snappy 3.2__cp310-cp310-macosx_10_12_x86_64.whl
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- snappy/ptolemy/testing_files_rur/m052__sl3_c0.rur.bz2 +0 -0
- snappy/ptolemy/utilities.py +236 -0
- snappy/raytracing/__init__.py +64 -0
- snappy/raytracing/additional_horospheres.py +64 -0
- snappy/raytracing/additional_len_spec_choices.py +63 -0
- snappy/raytracing/cohomology_fractal.py +197 -0
- snappy/raytracing/eyeball.py +123 -0
- snappy/raytracing/finite_raytracing_data.py +237 -0
- snappy/raytracing/finite_viewer.py +590 -0
- snappy/raytracing/geodesic_tube_info.py +174 -0
- snappy/raytracing/geodesics.py +246 -0
- snappy/raytracing/geodesics_window.py +258 -0
- snappy/raytracing/gui_utilities.py +293 -0
- snappy/raytracing/hyperboloid_navigation.py +556 -0
- snappy/raytracing/hyperboloid_utilities.py +234 -0
- snappy/raytracing/ideal_raytracing_data.py +592 -0
- snappy/raytracing/inside_viewer.py +974 -0
- snappy/raytracing/pack.py +22 -0
- snappy/raytracing/raytracing_data.py +126 -0
- snappy/raytracing/raytracing_view.py +454 -0
- snappy/raytracing/shaders/Eye.png +0 -0
- snappy/raytracing/shaders/NonGeometric.png +0 -0
- snappy/raytracing/shaders/__init__.py +101 -0
- snappy/raytracing/shaders/fragment.glsl +1744 -0
- snappy/raytracing/test.py +29 -0
- snappy/raytracing/tooltip.py +146 -0
- snappy/raytracing/upper_halfspace_utilities.py +98 -0
- snappy/raytracing/view_scale_controller.py +98 -0
- snappy/raytracing/zoom_slider/__init__.py +263 -0
- snappy/raytracing/zoom_slider/inward.png +0 -0
- snappy/raytracing/zoom_slider/inward18.png +0 -0
- snappy/raytracing/zoom_slider/outward.png +0 -0
- snappy/raytracing/zoom_slider/outward18.png +0 -0
- snappy/raytracing/zoom_slider/test.py +20 -0
- snappy/sage_helper.py +117 -0
- snappy/settings.py +409 -0
- snappy/shell.py +53 -0
- snappy/snap/__init__.py +114 -0
- snappy/snap/character_varieties.py +375 -0
- snappy/snap/find_field.py +372 -0
- snappy/snap/fundamental_polyhedron.py +569 -0
- snappy/snap/generators.py +39 -0
- snappy/snap/interval_reps.py +81 -0
- snappy/snap/kernel_structures.py +128 -0
- snappy/snap/mcomplex_base.py +18 -0
- snappy/snap/nsagetools.py +702 -0
- snappy/snap/peripheral/__init__.py +1 -0
- snappy/snap/peripheral/dual_cellulation.py +219 -0
- snappy/snap/peripheral/link.py +127 -0
- snappy/snap/peripheral/peripheral.py +159 -0
- snappy/snap/peripheral/surface.py +522 -0
- snappy/snap/peripheral/test.py +35 -0
- snappy/snap/polished_reps.py +335 -0
- snappy/snap/shapes.py +152 -0
- snappy/snap/slice_obs_HKL.py +668 -0
- snappy/snap/t3mlite/__init__.py +2 -0
- snappy/snap/t3mlite/arrow.py +243 -0
- snappy/snap/t3mlite/corner.py +22 -0
- snappy/snap/t3mlite/edge.py +172 -0
- snappy/snap/t3mlite/face.py +37 -0
- snappy/snap/t3mlite/files.py +211 -0
- snappy/snap/t3mlite/homology.py +53 -0
- snappy/snap/t3mlite/linalg.py +419 -0
- snappy/snap/t3mlite/mcomplex.py +1499 -0
- snappy/snap/t3mlite/perm4.py +320 -0
- snappy/snap/t3mlite/setup.py +12 -0
- snappy/snap/t3mlite/simplex.py +199 -0
- snappy/snap/t3mlite/spun.py +297 -0
- snappy/snap/t3mlite/surface.py +519 -0
- snappy/snap/t3mlite/test.py +20 -0
- snappy/snap/t3mlite/test_vs_regina.py +86 -0
- snappy/snap/t3mlite/tetrahedron.py +109 -0
- snappy/snap/t3mlite/vertex.py +42 -0
- snappy/snap/test.py +134 -0
- snappy/snap/utilities.py +288 -0
- snappy/test.py +209 -0
- snappy/test_cases.py +263 -0
- snappy/testing.py +131 -0
- snappy/tiling/__init__.py +2 -0
- snappy/tiling/canonical_key_dict.py +59 -0
- snappy/tiling/dict_based_set.py +79 -0
- snappy/tiling/floor.py +49 -0
- snappy/tiling/hyperboloid_dict.py +54 -0
- snappy/tiling/iter_utils.py +78 -0
- snappy/tiling/lifted_tetrahedron.py +22 -0
- snappy/tiling/lifted_tetrahedron_set.py +54 -0
- snappy/tiling/real_hash_dict.py +164 -0
- snappy/tiling/test.py +23 -0
- snappy/tiling/tile.py +215 -0
- snappy/tiling/triangle.py +33 -0
- snappy/tkterminal.py +920 -0
- snappy/twister/__init__.py +20 -0
- snappy/twister/main.py +646 -0
- snappy/twister/surfaces/S_0_1 +3 -0
- snappy/twister/surfaces/S_0_2 +3 -0
- snappy/twister/surfaces/S_0_4 +7 -0
- snappy/twister/surfaces/S_0_4_Lantern +8 -0
- snappy/twister/surfaces/S_1 +3 -0
- snappy/twister/surfaces/S_1_1 +4 -0
- snappy/twister/surfaces/S_1_2 +5 -0
- snappy/twister/surfaces/S_1_2_5 +6 -0
- snappy/twister/surfaces/S_2 +6 -0
- snappy/twister/surfaces/S_2_1 +8 -0
- snappy/twister/surfaces/S_2_heeg +10 -0
- snappy/twister/surfaces/S_3 +8 -0
- snappy/twister/surfaces/S_3_1 +10 -0
- snappy/twister/surfaces/S_4_1 +12 -0
- snappy/twister/surfaces/S_5_1 +14 -0
- snappy/twister/surfaces/heeg_fig8 +9 -0
- snappy/twister/twister_core.cpython-310-darwin.so +0 -0
- snappy/upper_halfspace/__init__.py +146 -0
- snappy/upper_halfspace/ideal_point.py +26 -0
- snappy/verify/__init__.py +13 -0
- snappy/verify/canonical.py +542 -0
- snappy/verify/complex_volume/__init__.py +18 -0
- snappy/verify/complex_volume/adjust_torsion.py +86 -0
- snappy/verify/complex_volume/closed.py +168 -0
- snappy/verify/complex_volume/compute_ptolemys.py +90 -0
- snappy/verify/complex_volume/cusped.py +56 -0
- snappy/verify/complex_volume/extended_bloch.py +201 -0
- snappy/verify/cusp_translations.py +85 -0
- snappy/verify/edge_equations.py +80 -0
- snappy/verify/exceptions.py +254 -0
- snappy/verify/hyperbolicity.py +224 -0
- snappy/verify/interval_newton_shapes_engine.py +523 -0
- snappy/verify/interval_tree.py +400 -0
- snappy/verify/krawczyk_shapes_engine.py +518 -0
- snappy/verify/maximal_cusp_area_matrix/__init__.py +46 -0
- snappy/verify/maximal_cusp_area_matrix/cusp_tiling_engine.py +419 -0
- snappy/verify/maximal_cusp_area_matrix/cusp_translate_engine.py +153 -0
- snappy/verify/real_algebra.py +286 -0
- snappy/verify/shapes.py +25 -0
- snappy/verify/short_slopes.py +200 -0
- snappy/verify/square_extensions.py +1005 -0
- snappy/verify/test.py +78 -0
- snappy/verify/upper_halfspace/__init__.py +9 -0
- snappy/verify/upper_halfspace/extended_matrix.py +100 -0
- snappy/verify/upper_halfspace/finite_point.py +283 -0
- snappy/verify/upper_halfspace/ideal_point.py +426 -0
- snappy/verify/volume.py +128 -0
- snappy/version.py +2 -0
- snappy-3.2.dist-info/METADATA +58 -0
- snappy-3.2.dist-info/RECORD +503 -0
- snappy-3.2.dist-info/WHEEL +5 -0
- snappy-3.2.dist-info/entry_points.txt +2 -0
- snappy-3.2.dist-info/top_level.txt +28 -0
snappy/drilling/crush.py
ADDED
@@ -0,0 +1,270 @@
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from .cusps import CuspPostDrillInfo
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from .peripheral_curves import install_peripheral_curves
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from .barycentric import transpositions, perm_to_index
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from ..snap.t3mlite import Tetrahedron, Perm4, Mcomplex, simplex
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from typing import Set, Sequence
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def crush_geodesic_pieces(tetrahedra : Sequence[Tetrahedron]) -> Mcomplex:
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"""
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Given tetrahedra produced by traverse_geodesics_to_subdivide,
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compute the barycentric subdivision and crush all subtetrahedra in the
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barycentric subdivision that have been marked as being adjacent to an edge
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that coincides with a GeodesicPiece.
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The function mark_subtetrahedra_about_geodesic_pieces marks the
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subtetrahedra as described above.
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"""
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# We call the tetrahedra in the barycentric subdivision subtetrahedra
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# to distinguish them from the original tetrahedra.
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# We order the vertices of a subtetrahedra such that 0 corresponds to an
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# original vertex, vertex 1 to an edge center, ... of a tetrahedron.
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# This means that half of the subtetrahedra have the orientation
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# reversed from the tetrahedron.
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# While it is conceptually easier to think of creating the barycentric
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# subdivision and then doing the crushing in two steps, we actually do
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# not create a separate Mcomplex for the intermediate barycentric
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# subdivison.
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# Recall that each subtetrahedron in the barycentric subdivision
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# is given by a pair of a tetrahedron tet and a permutation p.
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# Using the index i that p has in Perm4.S4, we index
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# a subtetrahedron by 24 * tet.Index + i.
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# The subtetrahedra that are supposed to be curshed in the barycentric
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# are assumed to be marked in tet.marked_subtetrahedra.
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#
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# Later, we also pick a subtetrahedron for each simple closed curve to
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# compute a new meridian and longitude.
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# Use bit mask to create the subtetrahedra surviving the crushing.
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subtetrahedra = [
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Tetrahedron() if marked_subtet == 0 else None
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for tet in tetrahedra
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for marked_subtet in tet.marked_subtetrahedra ]
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_assign_orientations(subtetrahedra)
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# Now glue the subtetrahedra in the crushed complex.
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# Also carry forward post drill infos and peripheral curves.
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for tet in tetrahedra:
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for i, perm in enumerate(Perm4.S4()):
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subtet_index = 24 * tet.Index + i
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subtet = subtetrahedra[subtet_index]
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if subtet is None:
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continue
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# The gluings internal (between subtetrahedra of the
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# same tetrahedron)
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for face in range(3):
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other_perm = perm * transpositions[face]
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j = perm_to_index(other_perm)
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other_subtet_index = 24 * tet.Index + j
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if face == 1 and tet.marked_subtetrahedra[j] != 0:
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# We are processing subtetrahedron t and its
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# neighbor c is adjacent to a GeodesicPiece (=)
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# and thus it and its neighbor c' get crushed.
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# Thus, we need to glue t to t'.
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#
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# 0
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# /|\
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# / | \
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# / | \
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# / | \
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# 1* | *1
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# / * | * \
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# / t 2 t' \
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# / * | * \
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# / * | * \
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# / * | * \
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# / * c | c' * \
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# / * | * \
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# 0============1============0
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#
|
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other_perm = perm * Perm4((2,1,0,3))
|
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j = perm_to_index(other_perm)
|
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other_subtet_index = 24 * tet.Index + j
|
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# attach is working symmetrically also setting the Neighbors
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# and Gluings of the other tetrahedron, so only call it once
|
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# per face-pairing
|
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if j > i:
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subtet.attach(simplex.TwoSubsimplices[face],
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subtetrahedra[other_subtet_index],
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(0,1,2,3))
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# The external gluing.
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vertex = perm.image(simplex.V0)
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face = perm.image(simplex.F3)
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other_tet = tet.Neighbor[face]
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other_perm = tet.Gluing[face] * perm
|
105
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j = perm_to_index(other_perm)
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106
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other_subtet_index = 24 * other_tet.Index + j
|
107
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if other_subtet_index > subtet_index:
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subtet.attach(simplex.F3,
|
109
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subtetrahedra[other_subtet_index],
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(0,1,2,3))
|
111
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# Only vertex 0 corresponds to an original vertex.
|
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# The other vertices will actually be finite, i.e., have
|
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# spherical vertex links.
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subtet.post_drill_infos = {
|
116
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simplex.V0 : tet.post_drill_infos[vertex],
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simplex.V1 : CuspPostDrillInfo(),
|
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simplex.V2 : CuspPostDrillInfo(),
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simplex.V3 : CuspPostDrillInfo() }
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# Transfer peripheral curves. Note that for the same reason
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# this is only relevant for vertex 0.
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#
|
124
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# Recall that SnapPea stores the peripheral curves on the
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125
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# half-edges of the dual 1-skeleton of the cusp triangulation.
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#
|
127
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# tet.PeripheralCurves is a structure similar to the one in the
|
128
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# SnapPea kernel (see peripheral_curves.c for more info) nested
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# as follows:
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130
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# - list for meridian and longitude
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131
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# - list for sheets in orientation double-cover of cusp triangle
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# - dict with key being the vertex where the cusp triangle is
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# - dict with key being a face of tetrahedron. The face intersects
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# the cusp triangle in an edge. The value says how often the
|
135
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# dual half-edge participates in the peripheral curve.
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#
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# After the barycentric subdivision, the original cusp triangle
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# is split as shown:
|
139
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#
|
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# 1
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# /|\
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# / | \
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# / | \
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# / | \ The six new cusp triangles
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# 2* | *2
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# / * | * \
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# / 3 \
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# / * | * \
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# / * | * \
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# / * | * \
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# / * | * \
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# / * | * \
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# 1------------2------------1
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#
|
155
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# We first transfer the original peripheral curves to the dual
|
156
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# half-edges opposite vertex 3 in the above picture.
|
157
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# The resulting chain will thus temporarily fail to be a cycle.
|
158
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# Later, we fix the chains to be cycles again by adding values
|
159
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# to the half-edges forming a circle about vertex 3 in the
|
160
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# above picture - in _fix_all_peripheral_curves.
|
161
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+
|
162
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subtet.needs_peripheral_curves_fixed = False
|
163
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subtet.PeripheralCurves = [
|
164
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+
[ { v : { f : 0 for f in simplex.TwoSubsimplices }
|
165
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+
for v in simplex.ZeroSubsimplices }
|
166
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+
for sheet in range(2) ]
|
167
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+
for ml in range(2) ]
|
168
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+
for ml in range(2): # For meridian and longitude
|
169
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+
for sheet in range(2): # For two-sheets in orientation-double cover
|
170
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+
p = tet.PeripheralCurves[ml][sheet][vertex][face]
|
171
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+
# Note that in the above picture, an edge of the original
|
172
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+
# cusp triangle is split into two. Thus, we have two triangles
|
173
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+
# to pick from when transferring the value of an old dualf
|
174
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+
# half-edge to the new cusp triangles.
|
175
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+
#
|
176
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+
# We do these choices so that the cycle condition is at least
|
177
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+
# fulfilled for the edges coinciding with the edges of the
|
178
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# original cusp triangle.
|
179
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+
if p > 0 and perm.sign() == 0:
|
180
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+
subtet.PeripheralCurves[ml][sheet][simplex.V0][simplex.F3] = p
|
181
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+
subtet.needs_peripheral_curves_fixed = True
|
182
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+
elif p < 0 and perm.sign() == 1:
|
183
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+
subtet.PeripheralCurves[ml][1 - sheet][simplex.V0][simplex.F3] = p
|
184
|
+
|
185
|
+
_fix_all_peripheral_curves(subtetrahedra)
|
186
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+
|
187
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+
# Find peripheral curves for each cusps created by crushing the simple
|
188
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+
# closed curves.
|
189
|
+
# Record which of these cusps was already processed to only do this once
|
190
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+
# per cusp.
|
191
|
+
new_cusp_indices : Set[int] = set()
|
192
|
+
for tet in tetrahedra:
|
193
|
+
for perm, orientation in zip(Perm4.S4(), tet.marked_subtetrahedra):
|
194
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+
# We found a subtetrahedron adjacent to a geodesic piece.
|
195
|
+
#
|
196
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+
# Make sure its 0-1 edge is parallel and not anti-parallel to
|
197
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+
# the geodesic piece. This way the longitude will be parallel to
|
198
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+
# the geodesic piece.
|
199
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+
if orientation != +1:
|
200
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+
continue
|
201
|
+
# Check orientation of subtetrahedron so that the orientation of
|
202
|
+
# the meridian relative to the longitude matches the orientation of the
|
203
|
+
# cusp.
|
204
|
+
if perm.sign() == 1:
|
205
|
+
continue
|
206
|
+
v : int = perm.image(simplex.V0)
|
207
|
+
cusp_index : int = tet.post_drill_infos[v].index
|
208
|
+
if cusp_index is None:
|
209
|
+
raise Exception("Vertex on geodesic has no assigned cusp")
|
210
|
+
if cusp_index in new_cusp_indices:
|
211
|
+
continue
|
212
|
+
# First time we encounter this simple closed curve. Pick a base
|
213
|
+
# tet to install the meridian and longitude.
|
214
|
+
# This base tet better not be one of the subtetrahedra that is
|
215
|
+
# crushed. So pick a neighbor of the subtetrahedron adjacent
|
216
|
+
# to the geodesic piece.
|
217
|
+
other_perm = perm * transpositions[1]
|
218
|
+
subtet_index = 24 * tet.Index + perm_to_index(other_perm)
|
219
|
+
install_peripheral_curves(subtetrahedra[subtet_index])
|
220
|
+
new_cusp_indices.add(cusp_index)
|
221
|
+
|
222
|
+
# To preserve the orientation, make sure that the first subtetrahedron
|
223
|
+
# we pass to Mcomplex has the same orientation as the original tetrahedron
|
224
|
+
# - since the SnapPea kernel will use the first tetrahedron of an
|
225
|
+
# orientable triangulation to orient it.
|
226
|
+
return Mcomplex([ subtet
|
227
|
+
for s in [0, 1]
|
228
|
+
for subtet in subtetrahedra
|
229
|
+
if subtet and subtet.orientation == s ])
|
230
|
+
|
231
|
+
def _assign_orientations(subtetrahedra):
|
232
|
+
for j in range(len(subtetrahedra) // 24):
|
233
|
+
for i, perm in enumerate(Perm4.S4()):
|
234
|
+
subtet_index = 24 * j + i
|
235
|
+
subtet = subtetrahedra[subtet_index]
|
236
|
+
if subtet:
|
237
|
+
subtet.orientation = perm.sign()
|
238
|
+
|
239
|
+
|
240
|
+
def _fix_peripheral_curves(subtet):
|
241
|
+
"""
|
242
|
+
Traverse the six new cusp triangles shown in one
|
243
|
+
of the figures in crush_geodesic_pieces.
|
244
|
+
"""
|
245
|
+
for i in range(6):
|
246
|
+
subtet.needs_peripheral_curves_fixed = False
|
247
|
+
|
248
|
+
if i % 2 == 0:
|
249
|
+
face0, face1 = simplex.F1, simplex.F2
|
250
|
+
else:
|
251
|
+
face0, face1 = simplex.F2, simplex.F1
|
252
|
+
neighbor = subtet.Neighbor[face1]
|
253
|
+
for ml in range(2):
|
254
|
+
for sheet in range(2):
|
255
|
+
tri = subtet.PeripheralCurves[ml][sheet][simplex.V0]
|
256
|
+
p = tri[face0] + tri[simplex.F3]
|
257
|
+
tri[face1] = -p
|
258
|
+
neighbor.PeripheralCurves[ml][1-sheet][simplex.V0][face1] = p
|
259
|
+
subtet = neighbor
|
260
|
+
|
261
|
+
|
262
|
+
def _fix_all_peripheral_curves(subtetrahedra):
|
263
|
+
"""
|
264
|
+
Fix peripheral curves for all subtetrahedra that require it, see
|
265
|
+
crush_geodesic_pieces where the needs_peripheral_curves_fixed flag
|
266
|
+
was raised for details.
|
267
|
+
"""
|
268
|
+
for subtet in subtetrahedra:
|
269
|
+
if subtet and subtet.needs_peripheral_curves_fixed:
|
270
|
+
_fix_peripheral_curves(subtet)
|
snappy/drilling/cusps.py
ADDED
@@ -0,0 +1,125 @@
|
|
1
|
+
from ..geometric_structure.geodesic.geodesic_start_point_info import GeodesicStartPointInfo
|
2
|
+
from ..geometric_structure import Filling, FillingMatrix
|
3
|
+
|
4
|
+
from ..snap.t3mlite import Mcomplex, simplex
|
5
|
+
|
6
|
+
from . import exceptions
|
7
|
+
|
8
|
+
from typing import Tuple, Optional, Sequence
|
9
|
+
|
10
|
+
# @dataclass
|
11
|
+
|
12
|
+
|
13
|
+
class CuspPostDrillInfo:
|
14
|
+
"""
|
15
|
+
Information carried around to be applied after drilling
|
16
|
+
the manifold when re-indexing the cusps, re-applying the
|
17
|
+
Dehn-fillings or changing the peripheral curve when drilling
|
18
|
+
a core curve.
|
19
|
+
|
20
|
+
Note that we store this information sometime on a
|
21
|
+
snappy.snap.t3mlite.Vertex as post_drill_info and sometimes
|
22
|
+
as a dictionary tet.post_drill_infos on each tetrahedron assigning
|
23
|
+
a CuspPostDrillInfo to each vertex of the tetrahedron. The latter
|
24
|
+
representation is more redundant as we need to store the same
|
25
|
+
CuspPostDrillInfo to each vertex of each tetrahedron belonging to
|
26
|
+
the same vertex class - but is also more convenient in certain
|
27
|
+
circumstances.
|
28
|
+
"""
|
29
|
+
|
30
|
+
def __init__(self,
|
31
|
+
# Index this vertex will have in the drilled manifold.
|
32
|
+
# None if vertex is a finite vertex.
|
33
|
+
index : Optional[int] = None,
|
34
|
+
# Filling that needs to be applied after drilling the
|
35
|
+
# manifold. (0,0) if cusps will be left unfilled.
|
36
|
+
filling : Filling = (0, 0),
|
37
|
+
# Optional adjustment of peripheral curves performed
|
38
|
+
# to drilled manifold with Manifold.set_peripheral_curves.
|
39
|
+
peripheral_matrix : Optional[FillingMatrix] = None):
|
40
|
+
self.index = index
|
41
|
+
self.filling = filling
|
42
|
+
self.peripheral_matrix = peripheral_matrix
|
43
|
+
|
44
|
+
def __eq__(self, other):
|
45
|
+
"""
|
46
|
+
Used for debugging.
|
47
|
+
"""
|
48
|
+
return (self.index == self.index and
|
49
|
+
self.filling == self.filling and
|
50
|
+
self.peripheral_matrix == self.peripheral_matrix)
|
51
|
+
|
52
|
+
|
53
|
+
def index_geodesics_and_add_post_drill_infos(
|
54
|
+
geodesics : Sequence[GeodesicStartPointInfo],
|
55
|
+
mcomplex : Mcomplex) -> None:
|
56
|
+
|
57
|
+
all_reindexed_verts = {
|
58
|
+
g.core_curve_cusp for g in geodesics if g.core_curve_cusp}
|
59
|
+
|
60
|
+
old_vertices = [v for v in mcomplex.Vertices
|
61
|
+
if v not in all_reindexed_verts]
|
62
|
+
|
63
|
+
for i, v in enumerate(old_vertices):
|
64
|
+
v.post_drill_info = CuspPostDrillInfo(
|
65
|
+
index=i, filling=v.filling_matrix[0])
|
66
|
+
|
67
|
+
n = len(old_vertices)
|
68
|
+
|
69
|
+
for i, g in enumerate(geodesics):
|
70
|
+
if g.core_curve_cusp:
|
71
|
+
if g.core_curve_multiplicity not in [-1, +1]:
|
72
|
+
raise exceptions.GeodesicMultipleOfCoreCurve(
|
73
|
+
g.word, g.core_curve_multiplicity)
|
74
|
+
|
75
|
+
g.core_curve_cusp.post_drill_info = CuspPostDrillInfo(
|
76
|
+
index=n + i,
|
77
|
+
peripheral_matrix=_multiply_filling_matrix(
|
78
|
+
g.core_curve_cusp.filling_matrix,
|
79
|
+
g.core_curve_multiplicity))
|
80
|
+
else:
|
81
|
+
g.index = n + i
|
82
|
+
|
83
|
+
for tet in mcomplex.Tetrahedra:
|
84
|
+
tet.post_drill_infos = {
|
85
|
+
V : tet.Class[V].post_drill_info
|
86
|
+
for V in simplex.ZeroSubsimplices }
|
87
|
+
|
88
|
+
|
89
|
+
def reorder_vertices_and_get_post_drill_infos(
|
90
|
+
mcomplex : Mcomplex) -> Sequence[CuspPostDrillInfo]:
|
91
|
+
|
92
|
+
cusp_vertices_dict = { }
|
93
|
+
finite_vertices = [ ]
|
94
|
+
for vert in mcomplex.Vertices:
|
95
|
+
c = vert.Corners[0]
|
96
|
+
post_drill_info = c.Tetrahedron.post_drill_infos[c.Subsimplex]
|
97
|
+
vert.post_drill_info = post_drill_info
|
98
|
+
if post_drill_info.index is None:
|
99
|
+
finite_vertices.append(vert)
|
100
|
+
else:
|
101
|
+
cusp_vertices_dict[post_drill_info.index] = vert
|
102
|
+
|
103
|
+
cusp_vertices = [ cusp_vertices_dict[i]
|
104
|
+
for i in range(len(cusp_vertices_dict)) ]
|
105
|
+
|
106
|
+
mcomplex.Vertices = cusp_vertices + finite_vertices
|
107
|
+
|
108
|
+
return [ v.post_drill_info for v in cusp_vertices ]
|
109
|
+
|
110
|
+
|
111
|
+
def refill_and_adjust_peripheral_curves(
|
112
|
+
manifold,
|
113
|
+
post_drill_infos : Sequence[CuspPostDrillInfo]) -> None:
|
114
|
+
|
115
|
+
manifold.dehn_fill([ info.filling for info in post_drill_infos])
|
116
|
+
|
117
|
+
for info in post_drill_infos:
|
118
|
+
if info.peripheral_matrix is not None:
|
119
|
+
manifold.set_peripheral_curves(
|
120
|
+
info.peripheral_matrix, which_cusp=info.index)
|
121
|
+
|
122
|
+
|
123
|
+
def _multiply_filling_matrix(m : FillingMatrix, s : int) -> FillingMatrix:
|
124
|
+
return ((s * m[0][0], s * m[0][1]),
|
125
|
+
(s * m[1][0], s * m[1][1]))
|
snappy/drilling/debug.py
ADDED
@@ -0,0 +1,242 @@
|
|
1
|
+
from ..snap.t3mlite import simplex
|
2
|
+
from ..matrix import make_identity_matrix
|
3
|
+
from ..hyperboloid import *
|
4
|
+
|
5
|
+
|
6
|
+
def _find_all_tetrahedra(tet):
|
7
|
+
result = [ ]
|
8
|
+
pending_tets = [ tet ]
|
9
|
+
visited_tets = set()
|
10
|
+
while pending_tets:
|
11
|
+
tet = pending_tets.pop()
|
12
|
+
if tet not in visited_tets:
|
13
|
+
visited_tets.add(tet)
|
14
|
+
result.append(tet)
|
15
|
+
for neighbor in tet.Neighbor.values():
|
16
|
+
pending_tets.append(neighbor)
|
17
|
+
return result
|
18
|
+
|
19
|
+
|
20
|
+
def check_peripheral_curves(tets):
|
21
|
+
for tet in tets:
|
22
|
+
for f in simplex.TwoSubsimplices:
|
23
|
+
neighbor = tet.Neighbor[f]
|
24
|
+
gluing = tet.Gluing[f]
|
25
|
+
other_f = gluing.image(f)
|
26
|
+
sgn = gluing.sign()
|
27
|
+
for v in simplex.ZeroSubsimplices:
|
28
|
+
v_comp = simplex.comp(v)
|
29
|
+
other_v = gluing.image(v)
|
30
|
+
for ml in range(2):
|
31
|
+
for sheet_index in range(2):
|
32
|
+
sheet = tet.PeripheralCurves[ml][sheet_index][v]
|
33
|
+
if f == v_comp:
|
34
|
+
if sum(sheet.values()) != 0:
|
35
|
+
raise Exception("Not adding up to zero. %r" % tet)
|
36
|
+
if sheet[v_comp] != 0:
|
37
|
+
raise Exception("Diagonal entry for peripheral curve.")
|
38
|
+
else:
|
39
|
+
if sgn == 0:
|
40
|
+
other_sheet_index = 1 - sheet_index
|
41
|
+
else:
|
42
|
+
other_sheet_index = sheet_index
|
43
|
+
a = sheet[f]
|
44
|
+
b = neighbor.PeripheralCurves[ml][other_sheet_index][other_v][other_f]
|
45
|
+
if a + b != 0:
|
46
|
+
raise Exception("Peripheral curve not adding up.")
|
47
|
+
|
48
|
+
|
49
|
+
def check_vertex_indices(tets):
|
50
|
+
for tet in tets:
|
51
|
+
for v in simplex.ZeroSubsimplices:
|
52
|
+
index = tet.post_drill_infos[v]
|
53
|
+
for f in simplex.TwoSubsimplices:
|
54
|
+
if v & f:
|
55
|
+
if tet.Neighbor[f].post_drill_infos[tet.Gluing[f].image(v)] != index:
|
56
|
+
print("tet, v face:", tet, v, f)
|
57
|
+
print("index and other index:", index, tet.Neighbor[f].post_drill_infos, [tet.Gluing[f].image(v)])
|
58
|
+
raise Exception("Neighbors don't have same vertex.")
|
59
|
+
|
60
|
+
|
61
|
+
def check_points_equal(v0, v1):
|
62
|
+
RF = v0[0].parent()
|
63
|
+
|
64
|
+
if abs(r13_dot(v0, v0)) < RF(1e-10):
|
65
|
+
if abs(r13_dot(v1, v1)) > RF(1e-10):
|
66
|
+
raise Exception("Light-like vs time-like:", v0, v1)
|
67
|
+
if abs(r13_dot(v0, v1)) > RF(1e-10):
|
68
|
+
raise Exception("Non-colinlinear light like:", v0, v1)
|
69
|
+
else:
|
70
|
+
if any(abs(x - y) > RF(1e-10) for x, y in zip(v0, v1)):
|
71
|
+
raise Exception("Different time-like:", v0, v1)
|
72
|
+
|
73
|
+
|
74
|
+
def check_points_consistency(m):
|
75
|
+
for tet in m.Tetrahedra:
|
76
|
+
for F in simplex.TwoSubsimplices:
|
77
|
+
for V in simplex.ZeroSubsimplices:
|
78
|
+
if V & F:
|
79
|
+
check_points_equal(
|
80
|
+
tet.O13_matrices[F] * tet.R13_vertices[V],
|
81
|
+
tet.Neighbor[F].R13_vertices[tet.Gluing[F].image(V)])
|
82
|
+
|
83
|
+
|
84
|
+
def check_edge_consistency(m):
|
85
|
+
RF = m.Tetrahedra[0].O13_matrices[simplex.F0].base_ring()
|
86
|
+
id_matrix = make_identity_matrix(ring=RF, n=4)
|
87
|
+
|
88
|
+
for e in m.Edges:
|
89
|
+
t = id_matrix
|
90
|
+
for tet, perm in e.embeddings():
|
91
|
+
t = tet.O13_matrices[perm.image(simplex.F2)] * t
|
92
|
+
t = t - id_matrix
|
93
|
+
for i in range(4):
|
94
|
+
for j in range(4):
|
95
|
+
if abs(t[i,j]) > RF(1e-10):
|
96
|
+
raise Exception("Edge not gluing up")
|
97
|
+
|
98
|
+
|
99
|
+
def check_geodesic1(tets):
|
100
|
+
RF = tets[0].O13_matrices[simplex.F0].base_ring()
|
101
|
+
|
102
|
+
for tet in tets:
|
103
|
+
for geodesic_segment in tet.geodesic_pieces:
|
104
|
+
if geodesic_segment.tet is not tet:
|
105
|
+
raise Exception("Geodesic tet inconsistency")
|
106
|
+
|
107
|
+
for ptInClass in geodesic_segment.endpoints:
|
108
|
+
if ptInClass.subsimplex in simplex.ZeroSubsimplices:
|
109
|
+
check_points_equal(
|
110
|
+
ptInClass.r13_point,
|
111
|
+
tet.R13_vertices[ptInClass.subsimplex])
|
112
|
+
else:
|
113
|
+
if abs(r13_dot(ptInClass.r13_point, tet.R13_planes[ptInClass.subsimplex])) > RF(1e-10):
|
114
|
+
raise Exception("Point not on plane")
|
115
|
+
|
116
|
+
|
117
|
+
def check_consistency(mcomplex):
|
118
|
+
check_edge_consistency(mcomplex)
|
119
|
+
check_points_consistency(mcomplex)
|
120
|
+
check_geodesic1(mcomplex.Tetrahedra)
|
121
|
+
|
122
|
+
|
123
|
+
def check_consistency_segments(segments):
|
124
|
+
for i in range(len(segments)):
|
125
|
+
s0 = segments[i]
|
126
|
+
s1 = segments[(i+1) % len(segments)]
|
127
|
+
|
128
|
+
if s0.tet.Class[s0.endpoints[1].subsimplex] is not s1.tet.Class[s1.endpoints[0].subsimplex]:
|
129
|
+
raise Exception("Classes of consecutive segments not matching %i" % i)
|
130
|
+
|
131
|
+
if s0.next_ is not s1:
|
132
|
+
raise Exception("Linked list broken (next)")
|
133
|
+
if s1.prev is not s0:
|
134
|
+
raise Exception("Linked list broken (prev)")
|
135
|
+
|
136
|
+
if s0.endpoints[1].subsimplex in simplex.TwoSubsimplices:
|
137
|
+
check_points_equal(
|
138
|
+
s0.tet.O13_matrices[s0.endpoints[1].subsimplex] * s0.endpoints[1].r13_point,
|
139
|
+
s1.endpoints[0].r13_point)
|
140
|
+
|
141
|
+
|
142
|
+
def print_cell(f):
|
143
|
+
if f in simplex.ZeroSubsimplices:
|
144
|
+
return "V"
|
145
|
+
if f in simplex.TwoSubsimplices:
|
146
|
+
return "F"
|
147
|
+
if f == simplex.T:
|
148
|
+
return "T"
|
149
|
+
raise Exception("BLAH")
|
150
|
+
|
151
|
+
|
152
|
+
def output_linked(x, tets_set):
|
153
|
+
y = x
|
154
|
+
while True:
|
155
|
+
# print(y)
|
156
|
+
print(print_cell(y.endpoints[0].subsimplex) + "-----" + print_cell(y.endpoints[1].subsimplex), end=" ")
|
157
|
+
y = y.next_
|
158
|
+
if x is y:
|
159
|
+
break
|
160
|
+
|
161
|
+
print()
|
162
|
+
|
163
|
+
y = x
|
164
|
+
while True:
|
165
|
+
print("%2d---%2d" % (y.endpoints[0].subsimplex, y.endpoints[1].subsimplex), end=" ")
|
166
|
+
y = y.next_
|
167
|
+
if x is y:
|
168
|
+
break
|
169
|
+
|
170
|
+
print()
|
171
|
+
|
172
|
+
y = x
|
173
|
+
while True:
|
174
|
+
if y.tet in tets_set:
|
175
|
+
print(" * ", end=" ")
|
176
|
+
else:
|
177
|
+
print(" ", end=" ")
|
178
|
+
y = y.next_
|
179
|
+
if x is y:
|
180
|
+
break
|
181
|
+
|
182
|
+
print()
|
183
|
+
print()
|
184
|
+
|
185
|
+
|
186
|
+
def flatten_link_list(x):
|
187
|
+
y = x
|
188
|
+
l = []
|
189
|
+
while True:
|
190
|
+
l.append(y)
|
191
|
+
y = y.next_
|
192
|
+
if x is y:
|
193
|
+
return l
|
194
|
+
|
195
|
+
|
196
|
+
def check_consistency_2(piece):
|
197
|
+
tets = _find_all_tetrahedra(piece.tet)
|
198
|
+
|
199
|
+
tets_set = set(tets)
|
200
|
+
|
201
|
+
to_pieces_map = { }
|
202
|
+
|
203
|
+
num_pieces = 0
|
204
|
+
|
205
|
+
for tet in tets:
|
206
|
+
for piece in tet.geodesic_pieces:
|
207
|
+
|
208
|
+
num_pieces += 1
|
209
|
+
|
210
|
+
if piece.tet is not tet:
|
211
|
+
raise Exception("Piece.tet not pointing to tet.")
|
212
|
+
if piece.next_.prev is not piece:
|
213
|
+
raise Exception("Link list broken.")
|
214
|
+
if piece.prev.next_ is not piece:
|
215
|
+
raise Exception("Link list broken.")
|
216
|
+
|
217
|
+
if piece.index != piece.next_.index:
|
218
|
+
raise Exception("Index inconsistent.")
|
219
|
+
|
220
|
+
if piece.index != piece.prev.index:
|
221
|
+
raise Exception("Index inconsistent.")
|
222
|
+
|
223
|
+
if piece.index not in to_pieces_map:
|
224
|
+
l = flatten_link_list(piece)
|
225
|
+
for i, p in enumerate(l):
|
226
|
+
if p is piece:
|
227
|
+
l == l[i:] + l[:i]
|
228
|
+
break
|
229
|
+
else:
|
230
|
+
for i, p in enumerate(l):
|
231
|
+
if p.endpoints[0].subsimplex == simplex.T:
|
232
|
+
l == l[i:] + l[:i]
|
233
|
+
break
|
234
|
+
|
235
|
+
to_pieces_map[piece.index] = l
|
236
|
+
|
237
|
+
if False:
|
238
|
+
for i, pieces in sorted(to_pieces_map.items()):
|
239
|
+
print("Component %d (length %d):" % (i, len(pieces)))
|
240
|
+
output_linked(pieces[0], tets_set)
|
241
|
+
|
242
|
+
print("Total length: %d" % num_pieces)
|
@@ -0,0 +1,55 @@
|
|
1
|
+
class DrillGeodesicError(RuntimeError):
|
2
|
+
pass
|
3
|
+
|
4
|
+
class GeodesicSystemNotSimpleError(DrillGeodesicError):
|
5
|
+
def __init__(self, maximal_tube_radius):
|
6
|
+
self.maximal_tube_radius = maximal_tube_radius
|
7
|
+
super().__init__(
|
8
|
+
"One of the given geodesics might not simple or two of the "
|
9
|
+
"given geodesics might intersect. "
|
10
|
+
"The maximal tube radius about the given system of geodesics "
|
11
|
+
"was estimated to be: %r." % maximal_tube_radius)
|
12
|
+
|
13
|
+
class GeodesicMultipleOfCoreCurve(DrillGeodesicError):
|
14
|
+
def __init__(self, word, multiplicity):
|
15
|
+
self.word = word
|
16
|
+
self.multiplicity = multiplicity
|
17
|
+
super().__init__(
|
18
|
+
"The geodesic %s is a %d-fold multiple of a core curve." % (
|
19
|
+
word, multiplicity))
|
20
|
+
|
21
|
+
class UnfinishedTraceGeodesicError(DrillGeodesicError):
|
22
|
+
def __init__(self, steps):
|
23
|
+
self.steps = steps
|
24
|
+
super().__init__(
|
25
|
+
"The geodesic seems to have more than %d pieces in the "
|
26
|
+
"triangulation. This is probably due to a pathology, "
|
27
|
+
"e.g., the geodesic is very close to a core curve of "
|
28
|
+
"filled cusp." % steps)
|
29
|
+
|
30
|
+
class GeodesicHittingOneSkeletonError(DrillGeodesicError):
|
31
|
+
"""
|
32
|
+
Base class for exceptions caused by the geodesic hitting the
|
33
|
+
1-skeleton and that can be avoided by perturbing the geodesic.
|
34
|
+
"""
|
35
|
+
|
36
|
+
|
37
|
+
class GeodesicStartPointOnTwoSkeletonError(GeodesicHittingOneSkeletonError):
|
38
|
+
"""
|
39
|
+
Raised when the start point given to GeodesicStartPointInfo appears not to be in the
|
40
|
+
interior of a tetrahedron.
|
41
|
+
"""
|
42
|
+
|
43
|
+
|
44
|
+
class RayHittingOneSkeletonError(GeodesicHittingOneSkeletonError):
|
45
|
+
"""
|
46
|
+
Raised when the geodesic appears to intersect the 1-skeleton of the
|
47
|
+
original triangulation.
|
48
|
+
"""
|
49
|
+
|
50
|
+
|
51
|
+
class RetracingRayHittingOneSkeletonError(GeodesicHittingOneSkeletonError):
|
52
|
+
"""
|
53
|
+
Raised when the geodesic appears to intersect the 1-skeleton of the
|
54
|
+
subdivided triangulation.
|
55
|
+
"""
|