scitex 2.5.0__py3-none-any.whl → 2.7.3__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- scitex/__init__.py +25 -10
- scitex/__main__.py +2 -1
- scitex/__version__.py +1 -1
- scitex/_optional_deps.py +13 -20
- scitex/ai/__init__.py +5 -0
- scitex/ai/_gen_ai/_Anthropic.py +3 -1
- scitex/ai/_gen_ai/_BaseGenAI.py +3 -2
- scitex/ai/_gen_ai/_DeepSeek.py +1 -1
- scitex/ai/_gen_ai/_Google.py +3 -2
- scitex/ai/_gen_ai/_Llama.py +4 -2
- scitex/ai/_gen_ai/_OpenAI.py +3 -1
- scitex/ai/_gen_ai/_PARAMS.py +1 -0
- scitex/ai/_gen_ai/_Perplexity.py +3 -1
- scitex/ai/_gen_ai/__init__.py +1 -0
- scitex/ai/_gen_ai/_format_output_func.py +3 -1
- scitex/ai/classification/CrossValidationExperiment.py +8 -14
- scitex/ai/classification/examples/timeseries_cv_demo.py +128 -112
- scitex/ai/classification/reporters/_BaseClassificationReporter.py +2 -0
- scitex/ai/classification/reporters/_ClassificationReporter.py +30 -45
- scitex/ai/classification/reporters/_MultiClassificationReporter.py +8 -11
- scitex/ai/classification/reporters/_SingleClassificationReporter.py +126 -182
- scitex/ai/classification/reporters/__init__.py +1 -1
- scitex/ai/classification/reporters/reporter_utils/_Plotter.py +213 -119
- scitex/ai/classification/reporters/reporter_utils/__init__.py +28 -36
- scitex/ai/classification/reporters/reporter_utils/aggregation.py +125 -143
- scitex/ai/classification/reporters/reporter_utils/data_models.py +128 -120
- scitex/ai/classification/reporters/reporter_utils/reporting.py +507 -340
- scitex/ai/classification/reporters/reporter_utils/storage.py +4 -1
- scitex/ai/classification/reporters/reporter_utils/validation.py +141 -154
- scitex/ai/classification/timeseries/_TimeSeriesBlockingSplit.py +204 -129
- scitex/ai/classification/timeseries/_TimeSeriesCalendarSplit.py +215 -171
- scitex/ai/classification/timeseries/_TimeSeriesMetadata.py +17 -17
- scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit.py +67 -143
- scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit_v01-not-using-n_splits.py +67 -143
- scitex/ai/classification/timeseries/_TimeSeriesStrategy.py +12 -13
- scitex/ai/classification/timeseries/_TimeSeriesStratifiedSplit.py +231 -144
- scitex/ai/classification/timeseries/__init__.py +2 -4
- scitex/ai/classification/timeseries/_normalize_timestamp.py +3 -0
- scitex/ai/clustering/_pca.py +0 -1
- scitex/ai/clustering/_umap.py +1 -2
- scitex/ai/feature_extraction/__init__.py +10 -8
- scitex/ai/feature_extraction/vit.py +0 -1
- scitex/ai/feature_selection/feature_selection.py +3 -8
- scitex/ai/metrics/_calc_conf_mat.py +2 -0
- scitex/ai/metrics/_calc_feature_importance.py +3 -7
- scitex/ai/metrics/_calc_pre_rec_auc.py +5 -5
- scitex/ai/metrics/_calc_roc_auc.py +4 -2
- scitex/ai/metrics/_calc_seizure_prediction_metrics.py +35 -20
- scitex/ai/metrics/_calc_silhouette_score.py +1 -3
- scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger.py +0 -3
- scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger2020.py +0 -3
- scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger913A.py +0 -3
- scitex/ai/optim/_optimizers.py +1 -1
- scitex/ai/plt/__init__.py +6 -1
- scitex/ai/plt/_plot_feature_importance.py +1 -3
- scitex/ai/plt/_plot_learning_curve.py +9 -24
- scitex/ai/plt/_plot_optuna_study.py +4 -3
- scitex/ai/plt/_plot_pre_rec_curve.py +9 -15
- scitex/ai/plt/_plot_roc_curve.py +6 -8
- scitex/ai/plt/_stx_conf_mat.py +121 -122
- scitex/ai/sampling/undersample.py +3 -2
- scitex/ai/sklearn/__init__.py +2 -2
- scitex/ai/training/_LearningCurveLogger.py +23 -10
- scitex/ai/utils/_check_params.py +0 -1
- scitex/audio/README.md +52 -0
- scitex/audio/__init__.py +384 -0
- scitex/audio/__main__.py +129 -0
- scitex/audio/_tts.py +334 -0
- scitex/audio/engines/__init__.py +44 -0
- scitex/audio/engines/base.py +275 -0
- scitex/audio/engines/elevenlabs_engine.py +143 -0
- scitex/audio/engines/gtts_engine.py +162 -0
- scitex/audio/engines/pyttsx3_engine.py +131 -0
- scitex/audio/mcp_server.py +757 -0
- scitex/benchmark/__init__.py +15 -25
- scitex/benchmark/benchmark.py +124 -117
- scitex/benchmark/monitor.py +117 -107
- scitex/benchmark/profiler.py +61 -58
- scitex/bridge/__init__.py +110 -0
- scitex/bridge/_helpers.py +149 -0
- scitex/bridge/_plt_vis.py +529 -0
- scitex/bridge/_protocol.py +283 -0
- scitex/bridge/_stats_plt.py +261 -0
- scitex/bridge/_stats_vis.py +265 -0
- scitex/browser/__init__.py +0 -2
- scitex/browser/auth/__init__.py +0 -0
- scitex/browser/auth/google.py +16 -11
- scitex/browser/automation/CookieHandler.py +2 -3
- scitex/browser/collaboration/__init__.py +3 -0
- scitex/browser/collaboration/auth_helpers.py +3 -1
- scitex/browser/collaboration/collaborative_agent.py +2 -0
- scitex/browser/collaboration/interactive_panel.py +2 -2
- scitex/browser/collaboration/shared_session.py +20 -11
- scitex/browser/collaboration/standard_interactions.py +1 -0
- scitex/browser/core/BrowserMixin.py +12 -30
- scitex/browser/core/ChromeProfileManager.py +9 -24
- scitex/browser/debugging/_browser_logger.py +15 -25
- scitex/browser/debugging/_failure_capture.py +9 -2
- scitex/browser/debugging/_highlight_element.py +15 -6
- scitex/browser/debugging/_show_grid.py +5 -6
- scitex/browser/debugging/_sync_session.py +4 -3
- scitex/browser/debugging/_test_monitor.py +14 -5
- scitex/browser/debugging/_visual_cursor.py +46 -35
- scitex/browser/interaction/click_center.py +4 -3
- scitex/browser/interaction/click_with_fallbacks.py +7 -10
- scitex/browser/interaction/close_popups.py +79 -66
- scitex/browser/interaction/fill_with_fallbacks.py +8 -8
- scitex/browser/pdf/__init__.py +3 -1
- scitex/browser/pdf/click_download_for_chrome_pdf_viewer.py +11 -10
- scitex/browser/pdf/detect_chrome_pdf_viewer.py +3 -6
- scitex/browser/remote/CaptchaHandler.py +109 -96
- scitex/browser/remote/ZenRowsAPIClient.py +91 -97
- scitex/browser/remote/ZenRowsBrowserManager.py +138 -112
- scitex/browser/stealth/HumanBehavior.py +4 -9
- scitex/browser/stealth/StealthManager.py +11 -26
- scitex/capture/__init__.py +17 -17
- scitex/capture/__main__.py +2 -3
- scitex/capture/capture.py +23 -51
- scitex/capture/cli.py +14 -39
- scitex/capture/gif.py +5 -9
- scitex/capture/mcp_server.py +7 -20
- scitex/capture/session.py +4 -3
- scitex/capture/utils.py +18 -53
- scitex/cli/__init__.py +1 -1
- scitex/cli/cloud.py +158 -116
- scitex/cli/config.py +224 -0
- scitex/cli/main.py +41 -40
- scitex/cli/scholar.py +60 -27
- scitex/cli/security.py +14 -20
- scitex/cli/web.py +87 -90
- scitex/cli/writer.py +51 -45
- scitex/cloud/__init__.py +14 -11
- scitex/cloud/_matplotlib_hook.py +6 -6
- scitex/config/README.md +313 -0
- scitex/config/{PriorityConfig.py → _PriorityConfig.py} +114 -17
- scitex/config/_ScitexConfig.py +319 -0
- scitex/config/__init__.py +41 -9
- scitex/config/_paths.py +325 -0
- scitex/config/default.yaml +81 -0
- scitex/context/_suppress_output.py +2 -3
- scitex/db/_BaseMixins/_BaseBackupMixin.py +3 -1
- scitex/db/_BaseMixins/_BaseBatchMixin.py +3 -1
- scitex/db/_BaseMixins/_BaseBlobMixin.py +3 -1
- scitex/db/_BaseMixins/_BaseImportExportMixin.py +1 -3
- scitex/db/_BaseMixins/_BaseIndexMixin.py +3 -1
- scitex/db/_BaseMixins/_BaseMaintenanceMixin.py +1 -3
- scitex/db/_BaseMixins/_BaseQueryMixin.py +3 -1
- scitex/db/_BaseMixins/_BaseRowMixin.py +3 -1
- scitex/db/_BaseMixins/_BaseTableMixin.py +3 -1
- scitex/db/_BaseMixins/_BaseTransactionMixin.py +1 -3
- scitex/db/_BaseMixins/__init__.py +1 -1
- scitex/db/__init__.py +9 -1
- scitex/db/__main__.py +8 -21
- scitex/db/_check_health.py +15 -31
- scitex/db/_delete_duplicates.py +7 -4
- scitex/db/_inspect.py +22 -38
- scitex/db/_inspect_optimized.py +89 -85
- scitex/db/_postgresql/_PostgreSQL.py +0 -1
- scitex/db/_postgresql/_PostgreSQLMixins/_BlobMixin.py +3 -1
- scitex/db/_postgresql/_PostgreSQLMixins/_ConnectionMixin.py +1 -3
- scitex/db/_postgresql/_PostgreSQLMixins/_ImportExportMixin.py +1 -3
- scitex/db/_postgresql/_PostgreSQLMixins/_MaintenanceMixin.py +1 -4
- scitex/db/_postgresql/_PostgreSQLMixins/_QueryMixin.py +3 -3
- scitex/db/_postgresql/_PostgreSQLMixins/_RowMixin.py +3 -1
- scitex/db/_postgresql/_PostgreSQLMixins/_TransactionMixin.py +1 -3
- scitex/db/_postgresql/__init__.py +1 -1
- scitex/db/_sqlite3/_SQLite3.py +2 -4
- scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin.py +11 -12
- scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin_v01-need-_hash-col.py +19 -14
- scitex/db/_sqlite3/_SQLite3Mixins/_BatchMixin.py +3 -1
- scitex/db/_sqlite3/_SQLite3Mixins/_BlobMixin.py +7 -7
- scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin.py +118 -111
- scitex/db/_sqlite3/_SQLite3Mixins/_ConnectionMixin.py +8 -10
- scitex/db/_sqlite3/_SQLite3Mixins/_GitMixin.py +17 -45
- scitex/db/_sqlite3/_SQLite3Mixins/_ImportExportMixin.py +1 -3
- scitex/db/_sqlite3/_SQLite3Mixins/_IndexMixin.py +3 -1
- scitex/db/_sqlite3/_SQLite3Mixins/_QueryMixin.py +3 -4
- scitex/db/_sqlite3/_SQLite3Mixins/_RowMixin.py +9 -9
- scitex/db/_sqlite3/_SQLite3Mixins/_TableMixin.py +18 -11
- scitex/db/_sqlite3/_SQLite3Mixins/__init__.py +1 -0
- scitex/db/_sqlite3/__init__.py +1 -1
- scitex/db/_sqlite3/_delete_duplicates.py +13 -11
- scitex/decorators/__init__.py +29 -4
- scitex/decorators/_auto_order.py +43 -43
- scitex/decorators/_batch_fn.py +12 -6
- scitex/decorators/_cache_disk.py +8 -9
- scitex/decorators/_cache_disk_async.py +8 -7
- scitex/decorators/_combined.py +19 -13
- scitex/decorators/_converters.py +16 -3
- scitex/decorators/_deprecated.py +32 -22
- scitex/decorators/_numpy_fn.py +18 -4
- scitex/decorators/_pandas_fn.py +17 -5
- scitex/decorators/_signal_fn.py +17 -3
- scitex/decorators/_torch_fn.py +32 -15
- scitex/decorators/_xarray_fn.py +23 -9
- scitex/dev/_analyze_code_flow.py +0 -2
- scitex/dev/plt/__init__.py +272 -0
- scitex/dev/plt/plot_mpl_axhline.py +28 -0
- scitex/dev/plt/plot_mpl_axhspan.py +28 -0
- scitex/dev/plt/plot_mpl_axvline.py +28 -0
- scitex/dev/plt/plot_mpl_axvspan.py +28 -0
- scitex/dev/plt/plot_mpl_bar.py +29 -0
- scitex/dev/plt/plot_mpl_barh.py +29 -0
- scitex/dev/plt/plot_mpl_boxplot.py +28 -0
- scitex/dev/plt/plot_mpl_contour.py +31 -0
- scitex/dev/plt/plot_mpl_contourf.py +31 -0
- scitex/dev/plt/plot_mpl_errorbar.py +30 -0
- scitex/dev/plt/plot_mpl_eventplot.py +28 -0
- scitex/dev/plt/plot_mpl_fill.py +30 -0
- scitex/dev/plt/plot_mpl_fill_between.py +31 -0
- scitex/dev/plt/plot_mpl_hexbin.py +28 -0
- scitex/dev/plt/plot_mpl_hist.py +28 -0
- scitex/dev/plt/plot_mpl_hist2d.py +28 -0
- scitex/dev/plt/plot_mpl_imshow.py +29 -0
- scitex/dev/plt/plot_mpl_pcolormesh.py +31 -0
- scitex/dev/plt/plot_mpl_pie.py +29 -0
- scitex/dev/plt/plot_mpl_plot.py +29 -0
- scitex/dev/plt/plot_mpl_quiver.py +31 -0
- scitex/dev/plt/plot_mpl_scatter.py +28 -0
- scitex/dev/plt/plot_mpl_stackplot.py +31 -0
- scitex/dev/plt/plot_mpl_stem.py +29 -0
- scitex/dev/plt/plot_mpl_step.py +29 -0
- scitex/dev/plt/plot_mpl_violinplot.py +28 -0
- scitex/dev/plt/plot_sns_barplot.py +29 -0
- scitex/dev/plt/plot_sns_boxplot.py +29 -0
- scitex/dev/plt/plot_sns_heatmap.py +28 -0
- scitex/dev/plt/plot_sns_histplot.py +29 -0
- scitex/dev/plt/plot_sns_kdeplot.py +29 -0
- scitex/dev/plt/plot_sns_lineplot.py +31 -0
- scitex/dev/plt/plot_sns_scatterplot.py +29 -0
- scitex/dev/plt/plot_sns_stripplot.py +29 -0
- scitex/dev/plt/plot_sns_swarmplot.py +29 -0
- scitex/dev/plt/plot_sns_violinplot.py +29 -0
- scitex/dev/plt/plot_stx_bar.py +29 -0
- scitex/dev/plt/plot_stx_barh.py +29 -0
- scitex/dev/plt/plot_stx_box.py +28 -0
- scitex/dev/plt/plot_stx_boxplot.py +28 -0
- scitex/dev/plt/plot_stx_conf_mat.py +28 -0
- scitex/dev/plt/plot_stx_contour.py +31 -0
- scitex/dev/plt/plot_stx_ecdf.py +28 -0
- scitex/dev/plt/plot_stx_errorbar.py +30 -0
- scitex/dev/plt/plot_stx_fill_between.py +31 -0
- scitex/dev/plt/plot_stx_fillv.py +28 -0
- scitex/dev/plt/plot_stx_heatmap.py +28 -0
- scitex/dev/plt/plot_stx_image.py +28 -0
- scitex/dev/plt/plot_stx_imshow.py +28 -0
- scitex/dev/plt/plot_stx_joyplot.py +28 -0
- scitex/dev/plt/plot_stx_kde.py +28 -0
- scitex/dev/plt/plot_stx_line.py +28 -0
- scitex/dev/plt/plot_stx_mean_ci.py +28 -0
- scitex/dev/plt/plot_stx_mean_std.py +28 -0
- scitex/dev/plt/plot_stx_median_iqr.py +28 -0
- scitex/dev/plt/plot_stx_raster.py +28 -0
- scitex/dev/plt/plot_stx_rectangle.py +28 -0
- scitex/dev/plt/plot_stx_scatter.py +29 -0
- scitex/dev/plt/plot_stx_shaded_line.py +29 -0
- scitex/dev/plt/plot_stx_violin.py +28 -0
- scitex/dev/plt/plot_stx_violinplot.py +28 -0
- scitex/dict/_DotDict.py +15 -19
- scitex/dict/_flatten.py +1 -0
- scitex/dict/_listed_dict.py +1 -0
- scitex/dict/_pop_keys.py +1 -0
- scitex/dict/_replace.py +1 -0
- scitex/dict/_safe_merge.py +1 -0
- scitex/dict/_to_str.py +2 -3
- scitex/dsp/__init__.py +13 -4
- scitex/dsp/_crop.py +3 -1
- scitex/dsp/_detect_ripples.py +3 -1
- scitex/dsp/_modulation_index.py +3 -1
- scitex/dsp/_time.py +3 -1
- scitex/dsp/_wavelet.py +0 -1
- scitex/dsp/example.py +0 -5
- scitex/dsp/filt.py +4 -0
- scitex/dsp/utils/__init__.py +4 -1
- scitex/dsp/utils/pac.py +3 -3
- scitex/dt/_normalize_timestamp.py +4 -1
- scitex/errors.py +3 -6
- scitex/etc/__init__.py +1 -1
- scitex/fig/__init__.py +352 -0
- scitex/{vis → fig}/backend/__init__.py +3 -3
- scitex/{vis/backend/export.py → fig/backend/_export.py} +1 -1
- scitex/{vis/backend/parser.py → fig/backend/_parser.py} +2 -4
- scitex/{vis/backend/render.py → fig/backend/_render.py} +1 -1
- scitex/{vis → fig}/canvas.py +16 -4
- scitex/{vis → fig}/editor/__init__.py +0 -0
- scitex/{vis → fig}/editor/_dearpygui_editor.py +450 -304
- scitex/fig/editor/_defaults.py +300 -0
- scitex/fig/editor/_edit.py +751 -0
- scitex/{vis → fig}/editor/_flask_editor.py +8 -8
- scitex/{vis → fig}/editor/_mpl_editor.py +63 -48
- scitex/{vis → fig}/editor/_qt_editor.py +391 -160
- scitex/{vis → fig}/editor/_tkinter_editor.py +146 -89
- scitex/fig/editor/flask_editor/__init__.py +21 -0
- scitex/fig/editor/flask_editor/_bbox.py +1276 -0
- scitex/fig/editor/flask_editor/_core.py +624 -0
- scitex/fig/editor/flask_editor/_plotter.py +601 -0
- scitex/fig/editor/flask_editor/_renderer.py +739 -0
- scitex/{vis/editor/flask_editor/utils.py → fig/editor/flask_editor/_utils.py} +13 -14
- scitex/{vis → fig}/editor/flask_editor/templates/__init__.py +6 -6
- scitex/fig/editor/flask_editor/templates/_html.py +834 -0
- scitex/fig/editor/flask_editor/templates/_scripts.py +3136 -0
- scitex/fig/editor/flask_editor/templates/_styles.py +1346 -0
- scitex/{vis → fig}/io/__init__.py +18 -6
- scitex/fig/io/_bundle.py +973 -0
- scitex/{vis/io/canvas.py → fig/io/_canvas.py} +9 -5
- scitex/{vis/io/data.py → fig/io/_data.py} +14 -10
- scitex/{vis/io/directory.py → fig/io/_directory.py} +7 -4
- scitex/{vis/io/export.py → fig/io/_export.py} +16 -13
- scitex/{vis/io/load.py → fig/io/_load.py} +2 -2
- scitex/{vis/io/panel.py → fig/io/_panel.py} +22 -14
- scitex/{vis/io/save.py → fig/io/_save.py} +1 -1
- scitex/{vis → fig}/model/__init__.py +8 -8
- scitex/{vis/model/annotations.py → fig/model/_annotations.py} +3 -5
- scitex/{vis/model/axes.py → fig/model/_axes.py} +2 -2
- scitex/{vis/model/figure.py → fig/model/_figure.py} +1 -1
- scitex/{vis/model/guides.py → fig/model/_guides.py} +2 -2
- scitex/{vis/model/plot.py → fig/model/_plot.py} +3 -5
- scitex/{vis/model/plot_types.py → fig/model/_plot_types.py} +0 -0
- scitex/{vis/model/styles.py → fig/model/_styles.py} +1 -1
- scitex/{vis → fig}/utils/__init__.py +3 -3
- scitex/{vis/utils/defaults.py → fig/utils/_defaults.py} +1 -2
- scitex/{vis/utils/validate.py → fig/utils/_validate.py} +3 -9
- scitex/gen/_DimHandler.py +6 -6
- scitex/gen/__init__.py +5 -1
- scitex/gen/_deprecated_close.py +1 -0
- scitex/gen/_deprecated_start.py +5 -3
- scitex/gen/_detect_environment.py +44 -41
- scitex/gen/_detect_notebook_path.py +51 -47
- scitex/gen/_embed.py +1 -1
- scitex/gen/_get_notebook_path.py +81 -62
- scitex/gen/_inspect_module.py +0 -1
- scitex/gen/_norm.py +16 -7
- scitex/gen/_norm_cache.py +78 -65
- scitex/gen/_print_config.py +0 -3
- scitex/gen/_src.py +2 -3
- scitex/gen/_title_case.py +3 -2
- scitex/gen/_to_even.py +8 -8
- scitex/gen/_transpose.py +3 -3
- scitex/gen/misc.py +0 -3
- scitex/gists/_SigMacro_processFigure_S.py +2 -2
- scitex/gists/_SigMacro_toBlue.py +2 -2
- scitex/gists/__init__.py +4 -1
- scitex/git/_branch.py +19 -11
- scitex/git/_clone.py +23 -15
- scitex/git/_commit.py +10 -12
- scitex/git/_init.py +15 -38
- scitex/git/_remote.py +9 -3
- scitex/git/_result.py +3 -0
- scitex/git/_retry.py +2 -5
- scitex/git/_types.py +4 -0
- scitex/git/_validation.py +8 -8
- scitex/git/_workflow.py +4 -4
- scitex/io/__init__.py +12 -27
- scitex/io/_bundle.py +434 -0
- scitex/io/_flush.py +5 -2
- scitex/io/_glob.py +2 -2
- scitex/io/_json2md.py +3 -3
- scitex/io/_load.py +104 -8
- scitex/io/_load_cache.py +71 -71
- scitex/io/_load_configs.py +2 -3
- scitex/io/_load_modules/_H5Explorer.py +11 -14
- scitex/io/_load_modules/_ZarrExplorer.py +3 -3
- scitex/io/_load_modules/_bibtex.py +62 -63
- scitex/io/_load_modules/_canvas.py +6 -11
- scitex/io/_load_modules/_catboost.py +7 -2
- scitex/io/_load_modules/_hdf5.py +2 -0
- scitex/io/_load_modules/_image.py +7 -4
- scitex/io/_load_modules/_matlab.py +3 -1
- scitex/io/_load_modules/_optuna.py +0 -1
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- scitex/scholar/url_finder/translators/individual/oxford.py +25 -19
- scitex/scholar/url_finder/translators/individual/oxford_dictionaries_premium.py +3 -1
- scitex/scholar/url_finder/translators/individual/ozon_ru.py +3 -1
- scitex/scholar/url_finder/translators/individual/plos.py +9 -12
- scitex/scholar/url_finder/translators/individual/polygon.py +3 -1
- scitex/scholar/url_finder/translators/individual/primo.py +3 -1
- scitex/scholar/url_finder/translators/individual/project_muse.py +3 -1
- scitex/scholar/url_finder/translators/individual/pubfactory_journals.py +3 -1
- scitex/scholar/url_finder/translators/individual/pubmed.py +71 -65
- scitex/scholar/url_finder/translators/individual/pubmed_central.py +8 -6
- scitex/scholar/url_finder/translators/individual/rechtspraak_nl.py +3 -1
- scitex/scholar/url_finder/translators/individual/sage_journals.py +25 -17
- scitex/scholar/url_finder/translators/individual/sciencedirect.py +36 -17
- scitex/scholar/url_finder/translators/individual/semantics_visual_library.py +3 -1
- scitex/scholar/url_finder/translators/individual/silverchair.py +70 -52
- scitex/scholar/url_finder/translators/individual/sora.py +3 -1
- scitex/scholar/url_finder/translators/individual/springer.py +15 -11
- scitex/scholar/url_finder/translators/individual/ssrn.py +3 -3
- scitex/scholar/url_finder/translators/individual/stanford_encyclopedia_of_philosophy.py +3 -1
- scitex/scholar/url_finder/translators/individual/superlib.py +3 -1
- scitex/scholar/url_finder/translators/individual/treesearch.py +3 -1
- scitex/scholar/url_finder/translators/individual/university_of_chicago_press_books.py +3 -1
- scitex/scholar/url_finder/translators/individual/vlex.py +3 -1
- scitex/scholar/url_finder/translators/individual/web_of_science.py +3 -1
- scitex/scholar/url_finder/translators/individual/web_of_science_nextgen.py +3 -1
- scitex/scholar/url_finder/translators/individual/wiley.py +31 -25
- scitex/scholar/url_finder/translators/individual/wilson_center_digital_archive.py +3 -1
- scitex/scholar/utils/bibtex/_parse_bibtex.py +3 -3
- scitex/scholar/utils/cleanup/_cleanup_scholar_processes.py +5 -9
- scitex/scholar/utils/text/_TextNormalizer.py +249 -176
- scitex/scholar/utils/validation/DOIValidator.py +31 -28
- scitex/scholar/utils/validation/__init__.py +0 -0
- scitex/scholar/utils/validation/validate_library_dois.py +61 -57
- scitex/scholar/zotero/__init__.py +1 -1
- scitex/security/cli.py +7 -20
- scitex/security/github.py +45 -32
- scitex/session/__init__.py +8 -9
- scitex/session/_decorator.py +49 -42
- scitex/session/_lifecycle.py +39 -39
- scitex/session/_manager.py +24 -20
- scitex/sh/__init__.py +4 -3
- scitex/sh/_execute.py +10 -7
- scitex/sh/_security.py +3 -3
- scitex/sh/_types.py +2 -3
- scitex/stats/__init__.py +174 -6
- scitex/stats/_schema.py +42 -569
- scitex/stats/auto/__init__.py +188 -0
- scitex/stats/auto/_context.py +331 -0
- scitex/stats/auto/_formatting.py +679 -0
- scitex/stats/auto/_rules.py +901 -0
- scitex/stats/auto/_selector.py +554 -0
- scitex/stats/auto/_styles.py +721 -0
- scitex/stats/correct/__init__.py +4 -4
- scitex/stats/correct/_correct_bonferroni.py +43 -34
- scitex/stats/correct/_correct_fdr.py +14 -40
- scitex/stats/correct/_correct_fdr_.py +39 -46
- scitex/stats/correct/_correct_holm.py +14 -32
- scitex/stats/correct/_correct_sidak.py +36 -21
- scitex/stats/descriptive/_circular.py +20 -21
- scitex/stats/descriptive/_describe.py +19 -5
- scitex/stats/descriptive/_nan.py +5 -7
- scitex/stats/descriptive/_real.py +4 -3
- scitex/stats/effect_sizes/__init__.py +10 -11
- scitex/stats/effect_sizes/_cliffs_delta.py +35 -32
- scitex/stats/effect_sizes/_cohens_d.py +30 -31
- scitex/stats/effect_sizes/_epsilon_squared.py +19 -22
- scitex/stats/effect_sizes/_eta_squared.py +23 -27
- scitex/stats/effect_sizes/_prob_superiority.py +18 -21
- scitex/stats/io/__init__.py +29 -0
- scitex/stats/io/_bundle.py +156 -0
- scitex/stats/posthoc/__init__.py +3 -3
- scitex/stats/posthoc/_dunnett.py +75 -55
- scitex/stats/posthoc/_games_howell.py +61 -43
- scitex/stats/posthoc/_tukey_hsd.py +42 -34
- scitex/stats/power/__init__.py +2 -2
- scitex/stats/power/_power.py +56 -56
- scitex/stats/tests/__init__.py +1 -1
- scitex/stats/tests/correlation/__init__.py +1 -1
- scitex/stats/tests/correlation/_test_pearson.py +28 -38
- scitex/stats/utils/__init__.py +14 -17
- scitex/stats/utils/_effect_size.py +85 -78
- scitex/stats/utils/_formatters.py +49 -43
- scitex/stats/utils/_normalizers.py +7 -14
- scitex/stats/utils/_power.py +56 -56
- scitex/str/__init__.py +1 -0
- scitex/str/_clean_path.py +3 -3
- scitex/str/_factor_out_digits.py +86 -58
- scitex/str/_format_plot_text.py +180 -111
- scitex/str/_latex.py +19 -19
- scitex/str/_latex_fallback.py +9 -10
- scitex/str/_parse.py +3 -6
- scitex/str/_print_debug.py +13 -13
- scitex/str/_printc.py +2 -0
- scitex/str/_search.py +3 -3
- scitex/template/.legacy/_clone_project.py +9 -13
- scitex/template/__init__.py +10 -2
- scitex/template/_clone_project.py +7 -2
- scitex/template/_copy.py +1 -0
- scitex/template/_customize.py +3 -6
- scitex/template/_git_strategy.py +2 -3
- scitex/template/_rename.py +1 -0
- scitex/template/clone_pip_project.py +6 -7
- scitex/template/clone_research.py +7 -10
- scitex/template/clone_singularity.py +6 -7
- scitex/template/clone_writer_directory.py +6 -7
- scitex/tex/__init__.py +4 -0
- scitex/tex/_export.py +890 -0
- scitex/tex/_preview.py +26 -11
- scitex/tex/_to_vec.py +10 -7
- scitex/torch/__init__.py +11 -1
- scitex/types/_ArrayLike.py +2 -0
- scitex/types/_is_listed_X.py +3 -3
- scitex/units.py +110 -77
- scitex/utils/_compress_hdf5.py +3 -3
- scitex/utils/_email.py +8 -4
- scitex/utils/_notify.py +14 -8
- scitex/utils/_search.py +6 -6
- scitex/utils/_verify_scitex_format.py +17 -42
- scitex/utils/_verify_scitex_format_v01.py +12 -34
- scitex/utils/template.py +4 -3
- scitex/web/__init__.py +7 -1
- scitex/web/_scraping.py +54 -38
- scitex/web/_search_pubmed.py +30 -14
- scitex/writer/.legacy/Writer_v01-refactored.py +4 -4
- scitex/writer/.legacy/_compile.py +18 -28
- scitex/writer/Writer.py +8 -21
- scitex/writer/__init__.py +11 -11
- scitex/writer/_clone_writer_project.py +2 -6
- scitex/writer/_compile/__init__.py +1 -0
- scitex/writer/_compile/_parser.py +1 -0
- scitex/writer/_compile/_runner.py +35 -38
- scitex/writer/_compile/_validator.py +1 -0
- scitex/writer/_compile/manuscript.py +1 -0
- scitex/writer/_compile/revision.py +1 -0
- scitex/writer/_compile/supplementary.py +1 -0
- scitex/writer/_compile_async.py +5 -12
- scitex/writer/_project/__init__.py +1 -0
- scitex/writer/_project/_create.py +10 -25
- scitex/writer/_project/_trees.py +4 -9
- scitex/writer/_project/_validate.py +2 -3
- scitex/writer/_validate_tree_structures.py +7 -18
- scitex/writer/dataclasses/__init__.py +8 -10
- scitex/writer/dataclasses/config/_CONSTANTS.py +2 -3
- scitex/writer/dataclasses/config/_WriterConfig.py +4 -9
- scitex/writer/dataclasses/contents/_ManuscriptContents.py +14 -25
- scitex/writer/dataclasses/contents/_RevisionContents.py +21 -16
- scitex/writer/dataclasses/contents/_SupplementaryContents.py +21 -24
- scitex/writer/dataclasses/core/_Document.py +2 -3
- scitex/writer/dataclasses/core/_DocumentSection.py +8 -23
- scitex/writer/dataclasses/results/_CompilationResult.py +2 -3
- scitex/writer/dataclasses/results/_LaTeXIssue.py +3 -6
- scitex/writer/dataclasses/results/_SaveSectionsResponse.py +20 -9
- scitex/writer/dataclasses/results/_SectionReadResponse.py +24 -10
- scitex/writer/dataclasses/tree/_ConfigTree.py +7 -4
- scitex/writer/dataclasses/tree/_ManuscriptTree.py +10 -13
- scitex/writer/dataclasses/tree/_RevisionTree.py +16 -17
- scitex/writer/dataclasses/tree/_ScriptsTree.py +10 -5
- scitex/writer/dataclasses/tree/_SharedTree.py +10 -13
- scitex/writer/dataclasses/tree/_SupplementaryTree.py +15 -14
- scitex/writer/utils/.legacy_git_retry.py +3 -8
- scitex/writer/utils/_parse_latex_logs.py +2 -3
- scitex/writer/utils/_parse_script_args.py +20 -23
- scitex/writer/utils/_watch.py +5 -5
- {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/METADATA +14 -10
- {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/RECORD +1149 -985
- scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin_v01-indentation-issues.py +0 -583
- scitex/io/memo.md +0 -2827
- scitex/plt/_subplots/TODO.md +0 -53
- scitex/plt/_subplots/_AxisWrapperMixins/_AdjustmentMixin.py +0 -537
- scitex/plt/_subplots/_AxisWrapperMixins/_MatplotlibPlotMixin.py +0 -1499
- scitex/plt/_subplots/_AxisWrapperMixins/_SeabornMixin.py +0 -431
- scitex/plt/_subplots/_export_as_csv_formatters.py +0 -112
- scitex/vis/__init__.py +0 -177
- scitex/vis/editor/_defaults.py +0 -244
- scitex/vis/editor/_edit.py +0 -378
- scitex/vis/editor/flask_editor/__init__.py +0 -21
- scitex/vis/editor/flask_editor/bbox.py +0 -216
- scitex/vis/editor/flask_editor/core.py +0 -152
- scitex/vis/editor/flask_editor/plotter.py +0 -130
- scitex/vis/editor/flask_editor/renderer.py +0 -184
- scitex/vis/editor/flask_editor/templates/html.py +0 -295
- scitex/vis/editor/flask_editor/templates/scripts.py +0 -614
- scitex/vis/editor/flask_editor/templates/styles.py +0 -549
- /scitex/{vis → fig}/README.md +0 -0
- /scitex/{vis → fig}/docs/CANVAS_ARCHITECTURE.md +0 -0
- {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/WHEEL +0 -0
- {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/entry_points.txt +0 -0
- {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/licenses/LICENSE +0 -0
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def detect_web(self, doc: BeautifulSoup, url: str) -> str:
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def do_web(self, doc: BeautifulSoup, url: str) -> Dict[str, Any]:
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"""Extract article data using embedded metadata."""
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# ISSN
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# Language
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# Keywords
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# PDF URL
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{
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"url": pdf_url,
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"title": "Full Text PDF",
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"mimeType": "application/pdf",
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}
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)
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return item
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def _post_process(self, doc: BeautifulSoup, item: Dict[str, Any]):
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"""Post-process to add abstract if not in embedded metadata."""
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if not item.get(
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abstract_elem = doc.select_one(
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item["abstractNote"] = abstract_elem.get_text().strip()
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@@ -34,16 +34,16 @@ class ChamplainSocietyCollectionTranslator:
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"lastUpdated": "2021-12-28 04:41:28",
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def detect_web(self, doc: BeautifulSoup, url: str) -> str:
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return
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@@ -61,25 +61,25 @@ class ChamplainSocietyCollectionTranslator:
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Dictionary containing book metadata
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"""
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}
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field_value = value_cell[1].get_text().strip()
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# Normalize French to English
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@@ -87,84 +87,86 @@ class ChamplainSocietyCollectionTranslator:
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87
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data_tags[field_title] = field_value
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# Process authors
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if
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if
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if "Author:" in data_tags:
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author_text = data_tags["Author:"]
|
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if "; " in author_text:
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authors = author_text.split("; ")
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|
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96
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|
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if
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|
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+
if ", " in author:
|
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parts = author.split(", ", 1)
|
|
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|
+
first_name = parts[1] if len(parts) > 1 else ""
|
|
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last_name = parts[0]
|
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item[
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|
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item["creators"].append(
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{
|
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+
"firstName": first_name,
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"lastName": last_name,
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"creatorType": "author",
|
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+
}
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+
)
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item[
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-
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|
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})
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+
item["creators"].append(
|
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{"lastName": author, "creatorType": "author", "fieldMode": True}
|
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+
)
|
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# Process published information
|
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|
-
if
|
|
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|
-
published = data_tags[
|
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116
|
+
if "Published:" in data_tags:
|
|
117
|
+
published = data_tags["Published:"]
|
|
118
118
|
|
|
119
119
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# Extract place
|
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|
-
if
|
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|
-
place_end = published.index(
|
|
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|
-
item[
|
|
123
|
-
remainder = published[place_end + 2:]
|
|
120
|
+
if ": " in published:
|
|
121
|
+
place_end = published.index(": ")
|
|
122
|
+
item["place"] = published[:place_end]
|
|
123
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+
remainder = published[place_end + 2 :]
|
|
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124
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125
|
# Extract date and publisher
|
|
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|
-
if
|
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|
-
date_start = remainder.rfind(
|
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|
-
item[
|
|
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|
-
item[
|
|
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|
+
if ", " in remainder:
|
|
127
|
+
date_start = remainder.rfind(", ")
|
|
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|
+
item["date"] = remainder[date_start + 2 :]
|
|
129
|
+
item["publisher"] = remainder[:date_start]
|
|
130
130
|
else:
|
|
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|
-
item[
|
|
131
|
+
item["publisher"] = remainder
|
|
132
132
|
|
|
133
133
|
# Process subjects/tags
|
|
134
|
-
if
|
|
135
|
-
subjects = data_tags[
|
|
134
|
+
if "Subjects:" in data_tags:
|
|
135
|
+
subjects = data_tags["Subjects:"].split("\n")
|
|
136
136
|
for subject in subjects:
|
|
137
137
|
subject = subject.strip()
|
|
138
|
-
if subject and re.search(r
|
|
139
|
-
item[
|
|
138
|
+
if subject and re.search(r"\w", subject):
|
|
139
|
+
item["tags"].append({"tag": subject})
|
|
140
140
|
|
|
141
141
|
# Other fields
|
|
142
|
-
self._associate_data(item, data_tags,
|
|
143
|
-
self._associate_data(item, data_tags,
|
|
144
|
-
self._associate_data(item, data_tags,
|
|
142
|
+
self._associate_data(item, data_tags, "Extent:", "pages")
|
|
143
|
+
self._associate_data(item, data_tags, "ID:", "callNumber")
|
|
144
|
+
self._associate_data(item, data_tags, "Notes:", "abstractNote")
|
|
145
145
|
|
|
146
146
|
# Title
|
|
147
|
-
if
|
|
148
|
-
item[
|
|
147
|
+
if "Title:" in data_tags:
|
|
148
|
+
item["title"] = data_tags["Title:"]
|
|
149
149
|
elif doc.title:
|
|
150
|
-
item[
|
|
150
|
+
item["title"] = doc.title.string
|
|
151
151
|
else:
|
|
152
|
-
item[
|
|
152
|
+
item["title"] = "No Title Found: Champlain Collection"
|
|
153
153
|
|
|
154
154
|
return item
|
|
155
155
|
|
|
156
156
|
def _normalize_field_name(self, field_name: str) -> str:
|
|
157
157
|
"""Normalize French field names to English."""
|
|
158
158
|
mapping = {
|
|
159
|
-
|
|
160
|
-
|
|
161
|
-
|
|
162
|
-
|
|
163
|
-
|
|
159
|
+
"Auteur:": "Author:",
|
|
160
|
+
"Titre:": "Title:",
|
|
161
|
+
"Description:": "Extent:",
|
|
162
|
+
"Éditeur:": "Published:",
|
|
163
|
+
"Sujet:": "Subjects:",
|
|
164
164
|
}
|
|
165
165
|
return mapping.get(field_name, field_name)
|
|
166
166
|
|
|
167
|
-
def _associate_data(
|
|
167
|
+
def _associate_data(
|
|
168
|
+
self, item: Dict, data_tags: Dict, field: str, zotero_field: str
|
|
169
|
+
):
|
|
168
170
|
"""Associate data from tags to item."""
|
|
169
171
|
if field in data_tags:
|
|
170
172
|
item[zotero_field] = data_tags[field]
|
scitex/scholar/url_finder/translators/individual/Chicago_Journal_of_Theoretical_Computer_Science.py
CHANGED
|
@@ -34,11 +34,15 @@ class ChicagoJournalOfTheoreticalComputerScienceTranslator:
|
|
|
34
34
|
"inRepository": True,
|
|
35
35
|
"translatorType": 4,
|
|
36
36
|
"browserSupport": "gcsibv",
|
|
37
|
-
"lastUpdated": "2025-05-14 00:10:19"
|
|
37
|
+
"lastUpdated": "2025-05-14 00:10:19",
|
|
38
38
|
}
|
|
39
39
|
|
|
40
|
-
SINGLE_RE = re.compile(
|
|
41
|
-
|
|
40
|
+
SINGLE_RE = re.compile(
|
|
41
|
+
r"^https?://cjtcs\.cs\.uchicago\.edu/articles/\w+/\d+/contents\.html"
|
|
42
|
+
)
|
|
43
|
+
MULTIPLE_RE = re.compile(
|
|
44
|
+
r"^https?://cjtcs\.cs\.uchicago\.edu/articles/\w+/contents\.html"
|
|
45
|
+
)
|
|
42
46
|
|
|
43
47
|
def detect_web(self, doc: BeautifulSoup, url: str) -> str:
|
|
44
48
|
"""Detect if page is an article or volume contents."""
|
|
@@ -46,17 +50,21 @@ class ChicagoJournalOfTheoreticalComputerScienceTranslator:
|
|
|
46
50
|
# Check for article links
|
|
47
51
|
article_links = doc.select('ul > li > ul > li a[href*="contents.html"]')
|
|
48
52
|
if article_links:
|
|
49
|
-
return
|
|
53
|
+
return "multiple"
|
|
50
54
|
elif self.SINGLE_RE.match(url):
|
|
51
|
-
return
|
|
55
|
+
return "journalArticle"
|
|
52
56
|
|
|
53
|
-
return
|
|
57
|
+
return ""
|
|
54
58
|
|
|
55
|
-
async def do_web(
|
|
59
|
+
async def do_web(
|
|
60
|
+
self, doc: BeautifulSoup, url: str, request_text_func
|
|
61
|
+
) -> Dict[str, Any]:
|
|
56
62
|
"""Extract article data."""
|
|
57
63
|
return await self.scrape(doc, url, request_text_func)
|
|
58
64
|
|
|
59
|
-
async def scrape(
|
|
65
|
+
async def scrape(
|
|
66
|
+
self, doc: BeautifulSoup, url: str, request_text_func
|
|
67
|
+
) -> Dict[str, Any]:
|
|
60
68
|
"""
|
|
61
69
|
Scrape article data by fetching and parsing BibTeX.
|
|
62
70
|
|
|
@@ -69,18 +77,18 @@ class ChicagoJournalOfTheoreticalComputerScienceTranslator:
|
|
|
69
77
|
Dictionary containing article metadata
|
|
70
78
|
"""
|
|
71
79
|
item = {
|
|
72
|
-
|
|
73
|
-
|
|
74
|
-
|
|
75
|
-
|
|
80
|
+
"itemType": "journalArticle",
|
|
81
|
+
"creators": [],
|
|
82
|
+
"tags": [],
|
|
83
|
+
"attachments": [],
|
|
76
84
|
}
|
|
77
85
|
|
|
78
86
|
# Find BibTeX link
|
|
79
87
|
bib_link = doc.select_one('a[href$=".bib"]')
|
|
80
|
-
if bib_link and bib_link.get(
|
|
81
|
-
bib_url = bib_link[
|
|
82
|
-
if not bib_url.startswith(
|
|
83
|
-
bib_url =
|
|
88
|
+
if bib_link and bib_link.get("href"):
|
|
89
|
+
bib_url = bib_link["href"]
|
|
90
|
+
if not bib_url.startswith("http"):
|
|
91
|
+
bib_url = "http://cjtcs.cs.uchicago.edu" + bib_url
|
|
84
92
|
|
|
85
93
|
# Fetch BibTeX
|
|
86
94
|
bib_text = await request_text_func(bib_url)
|
|
@@ -92,103 +100,111 @@ class ChicagoJournalOfTheoreticalComputerScienceTranslator:
|
|
|
92
100
|
|
|
93
101
|
# Extract DOI
|
|
94
102
|
doi_link = doc.select_one('a[href*="dx.doi.org"]')
|
|
95
|
-
if doi_link and doi_link.get(
|
|
96
|
-
doi_url = doi_link[
|
|
97
|
-
item[
|
|
103
|
+
if doi_link and doi_link.get("href"):
|
|
104
|
+
doi_url = doi_link["href"]
|
|
105
|
+
item["DOI"] = re.sub(r"https?://(?:dx\.)?doi\.org/", "", doi_url)
|
|
98
106
|
|
|
99
107
|
# Add PDF attachment if available
|
|
100
108
|
pdf_link = doc.select_one('a[href$=".pdf"]')
|
|
101
|
-
if pdf_link and pdf_link.get(
|
|
102
|
-
pdf_url = pdf_link[
|
|
103
|
-
if not pdf_url.startswith(
|
|
104
|
-
pdf_url =
|
|
105
|
-
item[
|
|
106
|
-
|
|
107
|
-
|
|
108
|
-
|
|
109
|
-
|
|
109
|
+
if pdf_link and pdf_link.get("href"):
|
|
110
|
+
pdf_url = pdf_link["href"]
|
|
111
|
+
if not pdf_url.startswith("http"):
|
|
112
|
+
pdf_url = "http://cjtcs.cs.uchicago.edu" + pdf_url
|
|
113
|
+
item["attachments"].append(
|
|
114
|
+
{
|
|
115
|
+
"url": pdf_url,
|
|
116
|
+
"title": "Full Text PDF",
|
|
117
|
+
"mimeType": "application/pdf",
|
|
118
|
+
}
|
|
119
|
+
)
|
|
110
120
|
else:
|
|
111
121
|
# Add snapshot if no PDF
|
|
112
|
-
item[
|
|
113
|
-
|
|
114
|
-
|
|
115
|
-
'url': url
|
|
116
|
-
})
|
|
122
|
+
item["attachments"].append(
|
|
123
|
+
{"title": "Snapshot", "mimeType": "text/html", "url": url}
|
|
124
|
+
)
|
|
117
125
|
|
|
118
126
|
return item
|
|
119
127
|
|
|
120
128
|
def _fix_author_line(self, bib_text: str) -> str:
|
|
121
129
|
"""Fix BibTeX author line if missing equals sign."""
|
|
122
|
-
lines = bib_text.split(
|
|
130
|
+
lines = bib_text.split("\n")
|
|
123
131
|
fixed_lines = []
|
|
124
132
|
for line in lines:
|
|
125
133
|
# Add equals sign after "author" if missing
|
|
126
|
-
fixed_line = re.sub(r
|
|
134
|
+
fixed_line = re.sub(r"^(\s*author)(?!\s*=)", r"\1=", line)
|
|
127
135
|
fixed_lines.append(fixed_line)
|
|
128
|
-
return
|
|
136
|
+
return "\n".join(fixed_lines)
|
|
129
137
|
|
|
130
138
|
def _parse_bibtex(self, bib_text: str, item: Dict[str, Any]):
|
|
131
139
|
"""Parse BibTeX and fill item fields."""
|
|
132
140
|
# Simple BibTeX parser
|
|
133
141
|
# Extract title
|
|
134
|
-
title_match = re.search(
|
|
142
|
+
title_match = re.search(
|
|
143
|
+
r'title\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE | re.DOTALL
|
|
144
|
+
)
|
|
135
145
|
if title_match:
|
|
136
|
-
item[
|
|
146
|
+
item["title"] = title_match.group(1).strip()
|
|
137
147
|
|
|
138
148
|
# Extract authors
|
|
139
|
-
author_match = re.search(
|
|
149
|
+
author_match = re.search(
|
|
150
|
+
r'author\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE | re.DOTALL
|
|
151
|
+
)
|
|
140
152
|
if author_match:
|
|
141
153
|
authors = author_match.group(1).strip()
|
|
142
154
|
# Split by 'and'
|
|
143
|
-
for author in authors.split(
|
|
155
|
+
for author in authors.split(" and "):
|
|
144
156
|
author = author.strip()
|
|
145
157
|
if author:
|
|
146
|
-
item[
|
|
158
|
+
item["creators"].append(self._parse_author(author))
|
|
147
159
|
|
|
148
160
|
# Extract year/date
|
|
149
161
|
year_match = re.search(r'year\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE)
|
|
150
162
|
if year_match:
|
|
151
|
-
item[
|
|
163
|
+
item["date"] = year_match.group(1).strip()
|
|
152
164
|
|
|
153
165
|
# Extract volume
|
|
154
166
|
volume_match = re.search(r'volume\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE)
|
|
155
167
|
if volume_match:
|
|
156
|
-
item[
|
|
168
|
+
item["volume"] = volume_match.group(1).strip()
|
|
157
169
|
|
|
158
170
|
# Extract issue/number
|
|
159
|
-
issue_match = re.search(
|
|
171
|
+
issue_match = re.search(
|
|
172
|
+
r'(?:issue|number)\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE
|
|
173
|
+
)
|
|
160
174
|
if issue_match:
|
|
161
|
-
item[
|
|
175
|
+
item["issue"] = issue_match.group(1).strip()
|
|
162
176
|
|
|
163
177
|
# Extract journal
|
|
164
|
-
journal_match = re.search(
|
|
178
|
+
journal_match = re.search(
|
|
179
|
+
r'journal\s*=\s*[{"](.*?)[}"]', bib_text, re.IGNORECASE
|
|
180
|
+
)
|
|
165
181
|
if journal_match:
|
|
166
|
-
item[
|
|
182
|
+
item["publicationTitle"] = journal_match.group(1).strip()
|
|
167
183
|
|
|
168
184
|
def _parse_author(self, author_str: str) -> Dict[str, Any]:
|
|
169
185
|
"""Parse author name from BibTeX format."""
|
|
170
186
|
author_str = author_str.strip()
|
|
171
187
|
|
|
172
188
|
# Handle "Last, First" format
|
|
173
|
-
if
|
|
174
|
-
parts = author_str.split(
|
|
189
|
+
if "," in author_str:
|
|
190
|
+
parts = author_str.split(",", 1)
|
|
175
191
|
return {
|
|
176
|
-
|
|
177
|
-
|
|
178
|
-
|
|
192
|
+
"firstName": parts[1].strip() if len(parts) > 1 else "",
|
|
193
|
+
"lastName": parts[0].strip(),
|
|
194
|
+
"creatorType": "author",
|
|
179
195
|
}
|
|
180
196
|
else:
|
|
181
197
|
# Handle "First Last" format
|
|
182
198
|
parts = author_str.split()
|
|
183
199
|
if len(parts) >= 2:
|
|
184
200
|
return {
|
|
185
|
-
|
|
186
|
-
|
|
187
|
-
|
|
201
|
+
"firstName": " ".join(parts[:-1]),
|
|
202
|
+
"lastName": parts[-1],
|
|
203
|
+
"creatorType": "author",
|
|
188
204
|
}
|
|
189
205
|
else:
|
|
190
206
|
return {
|
|
191
|
-
|
|
192
|
-
|
|
193
|
-
|
|
207
|
+
"lastName": author_str,
|
|
208
|
+
"creatorType": "author",
|
|
209
|
+
"fieldMode": True,
|
|
194
210
|
}
|