric_structure/cusp_neighborhood/tiles_for_cusp_neighborhood.py +159 -0
  226. snappy/geometric_structure/cusp_neighborhood/vertices.py +32 -0
  227. snappy/geometric_structure/geodesic/__init__.py +0 -0
  228. snappy/geometric_structure/geodesic/add_core_curves.py +152 -0
  229. snappy/geometric_structure/geodesic/avoid_core_curves.py +369 -0
  230. snappy/geometric_structure/geodesic/canonical_keys.py +52 -0
  231. snappy/geometric_structure/geodesic/check_away_from_core_curve.py +60 -0
  232. snappy/geometric_structure/geodesic/constants.py +6 -0
  233. snappy/geometric_structure/geodesic/exceptions.py +22 -0
  234. snappy/geometric_structure/geodesic/fixed_points.py +93 -0
  235. snappy/geometric_structure/geodesic/geodesic_start_point_info.py +435 -0
  236. snappy/geometric_structure/geodesic/graph_trace_helper.py +67 -0
  237. snappy/geometric_structure/geodesic/line.py +30 -0
  238. snappy/geometric_structure/geodesic/multiplicity.py +127 -0
  239. snappy/geometric_structure/geodesic/tiles_for_geodesic.py +101 -0
  240. snappy/geometric_structure/test.py +22 -0
  241. snappy/gui.py +121 -0
  242. snappy/horoviewer.py +443 -0
  243. snappy/hyperboloid/__init__.py +212 -0
  244. snappy/hyperboloid/distances.py +245 -0
  245. snappy/hyperboloid/horoball.py +19 -0
  246. snappy/hyperboloid/line.py +35 -0
  247. snappy/hyperboloid/point.py +9 -0
  248. snappy/hyperboloid/triangle.py +29 -0
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  250. snappy/infowindow.py +65 -0
  251. snappy/isometry_signature.py +382 -0
  252. snappy/len_spec/__init__.py +596 -0
  253. snappy/len_spec/geodesic_info.py +110 -0
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  255. snappy/len_spec/geodesic_piece.py +143 -0
  256. snappy/len_spec/geometric_structure.py +182 -0
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  262. snappy/len_spec/tile.py +275 -0
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  264. snappy/manifolds/HTWKnots/alternating.gz +0 -0
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  277. snappy/ptolemy/fieldExtensions.py +153 -0
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+ <h1>Tutorial<a class="headerlink" href="#tutorial" title="Link to this heading"></a></h1>
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+ <p>The easiest way to learn to use SnapPy is to watch the screencasts
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+ available on <a class="reference external" href="http://youtube.com/user/NathanDunfield">YouTube</a>:</p>
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+ <ul class="simple">
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+ <li><p>Intro and quickstart: an 11 minute video with the basics: <a class="reference external" href="http://www.youtube.com/watch?v=ezo19L-JTTI">Part I</a> and <a class="reference external" href="http://www.youtube.com/watch?v=Js4qwyIs-Oo">Part II</a>.</p></li>
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+ <li><p>An hour-long demo <a class="reference external" href="http://youtu.be/j8enbAkAvdY">Practical computation with hyperbolic
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+ 3-manifolds</a>, recorded at the Thurston Memorial
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+ Conference.</p></li>
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+ <li><p>The SnapPy 2.0 <a class="reference external" href="http://youtu.be/bCYe_a48viA">new feature demo</a>.</p></li>
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+ <li><p><a class="reference external" href="https://icerm.brown.edu/video_archive/?play=1992">SnapPy, SageMath, and Docker are friends</a> with associated
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+ <a class="reference external" href="https://icerm.brown.edu/materials/Abstracts/tw19-3-pods/Computation_Demonstration_2_]_Nathan_Dunfield,_University_of_Illinois,_Urbana-Champaign.pdf">materials (4 pages), including homework</a>.</p></li>
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+ <li><p><a class="reference external" href="http://dunfield.info/warwick2017/">Notes, problem sheets, and references</a> from the LMS-CMI Research
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+ School in Warwick in 2017.</p></li>
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+ <li><p>Another hour-long demo <a class="reference external" href="https://icerm.brown.edu/video_archive/?play=1856">Practical computations with hyperbolic
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+ 3-manifolds</a>
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+ given at ICERM in 2019.</p></li>
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+ </ul>
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+ <p>The <strong>key</strong> thing to remember when using the SnapPy command shell window is
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+ that you can explore objects using introspection and tab-completion:</p>
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+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span>In [1]: Manifold? &lt;hit return-key&gt;
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+ ...instructions for creating a manifold...
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+ </pre></div>
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+ </div>
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+ <p>So now we create a manifold:</p>
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+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">In</span> <span class="p">[</span><span class="mi">2</span><span class="p">]:</span> <span class="n">M</span> <span class="o">=</span> <span class="n">Manifold</span><span class="p">(</span><span class="s2">&quot;m004&quot;</span><span class="p">)</span>
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+ </pre></div>
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+ </div>
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+ <p>But what can we do with it?</p>
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+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">In</span> <span class="p">[</span><span class="mi">3</span><span class="p">]:</span> <span class="n">M</span><span class="o">.&lt;</span><span class="n">hit</span> <span class="n">tab</span><span class="o">-</span><span class="n">key</span><span class="o">&gt;</span>
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+ <span class="o">...</span><span class="n">list</span> <span class="n">of</span> <span class="n">methods</span><span class="o">...</span>
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+ </pre></div>
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+ </div>
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+ <p>What does the “cover” method do?</p>
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+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span>In [4]: M.cover? &lt;hit return-key&gt;
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+ ...description of cover method..
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+ <hr/>
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+ </div>
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+ <div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
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+ <div itemprop="articleBody">
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+
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+ <section id="verified-computations">
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+ <h1>Verified computations<a class="headerlink" href="#verified-computations" title="Link to this heading"></a></h1>
98
+ <section id="introduction">
99
+ <span id="verify-primer"></span><h2>Introduction<a class="headerlink" href="#introduction" title="Link to this heading"></a></h2>
100
+ <p>Several SnapPy methods use numerical computations with floating point
101
+ approximations and can potentially result in incorrect results. This even
102
+ applies to methods whose output is purely combinatorial such as
103
+ <a class="reference internal" href="manifold.html#snappy.Manifold.canonical_retriangulation" title="snappy.Manifold.canonical_retriangulation"><code class="xref py py-meth docutils literal notranslate"><span class="pre">canonical_retriangulation()</span></code></a>.</p>
104
+ <p>Many of these SnapPy methods can be supplied with a <code class="xref py py-attr docutils literal notranslate"><span class="pre">verified</span></code> flag to
105
+ ensure that the result is provably correct. Note that verified computations are
106
+ only available when using SnapPy inside <a class="reference external" href="http://sagemath.org">SageMath</a>.
107
+ If the flag <code class="xref py py-attr docutils literal notranslate"><span class="pre">verified=True</span></code> is specified, an incorrect result is
108
+ never returned. Instead the method clearly indicates a failure, usually through
109
+ an exception:</p>
110
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">sage</span><span class="p">:</span> <span class="n">M</span><span class="o">=</span><span class="n">Manifold</span><span class="p">(</span><span class="s2">&quot;m004&quot;</span><span class="p">)</span>
111
+ <span class="n">sage</span><span class="p">:</span> <span class="n">M</span><span class="o">.</span><span class="n">drill_word</span><span class="p">(</span><span class="s1">&#39;abc&#39;</span><span class="p">,</span> <span class="n">verified</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">bits_prec</span> <span class="o">=</span> <span class="mi">40</span><span class="p">)</span>
112
+ <span class="o">...</span>
113
+ <span class="n">InsufficientPrecisionError</span><span class="p">:</span> <span class="n">When</span> <span class="n">re</span><span class="o">-</span><span class="n">tracing</span> <span class="n">the</span> <span class="n">geodesic</span><span class="p">,</span> <span class="n">the</span> <span class="n">intersection</span> <span class="k">with</span> <span class="n">the</span> <span class="nb">next</span> <span class="n">tetrahedron</span> <span class="n">face</span> <span class="n">was</span> <span class="n">too</span> <span class="n">close</span> <span class="n">to</span> <span class="n">the</span> <span class="n">previous</span> <span class="n">to</span> <span class="n">tell</span> <span class="n">them</span> <span class="n">apart</span><span class="o">.</span> <span class="n">Increasing</span> <span class="n">the</span> <span class="n">precision</span> <span class="n">will</span> <span class="n">probably</span> <span class="n">avoid</span> <span class="n">this</span> <span class="n">problem</span><span class="o">.</span>
114
+ </pre></div>
115
+ </div>
116
+ <p>Often, such a failure can be advoided by increasing the precision. In
117
+ particular, this applies if the exception is a (subclass of)
118
+ <code class="xref py py-class docutils literal notranslate"><span class="pre">InsufficientPrecisionError</span></code>:</p>
119
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">sage</span><span class="p">:</span> <span class="n">M</span><span class="o">.</span><span class="n">drill_word</span><span class="p">(</span><span class="s1">&#39;abc&#39;</span><span class="p">,</span> <span class="n">verified</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">bits_prec</span> <span class="o">=</span> <span class="mi">60</span><span class="p">)</span>
120
+ <span class="n">m004_drilled</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span><span class="mi">0</span><span class="p">)(</span><span class="mi">0</span><span class="p">,</span><span class="mi">0</span><span class="p">)</span>
121
+ </pre></div>
122
+ </div>
123
+ <p>Note that, <a class="reference internal" href="manifold.html#snappy.Manifold.verify_hyperbolicity" title="snappy.Manifold.verify_hyperbolicity"><code class="xref py py-meth docutils literal notranslate"><span class="pre">verify_hyperbolicity()</span></code></a> is different though
124
+ and does not throw an exception. Instead, it returns a bool indicating success
125
+ as part of its output. This is for compatibility with
126
+ <a class="reference external" href="http://www.oishi.info.waseda.ac.jp/~takayasu/hikmot/">HIKMOT</a>’s
127
+ <code class="docutils literal notranslate"><span class="pre">verify_hyperbolicty</span></code>:</p>
128
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span>sage: M.verify_hyperbolicity(bits_prec=10)
129
+ (False, [])
130
+ sage: M.verify_hyperbolicity()
131
+ (True,
132
+ [0.50000000000000? + 0.86602540378444?*I,
133
+ 0.50000000000000? + 0.86602540378444?*I])
134
+ </pre></div>
135
+ </div>
136
+ <p>As illustrated above, the result consists of intervals
137
+ (of type SageMath’s <code class="docutils literal notranslate"><span class="pre">RealIntervalField</span></code> or
138
+ <code class="docutils literal notranslate"><span class="pre">ComplexIntervalField</span></code>) if the output of a computation is numerical
139
+ and <code class="xref py py-attr docutils literal notranslate"><span class="pre">verified=True</span></code> is specified. These intervals contain the true
140
+ value.</p>
141
+ </section>
142
+ <section id="overview">
143
+ <h2>Overview<a class="headerlink" href="#overview" title="Link to this heading"></a></h2>
144
+ <p>Some examples of verified computations are:</p>
145
+ <ul>
146
+ <li><p>Verify the hyperbolicity
147
+ of an orientable 3-manifold giving complex intervals for the
148
+ shapes corresponding to a hyperbolic structure or holonomy representation with
149
+ <a class="reference internal" href="manifold.html#snappy.Manifold.verify_hyperbolicity" title="snappy.Manifold.verify_hyperbolicity"><code class="xref py py-meth docutils literal notranslate"><span class="pre">verify_hyperbolicity()</span></code></a>:</p>
150
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span>sage: M = Manifold(&quot;m015&quot;)
151
+ sage: M.verify_hyperbolicity()
152
+ (True,
153
+ [0.6623589786224? + 0.5622795120623?*I,
154
+ 0.6623589786224? + 0.5622795120623?*I,
155
+ 0.6623589786224? + 0.5622795120623?*I])
156
+ sage: M.verify_hyperbolicity(holonomy=True)[1].SL2C(&#39;a&#39;)
157
+ [-0.324717957? - 1.124559024?*I -0.704807293? + 0.398888830?*I]
158
+ [ 1.409614585? - 0.797777659?*I -1.000000000? + 0.?e-9*I]
159
+ </pre></div>
160
+ </div>
161
+ </li>
162
+ <li><p>Intervals for the volume and complex volume of a hyperbolic orientable 3-manifold:</p>
163
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span>sage: M = Manifold(&quot;m003(-3,1)&quot;)
164
+ sage: M.volume(verified=True, bits_prec = 100)
165
+ 0.942707362776927720921299603?
166
+ sage: M = Manifold(&quot;m015&quot;)
167
+ sage: M.complex_volume(verified_modulo_2_torsion=True)
168
+ 2.8281220883? + 1.9106738240?*I
169
+ </pre></div>
170
+ </div>
171
+ <p>(Note that when using verified computation, the Chern-Simons invariant is only computed
172
+ modulo pi^2/2 even though it is defined modulo pi^2.)</p>
173
+ </li>
174
+ <li><p>Give the (a close relative to the canonical cell decomposition) of a cusped
175
+ hyperbolic manifold using intervals or exact arithmetic if necessary with
176
+ <a class="reference internal" href="manifold.html#snappy.Manifold.canonical_retriangulation" title="snappy.Manifold.canonical_retriangulation"><code class="xref py py-meth docutils literal notranslate"><span class="pre">canonical_retriangulation()</span></code></a>:</p>
177
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">sage</span><span class="p">:</span> <span class="n">M</span> <span class="o">=</span> <span class="n">Manifold</span><span class="p">(</span><span class="s2">&quot;m412&quot;</span><span class="p">)</span>
178
+ <span class="n">sage</span><span class="p">:</span> <span class="n">K</span> <span class="o">=</span> <span class="n">M</span><span class="o">.</span><span class="n">canonical_retriangulation</span><span class="p">(</span><span class="n">verified</span> <span class="o">=</span> <span class="kc">True</span><span class="p">)</span>
179
+ <span class="n">sage</span><span class="p">:</span> <span class="nb">len</span><span class="p">(</span><span class="n">K</span><span class="o">.</span><span class="n">isomorphisms_to</span><span class="p">(</span><span class="n">K</span><span class="p">))</span> <span class="c1"># Certified size of isometry group</span>
180
+ <span class="mi">8</span>
181
+ </pre></div>
182
+ </div>
183
+ <p><strong>Remark:</strong> For the case of non-tetrahedral canonical cell, exact values
184
+ are used which are found
185
+ using the <a class="reference external" href="http://en.wikipedia.org/wiki/Lenstra%E2%80%93Lenstra%E2%80%93Lov%C3%A1sz_lattice_basis_reduction_algorithm">LLL-algorithm</a>
186
+ and then verified using exact computations. These computations can be slow. A massive speed-up was achieved by
187
+ recent improvements so that the computation of the isometry signature of any manifold in <code class="docutils literal notranslate"><span class="pre">OrientableCuspedCensus</span></code>
188
+ takes at most a couple of seconds, typically, far less. Manifolds with more simplices might require setting
189
+ a higher value for
190
+ <code class="xref py py-attr docutils literal notranslate"><span class="pre">exact_bits_prec_and_degrees</span></code>.</p>
191
+ </li>
192
+ <li><p>The isometry signature which is a complete invariant of the isometry type
193
+ of a cusped hyperbolic manifold (i.e., two manifolds are isometric if and only
194
+ if they have the same isometry signature):</p>
195
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">sage</span><span class="p">:</span> <span class="n">M</span> <span class="o">=</span> <span class="n">Manifold</span><span class="p">(</span><span class="s2">&quot;m412&quot;</span><span class="p">)</span>
196
+ <span class="n">sage</span><span class="p">:</span> <span class="n">M</span><span class="o">.</span><span class="n">isometry_signature</span><span class="p">(</span><span class="n">verified</span> <span class="o">=</span> <span class="kc">True</span><span class="p">)</span>
197
+ <span class="s1">&#39;mvvLALQQQhfghjjlilkjklaaaaaffffffff&#39;</span>
198
+ </pre></div>
199
+ </div>
200
+ <p>The isometry signature can be strengthened to include the peripheral curves
201
+ such that it is a complete invariant of a hyperbolic link:</p>
202
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">sage</span><span class="p">:</span> <span class="n">M</span> <span class="o">=</span> <span class="n">Manifold</span><span class="p">(</span><span class="s2">&quot;L5a1&quot;</span><span class="p">)</span>
203
+ <span class="n">sage</span><span class="p">:</span> <span class="n">M</span><span class="o">.</span><span class="n">isometry_signature</span><span class="p">(</span><span class="n">of_link</span> <span class="o">=</span> <span class="kc">True</span><span class="p">,</span> <span class="n">verified</span> <span class="o">=</span> <span class="kc">True</span><span class="p">)</span>
204
+ <span class="s1">&#39;eLPkbdcddhgggb_baCbbaCb&#39;</span>
205
+ </pre></div>
206
+ </div>
207
+ <p>See <a class="reference internal" href="manifold.html#snappy.Manifold.isometry_signature" title="snappy.Manifold.isometry_signature"><code class="xref py py-meth docutils literal notranslate"><span class="pre">isometry_signature()</span></code></a> for details.</p>
208
+ <p><strong>Remark:</strong> The isometry signature is based on the canonical
209
+ retriangulation so the same warning applies.</p>
210
+ </li>
211
+ <li><p>The maximal cusp area matrix which characterizes the configuration
212
+ space of disjoint cusp neighborhoods with
213
+ <a class="reference internal" href="manifold.html#snappy.Manifold.cusp_area_matrix" title="snappy.Manifold.cusp_area_matrix"><code class="xref py py-meth docutils literal notranslate"><span class="pre">cusp_area_matrix()</span></code></a>:</p>
214
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span>sage: M=Manifold(&quot;m203&quot;)
215
+ sage: M.cusp_area_matrix(method=&#39;maximal&#39;, verified=True)
216
+ [ 27.000000? 9.0000000000?]
217
+ [9.0000000000? 27.0000000?]
218
+ </pre></div>
219
+ </div>
220
+ <p>In this example, the cusp neighborhood about cusp 0 or 1 is only
221
+ embedded if and only if its area is less than sqrt(27). The cusp
222
+ neighborhood about cusp 0 is only disjoint from the one about cusp 1
223
+ if and only if the product of their areas is less than 9.</p>
224
+ </li>
225
+ <li><p>Compute areas for disjoint cusp neighborhoods with
226
+ <a class="reference internal" href="manifold.html#snappy.Manifold.cusp_areas" title="snappy.Manifold.cusp_areas"><code class="xref py py-meth docutils literal notranslate"><span class="pre">cusp_areas()</span></code></a>:</p>
227
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span>sage: M=Manifold(&quot;m203&quot;)
228
+ sage: M.cusp_areas(policy = &#39;unbiased&#39;, method=&#39;maximal&#39;, verified = True)
229
+ [3.00000000000?, 3.00000000000?]
230
+ </pre></div>
231
+ </div>
232
+ <p>With the above parameters, the result is intrinsic to the hyperbolic
233
+ manifold with labeled cusped.</p>
234
+ </li>
235
+ <li><p>Find all slopes of length less or equal to 6 when measured on the boundary
236
+ of disjoint cusp neighborhoods:</p>
237
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">sage</span><span class="p">:</span> <span class="n">M</span><span class="o">=</span><span class="n">Manifold</span><span class="p">(</span><span class="s2">&quot;m203&quot;</span><span class="p">)</span>
238
+ <span class="n">sage</span><span class="p">:</span> <span class="n">M</span><span class="o">.</span><span class="n">short_slopes</span><span class="p">(</span><span class="n">policy</span> <span class="o">=</span> <span class="s1">&#39;unbiased&#39;</span><span class="p">,</span> <span class="n">method</span><span class="o">=</span><span class="s1">&#39;maximal&#39;</span><span class="p">,</span> <span class="n">verified</span> <span class="o">=</span> <span class="kc">True</span><span class="p">)</span>
239
+ <span class="p">[[(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">0</span><span class="p">),</span> <span class="o">...</span><span class="p">,</span> <span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">)],</span> <span class="p">[(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">0</span><span class="p">),</span> <span class="o">...</span><span class="p">,</span> <span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">)]]</span>
240
+ </pre></div>
241
+ </div>
242
+ <p>First block has all short slopes for first cusp, …, see
243
+ <a class="reference internal" href="manifold.html#snappy.Manifold.short_slopes" title="snappy.Manifold.short_slopes"><code class="xref py py-meth docutils literal notranslate"><span class="pre">short_slopes()</span></code></a> for details.</p>
244
+ <p>By <a class="reference external" href="http://arxiv.org/abs/math/9906183">Agol’s</a> and <a class="reference external" href="http://arxiv.org/abs/math/9808120">Lackenby’s</a> 6-Theorem any Dehn-filling
245
+ resulting in a non-hyperbolic manifold must contain one of the above
246
+ slopes. Thus, <a class="reference internal" href="manifold.html#snappy.Manifold.short_slopes" title="snappy.Manifold.short_slopes"><code class="xref py py-meth docutils literal notranslate"><span class="pre">short_slopes()</span></code></a> can be used
247
+ to implement the techniques to find exceptional Dehn surgeries
248
+ (<a class="reference external" href="https://arxiv.org/abs/1109.0903">arXiv:1109.0903</a> and
249
+ <a class="reference external" href="https://arxiv.org/abs/1310.3472">arXiv:1310.3472</a>).</p>
250
+ </li>
251
+ <li><p>An example of finding all geodesics up to length 1:</p>
252
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">sage</span><span class="p">:</span> <span class="kn">from</span> <span class="nn">sage.all</span> <span class="kn">import</span> <span class="n">RIF</span>
253
+ <span class="n">sage</span><span class="p">:</span> <span class="n">L</span> <span class="o">=</span> <span class="n">RIF</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
254
+ <span class="n">sage</span><span class="p">:</span> <span class="n">M</span> <span class="o">=</span> <span class="n">Manifold</span><span class="p">(</span><span class="s2">&quot;m003&quot;</span><span class="p">)</span>
255
+ <span class="n">sage</span><span class="p">:</span> <span class="n">spec</span> <span class="o">=</span> <span class="n">M</span><span class="o">.</span><span class="n">length_spectrum_alt_gen</span><span class="p">(</span><span class="n">verified</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
256
+ <span class="n">sage</span><span class="p">:</span> <span class="n">n</span> <span class="o">=</span> <span class="mi">0</span>
257
+ <span class="n">sage</span><span class="p">:</span> <span class="k">for</span> <span class="n">g</span> <span class="ow">in</span> <span class="n">spec</span><span class="p">:</span>
258
+ <span class="o">...</span> <span class="k">if</span> <span class="n">g</span><span class="o">.</span><span class="n">length</span><span class="o">.</span><span class="n">real</span><span class="p">()</span> <span class="o">&gt;</span> <span class="n">L</span><span class="p">:</span>
259
+ <span class="o">...</span> <span class="k">break</span> <span class="c1"># Done! All subsequent geodesics will be longer.</span>
260
+ <span class="o">...</span> <span class="k">if</span> <span class="n">g</span><span class="o">.</span><span class="n">length</span><span class="o">.</span><span class="n">real</span><span class="p">()</span> <span class="o">&lt;</span> <span class="n">L</span><span class="p">:</span>
261
+ <span class="o">...</span> <span class="n">n</span> <span class="o">+=</span> <span class="mi">1</span>
262
+ <span class="o">...</span> <span class="k">continue</span>
263
+ <span class="o">...</span> <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">&quot;Interval too large. Increase precision.&quot;</span><span class="p">)</span>
264
+ <span class="n">sage</span><span class="p">:</span> <span class="n">n</span>
265
+ <span class="mi">4</span>
266
+ </pre></div>
267
+ </div>
268
+ </li>
269
+ </ul>
270
+ <p>Additionally, we can compute complex intervals for the shapes that are
271
+ guaranteed to contain a true solution to the rectangular gluing equations
272
+ that is not necessarily a geometric solution (specify <code class="xref py py-attr docutils literal notranslate"><span class="pre">bits_prec</span></code>
273
+ or <code class="xref py py-attr docutils literal notranslate"><span class="pre">dec_prec</span></code> for higher precision intervals.):</p>
274
+ <div class="highlight-default notranslate"><div class="highlight"><pre><span></span>sage: M = Manifold(&quot;m015(3,1)&quot;)
275
+ sage: M.tetrahedra_shapes(&#39;rect&#39;, intervals=True)
276
+ [0.625222762246? + 3.177940133813?*I,
277
+ -0.0075523593782? + 0.5131157955971?*I,
278
+ 0.6515818912107? - 0.1955023488930?*I]
279
+ </pre></div>
280
+ </div>
281
+ <p>This is all based on a reimplementation of <a class="reference external" href="http://www.oishi.info.waseda.ac.jp/~takayasu/hikmot/">HIKMOT</a> which
282
+ pioneered the use of interval methods for hyperbolic manifolds (also see
283
+ <a class="reference external" href="http://ww2.ii.uj.edu.pl/~zgliczyn/cap07/krawczyk.pdf">Zgliczynski’s notes</a>). It
284
+ can be used in a way very similar to HIKMOT, but uses Sage’s complex
285
+ interval types for certification. It furthermore makes use of code by
286
+ <a class="reference external" href="http://arxiv.org/abs/1407.7827/">Dunfield, Hoffman, Licata</a>.</p>
287
+ <p>This verification code was contributed by Matthias Goerner.</p>
288
+ </section>
289
+ <section id="verified-computation-topics">
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+ <h2>Verified computation topics<a class="headerlink" href="#verified-computation-topics" title="Link to this heading"></a></h2>
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+ <div class="toctree-wrapper compound">
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+ <ul>
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+ <li class="toctree-l1"><a class="reference internal" href="verify_internals.html">Internals of verified computations</a></li>
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+ </ul>
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+ </div>
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+ </section>
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