scitex 2.5.0__py3-none-any.whl → 2.7.3__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1179) hide show
  1. scitex/__init__.py +25 -10
  2. scitex/__main__.py +2 -1
  3. scitex/__version__.py +1 -1
  4. scitex/_optional_deps.py +13 -20
  5. scitex/ai/__init__.py +5 -0
  6. scitex/ai/_gen_ai/_Anthropic.py +3 -1
  7. scitex/ai/_gen_ai/_BaseGenAI.py +3 -2
  8. scitex/ai/_gen_ai/_DeepSeek.py +1 -1
  9. scitex/ai/_gen_ai/_Google.py +3 -2
  10. scitex/ai/_gen_ai/_Llama.py +4 -2
  11. scitex/ai/_gen_ai/_OpenAI.py +3 -1
  12. scitex/ai/_gen_ai/_PARAMS.py +1 -0
  13. scitex/ai/_gen_ai/_Perplexity.py +3 -1
  14. scitex/ai/_gen_ai/__init__.py +1 -0
  15. scitex/ai/_gen_ai/_format_output_func.py +3 -1
  16. scitex/ai/classification/CrossValidationExperiment.py +8 -14
  17. scitex/ai/classification/examples/timeseries_cv_demo.py +128 -112
  18. scitex/ai/classification/reporters/_BaseClassificationReporter.py +2 -0
  19. scitex/ai/classification/reporters/_ClassificationReporter.py +30 -45
  20. scitex/ai/classification/reporters/_MultiClassificationReporter.py +8 -11
  21. scitex/ai/classification/reporters/_SingleClassificationReporter.py +126 -182
  22. scitex/ai/classification/reporters/__init__.py +1 -1
  23. scitex/ai/classification/reporters/reporter_utils/_Plotter.py +213 -119
  24. scitex/ai/classification/reporters/reporter_utils/__init__.py +28 -36
  25. scitex/ai/classification/reporters/reporter_utils/aggregation.py +125 -143
  26. scitex/ai/classification/reporters/reporter_utils/data_models.py +128 -120
  27. scitex/ai/classification/reporters/reporter_utils/reporting.py +507 -340
  28. scitex/ai/classification/reporters/reporter_utils/storage.py +4 -1
  29. scitex/ai/classification/reporters/reporter_utils/validation.py +141 -154
  30. scitex/ai/classification/timeseries/_TimeSeriesBlockingSplit.py +204 -129
  31. scitex/ai/classification/timeseries/_TimeSeriesCalendarSplit.py +215 -171
  32. scitex/ai/classification/timeseries/_TimeSeriesMetadata.py +17 -17
  33. scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit.py +67 -143
  34. scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit_v01-not-using-n_splits.py +67 -143
  35. scitex/ai/classification/timeseries/_TimeSeriesStrategy.py +12 -13
  36. scitex/ai/classification/timeseries/_TimeSeriesStratifiedSplit.py +231 -144
  37. scitex/ai/classification/timeseries/__init__.py +2 -4
  38. scitex/ai/classification/timeseries/_normalize_timestamp.py +3 -0
  39. scitex/ai/clustering/_pca.py +0 -1
  40. scitex/ai/clustering/_umap.py +1 -2
  41. scitex/ai/feature_extraction/__init__.py +10 -8
  42. scitex/ai/feature_extraction/vit.py +0 -1
  43. scitex/ai/feature_selection/feature_selection.py +3 -8
  44. scitex/ai/metrics/_calc_conf_mat.py +2 -0
  45. scitex/ai/metrics/_calc_feature_importance.py +3 -7
  46. scitex/ai/metrics/_calc_pre_rec_auc.py +5 -5
  47. scitex/ai/metrics/_calc_roc_auc.py +4 -2
  48. scitex/ai/metrics/_calc_seizure_prediction_metrics.py +35 -20
  49. scitex/ai/metrics/_calc_silhouette_score.py +1 -3
  50. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger.py +0 -3
  51. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger2020.py +0 -3
  52. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger913A.py +0 -3
  53. scitex/ai/optim/_optimizers.py +1 -1
  54. scitex/ai/plt/__init__.py +6 -1
  55. scitex/ai/plt/_plot_feature_importance.py +1 -3
  56. scitex/ai/plt/_plot_learning_curve.py +9 -24
  57. scitex/ai/plt/_plot_optuna_study.py +4 -3
  58. scitex/ai/plt/_plot_pre_rec_curve.py +9 -15
  59. scitex/ai/plt/_plot_roc_curve.py +6 -8
  60. scitex/ai/plt/_stx_conf_mat.py +121 -122
  61. scitex/ai/sampling/undersample.py +3 -2
  62. scitex/ai/sklearn/__init__.py +2 -2
  63. scitex/ai/training/_LearningCurveLogger.py +23 -10
  64. scitex/ai/utils/_check_params.py +0 -1
  65. scitex/audio/README.md +52 -0
  66. scitex/audio/__init__.py +384 -0
  67. scitex/audio/__main__.py +129 -0
  68. scitex/audio/_tts.py +334 -0
  69. scitex/audio/engines/__init__.py +44 -0
  70. scitex/audio/engines/base.py +275 -0
  71. scitex/audio/engines/elevenlabs_engine.py +143 -0
  72. scitex/audio/engines/gtts_engine.py +162 -0
  73. scitex/audio/engines/pyttsx3_engine.py +131 -0
  74. scitex/audio/mcp_server.py +757 -0
  75. scitex/benchmark/__init__.py +15 -25
  76. scitex/benchmark/benchmark.py +124 -117
  77. scitex/benchmark/monitor.py +117 -107
  78. scitex/benchmark/profiler.py +61 -58
  79. scitex/bridge/__init__.py +110 -0
  80. scitex/bridge/_helpers.py +149 -0
  81. scitex/bridge/_plt_vis.py +529 -0
  82. scitex/bridge/_protocol.py +283 -0
  83. scitex/bridge/_stats_plt.py +261 -0
  84. scitex/bridge/_stats_vis.py +265 -0
  85. scitex/browser/__init__.py +0 -2
  86. scitex/browser/auth/__init__.py +0 -0
  87. scitex/browser/auth/google.py +16 -11
  88. scitex/browser/automation/CookieHandler.py +2 -3
  89. scitex/browser/collaboration/__init__.py +3 -0
  90. scitex/browser/collaboration/auth_helpers.py +3 -1
  91. scitex/browser/collaboration/collaborative_agent.py +2 -0
  92. scitex/browser/collaboration/interactive_panel.py +2 -2
  93. scitex/browser/collaboration/shared_session.py +20 -11
  94. scitex/browser/collaboration/standard_interactions.py +1 -0
  95. scitex/browser/core/BrowserMixin.py +12 -30
  96. scitex/browser/core/ChromeProfileManager.py +9 -24
  97. scitex/browser/debugging/_browser_logger.py +15 -25
  98. scitex/browser/debugging/_failure_capture.py +9 -2
  99. scitex/browser/debugging/_highlight_element.py +15 -6
  100. scitex/browser/debugging/_show_grid.py +5 -6
  101. scitex/browser/debugging/_sync_session.py +4 -3
  102. scitex/browser/debugging/_test_monitor.py +14 -5
  103. scitex/browser/debugging/_visual_cursor.py +46 -35
  104. scitex/browser/interaction/click_center.py +4 -3
  105. scitex/browser/interaction/click_with_fallbacks.py +7 -10
  106. scitex/browser/interaction/close_popups.py +79 -66
  107. scitex/browser/interaction/fill_with_fallbacks.py +8 -8
  108. scitex/browser/pdf/__init__.py +3 -1
  109. scitex/browser/pdf/click_download_for_chrome_pdf_viewer.py +11 -10
  110. scitex/browser/pdf/detect_chrome_pdf_viewer.py +3 -6
  111. scitex/browser/remote/CaptchaHandler.py +109 -96
  112. scitex/browser/remote/ZenRowsAPIClient.py +91 -97
  113. scitex/browser/remote/ZenRowsBrowserManager.py +138 -112
  114. scitex/browser/stealth/HumanBehavior.py +4 -9
  115. scitex/browser/stealth/StealthManager.py +11 -26
  116. scitex/capture/__init__.py +17 -17
  117. scitex/capture/__main__.py +2 -3
  118. scitex/capture/capture.py +23 -51
  119. scitex/capture/cli.py +14 -39
  120. scitex/capture/gif.py +5 -9
  121. scitex/capture/mcp_server.py +7 -20
  122. scitex/capture/session.py +4 -3
  123. scitex/capture/utils.py +18 -53
  124. scitex/cli/__init__.py +1 -1
  125. scitex/cli/cloud.py +158 -116
  126. scitex/cli/config.py +224 -0
  127. scitex/cli/main.py +41 -40
  128. scitex/cli/scholar.py +60 -27
  129. scitex/cli/security.py +14 -20
  130. scitex/cli/web.py +87 -90
  131. scitex/cli/writer.py +51 -45
  132. scitex/cloud/__init__.py +14 -11
  133. scitex/cloud/_matplotlib_hook.py +6 -6
  134. scitex/config/README.md +313 -0
  135. scitex/config/{PriorityConfig.py → _PriorityConfig.py} +114 -17
  136. scitex/config/_ScitexConfig.py +319 -0
  137. scitex/config/__init__.py +41 -9
  138. scitex/config/_paths.py +325 -0
  139. scitex/config/default.yaml +81 -0
  140. scitex/context/_suppress_output.py +2 -3
  141. scitex/db/_BaseMixins/_BaseBackupMixin.py +3 -1
  142. scitex/db/_BaseMixins/_BaseBatchMixin.py +3 -1
  143. scitex/db/_BaseMixins/_BaseBlobMixin.py +3 -1
  144. scitex/db/_BaseMixins/_BaseImportExportMixin.py +1 -3
  145. scitex/db/_BaseMixins/_BaseIndexMixin.py +3 -1
  146. scitex/db/_BaseMixins/_BaseMaintenanceMixin.py +1 -3
  147. scitex/db/_BaseMixins/_BaseQueryMixin.py +3 -1
  148. scitex/db/_BaseMixins/_BaseRowMixin.py +3 -1
  149. scitex/db/_BaseMixins/_BaseTableMixin.py +3 -1
  150. scitex/db/_BaseMixins/_BaseTransactionMixin.py +1 -3
  151. scitex/db/_BaseMixins/__init__.py +1 -1
  152. scitex/db/__init__.py +9 -1
  153. scitex/db/__main__.py +8 -21
  154. scitex/db/_check_health.py +15 -31
  155. scitex/db/_delete_duplicates.py +7 -4
  156. scitex/db/_inspect.py +22 -38
  157. scitex/db/_inspect_optimized.py +89 -85
  158. scitex/db/_postgresql/_PostgreSQL.py +0 -1
  159. scitex/db/_postgresql/_PostgreSQLMixins/_BlobMixin.py +3 -1
  160. scitex/db/_postgresql/_PostgreSQLMixins/_ConnectionMixin.py +1 -3
  161. scitex/db/_postgresql/_PostgreSQLMixins/_ImportExportMixin.py +1 -3
  162. scitex/db/_postgresql/_PostgreSQLMixins/_MaintenanceMixin.py +1 -4
  163. scitex/db/_postgresql/_PostgreSQLMixins/_QueryMixin.py +3 -3
  164. scitex/db/_postgresql/_PostgreSQLMixins/_RowMixin.py +3 -1
  165. scitex/db/_postgresql/_PostgreSQLMixins/_TransactionMixin.py +1 -3
  166. scitex/db/_postgresql/__init__.py +1 -1
  167. scitex/db/_sqlite3/_SQLite3.py +2 -4
  168. scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin.py +11 -12
  169. scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin_v01-need-_hash-col.py +19 -14
  170. scitex/db/_sqlite3/_SQLite3Mixins/_BatchMixin.py +3 -1
  171. scitex/db/_sqlite3/_SQLite3Mixins/_BlobMixin.py +7 -7
  172. scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin.py +118 -111
  173. scitex/db/_sqlite3/_SQLite3Mixins/_ConnectionMixin.py +8 -10
  174. scitex/db/_sqlite3/_SQLite3Mixins/_GitMixin.py +17 -45
  175. scitex/db/_sqlite3/_SQLite3Mixins/_ImportExportMixin.py +1 -3
  176. scitex/db/_sqlite3/_SQLite3Mixins/_IndexMixin.py +3 -1
  177. scitex/db/_sqlite3/_SQLite3Mixins/_QueryMixin.py +3 -4
  178. scitex/db/_sqlite3/_SQLite3Mixins/_RowMixin.py +9 -9
  179. scitex/db/_sqlite3/_SQLite3Mixins/_TableMixin.py +18 -11
  180. scitex/db/_sqlite3/_SQLite3Mixins/__init__.py +1 -0
  181. scitex/db/_sqlite3/__init__.py +1 -1
  182. scitex/db/_sqlite3/_delete_duplicates.py +13 -11
  183. scitex/decorators/__init__.py +29 -4
  184. scitex/decorators/_auto_order.py +43 -43
  185. scitex/decorators/_batch_fn.py +12 -6
  186. scitex/decorators/_cache_disk.py +8 -9
  187. scitex/decorators/_cache_disk_async.py +8 -7
  188. scitex/decorators/_combined.py +19 -13
  189. scitex/decorators/_converters.py +16 -3
  190. scitex/decorators/_deprecated.py +32 -22
  191. scitex/decorators/_numpy_fn.py +18 -4
  192. scitex/decorators/_pandas_fn.py +17 -5
  193. scitex/decorators/_signal_fn.py +17 -3
  194. scitex/decorators/_torch_fn.py +32 -15
  195. scitex/decorators/_xarray_fn.py +23 -9
  196. scitex/dev/_analyze_code_flow.py +0 -2
  197. scitex/dev/plt/__init__.py +272 -0
  198. scitex/dev/plt/plot_mpl_axhline.py +28 -0
  199. scitex/dev/plt/plot_mpl_axhspan.py +28 -0
  200. scitex/dev/plt/plot_mpl_axvline.py +28 -0
  201. scitex/dev/plt/plot_mpl_axvspan.py +28 -0
  202. scitex/dev/plt/plot_mpl_bar.py +29 -0
  203. scitex/dev/plt/plot_mpl_barh.py +29 -0
  204. scitex/dev/plt/plot_mpl_boxplot.py +28 -0
  205. scitex/dev/plt/plot_mpl_contour.py +31 -0
  206. scitex/dev/plt/plot_mpl_contourf.py +31 -0
  207. scitex/dev/plt/plot_mpl_errorbar.py +30 -0
  208. scitex/dev/plt/plot_mpl_eventplot.py +28 -0
  209. scitex/dev/plt/plot_mpl_fill.py +30 -0
  210. scitex/dev/plt/plot_mpl_fill_between.py +31 -0
  211. scitex/dev/plt/plot_mpl_hexbin.py +28 -0
  212. scitex/dev/plt/plot_mpl_hist.py +28 -0
  213. scitex/dev/plt/plot_mpl_hist2d.py +28 -0
  214. scitex/dev/plt/plot_mpl_imshow.py +29 -0
  215. scitex/dev/plt/plot_mpl_pcolormesh.py +31 -0
  216. scitex/dev/plt/plot_mpl_pie.py +29 -0
  217. scitex/dev/plt/plot_mpl_plot.py +29 -0
  218. scitex/dev/plt/plot_mpl_quiver.py +31 -0
  219. scitex/dev/plt/plot_mpl_scatter.py +28 -0
  220. scitex/dev/plt/plot_mpl_stackplot.py +31 -0
  221. scitex/dev/plt/plot_mpl_stem.py +29 -0
  222. scitex/dev/plt/plot_mpl_step.py +29 -0
  223. scitex/dev/plt/plot_mpl_violinplot.py +28 -0
  224. scitex/dev/plt/plot_sns_barplot.py +29 -0
  225. scitex/dev/plt/plot_sns_boxplot.py +29 -0
  226. scitex/dev/plt/plot_sns_heatmap.py +28 -0
  227. scitex/dev/plt/plot_sns_histplot.py +29 -0
  228. scitex/dev/plt/plot_sns_kdeplot.py +29 -0
  229. scitex/dev/plt/plot_sns_lineplot.py +31 -0
  230. scitex/dev/plt/plot_sns_scatterplot.py +29 -0
  231. scitex/dev/plt/plot_sns_stripplot.py +29 -0
  232. scitex/dev/plt/plot_sns_swarmplot.py +29 -0
  233. scitex/dev/plt/plot_sns_violinplot.py +29 -0
  234. scitex/dev/plt/plot_stx_bar.py +29 -0
  235. scitex/dev/plt/plot_stx_barh.py +29 -0
  236. scitex/dev/plt/plot_stx_box.py +28 -0
  237. scitex/dev/plt/plot_stx_boxplot.py +28 -0
  238. scitex/dev/plt/plot_stx_conf_mat.py +28 -0
  239. scitex/dev/plt/plot_stx_contour.py +31 -0
  240. scitex/dev/plt/plot_stx_ecdf.py +28 -0
  241. scitex/dev/plt/plot_stx_errorbar.py +30 -0
  242. scitex/dev/plt/plot_stx_fill_between.py +31 -0
  243. scitex/dev/plt/plot_stx_fillv.py +28 -0
  244. scitex/dev/plt/plot_stx_heatmap.py +28 -0
  245. scitex/dev/plt/plot_stx_image.py +28 -0
  246. scitex/dev/plt/plot_stx_imshow.py +28 -0
  247. scitex/dev/plt/plot_stx_joyplot.py +28 -0
  248. scitex/dev/plt/plot_stx_kde.py +28 -0
  249. scitex/dev/plt/plot_stx_line.py +28 -0
  250. scitex/dev/plt/plot_stx_mean_ci.py +28 -0
  251. scitex/dev/plt/plot_stx_mean_std.py +28 -0
  252. scitex/dev/plt/plot_stx_median_iqr.py +28 -0
  253. scitex/dev/plt/plot_stx_raster.py +28 -0
  254. scitex/dev/plt/plot_stx_rectangle.py +28 -0
  255. scitex/dev/plt/plot_stx_scatter.py +29 -0
  256. scitex/dev/plt/plot_stx_shaded_line.py +29 -0
  257. scitex/dev/plt/plot_stx_violin.py +28 -0
  258. scitex/dev/plt/plot_stx_violinplot.py +28 -0
  259. scitex/dict/_DotDict.py +15 -19
  260. scitex/dict/_flatten.py +1 -0
  261. scitex/dict/_listed_dict.py +1 -0
  262. scitex/dict/_pop_keys.py +1 -0
  263. scitex/dict/_replace.py +1 -0
  264. scitex/dict/_safe_merge.py +1 -0
  265. scitex/dict/_to_str.py +2 -3
  266. scitex/dsp/__init__.py +13 -4
  267. scitex/dsp/_crop.py +3 -1
  268. scitex/dsp/_detect_ripples.py +3 -1
  269. scitex/dsp/_modulation_index.py +3 -1
  270. scitex/dsp/_time.py +3 -1
  271. scitex/dsp/_wavelet.py +0 -1
  272. scitex/dsp/example.py +0 -5
  273. scitex/dsp/filt.py +4 -0
  274. scitex/dsp/utils/__init__.py +4 -1
  275. scitex/dsp/utils/pac.py +3 -3
  276. scitex/dt/_normalize_timestamp.py +4 -1
  277. scitex/errors.py +3 -6
  278. scitex/etc/__init__.py +1 -1
  279. scitex/fig/__init__.py +352 -0
  280. scitex/{vis → fig}/backend/__init__.py +3 -3
  281. scitex/{vis/backend/export.py → fig/backend/_export.py} +1 -1
  282. scitex/{vis/backend/parser.py → fig/backend/_parser.py} +2 -4
  283. scitex/{vis/backend/render.py → fig/backend/_render.py} +1 -1
  284. scitex/{vis → fig}/canvas.py +16 -4
  285. scitex/{vis → fig}/editor/__init__.py +0 -0
  286. scitex/{vis → fig}/editor/_dearpygui_editor.py +450 -304
  287. scitex/fig/editor/_defaults.py +300 -0
  288. scitex/fig/editor/_edit.py +751 -0
  289. scitex/{vis → fig}/editor/_flask_editor.py +8 -8
  290. scitex/{vis → fig}/editor/_mpl_editor.py +63 -48
  291. scitex/{vis → fig}/editor/_qt_editor.py +391 -160
  292. scitex/{vis → fig}/editor/_tkinter_editor.py +146 -89
  293. scitex/fig/editor/flask_editor/__init__.py +21 -0
  294. scitex/fig/editor/flask_editor/_bbox.py +1276 -0
  295. scitex/fig/editor/flask_editor/_core.py +624 -0
  296. scitex/fig/editor/flask_editor/_plotter.py +601 -0
  297. scitex/fig/editor/flask_editor/_renderer.py +739 -0
  298. scitex/{vis/editor/flask_editor/utils.py → fig/editor/flask_editor/_utils.py} +13 -14
  299. scitex/{vis → fig}/editor/flask_editor/templates/__init__.py +6 -6
  300. scitex/fig/editor/flask_editor/templates/_html.py +834 -0
  301. scitex/fig/editor/flask_editor/templates/_scripts.py +3136 -0
  302. scitex/fig/editor/flask_editor/templates/_styles.py +1346 -0
  303. scitex/{vis → fig}/io/__init__.py +18 -6
  304. scitex/fig/io/_bundle.py +973 -0
  305. scitex/{vis/io/canvas.py → fig/io/_canvas.py} +9 -5
  306. scitex/{vis/io/data.py → fig/io/_data.py} +14 -10
  307. scitex/{vis/io/directory.py → fig/io/_directory.py} +7 -4
  308. scitex/{vis/io/export.py → fig/io/_export.py} +16 -13
  309. scitex/{vis/io/load.py → fig/io/_load.py} +2 -2
  310. scitex/{vis/io/panel.py → fig/io/_panel.py} +22 -14
  311. scitex/{vis/io/save.py → fig/io/_save.py} +1 -1
  312. scitex/{vis → fig}/model/__init__.py +8 -8
  313. scitex/{vis/model/annotations.py → fig/model/_annotations.py} +3 -5
  314. scitex/{vis/model/axes.py → fig/model/_axes.py} +2 -2
  315. scitex/{vis/model/figure.py → fig/model/_figure.py} +1 -1
  316. scitex/{vis/model/guides.py → fig/model/_guides.py} +2 -2
  317. scitex/{vis/model/plot.py → fig/model/_plot.py} +3 -5
  318. scitex/{vis/model/plot_types.py → fig/model/_plot_types.py} +0 -0
  319. scitex/{vis/model/styles.py → fig/model/_styles.py} +1 -1
  320. scitex/{vis → fig}/utils/__init__.py +3 -3
  321. scitex/{vis/utils/defaults.py → fig/utils/_defaults.py} +1 -2
  322. scitex/{vis/utils/validate.py → fig/utils/_validate.py} +3 -9
  323. scitex/gen/_DimHandler.py +6 -6
  324. scitex/gen/__init__.py +5 -1
  325. scitex/gen/_deprecated_close.py +1 -0
  326. scitex/gen/_deprecated_start.py +5 -3
  327. scitex/gen/_detect_environment.py +44 -41
  328. scitex/gen/_detect_notebook_path.py +51 -47
  329. scitex/gen/_embed.py +1 -1
  330. scitex/gen/_get_notebook_path.py +81 -62
  331. scitex/gen/_inspect_module.py +0 -1
  332. scitex/gen/_norm.py +16 -7
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  334. scitex/gen/_print_config.py +0 -3
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  928. scitex/scholar/url_finder/translators/individual/caod.py +50 -46
  929. scitex/scholar/url_finder/translators/individual/cbc.py +91 -67
  930. scitex/scholar/url_finder/translators/individual/ccfr_bnf.py +49 -53
  931. scitex/scholar/url_finder/translators/individual/cia_world_factbook.py +43 -33
  932. scitex/scholar/url_finder/translators/individual/crossref_rest.py +208 -174
  933. scitex/scholar/url_finder/translators/individual/current_affairs.py +29 -35
  934. scitex/scholar/url_finder/translators/individual/dabi.py +70 -66
  935. scitex/scholar/url_finder/translators/individual/dagens_nyheter.py +3 -1
  936. scitex/scholar/url_finder/translators/individual/dagstuhl.py +10 -15
  937. scitex/scholar/url_finder/translators/individual/dar_almandumah.py +13 -9
  938. scitex/scholar/url_finder/translators/individual/dart_europe.py +19 -22
  939. scitex/scholar/url_finder/translators/individual/data_gov.py +2 -2
  940. scitex/scholar/url_finder/translators/individual/databrary.py +27 -28
  941. scitex/scholar/url_finder/translators/individual/datacite_json.py +152 -137
  942. scitex/scholar/url_finder/translators/individual/dataverse.py +68 -64
  943. scitex/scholar/url_finder/translators/individual/daum_news.py +38 -38
  944. scitex/scholar/url_finder/translators/individual/dblp.py +4 -8
  945. scitex/scholar/url_finder/translators/individual/dblp_computer_science_bibliography.py +8 -3
  946. scitex/scholar/url_finder/translators/individual/dbpia.py +5 -3
  947. scitex/scholar/url_finder/translators/individual/defense_technical_information_center.py +30 -28
  948. scitex/scholar/url_finder/translators/individual/delpher.py +102 -79
  949. scitex/scholar/url_finder/translators/individual/demographic_research.py +35 -31
  950. scitex/scholar/url_finder/translators/individual/denik_cz.py +58 -54
  951. scitex/scholar/url_finder/translators/individual/depatisnet.py +7 -10
  952. scitex/scholar/url_finder/translators/individual/der_freitag.py +81 -66
  953. scitex/scholar/url_finder/translators/individual/der_spiegel.py +56 -54
  954. scitex/scholar/url_finder/translators/individual/digibib_net.py +3 -1
  955. scitex/scholar/url_finder/translators/individual/digizeitschriften.py +3 -1
  956. scitex/scholar/url_finder/translators/individual/dpla.py +13 -14
  957. scitex/scholar/url_finder/translators/individual/dspace.py +2 -2
  958. scitex/scholar/url_finder/translators/individual/ebrary.py +3 -1
  959. scitex/scholar/url_finder/translators/individual/ebscohost.py +3 -1
  960. scitex/scholar/url_finder/translators/individual/electronic_colloquium_on_computational_complexity.py +3 -1
  961. scitex/scholar/url_finder/translators/individual/elife.py +3 -1
  962. scitex/scholar/url_finder/translators/individual/elsevier_health_journals.py +3 -1
  963. scitex/scholar/url_finder/translators/individual/emerald.py +3 -1
  964. scitex/scholar/url_finder/translators/individual/emerald_insight.py +3 -1
  965. scitex/scholar/url_finder/translators/individual/epicurious.py +3 -1
  966. scitex/scholar/url_finder/translators/individual/eurogamerusgamer.py +3 -1
  967. scitex/scholar/url_finder/translators/individual/fachportal_padagogik.py +3 -1
  968. scitex/scholar/url_finder/translators/individual/frontiers.py +1 -1
  969. scitex/scholar/url_finder/translators/individual/gale_databases.py +3 -1
  970. scitex/scholar/url_finder/translators/individual/gms_german_medical_science.py +6 -2
  971. scitex/scholar/url_finder/translators/individual/ieee_computer_society.py +6 -2
  972. scitex/scholar/url_finder/translators/individual/ieee_xplore.py +41 -35
  973. scitex/scholar/url_finder/translators/individual/inter_research_science_center.py +6 -2
  974. scitex/scholar/url_finder/translators/individual/jisc_historical_texts.py +3 -1
  975. scitex/scholar/url_finder/translators/individual/jstor.py +14 -12
  976. scitex/scholar/url_finder/translators/individual/korean_national_library.py +3 -1
  977. scitex/scholar/url_finder/translators/individual/la_times.py +3 -1
  978. scitex/scholar/url_finder/translators/individual/landesbibliographie_baden_wurttemberg.py +3 -1
  979. scitex/scholar/url_finder/translators/individual/legislative_insight.py +3 -1
  980. scitex/scholar/url_finder/translators/individual/libraries_tasmania.py +3 -1
  981. scitex/scholar/url_finder/translators/individual/library_catalog__koha_.py +3 -1
  982. scitex/scholar/url_finder/translators/individual/lingbuzz.py +2 -2
  983. scitex/scholar/url_finder/translators/individual/max_planck_institute_for_the_history_of_science_virtual_laboratory_library.py +3 -1
  984. scitex/scholar/url_finder/translators/individual/mdpi.py +12 -6
  985. scitex/scholar/url_finder/translators/individual/microbiology_society_journals.py +3 -1
  986. scitex/scholar/url_finder/translators/individual/midas_journals.py +3 -1
  987. scitex/scholar/url_finder/translators/individual/nagoya_university_opac.py +3 -1
  988. scitex/scholar/url_finder/translators/individual/nature_publishing_group.py +32 -19
  989. scitex/scholar/url_finder/translators/individual/ntsb_accident_reports.py +3 -1
  990. scitex/scholar/url_finder/translators/individual/openedition_journals.py +8 -4
  991. scitex/scholar/url_finder/translators/individual/orcid.py +16 -15
  992. scitex/scholar/url_finder/translators/individual/oxford.py +25 -19
  993. scitex/scholar/url_finder/translators/individual/oxford_dictionaries_premium.py +3 -1
  994. scitex/scholar/url_finder/translators/individual/ozon_ru.py +3 -1
  995. scitex/scholar/url_finder/translators/individual/plos.py +9 -12
  996. scitex/scholar/url_finder/translators/individual/polygon.py +3 -1
  997. scitex/scholar/url_finder/translators/individual/primo.py +3 -1
  998. scitex/scholar/url_finder/translators/individual/project_muse.py +3 -1
  999. scitex/scholar/url_finder/translators/individual/pubfactory_journals.py +3 -1
  1000. scitex/scholar/url_finder/translators/individual/pubmed.py +71 -65
  1001. scitex/scholar/url_finder/translators/individual/pubmed_central.py +8 -6
  1002. scitex/scholar/url_finder/translators/individual/rechtspraak_nl.py +3 -1
  1003. scitex/scholar/url_finder/translators/individual/sage_journals.py +25 -17
  1004. scitex/scholar/url_finder/translators/individual/sciencedirect.py +36 -17
  1005. scitex/scholar/url_finder/translators/individual/semantics_visual_library.py +3 -1
  1006. scitex/scholar/url_finder/translators/individual/silverchair.py +70 -52
  1007. scitex/scholar/url_finder/translators/individual/sora.py +3 -1
  1008. scitex/scholar/url_finder/translators/individual/springer.py +15 -11
  1009. scitex/scholar/url_finder/translators/individual/ssrn.py +3 -3
  1010. scitex/scholar/url_finder/translators/individual/stanford_encyclopedia_of_philosophy.py +3 -1
  1011. scitex/scholar/url_finder/translators/individual/superlib.py +3 -1
  1012. scitex/scholar/url_finder/translators/individual/treesearch.py +3 -1
  1013. scitex/scholar/url_finder/translators/individual/university_of_chicago_press_books.py +3 -1
  1014. scitex/scholar/url_finder/translators/individual/vlex.py +3 -1
  1015. scitex/scholar/url_finder/translators/individual/web_of_science.py +3 -1
  1016. scitex/scholar/url_finder/translators/individual/web_of_science_nextgen.py +3 -1
  1017. scitex/scholar/url_finder/translators/individual/wiley.py +31 -25
  1018. scitex/scholar/url_finder/translators/individual/wilson_center_digital_archive.py +3 -1
  1019. scitex/scholar/utils/bibtex/_parse_bibtex.py +3 -3
  1020. scitex/scholar/utils/cleanup/_cleanup_scholar_processes.py +5 -9
  1021. scitex/scholar/utils/text/_TextNormalizer.py +249 -176
  1022. scitex/scholar/utils/validation/DOIValidator.py +31 -28
  1023. scitex/scholar/utils/validation/__init__.py +0 -0
  1024. scitex/scholar/utils/validation/validate_library_dois.py +61 -57
  1025. scitex/scholar/zotero/__init__.py +1 -1
  1026. scitex/security/cli.py +7 -20
  1027. scitex/security/github.py +45 -32
  1028. scitex/session/__init__.py +8 -9
  1029. scitex/session/_decorator.py +49 -42
  1030. scitex/session/_lifecycle.py +39 -39
  1031. scitex/session/_manager.py +24 -20
  1032. scitex/sh/__init__.py +4 -3
  1033. scitex/sh/_execute.py +10 -7
  1034. scitex/sh/_security.py +3 -3
  1035. scitex/sh/_types.py +2 -3
  1036. scitex/stats/__init__.py +174 -6
  1037. scitex/stats/_schema.py +42 -569
  1038. scitex/stats/auto/__init__.py +188 -0
  1039. scitex/stats/auto/_context.py +331 -0
  1040. scitex/stats/auto/_formatting.py +679 -0
  1041. scitex/stats/auto/_rules.py +901 -0
  1042. scitex/stats/auto/_selector.py +554 -0
  1043. scitex/stats/auto/_styles.py +721 -0
  1044. scitex/stats/correct/__init__.py +4 -4
  1045. scitex/stats/correct/_correct_bonferroni.py +43 -34
  1046. scitex/stats/correct/_correct_fdr.py +14 -40
  1047. scitex/stats/correct/_correct_fdr_.py +39 -46
  1048. scitex/stats/correct/_correct_holm.py +14 -32
  1049. scitex/stats/correct/_correct_sidak.py +36 -21
  1050. scitex/stats/descriptive/_circular.py +20 -21
  1051. scitex/stats/descriptive/_describe.py +19 -5
  1052. scitex/stats/descriptive/_nan.py +5 -7
  1053. scitex/stats/descriptive/_real.py +4 -3
  1054. scitex/stats/effect_sizes/__init__.py +10 -11
  1055. scitex/stats/effect_sizes/_cliffs_delta.py +35 -32
  1056. scitex/stats/effect_sizes/_cohens_d.py +30 -31
  1057. scitex/stats/effect_sizes/_epsilon_squared.py +19 -22
  1058. scitex/stats/effect_sizes/_eta_squared.py +23 -27
  1059. scitex/stats/effect_sizes/_prob_superiority.py +18 -21
  1060. scitex/stats/io/__init__.py +29 -0
  1061. scitex/stats/io/_bundle.py +156 -0
  1062. scitex/stats/posthoc/__init__.py +3 -3
  1063. scitex/stats/posthoc/_dunnett.py +75 -55
  1064. scitex/stats/posthoc/_games_howell.py +61 -43
  1065. scitex/stats/posthoc/_tukey_hsd.py +42 -34
  1066. scitex/stats/power/__init__.py +2 -2
  1067. scitex/stats/power/_power.py +56 -56
  1068. scitex/stats/tests/__init__.py +1 -1
  1069. scitex/stats/tests/correlation/__init__.py +1 -1
  1070. scitex/stats/tests/correlation/_test_pearson.py +28 -38
  1071. scitex/stats/utils/__init__.py +14 -17
  1072. scitex/stats/utils/_effect_size.py +85 -78
  1073. scitex/stats/utils/_formatters.py +49 -43
  1074. scitex/stats/utils/_normalizers.py +7 -14
  1075. scitex/stats/utils/_power.py +56 -56
  1076. scitex/str/__init__.py +1 -0
  1077. scitex/str/_clean_path.py +3 -3
  1078. scitex/str/_factor_out_digits.py +86 -58
  1079. scitex/str/_format_plot_text.py +180 -111
  1080. scitex/str/_latex.py +19 -19
  1081. scitex/str/_latex_fallback.py +9 -10
  1082. scitex/str/_parse.py +3 -6
  1083. scitex/str/_print_debug.py +13 -13
  1084. scitex/str/_printc.py +2 -0
  1085. scitex/str/_search.py +3 -3
  1086. scitex/template/.legacy/_clone_project.py +9 -13
  1087. scitex/template/__init__.py +10 -2
  1088. scitex/template/_clone_project.py +7 -2
  1089. scitex/template/_copy.py +1 -0
  1090. scitex/template/_customize.py +3 -6
  1091. scitex/template/_git_strategy.py +2 -3
  1092. scitex/template/_rename.py +1 -0
  1093. scitex/template/clone_pip_project.py +6 -7
  1094. scitex/template/clone_research.py +7 -10
  1095. scitex/template/clone_singularity.py +6 -7
  1096. scitex/template/clone_writer_directory.py +6 -7
  1097. scitex/tex/__init__.py +4 -0
  1098. scitex/tex/_export.py +890 -0
  1099. scitex/tex/_preview.py +26 -11
  1100. scitex/tex/_to_vec.py +10 -7
  1101. scitex/torch/__init__.py +11 -1
  1102. scitex/types/_ArrayLike.py +2 -0
  1103. scitex/types/_is_listed_X.py +3 -3
  1104. scitex/units.py +110 -77
  1105. scitex/utils/_compress_hdf5.py +3 -3
  1106. scitex/utils/_email.py +8 -4
  1107. scitex/utils/_notify.py +14 -8
  1108. scitex/utils/_search.py +6 -6
  1109. scitex/utils/_verify_scitex_format.py +17 -42
  1110. scitex/utils/_verify_scitex_format_v01.py +12 -34
  1111. scitex/utils/template.py +4 -3
  1112. scitex/web/__init__.py +7 -1
  1113. scitex/web/_scraping.py +54 -38
  1114. scitex/web/_search_pubmed.py +30 -14
  1115. scitex/writer/.legacy/Writer_v01-refactored.py +4 -4
  1116. scitex/writer/.legacy/_compile.py +18 -28
  1117. scitex/writer/Writer.py +8 -21
  1118. scitex/writer/__init__.py +11 -11
  1119. scitex/writer/_clone_writer_project.py +2 -6
  1120. scitex/writer/_compile/__init__.py +1 -0
  1121. scitex/writer/_compile/_parser.py +1 -0
  1122. scitex/writer/_compile/_runner.py +35 -38
  1123. scitex/writer/_compile/_validator.py +1 -0
  1124. scitex/writer/_compile/manuscript.py +1 -0
  1125. scitex/writer/_compile/revision.py +1 -0
  1126. scitex/writer/_compile/supplementary.py +1 -0
  1127. scitex/writer/_compile_async.py +5 -12
  1128. scitex/writer/_project/__init__.py +1 -0
  1129. scitex/writer/_project/_create.py +10 -25
  1130. scitex/writer/_project/_trees.py +4 -9
  1131. scitex/writer/_project/_validate.py +2 -3
  1132. scitex/writer/_validate_tree_structures.py +7 -18
  1133. scitex/writer/dataclasses/__init__.py +8 -10
  1134. scitex/writer/dataclasses/config/_CONSTANTS.py +2 -3
  1135. scitex/writer/dataclasses/config/_WriterConfig.py +4 -9
  1136. scitex/writer/dataclasses/contents/_ManuscriptContents.py +14 -25
  1137. scitex/writer/dataclasses/contents/_RevisionContents.py +21 -16
  1138. scitex/writer/dataclasses/contents/_SupplementaryContents.py +21 -24
  1139. scitex/writer/dataclasses/core/_Document.py +2 -3
  1140. scitex/writer/dataclasses/core/_DocumentSection.py +8 -23
  1141. scitex/writer/dataclasses/results/_CompilationResult.py +2 -3
  1142. scitex/writer/dataclasses/results/_LaTeXIssue.py +3 -6
  1143. scitex/writer/dataclasses/results/_SaveSectionsResponse.py +20 -9
  1144. scitex/writer/dataclasses/results/_SectionReadResponse.py +24 -10
  1145. scitex/writer/dataclasses/tree/_ConfigTree.py +7 -4
  1146. scitex/writer/dataclasses/tree/_ManuscriptTree.py +10 -13
  1147. scitex/writer/dataclasses/tree/_RevisionTree.py +16 -17
  1148. scitex/writer/dataclasses/tree/_ScriptsTree.py +10 -5
  1149. scitex/writer/dataclasses/tree/_SharedTree.py +10 -13
  1150. scitex/writer/dataclasses/tree/_SupplementaryTree.py +15 -14
  1151. scitex/writer/utils/.legacy_git_retry.py +3 -8
  1152. scitex/writer/utils/_parse_latex_logs.py +2 -3
  1153. scitex/writer/utils/_parse_script_args.py +20 -23
  1154. scitex/writer/utils/_watch.py +5 -5
  1155. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/METADATA +14 -10
  1156. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/RECORD +1149 -985
  1157. scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin_v01-indentation-issues.py +0 -583
  1158. scitex/io/memo.md +0 -2827
  1159. scitex/plt/_subplots/TODO.md +0 -53
  1160. scitex/plt/_subplots/_AxisWrapperMixins/_AdjustmentMixin.py +0 -537
  1161. scitex/plt/_subplots/_AxisWrapperMixins/_MatplotlibPlotMixin.py +0 -1499
  1162. scitex/plt/_subplots/_AxisWrapperMixins/_SeabornMixin.py +0 -431
  1163. scitex/plt/_subplots/_export_as_csv_formatters.py +0 -112
  1164. scitex/vis/__init__.py +0 -177
  1165. scitex/vis/editor/_defaults.py +0 -244
  1166. scitex/vis/editor/_edit.py +0 -378
  1167. scitex/vis/editor/flask_editor/__init__.py +0 -21
  1168. scitex/vis/editor/flask_editor/bbox.py +0 -216
  1169. scitex/vis/editor/flask_editor/core.py +0 -152
  1170. scitex/vis/editor/flask_editor/plotter.py +0 -130
  1171. scitex/vis/editor/flask_editor/renderer.py +0 -184
  1172. scitex/vis/editor/flask_editor/templates/html.py +0 -295
  1173. scitex/vis/editor/flask_editor/templates/scripts.py +0 -614
  1174. scitex/vis/editor/flask_editor/templates/styles.py +0 -549
  1175. /scitex/{vis → fig}/README.md +0 -0
  1176. /scitex/{vis → fig}/docs/CANVAS_ARCHITECTURE.md +0 -0
  1177. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/WHEEL +0 -0
  1178. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/entry_points.txt +0 -0
  1179. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/licenses/LICENSE +0 -0
@@ -33,19 +33,19 @@ class CentralAndEasternEuropeanOnlineLibraryJournalsTranslator:
33
33
  "inRepository": True,
34
34
  "translatorType": 4,
35
35
  "browserSupport": "gcsibv",
36
- "lastUpdated": "2021-09-22 20:12:37"
36
+ "lastUpdated": "2021-09-22 20:12:37",
37
37
  }
38
38
 
39
39
  def detect_web(self, doc: BeautifulSoup, url: str) -> str:
40
40
  """Detect if page is an article or search results."""
41
- if '/article-detail?' in url:
42
- return 'journalArticle'
41
+ if "/article-detail?" in url:
42
+ return "journalArticle"
43
43
 
44
44
  # Check for search results
45
- if doc.select('.description a, .article-details > h3 > a'):
46
- return 'multiple'
45
+ if doc.select(".description a, .article-details > h3 > a"):
46
+ return "multiple"
47
47
 
48
- return ''
48
+ return ""
49
49
 
50
50
  def do_web(self, doc: BeautifulSoup, url: str) -> Dict[str, Any]:
51
51
  """Extract article data using embedded metadata."""
@@ -53,120 +53,120 @@ class CentralAndEasternEuropeanOnlineLibraryJournalsTranslator:
53
53
  self._post_process(doc, item)
54
54
  return item
55
55
 
56
- def _extract_embedded_metadata(self, doc: BeautifulSoup, url: str) -> Dict[str, Any]:
56
+ def _extract_embedded_metadata(
57
+ self, doc: BeautifulSoup, url: str
58
+ ) -> Dict[str, Any]:
57
59
  """Extract metadata from meta tags."""
58
60
  item = {
59
- 'itemType': 'journalArticle',
60
- 'creators': [],
61
- 'tags': [],
62
- 'attachments': [],
63
- 'url': url
61
+ "itemType": "journalArticle",
62
+ "creators": [],
63
+ "tags": [],
64
+ "attachments": [],
65
+ "url": url,
64
66
  }
65
67
 
66
68
  # Title
67
- title_meta = doc.find('meta', attrs={'name': 'citation_title'})
69
+ title_meta = doc.find("meta", attrs={"name": "citation_title"})
68
70
  if title_meta:
69
- item['title'] = title_meta.get('content', '')
71
+ item["title"] = title_meta.get("content", "")
70
72
 
71
73
  # Authors
72
- author_metas = doc.find_all('meta', attrs={'name': 'citation_author'})
74
+ author_metas = doc.find_all("meta", attrs={"name": "citation_author"})
73
75
  for author_meta in author_metas:
74
- author_name = author_meta.get('content', '')
76
+ author_name = author_meta.get("content", "")
75
77
  if author_name:
76
- item['creators'].append(self._clean_author(author_name))
78
+ item["creators"].append(self._clean_author(author_name))
77
79
 
78
80
  # Publication title
79
- journal_meta = doc.find('meta', attrs={'name': 'citation_journal_title'})
81
+ journal_meta = doc.find("meta", attrs={"name": "citation_journal_title"})
80
82
  if journal_meta:
81
- item['publicationTitle'] = journal_meta.get('content', '')
83
+ item["publicationTitle"] = journal_meta.get("content", "")
82
84
 
83
85
  # Date
84
- date_meta = doc.find('meta', attrs={'name': 'citation_publication_date'})
86
+ date_meta = doc.find("meta", attrs={"name": "citation_publication_date"})
85
87
  if date_meta:
86
- item['date'] = date_meta.get('content', '')
88
+ item["date"] = date_meta.get("content", "")
87
89
 
88
90
  # Volume
89
- volume_meta = doc.find('meta', attrs={'name': 'citation_volume'})
91
+ volume_meta = doc.find("meta", attrs={"name": "citation_volume"})
90
92
  if volume_meta:
91
- item['volume'] = volume_meta.get('content', '')
93
+ item["volume"] = volume_meta.get("content", "")
92
94
 
93
95
  # Issue
94
- issue_meta = doc.find('meta', attrs={'name': 'citation_issue'})
96
+ issue_meta = doc.find("meta", attrs={"name": "citation_issue"})
95
97
  if issue_meta:
96
- item['issue'] = issue_meta.get('content', '')
98
+ item["issue"] = issue_meta.get("content", "")
97
99
 
98
100
  # Pages
99
- first_page_meta = doc.find('meta', attrs={'name': 'citation_firstpage'})
100
- last_page_meta = doc.find('meta', attrs={'name': 'citation_lastpage'})
101
+ first_page_meta = doc.find("meta", attrs={"name": "citation_firstpage"})
102
+ last_page_meta = doc.find("meta", attrs={"name": "citation_lastpage"})
101
103
  if first_page_meta and last_page_meta:
102
- first_page = first_page_meta.get('content', '')
103
- last_page = last_page_meta.get('content', '')
104
+ first_page = first_page_meta.get("content", "")
105
+ last_page = last_page_meta.get("content", "")
104
106
  if first_page and last_page:
105
- item['pages'] = f'{first_page}-{last_page}'
107
+ item["pages"] = f"{first_page}-{last_page}"
106
108
 
107
109
  # ISSN
108
- issn_meta = doc.find('meta', attrs={'name': 'citation_issn'})
110
+ issn_meta = doc.find("meta", attrs={"name": "citation_issn"})
109
111
  if issn_meta:
110
- item['ISSN'] = issn_meta.get('content', '')
112
+ item["ISSN"] = issn_meta.get("content", "")
111
113
 
112
114
  # Language
113
- lang_meta = doc.find('meta', attrs={'name': 'citation_language'})
115
+ lang_meta = doc.find("meta", attrs={"name": "citation_language"})
114
116
  if lang_meta:
115
- item['language'] = lang_meta.get('content', '')
117
+ item["language"] = lang_meta.get("content", "")
116
118
 
117
119
  # Keywords
118
- keywords_meta = doc.find('meta', attrs={'name': 'citation_keywords'})
120
+ keywords_meta = doc.find("meta", attrs={"name": "citation_keywords"})
119
121
  if keywords_meta:
120
- keywords = keywords_meta.get('content', '').split(';')
122
+ keywords = keywords_meta.get("content", "").split(";")
121
123
  for keyword in keywords:
122
124
  keyword = keyword.strip()
123
125
  if keyword:
124
- item['tags'].append({'tag': keyword})
126
+ item["tags"].append({"tag": keyword})
125
127
 
126
128
  # PDF URL
127
- pdf_meta = doc.find('meta', attrs={'name': 'citation_pdf_url'})
129
+ pdf_meta = doc.find("meta", attrs={"name": "citation_pdf_url"})
128
130
  if pdf_meta:
129
- pdf_url = pdf_meta.get('content', '')
131
+ pdf_url = pdf_meta.get("content", "")
130
132
  if pdf_url:
131
- item['attachments'].append({
132
- 'url': pdf_url,
133
- 'title': 'Full Text PDF',
134
- 'mimeType': 'application/pdf'
135
- })
133
+ item["attachments"].append(
134
+ {
135
+ "url": pdf_url,
136
+ "title": "Full Text PDF",
137
+ "mimeType": "application/pdf",
138
+ }
139
+ )
136
140
 
137
141
  return item
138
142
 
139
143
  def _post_process(self, doc: BeautifulSoup, item: Dict[str, Any]):
140
144
  """Post-process to add abstract if not in embedded metadata."""
141
- if not item.get('abstractNote'):
142
- abstract_elem = doc.select_one('p.summary')
145
+ if not item.get("abstractNote"):
146
+ abstract_elem = doc.select_one("p.summary")
143
147
  if abstract_elem:
144
- item['abstractNote'] = abstract_elem.get_text().strip()
148
+ item["abstractNote"] = abstract_elem.get_text().strip()
145
149
 
146
150
  def _clean_author(self, name: str) -> Dict[str, Any]:
147
151
  """Parse author name."""
148
152
  name = name.strip()
149
153
 
150
154
  # Handle comma-separated (LastName, FirstName)
151
- if ',' in name:
152
- parts = name.split(',', 1)
155
+ if "," in name:
156
+ parts = name.split(",", 1)
153
157
  return {
154
- 'firstName': parts[1].strip() if len(parts) > 1 else '',
155
- 'lastName': parts[0].strip(),
156
- 'creatorType': 'author'
158
+ "firstName": parts[1].strip() if len(parts) > 1 else "",
159
+ "lastName": parts[0].strip(),
160
+ "creatorType": "author",
157
161
  }
158
162
  else:
159
163
  # Space-separated
160
164
  parts = name.split()
161
165
  if len(parts) >= 2:
162
166
  return {
163
- 'firstName': ' '.join(parts[:-1]),
164
- 'lastName': parts[-1],
165
- 'creatorType': 'author'
167
+ "firstName": " ".join(parts[:-1]),
168
+ "lastName": parts[-1],
169
+ "creatorType": "author",
166
170
  }
167
171
  else:
168
- return {
169
- 'lastName': name,
170
- 'creatorType': 'author',
171
- 'fieldMode': True
172
- }
172
+ return {"lastName": name, "creatorType": "author", "fieldMode": True}
@@ -34,16 +34,16 @@ class ChamplainSocietyCollectionTranslator:
34
34
  "inRepository": True,
35
35
  "translatorType": 4,
36
36
  "browserSupport": "gcsibv",
37
- "lastUpdated": "2021-12-28 04:41:28"
37
+ "lastUpdated": "2021-12-28 04:41:28",
38
38
  }
39
39
 
40
40
  def detect_web(self, doc: BeautifulSoup, url: str) -> str:
41
41
  """Detect if page is a book or search results."""
42
- if 'search_results' in url:
43
- return 'multiple'
44
- elif 'item_record' in url:
45
- return 'book'
46
- return ''
42
+ if "search_results" in url:
43
+ return "multiple"
44
+ elif "item_record" in url:
45
+ return "book"
46
+ return ""
47
47
 
48
48
  def do_web(self, doc: BeautifulSoup, url: str) -> Dict[str, Any]:
49
49
  """Extract book data."""
@@ -61,25 +61,25 @@ class ChamplainSocietyCollectionTranslator:
61
61
  Dictionary containing book metadata
62
62
  """
63
63
  item = {
64
- 'itemType': 'book',
65
- 'creators': [],
66
- 'tags': [],
67
- 'attachments': [],
68
- 'url': url
64
+ "itemType": "book",
65
+ "creators": [],
66
+ "tags": [],
67
+ "attachments": [],
68
+ "url": url,
69
69
  }
70
70
 
71
71
  data_tags = {}
72
72
 
73
73
  # Extract metadata from table
74
- table = doc.find('table')
74
+ table = doc.find("table")
75
75
  if table:
76
- rows = table.find_all('tr')
76
+ rows = table.find_all("tr")
77
77
  for row in rows:
78
- header = row.find('b')
79
- value_cell = row.find_all('td')
78
+ header = row.find("b")
79
+ value_cell = row.find_all("td")
80
80
 
81
81
  if header and len(value_cell) >= 2:
82
- field_title = header.get_text().strip().replace('\s+', '')
82
+ field_title = header.get_text().strip().replace("\s+", "")
83
83
  field_value = value_cell[1].get_text().strip()
84
84
 
85
85
  # Normalize French to English
@@ -87,84 +87,86 @@ class ChamplainSocietyCollectionTranslator:
87
87
  data_tags[field_title] = field_value
88
88
 
89
89
  # Process authors
90
- if 'Author:' in data_tags:
91
- author_text = data_tags['Author:']
92
- if '; ' in author_text:
93
- authors = author_text.split('; ')
90
+ if "Author:" in data_tags:
91
+ author_text = data_tags["Author:"]
92
+ if "; " in author_text:
93
+ authors = author_text.split("; ")
94
94
  else:
95
95
  authors = [author_text]
96
96
 
97
97
  for author in authors:
98
98
  author = author.strip()
99
- if ', ' in author:
100
- parts = author.split(', ', 1)
101
- first_name = parts[1] if len(parts) > 1 else ''
99
+ if ", " in author:
100
+ parts = author.split(", ", 1)
101
+ first_name = parts[1] if len(parts) > 1 else ""
102
102
  last_name = parts[0]
103
- item['creators'].append({
104
- 'firstName': first_name,
105
- 'lastName': last_name,
106
- 'creatorType': 'author'
107
- })
103
+ item["creators"].append(
104
+ {
105
+ "firstName": first_name,
106
+ "lastName": last_name,
107
+ "creatorType": "author",
108
+ }
109
+ )
108
110
  else:
109
- item['creators'].append({
110
- 'lastName': author,
111
- 'creatorType': 'author',
112
- 'fieldMode': True
113
- })
111
+ item["creators"].append(
112
+ {"lastName": author, "creatorType": "author", "fieldMode": True}
113
+ )
114
114
 
115
115
  # Process published information
116
- if 'Published:' in data_tags:
117
- published = data_tags['Published:']
116
+ if "Published:" in data_tags:
117
+ published = data_tags["Published:"]
118
118
 
119
119
  # Extract place
120
- if ': ' in published:
121
- place_end = published.index(': ')
122
- item['place'] = published[:place_end]
123
- remainder = published[place_end + 2:]
120
+ if ": " in published:
121
+ place_end = published.index(": ")
122
+ item["place"] = published[:place_end]
123
+ remainder = published[place_end + 2 :]
124
124
 
125
125
  # Extract date and publisher
126
- if ', ' in remainder:
127
- date_start = remainder.rfind(', ')
128
- item['date'] = remainder[date_start + 2:]
129
- item['publisher'] = remainder[:date_start]
126
+ if ", " in remainder:
127
+ date_start = remainder.rfind(", ")
128
+ item["date"] = remainder[date_start + 2 :]
129
+ item["publisher"] = remainder[:date_start]
130
130
  else:
131
- item['publisher'] = remainder
131
+ item["publisher"] = remainder
132
132
 
133
133
  # Process subjects/tags
134
- if 'Subjects:' in data_tags:
135
- subjects = data_tags['Subjects:'].split('\n')
134
+ if "Subjects:" in data_tags:
135
+ subjects = data_tags["Subjects:"].split("\n")
136
136
  for subject in subjects:
137
137
  subject = subject.strip()
138
- if subject and re.search(r'\w', subject):
139
- item['tags'].append({'tag': subject})
138
+ if subject and re.search(r"\w", subject):
139
+ item["tags"].append({"tag": subject})
140
140
 
141
141
  # Other fields
142
- self._associate_data(item, data_tags, 'Extent:', 'pages')
143
- self._associate_data(item, data_tags, 'ID:', 'callNumber')
144
- self._associate_data(item, data_tags, 'Notes:', 'abstractNote')
142
+ self._associate_data(item, data_tags, "Extent:", "pages")
143
+ self._associate_data(item, data_tags, "ID:", "callNumber")
144
+ self._associate_data(item, data_tags, "Notes:", "abstractNote")
145
145
 
146
146
  # Title
147
- if 'Title:' in data_tags:
148
- item['title'] = data_tags['Title:']
147
+ if "Title:" in data_tags:
148
+ item["title"] = data_tags["Title:"]
149
149
  elif doc.title:
150
- item['title'] = doc.title.string
150
+ item["title"] = doc.title.string
151
151
  else:
152
- item['title'] = 'No Title Found: Champlain Collection'
152
+ item["title"] = "No Title Found: Champlain Collection"
153
153
 
154
154
  return item
155
155
 
156
156
  def _normalize_field_name(self, field_name: str) -> str:
157
157
  """Normalize French field names to English."""
158
158
  mapping = {
159
- 'Auteur:': 'Author:',
160
- 'Titre:': 'Title:',
161
- 'Description:': 'Extent:',
162
- 'Éditeur:': 'Published:',
163
- 'Sujet:': 'Subjects:'
159
+ "Auteur:": "Author:",
160
+ "Titre:": "Title:",
161
+ "Description:": "Extent:",
162
+ "Éditeur:": "Published:",
163
+ "Sujet:": "Subjects:",
164
164
  }
165
165
  return mapping.get(field_name, field_name)
166
166
 
167
- def _associate_data(self, item: Dict, data_tags: Dict, field: str, zotero_field: str):
167
+ def _associate_data(
168
+ self, item: Dict, data_tags: Dict, field: str, zotero_field: str
169
+ ):
168
170
  """Associate data from tags to item."""
169
171
  if field in data_tags:
170
172
  item[zotero_field] = data_tags[field]
@@ -34,11 +34,15 @@ class ChicagoJournalOfTheoreticalComputerScienceTranslator:
34
34
  "inRepository": True,
35
35
  "translatorType": 4,
36
36
  "browserSupport": "gcsibv",
37
- "lastUpdated": "2025-05-14 00:10:19"
37
+ "lastUpdated": "2025-05-14 00:10:19",
38
38
  }
39
39
 
40
- SINGLE_RE = re.compile(r'^https?://cjtcs\.cs\.uchicago\.edu/articles/\w+/\d+/contents\.html')
41
- MULTIPLE_RE = re.compile(r'^https?://cjtcs\.cs\.uchicago\.edu/articles/\w+/contents\.html')
40
+ SINGLE_RE = re.compile(
41
+ r"^https?://cjtcs\.cs\.uchicago\.edu/articles/\w+/\d+/contents\.html"
42
+ )
43
+ MULTIPLE_RE = re.compile(
44
+ r"^https?://cjtcs\.cs\.uchicago\.edu/articles/\w+/contents\.html"
45
+ )
42
46
 
43
47
  def detect_web(self, doc: BeautifulSoup, url: str) -> str:
44
48
  """Detect if page is an article or volume contents."""
@@ -46,17 +50,21 @@ class ChicagoJournalOfTheoreticalComputerScienceTranslator:
46
50
  # Check for article links
47
51
  article_links = doc.select('ul > li > ul > li a[href*="contents.html"]')
48
52
  if article_links:
49
- return 'multiple'
53
+ return "multiple"
50
54
  elif self.SINGLE_RE.match(url):
51
- return 'journalArticle'
55
+ return "journalArticle"
52
56
 
53
- return ''
57
+ return ""
54
58
 
55
- async def do_web(self, doc: BeautifulSoup, url: str, request_text_func) -> Dict[str, Any]:
59
+ async def do_web(
60
+ self, doc: BeautifulSoup, url: str, request_text_func
61
+ ) -> Dict[str, Any]:
56
62
  """Extract article data."""
57
63
  return await self.scrape(doc, url, request_text_func)
58
64
 
59
- async def scrape(self, doc: BeautifulSoup, url: str, request_text_func) -> Dict[str, Any]:
65
+ async def scrape(
66
+ self, doc: BeautifulSoup, url: str, request_text_func
67
+ ) -> Dict[str, Any]:
60
68
  """
61
69
  Scrape article data by fetching and parsing BibTeX.
62
70
 
@@ -69,18 +77,18 @@ class ChicagoJournalOfTheoreticalComputerScienceTranslator:
69
77
  Dictionary containing article metadata
70
78
  """
71
79
  item = {
72
- 'itemType': 'journalArticle',
73
- 'creators': [],
74
- 'tags': [],
75
- 'attachments': []
80
+ "itemType": "journalArticle",
81
+ "creators": [],
82
+ "tags": [],
83
+ "attachments": [],
76
84
  }
77
85
 
78
86
  # Find BibTeX link
79
87
  bib_link = doc.select_one('a[href$=".bib"]')
80
- if bib_link and bib_link.get('href'):
81
- bib_url = bib_link['href']
82
- if not bib_url.startswith('http'):
83
- bib_url = 'http://cjtcs.cs.uchicago.edu' + bib_url
88
+ if bib_link and bib_link.get("href"):
89
+ bib_url = bib_link["href"]
90
+ if not bib_url.startswith("http"):
91
+ bib_url = "http://cjtcs.cs.uchicago.edu" + bib_url
84
92
 
85
93
  # Fetch BibTeX
86
94
  bib_text = await request_text_func(bib_url)
@@ -92,103 +100,111 @@ class ChicagoJournalOfTheoreticalComputerScienceTranslator:
92
100
 
93
101
  # Extract DOI
94
102
  doi_link = doc.select_one('a[href*="dx.doi.org"]')
95
- if doi_link and doi_link.get('href'):
96
- doi_url = doi_link['href']
97
- item['DOI'] = re.sub(r'https?://(?:dx\.)?doi\.org/', '', doi_url)
103
+ if doi_link and doi_link.get("href"):
104
+ doi_url = doi_link["href"]
105
+ item["DOI"] = re.sub(r"https?://(?:dx\.)?doi\.org/", "", doi_url)
98
106
 
99
107
  # Add PDF attachment if available
100
108
  pdf_link = doc.select_one('a[href$=".pdf"]')
101
- if pdf_link and pdf_link.get('href'):
102
- pdf_url = pdf_link['href']
103
- if not pdf_url.startswith('http'):
104
- pdf_url = 'http://cjtcs.cs.uchicago.edu' + pdf_url
105
- item['attachments'].append({
106
- 'url': pdf_url,
107
- 'title': 'Full Text PDF',
108
- 'mimeType': 'application/pdf'
109
- })
109
+ if pdf_link and pdf_link.get("href"):
110
+ pdf_url = pdf_link["href"]
111
+ if not pdf_url.startswith("http"):
112
+ pdf_url = "http://cjtcs.cs.uchicago.edu" + pdf_url
113
+ item["attachments"].append(
114
+ {
115
+ "url": pdf_url,
116
+ "title": "Full Text PDF",
117
+ "mimeType": "application/pdf",
118
+ }
119
+ )
110
120
  else:
111
121
  # Add snapshot if no PDF
112
- item['attachments'].append({
113
- 'title': 'Snapshot',
114
- 'mimeType': 'text/html',
115
- 'url': url
116
- })
122
+ item["attachments"].append(
123
+ {"title": "Snapshot", "mimeType": "text/html", "url": url}
124
+ )
117
125
 
118
126
  return item
119
127
 
120
128
  def _fix_author_line(self, bib_text: str) -> str:
121
129
  """Fix BibTeX author line if missing equals sign."""
122
- lines = bib_text.split('\n')
130
+ lines = bib_text.split("\n")
123
131
  fixed_lines = []
124
132
  for line in lines:
125
133
  # Add equals sign after "author" if missing
126
- fixed_line = re.sub(r'^(\s*author)(?!\s*=)', r'\1=', line)
134
+ fixed_line = re.sub(r"^(\s*author)(?!\s*=)", r"\1=", line)
127
135
  fixed_lines.append(fixed_line)
128
- return '\n'.join(fixed_lines)
136
+ return "\n".join(fixed_lines)
129
137
 
130
138
  def _parse_bibtex(self, bib_text: str, item: Dict[str, Any]):
131
139
  """Parse BibTeX and fill item fields."""
132
140
  # Simple BibTeX parser
133
141
  # Extract title
134
- title_match = re.search(r'title\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE | re.DOTALL)
142
+ title_match = re.search(
143
+ r'title\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE | re.DOTALL
144
+ )
135
145
  if title_match:
136
- item['title'] = title_match.group(1).strip()
146
+ item["title"] = title_match.group(1).strip()
137
147
 
138
148
  # Extract authors
139
- author_match = re.search(r'author\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE | re.DOTALL)
149
+ author_match = re.search(
150
+ r'author\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE | re.DOTALL
151
+ )
140
152
  if author_match:
141
153
  authors = author_match.group(1).strip()
142
154
  # Split by 'and'
143
- for author in authors.split(' and '):
155
+ for author in authors.split(" and "):
144
156
  author = author.strip()
145
157
  if author:
146
- item['creators'].append(self._parse_author(author))
158
+ item["creators"].append(self._parse_author(author))
147
159
 
148
160
  # Extract year/date
149
161
  year_match = re.search(r'year\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE)
150
162
  if year_match:
151
- item['date'] = year_match.group(1).strip()
163
+ item["date"] = year_match.group(1).strip()
152
164
 
153
165
  # Extract volume
154
166
  volume_match = re.search(r'volume\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE)
155
167
  if volume_match:
156
- item['volume'] = volume_match.group(1).strip()
168
+ item["volume"] = volume_match.group(1).strip()
157
169
 
158
170
  # Extract issue/number
159
- issue_match = re.search(r'(?:issue|number)\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE)
171
+ issue_match = re.search(
172
+ r'(?:issue|number)\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE
173
+ )
160
174
  if issue_match:
161
- item['issue'] = issue_match.group(1).strip()
175
+ item["issue"] = issue_match.group(1).strip()
162
176
 
163
177
  # Extract journal
164
- journal_match = re.search(r'journal\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE)
178
+ journal_match = re.search(
179
+ r'journal\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE
180
+ )
165
181
  if journal_match:
166
- item['publicationTitle'] = journal_match.group(1).strip()
182
+ item["publicationTitle"] = journal_match.group(1).strip()
167
183
 
168
184
  def _parse_author(self, author_str: str) -> Dict[str, Any]:
169
185
  """Parse author name from BibTeX format."""
170
186
  author_str = author_str.strip()
171
187
 
172
188
  # Handle "Last, First" format
173
- if ',' in author_str:
174
- parts = author_str.split(',', 1)
189
+ if "," in author_str:
190
+ parts = author_str.split(",", 1)
175
191
  return {
176
- 'firstName': parts[1].strip() if len(parts) > 1 else '',
177
- 'lastName': parts[0].strip(),
178
- 'creatorType': 'author'
192
+ "firstName": parts[1].strip() if len(parts) > 1 else "",
193
+ "lastName": parts[0].strip(),
194
+ "creatorType": "author",
179
195
  }
180
196
  else:
181
197
  # Handle "First Last" format
182
198
  parts = author_str.split()
183
199
  if len(parts) >= 2:
184
200
  return {
185
- 'firstName': ' '.join(parts[:-1]),
186
- 'lastName': parts[-1],
187
- 'creatorType': 'author'
201
+ "firstName": " ".join(parts[:-1]),
202
+ "lastName": parts[-1],
203
+ "creatorType": "author",
188
204
  }
189
205
  else:
190
206
  return {
191
- 'lastName': author_str,
192
- 'creatorType': 'author',
193
- 'fieldMode': True
207
+ "lastName": author_str,
208
+ "creatorType": "author",
209
+ "fieldMode": True,
194
210
  }