scitex 2.5.0__py3-none-any.whl → 2.7.3__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1179) hide show
  1. scitex/__init__.py +25 -10
  2. scitex/__main__.py +2 -1
  3. scitex/__version__.py +1 -1
  4. scitex/_optional_deps.py +13 -20
  5. scitex/ai/__init__.py +5 -0
  6. scitex/ai/_gen_ai/_Anthropic.py +3 -1
  7. scitex/ai/_gen_ai/_BaseGenAI.py +3 -2
  8. scitex/ai/_gen_ai/_DeepSeek.py +1 -1
  9. scitex/ai/_gen_ai/_Google.py +3 -2
  10. scitex/ai/_gen_ai/_Llama.py +4 -2
  11. scitex/ai/_gen_ai/_OpenAI.py +3 -1
  12. scitex/ai/_gen_ai/_PARAMS.py +1 -0
  13. scitex/ai/_gen_ai/_Perplexity.py +3 -1
  14. scitex/ai/_gen_ai/__init__.py +1 -0
  15. scitex/ai/_gen_ai/_format_output_func.py +3 -1
  16. scitex/ai/classification/CrossValidationExperiment.py +8 -14
  17. scitex/ai/classification/examples/timeseries_cv_demo.py +128 -112
  18. scitex/ai/classification/reporters/_BaseClassificationReporter.py +2 -0
  19. scitex/ai/classification/reporters/_ClassificationReporter.py +30 -45
  20. scitex/ai/classification/reporters/_MultiClassificationReporter.py +8 -11
  21. scitex/ai/classification/reporters/_SingleClassificationReporter.py +126 -182
  22. scitex/ai/classification/reporters/__init__.py +1 -1
  23. scitex/ai/classification/reporters/reporter_utils/_Plotter.py +213 -119
  24. scitex/ai/classification/reporters/reporter_utils/__init__.py +28 -36
  25. scitex/ai/classification/reporters/reporter_utils/aggregation.py +125 -143
  26. scitex/ai/classification/reporters/reporter_utils/data_models.py +128 -120
  27. scitex/ai/classification/reporters/reporter_utils/reporting.py +507 -340
  28. scitex/ai/classification/reporters/reporter_utils/storage.py +4 -1
  29. scitex/ai/classification/reporters/reporter_utils/validation.py +141 -154
  30. scitex/ai/classification/timeseries/_TimeSeriesBlockingSplit.py +204 -129
  31. scitex/ai/classification/timeseries/_TimeSeriesCalendarSplit.py +215 -171
  32. scitex/ai/classification/timeseries/_TimeSeriesMetadata.py +17 -17
  33. scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit.py +67 -143
  34. scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit_v01-not-using-n_splits.py +67 -143
  35. scitex/ai/classification/timeseries/_TimeSeriesStrategy.py +12 -13
  36. scitex/ai/classification/timeseries/_TimeSeriesStratifiedSplit.py +231 -144
  37. scitex/ai/classification/timeseries/__init__.py +2 -4
  38. scitex/ai/classification/timeseries/_normalize_timestamp.py +3 -0
  39. scitex/ai/clustering/_pca.py +0 -1
  40. scitex/ai/clustering/_umap.py +1 -2
  41. scitex/ai/feature_extraction/__init__.py +10 -8
  42. scitex/ai/feature_extraction/vit.py +0 -1
  43. scitex/ai/feature_selection/feature_selection.py +3 -8
  44. scitex/ai/metrics/_calc_conf_mat.py +2 -0
  45. scitex/ai/metrics/_calc_feature_importance.py +3 -7
  46. scitex/ai/metrics/_calc_pre_rec_auc.py +5 -5
  47. scitex/ai/metrics/_calc_roc_auc.py +4 -2
  48. scitex/ai/metrics/_calc_seizure_prediction_metrics.py +35 -20
  49. scitex/ai/metrics/_calc_silhouette_score.py +1 -3
  50. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger.py +0 -3
  51. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger2020.py +0 -3
  52. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger913A.py +0 -3
  53. scitex/ai/optim/_optimizers.py +1 -1
  54. scitex/ai/plt/__init__.py +6 -1
  55. scitex/ai/plt/_plot_feature_importance.py +1 -3
  56. scitex/ai/plt/_plot_learning_curve.py +9 -24
  57. scitex/ai/plt/_plot_optuna_study.py +4 -3
  58. scitex/ai/plt/_plot_pre_rec_curve.py +9 -15
  59. scitex/ai/plt/_plot_roc_curve.py +6 -8
  60. scitex/ai/plt/_stx_conf_mat.py +121 -122
  61. scitex/ai/sampling/undersample.py +3 -2
  62. scitex/ai/sklearn/__init__.py +2 -2
  63. scitex/ai/training/_LearningCurveLogger.py +23 -10
  64. scitex/ai/utils/_check_params.py +0 -1
  65. scitex/audio/README.md +52 -0
  66. scitex/audio/__init__.py +384 -0
  67. scitex/audio/__main__.py +129 -0
  68. scitex/audio/_tts.py +334 -0
  69. scitex/audio/engines/__init__.py +44 -0
  70. scitex/audio/engines/base.py +275 -0
  71. scitex/audio/engines/elevenlabs_engine.py +143 -0
  72. scitex/audio/engines/gtts_engine.py +162 -0
  73. scitex/audio/engines/pyttsx3_engine.py +131 -0
  74. scitex/audio/mcp_server.py +757 -0
  75. scitex/benchmark/__init__.py +15 -25
  76. scitex/benchmark/benchmark.py +124 -117
  77. scitex/benchmark/monitor.py +117 -107
  78. scitex/benchmark/profiler.py +61 -58
  79. scitex/bridge/__init__.py +110 -0
  80. scitex/bridge/_helpers.py +149 -0
  81. scitex/bridge/_plt_vis.py +529 -0
  82. scitex/bridge/_protocol.py +283 -0
  83. scitex/bridge/_stats_plt.py +261 -0
  84. scitex/bridge/_stats_vis.py +265 -0
  85. scitex/browser/__init__.py +0 -2
  86. scitex/browser/auth/__init__.py +0 -0
  87. scitex/browser/auth/google.py +16 -11
  88. scitex/browser/automation/CookieHandler.py +2 -3
  89. scitex/browser/collaboration/__init__.py +3 -0
  90. scitex/browser/collaboration/auth_helpers.py +3 -1
  91. scitex/browser/collaboration/collaborative_agent.py +2 -0
  92. scitex/browser/collaboration/interactive_panel.py +2 -2
  93. scitex/browser/collaboration/shared_session.py +20 -11
  94. scitex/browser/collaboration/standard_interactions.py +1 -0
  95. scitex/browser/core/BrowserMixin.py +12 -30
  96. scitex/browser/core/ChromeProfileManager.py +9 -24
  97. scitex/browser/debugging/_browser_logger.py +15 -25
  98. scitex/browser/debugging/_failure_capture.py +9 -2
  99. scitex/browser/debugging/_highlight_element.py +15 -6
  100. scitex/browser/debugging/_show_grid.py +5 -6
  101. scitex/browser/debugging/_sync_session.py +4 -3
  102. scitex/browser/debugging/_test_monitor.py +14 -5
  103. scitex/browser/debugging/_visual_cursor.py +46 -35
  104. scitex/browser/interaction/click_center.py +4 -3
  105. scitex/browser/interaction/click_with_fallbacks.py +7 -10
  106. scitex/browser/interaction/close_popups.py +79 -66
  107. scitex/browser/interaction/fill_with_fallbacks.py +8 -8
  108. scitex/browser/pdf/__init__.py +3 -1
  109. scitex/browser/pdf/click_download_for_chrome_pdf_viewer.py +11 -10
  110. scitex/browser/pdf/detect_chrome_pdf_viewer.py +3 -6
  111. scitex/browser/remote/CaptchaHandler.py +109 -96
  112. scitex/browser/remote/ZenRowsAPIClient.py +91 -97
  113. scitex/browser/remote/ZenRowsBrowserManager.py +138 -112
  114. scitex/browser/stealth/HumanBehavior.py +4 -9
  115. scitex/browser/stealth/StealthManager.py +11 -26
  116. scitex/capture/__init__.py +17 -17
  117. scitex/capture/__main__.py +2 -3
  118. scitex/capture/capture.py +23 -51
  119. scitex/capture/cli.py +14 -39
  120. scitex/capture/gif.py +5 -9
  121. scitex/capture/mcp_server.py +7 -20
  122. scitex/capture/session.py +4 -3
  123. scitex/capture/utils.py +18 -53
  124. scitex/cli/__init__.py +1 -1
  125. scitex/cli/cloud.py +158 -116
  126. scitex/cli/config.py +224 -0
  127. scitex/cli/main.py +41 -40
  128. scitex/cli/scholar.py +60 -27
  129. scitex/cli/security.py +14 -20
  130. scitex/cli/web.py +87 -90
  131. scitex/cli/writer.py +51 -45
  132. scitex/cloud/__init__.py +14 -11
  133. scitex/cloud/_matplotlib_hook.py +6 -6
  134. scitex/config/README.md +313 -0
  135. scitex/config/{PriorityConfig.py → _PriorityConfig.py} +114 -17
  136. scitex/config/_ScitexConfig.py +319 -0
  137. scitex/config/__init__.py +41 -9
  138. scitex/config/_paths.py +325 -0
  139. scitex/config/default.yaml +81 -0
  140. scitex/context/_suppress_output.py +2 -3
  141. scitex/db/_BaseMixins/_BaseBackupMixin.py +3 -1
  142. scitex/db/_BaseMixins/_BaseBatchMixin.py +3 -1
  143. scitex/db/_BaseMixins/_BaseBlobMixin.py +3 -1
  144. scitex/db/_BaseMixins/_BaseImportExportMixin.py +1 -3
  145. scitex/db/_BaseMixins/_BaseIndexMixin.py +3 -1
  146. scitex/db/_BaseMixins/_BaseMaintenanceMixin.py +1 -3
  147. scitex/db/_BaseMixins/_BaseQueryMixin.py +3 -1
  148. scitex/db/_BaseMixins/_BaseRowMixin.py +3 -1
  149. scitex/db/_BaseMixins/_BaseTableMixin.py +3 -1
  150. scitex/db/_BaseMixins/_BaseTransactionMixin.py +1 -3
  151. scitex/db/_BaseMixins/__init__.py +1 -1
  152. scitex/db/__init__.py +9 -1
  153. scitex/db/__main__.py +8 -21
  154. scitex/db/_check_health.py +15 -31
  155. scitex/db/_delete_duplicates.py +7 -4
  156. scitex/db/_inspect.py +22 -38
  157. scitex/db/_inspect_optimized.py +89 -85
  158. scitex/db/_postgresql/_PostgreSQL.py +0 -1
  159. scitex/db/_postgresql/_PostgreSQLMixins/_BlobMixin.py +3 -1
  160. scitex/db/_postgresql/_PostgreSQLMixins/_ConnectionMixin.py +1 -3
  161. scitex/db/_postgresql/_PostgreSQLMixins/_ImportExportMixin.py +1 -3
  162. scitex/db/_postgresql/_PostgreSQLMixins/_MaintenanceMixin.py +1 -4
  163. scitex/db/_postgresql/_PostgreSQLMixins/_QueryMixin.py +3 -3
  164. scitex/db/_postgresql/_PostgreSQLMixins/_RowMixin.py +3 -1
  165. scitex/db/_postgresql/_PostgreSQLMixins/_TransactionMixin.py +1 -3
  166. scitex/db/_postgresql/__init__.py +1 -1
  167. scitex/db/_sqlite3/_SQLite3.py +2 -4
  168. scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin.py +11 -12
  169. scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin_v01-need-_hash-col.py +19 -14
  170. scitex/db/_sqlite3/_SQLite3Mixins/_BatchMixin.py +3 -1
  171. scitex/db/_sqlite3/_SQLite3Mixins/_BlobMixin.py +7 -7
  172. scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin.py +118 -111
  173. scitex/db/_sqlite3/_SQLite3Mixins/_ConnectionMixin.py +8 -10
  174. scitex/db/_sqlite3/_SQLite3Mixins/_GitMixin.py +17 -45
  175. scitex/db/_sqlite3/_SQLite3Mixins/_ImportExportMixin.py +1 -3
  176. scitex/db/_sqlite3/_SQLite3Mixins/_IndexMixin.py +3 -1
  177. scitex/db/_sqlite3/_SQLite3Mixins/_QueryMixin.py +3 -4
  178. scitex/db/_sqlite3/_SQLite3Mixins/_RowMixin.py +9 -9
  179. scitex/db/_sqlite3/_SQLite3Mixins/_TableMixin.py +18 -11
  180. scitex/db/_sqlite3/_SQLite3Mixins/__init__.py +1 -0
  181. scitex/db/_sqlite3/__init__.py +1 -1
  182. scitex/db/_sqlite3/_delete_duplicates.py +13 -11
  183. scitex/decorators/__init__.py +29 -4
  184. scitex/decorators/_auto_order.py +43 -43
  185. scitex/decorators/_batch_fn.py +12 -6
  186. scitex/decorators/_cache_disk.py +8 -9
  187. scitex/decorators/_cache_disk_async.py +8 -7
  188. scitex/decorators/_combined.py +19 -13
  189. scitex/decorators/_converters.py +16 -3
  190. scitex/decorators/_deprecated.py +32 -22
  191. scitex/decorators/_numpy_fn.py +18 -4
  192. scitex/decorators/_pandas_fn.py +17 -5
  193. scitex/decorators/_signal_fn.py +17 -3
  194. scitex/decorators/_torch_fn.py +32 -15
  195. scitex/decorators/_xarray_fn.py +23 -9
  196. scitex/dev/_analyze_code_flow.py +0 -2
  197. scitex/dev/plt/__init__.py +272 -0
  198. scitex/dev/plt/plot_mpl_axhline.py +28 -0
  199. scitex/dev/plt/plot_mpl_axhspan.py +28 -0
  200. scitex/dev/plt/plot_mpl_axvline.py +28 -0
  201. scitex/dev/plt/plot_mpl_axvspan.py +28 -0
  202. scitex/dev/plt/plot_mpl_bar.py +29 -0
  203. scitex/dev/plt/plot_mpl_barh.py +29 -0
  204. scitex/dev/plt/plot_mpl_boxplot.py +28 -0
  205. scitex/dev/plt/plot_mpl_contour.py +31 -0
  206. scitex/dev/plt/plot_mpl_contourf.py +31 -0
  207. scitex/dev/plt/plot_mpl_errorbar.py +30 -0
  208. scitex/dev/plt/plot_mpl_eventplot.py +28 -0
  209. scitex/dev/plt/plot_mpl_fill.py +30 -0
  210. scitex/dev/plt/plot_mpl_fill_between.py +31 -0
  211. scitex/dev/plt/plot_mpl_hexbin.py +28 -0
  212. scitex/dev/plt/plot_mpl_hist.py +28 -0
  213. scitex/dev/plt/plot_mpl_hist2d.py +28 -0
  214. scitex/dev/plt/plot_mpl_imshow.py +29 -0
  215. scitex/dev/plt/plot_mpl_pcolormesh.py +31 -0
  216. scitex/dev/plt/plot_mpl_pie.py +29 -0
  217. scitex/dev/plt/plot_mpl_plot.py +29 -0
  218. scitex/dev/plt/plot_mpl_quiver.py +31 -0
  219. scitex/dev/plt/plot_mpl_scatter.py +28 -0
  220. scitex/dev/plt/plot_mpl_stackplot.py +31 -0
  221. scitex/dev/plt/plot_mpl_stem.py +29 -0
  222. scitex/dev/plt/plot_mpl_step.py +29 -0
  223. scitex/dev/plt/plot_mpl_violinplot.py +28 -0
  224. scitex/dev/plt/plot_sns_barplot.py +29 -0
  225. scitex/dev/plt/plot_sns_boxplot.py +29 -0
  226. scitex/dev/plt/plot_sns_heatmap.py +28 -0
  227. scitex/dev/plt/plot_sns_histplot.py +29 -0
  228. scitex/dev/plt/plot_sns_kdeplot.py +29 -0
  229. scitex/dev/plt/plot_sns_lineplot.py +31 -0
  230. scitex/dev/plt/plot_sns_scatterplot.py +29 -0
  231. scitex/dev/plt/plot_sns_stripplot.py +29 -0
  232. scitex/dev/plt/plot_sns_swarmplot.py +29 -0
  233. scitex/dev/plt/plot_sns_violinplot.py +29 -0
  234. scitex/dev/plt/plot_stx_bar.py +29 -0
  235. scitex/dev/plt/plot_stx_barh.py +29 -0
  236. scitex/dev/plt/plot_stx_box.py +28 -0
  237. scitex/dev/plt/plot_stx_boxplot.py +28 -0
  238. scitex/dev/plt/plot_stx_conf_mat.py +28 -0
  239. scitex/dev/plt/plot_stx_contour.py +31 -0
  240. scitex/dev/plt/plot_stx_ecdf.py +28 -0
  241. scitex/dev/plt/plot_stx_errorbar.py +30 -0
  242. scitex/dev/plt/plot_stx_fill_between.py +31 -0
  243. scitex/dev/plt/plot_stx_fillv.py +28 -0
  244. scitex/dev/plt/plot_stx_heatmap.py +28 -0
  245. scitex/dev/plt/plot_stx_image.py +28 -0
  246. scitex/dev/plt/plot_stx_imshow.py +28 -0
  247. scitex/dev/plt/plot_stx_joyplot.py +28 -0
  248. scitex/dev/plt/plot_stx_kde.py +28 -0
  249. scitex/dev/plt/plot_stx_line.py +28 -0
  250. scitex/dev/plt/plot_stx_mean_ci.py +28 -0
  251. scitex/dev/plt/plot_stx_mean_std.py +28 -0
  252. scitex/dev/plt/plot_stx_median_iqr.py +28 -0
  253. scitex/dev/plt/plot_stx_raster.py +28 -0
  254. scitex/dev/plt/plot_stx_rectangle.py +28 -0
  255. scitex/dev/plt/plot_stx_scatter.py +29 -0
  256. scitex/dev/plt/plot_stx_shaded_line.py +29 -0
  257. scitex/dev/plt/plot_stx_violin.py +28 -0
  258. scitex/dev/plt/plot_stx_violinplot.py +28 -0
  259. scitex/dict/_DotDict.py +15 -19
  260. scitex/dict/_flatten.py +1 -0
  261. scitex/dict/_listed_dict.py +1 -0
  262. scitex/dict/_pop_keys.py +1 -0
  263. scitex/dict/_replace.py +1 -0
  264. scitex/dict/_safe_merge.py +1 -0
  265. scitex/dict/_to_str.py +2 -3
  266. scitex/dsp/__init__.py +13 -4
  267. scitex/dsp/_crop.py +3 -1
  268. scitex/dsp/_detect_ripples.py +3 -1
  269. scitex/dsp/_modulation_index.py +3 -1
  270. scitex/dsp/_time.py +3 -1
  271. scitex/dsp/_wavelet.py +0 -1
  272. scitex/dsp/example.py +0 -5
  273. scitex/dsp/filt.py +4 -0
  274. scitex/dsp/utils/__init__.py +4 -1
  275. scitex/dsp/utils/pac.py +3 -3
  276. scitex/dt/_normalize_timestamp.py +4 -1
  277. scitex/errors.py +3 -6
  278. scitex/etc/__init__.py +1 -1
  279. scitex/fig/__init__.py +352 -0
  280. scitex/{vis → fig}/backend/__init__.py +3 -3
  281. scitex/{vis/backend/export.py → fig/backend/_export.py} +1 -1
  282. scitex/{vis/backend/parser.py → fig/backend/_parser.py} +2 -4
  283. scitex/{vis/backend/render.py → fig/backend/_render.py} +1 -1
  284. scitex/{vis → fig}/canvas.py +16 -4
  285. scitex/{vis → fig}/editor/__init__.py +0 -0
  286. scitex/{vis → fig}/editor/_dearpygui_editor.py +450 -304
  287. scitex/fig/editor/_defaults.py +300 -0
  288. scitex/fig/editor/_edit.py +751 -0
  289. scitex/{vis → fig}/editor/_flask_editor.py +8 -8
  290. scitex/{vis → fig}/editor/_mpl_editor.py +63 -48
  291. scitex/{vis → fig}/editor/_qt_editor.py +391 -160
  292. scitex/{vis → fig}/editor/_tkinter_editor.py +146 -89
  293. scitex/fig/editor/flask_editor/__init__.py +21 -0
  294. scitex/fig/editor/flask_editor/_bbox.py +1276 -0
  295. scitex/fig/editor/flask_editor/_core.py +624 -0
  296. scitex/fig/editor/flask_editor/_plotter.py +601 -0
  297. scitex/fig/editor/flask_editor/_renderer.py +739 -0
  298. scitex/{vis/editor/flask_editor/utils.py → fig/editor/flask_editor/_utils.py} +13 -14
  299. scitex/{vis → fig}/editor/flask_editor/templates/__init__.py +6 -6
  300. scitex/fig/editor/flask_editor/templates/_html.py +834 -0
  301. scitex/fig/editor/flask_editor/templates/_scripts.py +3136 -0
  302. scitex/fig/editor/flask_editor/templates/_styles.py +1346 -0
  303. scitex/{vis → fig}/io/__init__.py +18 -6
  304. scitex/fig/io/_bundle.py +973 -0
  305. scitex/{vis/io/canvas.py → fig/io/_canvas.py} +9 -5
  306. scitex/{vis/io/data.py → fig/io/_data.py} +14 -10
  307. scitex/{vis/io/directory.py → fig/io/_directory.py} +7 -4
  308. scitex/{vis/io/export.py → fig/io/_export.py} +16 -13
  309. scitex/{vis/io/load.py → fig/io/_load.py} +2 -2
  310. scitex/{vis/io/panel.py → fig/io/_panel.py} +22 -14
  311. scitex/{vis/io/save.py → fig/io/_save.py} +1 -1
  312. scitex/{vis → fig}/model/__init__.py +8 -8
  313. scitex/{vis/model/annotations.py → fig/model/_annotations.py} +3 -5
  314. scitex/{vis/model/axes.py → fig/model/_axes.py} +2 -2
  315. scitex/{vis/model/figure.py → fig/model/_figure.py} +1 -1
  316. scitex/{vis/model/guides.py → fig/model/_guides.py} +2 -2
  317. scitex/{vis/model/plot.py → fig/model/_plot.py} +3 -5
  318. scitex/{vis/model/plot_types.py → fig/model/_plot_types.py} +0 -0
  319. scitex/{vis/model/styles.py → fig/model/_styles.py} +1 -1
  320. scitex/{vis → fig}/utils/__init__.py +3 -3
  321. scitex/{vis/utils/defaults.py → fig/utils/_defaults.py} +1 -2
  322. scitex/{vis/utils/validate.py → fig/utils/_validate.py} +3 -9
  323. scitex/gen/_DimHandler.py +6 -6
  324. scitex/gen/__init__.py +5 -1
  325. scitex/gen/_deprecated_close.py +1 -0
  326. scitex/gen/_deprecated_start.py +5 -3
  327. scitex/gen/_detect_environment.py +44 -41
  328. scitex/gen/_detect_notebook_path.py +51 -47
  329. scitex/gen/_embed.py +1 -1
  330. scitex/gen/_get_notebook_path.py +81 -62
  331. scitex/gen/_inspect_module.py +0 -1
  332. scitex/gen/_norm.py +16 -7
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  334. scitex/gen/_print_config.py +0 -3
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  928. scitex/scholar/url_finder/translators/individual/caod.py +50 -46
  929. scitex/scholar/url_finder/translators/individual/cbc.py +91 -67
  930. scitex/scholar/url_finder/translators/individual/ccfr_bnf.py +49 -53
  931. scitex/scholar/url_finder/translators/individual/cia_world_factbook.py +43 -33
  932. scitex/scholar/url_finder/translators/individual/crossref_rest.py +208 -174
  933. scitex/scholar/url_finder/translators/individual/current_affairs.py +29 -35
  934. scitex/scholar/url_finder/translators/individual/dabi.py +70 -66
  935. scitex/scholar/url_finder/translators/individual/dagens_nyheter.py +3 -1
  936. scitex/scholar/url_finder/translators/individual/dagstuhl.py +10 -15
  937. scitex/scholar/url_finder/translators/individual/dar_almandumah.py +13 -9
  938. scitex/scholar/url_finder/translators/individual/dart_europe.py +19 -22
  939. scitex/scholar/url_finder/translators/individual/data_gov.py +2 -2
  940. scitex/scholar/url_finder/translators/individual/databrary.py +27 -28
  941. scitex/scholar/url_finder/translators/individual/datacite_json.py +152 -137
  942. scitex/scholar/url_finder/translators/individual/dataverse.py +68 -64
  943. scitex/scholar/url_finder/translators/individual/daum_news.py +38 -38
  944. scitex/scholar/url_finder/translators/individual/dblp.py +4 -8
  945. scitex/scholar/url_finder/translators/individual/dblp_computer_science_bibliography.py +8 -3
  946. scitex/scholar/url_finder/translators/individual/dbpia.py +5 -3
  947. scitex/scholar/url_finder/translators/individual/defense_technical_information_center.py +30 -28
  948. scitex/scholar/url_finder/translators/individual/delpher.py +102 -79
  949. scitex/scholar/url_finder/translators/individual/demographic_research.py +35 -31
  950. scitex/scholar/url_finder/translators/individual/denik_cz.py +58 -54
  951. scitex/scholar/url_finder/translators/individual/depatisnet.py +7 -10
  952. scitex/scholar/url_finder/translators/individual/der_freitag.py +81 -66
  953. scitex/scholar/url_finder/translators/individual/der_spiegel.py +56 -54
  954. scitex/scholar/url_finder/translators/individual/digibib_net.py +3 -1
  955. scitex/scholar/url_finder/translators/individual/digizeitschriften.py +3 -1
  956. scitex/scholar/url_finder/translators/individual/dpla.py +13 -14
  957. scitex/scholar/url_finder/translators/individual/dspace.py +2 -2
  958. scitex/scholar/url_finder/translators/individual/ebrary.py +3 -1
  959. scitex/scholar/url_finder/translators/individual/ebscohost.py +3 -1
  960. scitex/scholar/url_finder/translators/individual/electronic_colloquium_on_computational_complexity.py +3 -1
  961. scitex/scholar/url_finder/translators/individual/elife.py +3 -1
  962. scitex/scholar/url_finder/translators/individual/elsevier_health_journals.py +3 -1
  963. scitex/scholar/url_finder/translators/individual/emerald.py +3 -1
  964. scitex/scholar/url_finder/translators/individual/emerald_insight.py +3 -1
  965. scitex/scholar/url_finder/translators/individual/epicurious.py +3 -1
  966. scitex/scholar/url_finder/translators/individual/eurogamerusgamer.py +3 -1
  967. scitex/scholar/url_finder/translators/individual/fachportal_padagogik.py +3 -1
  968. scitex/scholar/url_finder/translators/individual/frontiers.py +1 -1
  969. scitex/scholar/url_finder/translators/individual/gale_databases.py +3 -1
  970. scitex/scholar/url_finder/translators/individual/gms_german_medical_science.py +6 -2
  971. scitex/scholar/url_finder/translators/individual/ieee_computer_society.py +6 -2
  972. scitex/scholar/url_finder/translators/individual/ieee_xplore.py +41 -35
  973. scitex/scholar/url_finder/translators/individual/inter_research_science_center.py +6 -2
  974. scitex/scholar/url_finder/translators/individual/jisc_historical_texts.py +3 -1
  975. scitex/scholar/url_finder/translators/individual/jstor.py +14 -12
  976. scitex/scholar/url_finder/translators/individual/korean_national_library.py +3 -1
  977. scitex/scholar/url_finder/translators/individual/la_times.py +3 -1
  978. scitex/scholar/url_finder/translators/individual/landesbibliographie_baden_wurttemberg.py +3 -1
  979. scitex/scholar/url_finder/translators/individual/legislative_insight.py +3 -1
  980. scitex/scholar/url_finder/translators/individual/libraries_tasmania.py +3 -1
  981. scitex/scholar/url_finder/translators/individual/library_catalog__koha_.py +3 -1
  982. scitex/scholar/url_finder/translators/individual/lingbuzz.py +2 -2
  983. scitex/scholar/url_finder/translators/individual/max_planck_institute_for_the_history_of_science_virtual_laboratory_library.py +3 -1
  984. scitex/scholar/url_finder/translators/individual/mdpi.py +12 -6
  985. scitex/scholar/url_finder/translators/individual/microbiology_society_journals.py +3 -1
  986. scitex/scholar/url_finder/translators/individual/midas_journals.py +3 -1
  987. scitex/scholar/url_finder/translators/individual/nagoya_university_opac.py +3 -1
  988. scitex/scholar/url_finder/translators/individual/nature_publishing_group.py +32 -19
  989. scitex/scholar/url_finder/translators/individual/ntsb_accident_reports.py +3 -1
  990. scitex/scholar/url_finder/translators/individual/openedition_journals.py +8 -4
  991. scitex/scholar/url_finder/translators/individual/orcid.py +16 -15
  992. scitex/scholar/url_finder/translators/individual/oxford.py +25 -19
  993. scitex/scholar/url_finder/translators/individual/oxford_dictionaries_premium.py +3 -1
  994. scitex/scholar/url_finder/translators/individual/ozon_ru.py +3 -1
  995. scitex/scholar/url_finder/translators/individual/plos.py +9 -12
  996. scitex/scholar/url_finder/translators/individual/polygon.py +3 -1
  997. scitex/scholar/url_finder/translators/individual/primo.py +3 -1
  998. scitex/scholar/url_finder/translators/individual/project_muse.py +3 -1
  999. scitex/scholar/url_finder/translators/individual/pubfactory_journals.py +3 -1
  1000. scitex/scholar/url_finder/translators/individual/pubmed.py +71 -65
  1001. scitex/scholar/url_finder/translators/individual/pubmed_central.py +8 -6
  1002. scitex/scholar/url_finder/translators/individual/rechtspraak_nl.py +3 -1
  1003. scitex/scholar/url_finder/translators/individual/sage_journals.py +25 -17
  1004. scitex/scholar/url_finder/translators/individual/sciencedirect.py +36 -17
  1005. scitex/scholar/url_finder/translators/individual/semantics_visual_library.py +3 -1
  1006. scitex/scholar/url_finder/translators/individual/silverchair.py +70 -52
  1007. scitex/scholar/url_finder/translators/individual/sora.py +3 -1
  1008. scitex/scholar/url_finder/translators/individual/springer.py +15 -11
  1009. scitex/scholar/url_finder/translators/individual/ssrn.py +3 -3
  1010. scitex/scholar/url_finder/translators/individual/stanford_encyclopedia_of_philosophy.py +3 -1
  1011. scitex/scholar/url_finder/translators/individual/superlib.py +3 -1
  1012. scitex/scholar/url_finder/translators/individual/treesearch.py +3 -1
  1013. scitex/scholar/url_finder/translators/individual/university_of_chicago_press_books.py +3 -1
  1014. scitex/scholar/url_finder/translators/individual/vlex.py +3 -1
  1015. scitex/scholar/url_finder/translators/individual/web_of_science.py +3 -1
  1016. scitex/scholar/url_finder/translators/individual/web_of_science_nextgen.py +3 -1
  1017. scitex/scholar/url_finder/translators/individual/wiley.py +31 -25
  1018. scitex/scholar/url_finder/translators/individual/wilson_center_digital_archive.py +3 -1
  1019. scitex/scholar/utils/bibtex/_parse_bibtex.py +3 -3
  1020. scitex/scholar/utils/cleanup/_cleanup_scholar_processes.py +5 -9
  1021. scitex/scholar/utils/text/_TextNormalizer.py +249 -176
  1022. scitex/scholar/utils/validation/DOIValidator.py +31 -28
  1023. scitex/scholar/utils/validation/__init__.py +0 -0
  1024. scitex/scholar/utils/validation/validate_library_dois.py +61 -57
  1025. scitex/scholar/zotero/__init__.py +1 -1
  1026. scitex/security/cli.py +7 -20
  1027. scitex/security/github.py +45 -32
  1028. scitex/session/__init__.py +8 -9
  1029. scitex/session/_decorator.py +49 -42
  1030. scitex/session/_lifecycle.py +39 -39
  1031. scitex/session/_manager.py +24 -20
  1032. scitex/sh/__init__.py +4 -3
  1033. scitex/sh/_execute.py +10 -7
  1034. scitex/sh/_security.py +3 -3
  1035. scitex/sh/_types.py +2 -3
  1036. scitex/stats/__init__.py +174 -6
  1037. scitex/stats/_schema.py +42 -569
  1038. scitex/stats/auto/__init__.py +188 -0
  1039. scitex/stats/auto/_context.py +331 -0
  1040. scitex/stats/auto/_formatting.py +679 -0
  1041. scitex/stats/auto/_rules.py +901 -0
  1042. scitex/stats/auto/_selector.py +554 -0
  1043. scitex/stats/auto/_styles.py +721 -0
  1044. scitex/stats/correct/__init__.py +4 -4
  1045. scitex/stats/correct/_correct_bonferroni.py +43 -34
  1046. scitex/stats/correct/_correct_fdr.py +14 -40
  1047. scitex/stats/correct/_correct_fdr_.py +39 -46
  1048. scitex/stats/correct/_correct_holm.py +14 -32
  1049. scitex/stats/correct/_correct_sidak.py +36 -21
  1050. scitex/stats/descriptive/_circular.py +20 -21
  1051. scitex/stats/descriptive/_describe.py +19 -5
  1052. scitex/stats/descriptive/_nan.py +5 -7
  1053. scitex/stats/descriptive/_real.py +4 -3
  1054. scitex/stats/effect_sizes/__init__.py +10 -11
  1055. scitex/stats/effect_sizes/_cliffs_delta.py +35 -32
  1056. scitex/stats/effect_sizes/_cohens_d.py +30 -31
  1057. scitex/stats/effect_sizes/_epsilon_squared.py +19 -22
  1058. scitex/stats/effect_sizes/_eta_squared.py +23 -27
  1059. scitex/stats/effect_sizes/_prob_superiority.py +18 -21
  1060. scitex/stats/io/__init__.py +29 -0
  1061. scitex/stats/io/_bundle.py +156 -0
  1062. scitex/stats/posthoc/__init__.py +3 -3
  1063. scitex/stats/posthoc/_dunnett.py +75 -55
  1064. scitex/stats/posthoc/_games_howell.py +61 -43
  1065. scitex/stats/posthoc/_tukey_hsd.py +42 -34
  1066. scitex/stats/power/__init__.py +2 -2
  1067. scitex/stats/power/_power.py +56 -56
  1068. scitex/stats/tests/__init__.py +1 -1
  1069. scitex/stats/tests/correlation/__init__.py +1 -1
  1070. scitex/stats/tests/correlation/_test_pearson.py +28 -38
  1071. scitex/stats/utils/__init__.py +14 -17
  1072. scitex/stats/utils/_effect_size.py +85 -78
  1073. scitex/stats/utils/_formatters.py +49 -43
  1074. scitex/stats/utils/_normalizers.py +7 -14
  1075. scitex/stats/utils/_power.py +56 -56
  1076. scitex/str/__init__.py +1 -0
  1077. scitex/str/_clean_path.py +3 -3
  1078. scitex/str/_factor_out_digits.py +86 -58
  1079. scitex/str/_format_plot_text.py +180 -111
  1080. scitex/str/_latex.py +19 -19
  1081. scitex/str/_latex_fallback.py +9 -10
  1082. scitex/str/_parse.py +3 -6
  1083. scitex/str/_print_debug.py +13 -13
  1084. scitex/str/_printc.py +2 -0
  1085. scitex/str/_search.py +3 -3
  1086. scitex/template/.legacy/_clone_project.py +9 -13
  1087. scitex/template/__init__.py +10 -2
  1088. scitex/template/_clone_project.py +7 -2
  1089. scitex/template/_copy.py +1 -0
  1090. scitex/template/_customize.py +3 -6
  1091. scitex/template/_git_strategy.py +2 -3
  1092. scitex/template/_rename.py +1 -0
  1093. scitex/template/clone_pip_project.py +6 -7
  1094. scitex/template/clone_research.py +7 -10
  1095. scitex/template/clone_singularity.py +6 -7
  1096. scitex/template/clone_writer_directory.py +6 -7
  1097. scitex/tex/__init__.py +4 -0
  1098. scitex/tex/_export.py +890 -0
  1099. scitex/tex/_preview.py +26 -11
  1100. scitex/tex/_to_vec.py +10 -7
  1101. scitex/torch/__init__.py +11 -1
  1102. scitex/types/_ArrayLike.py +2 -0
  1103. scitex/types/_is_listed_X.py +3 -3
  1104. scitex/units.py +110 -77
  1105. scitex/utils/_compress_hdf5.py +3 -3
  1106. scitex/utils/_email.py +8 -4
  1107. scitex/utils/_notify.py +14 -8
  1108. scitex/utils/_search.py +6 -6
  1109. scitex/utils/_verify_scitex_format.py +17 -42
  1110. scitex/utils/_verify_scitex_format_v01.py +12 -34
  1111. scitex/utils/template.py +4 -3
  1112. scitex/web/__init__.py +7 -1
  1113. scitex/web/_scraping.py +54 -38
  1114. scitex/web/_search_pubmed.py +30 -14
  1115. scitex/writer/.legacy/Writer_v01-refactored.py +4 -4
  1116. scitex/writer/.legacy/_compile.py +18 -28
  1117. scitex/writer/Writer.py +8 -21
  1118. scitex/writer/__init__.py +11 -11
  1119. scitex/writer/_clone_writer_project.py +2 -6
  1120. scitex/writer/_compile/__init__.py +1 -0
  1121. scitex/writer/_compile/_parser.py +1 -0
  1122. scitex/writer/_compile/_runner.py +35 -38
  1123. scitex/writer/_compile/_validator.py +1 -0
  1124. scitex/writer/_compile/manuscript.py +1 -0
  1125. scitex/writer/_compile/revision.py +1 -0
  1126. scitex/writer/_compile/supplementary.py +1 -0
  1127. scitex/writer/_compile_async.py +5 -12
  1128. scitex/writer/_project/__init__.py +1 -0
  1129. scitex/writer/_project/_create.py +10 -25
  1130. scitex/writer/_project/_trees.py +4 -9
  1131. scitex/writer/_project/_validate.py +2 -3
  1132. scitex/writer/_validate_tree_structures.py +7 -18
  1133. scitex/writer/dataclasses/__init__.py +8 -10
  1134. scitex/writer/dataclasses/config/_CONSTANTS.py +2 -3
  1135. scitex/writer/dataclasses/config/_WriterConfig.py +4 -9
  1136. scitex/writer/dataclasses/contents/_ManuscriptContents.py +14 -25
  1137. scitex/writer/dataclasses/contents/_RevisionContents.py +21 -16
  1138. scitex/writer/dataclasses/contents/_SupplementaryContents.py +21 -24
  1139. scitex/writer/dataclasses/core/_Document.py +2 -3
  1140. scitex/writer/dataclasses/core/_DocumentSection.py +8 -23
  1141. scitex/writer/dataclasses/results/_CompilationResult.py +2 -3
  1142. scitex/writer/dataclasses/results/_LaTeXIssue.py +3 -6
  1143. scitex/writer/dataclasses/results/_SaveSectionsResponse.py +20 -9
  1144. scitex/writer/dataclasses/results/_SectionReadResponse.py +24 -10
  1145. scitex/writer/dataclasses/tree/_ConfigTree.py +7 -4
  1146. scitex/writer/dataclasses/tree/_ManuscriptTree.py +10 -13
  1147. scitex/writer/dataclasses/tree/_RevisionTree.py +16 -17
  1148. scitex/writer/dataclasses/tree/_ScriptsTree.py +10 -5
  1149. scitex/writer/dataclasses/tree/_SharedTree.py +10 -13
  1150. scitex/writer/dataclasses/tree/_SupplementaryTree.py +15 -14
  1151. scitex/writer/utils/.legacy_git_retry.py +3 -8
  1152. scitex/writer/utils/_parse_latex_logs.py +2 -3
  1153. scitex/writer/utils/_parse_script_args.py +20 -23
  1154. scitex/writer/utils/_watch.py +5 -5
  1155. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/METADATA +14 -10
  1156. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/RECORD +1149 -985
  1157. scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin_v01-indentation-issues.py +0 -583
  1158. scitex/io/memo.md +0 -2827
  1159. scitex/plt/_subplots/TODO.md +0 -53
  1160. scitex/plt/_subplots/_AxisWrapperMixins/_AdjustmentMixin.py +0 -537
  1161. scitex/plt/_subplots/_AxisWrapperMixins/_MatplotlibPlotMixin.py +0 -1499
  1162. scitex/plt/_subplots/_AxisWrapperMixins/_SeabornMixin.py +0 -431
  1163. scitex/plt/_subplots/_export_as_csv_formatters.py +0 -112
  1164. scitex/vis/__init__.py +0 -177
  1165. scitex/vis/editor/_defaults.py +0 -244
  1166. scitex/vis/editor/_edit.py +0 -378
  1167. scitex/vis/editor/flask_editor/__init__.py +0 -21
  1168. scitex/vis/editor/flask_editor/bbox.py +0 -216
  1169. scitex/vis/editor/flask_editor/core.py +0 -152
  1170. scitex/vis/editor/flask_editor/plotter.py +0 -130
  1171. scitex/vis/editor/flask_editor/renderer.py +0 -184
  1172. scitex/vis/editor/flask_editor/templates/html.py +0 -295
  1173. scitex/vis/editor/flask_editor/templates/scripts.py +0 -614
  1174. scitex/vis/editor/flask_editor/templates/styles.py +0 -549
  1175. /scitex/{vis → fig}/README.md +0 -0
  1176. /scitex/{vis → fig}/docs/CANVAS_ARCHITECTURE.md +0 -0
  1177. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/WHEEL +0 -0
  1178. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/entry_points.txt +0 -0
  1179. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/licenses/LICENSE +0 -0
@@ -5,9 +5,8 @@
5
5
  # ----------------------------------------
6
6
  from __future__ import annotations
7
7
  import os
8
- __FILE__ = (
9
- "./src/scitex/scholar/auth/library/_OpenAthensSSOAutomator.py"
10
- )
8
+
9
+ __FILE__ = "./src/scitex/scholar/auth/library/_OpenAthensSSOAutomator.py"
11
10
  __DIR__ = os.path.dirname(__FILE__)
12
11
  # ----------------------------------------
13
12
 
@@ -76,14 +75,10 @@ class OpenAthensSSOAutomator(BaseSSOAutomator):
76
75
  async def perform_login_async(self, page: Page) -> bool:
77
76
  """Perform OpenAthens email entry and institution selection."""
78
77
  try:
79
- self.logger.info(
80
- f"{self.name}: Starting OpenAthens page automation"
81
- )
78
+ self.logger.info(f"{self.name}: Starting OpenAthens page automation")
82
79
 
83
80
  if not self.openathens_email:
84
- self.logger.error(
85
- f"{self.name}: No OpenAthens email configured"
86
- )
81
+ self.logger.error(f"{self.name}: No OpenAthens email configured")
87
82
  return False
88
83
 
89
84
  # Step 1: Enter institutional email
@@ -102,9 +97,7 @@ class OpenAthensSSOAutomator(BaseSSOAutomator):
102
97
  return success
103
98
 
104
99
  except Exception as e:
105
- self.logger.error(
106
- f"{self.name}: OpenAthens page automation failed: {e}"
107
- )
100
+ self.logger.error(f"{self.name}: OpenAthens page automation failed: {e}")
108
101
  await self._take_debug_screenshot_async(page)
109
102
  return False
110
103
 
@@ -137,9 +130,7 @@ class OpenAthensSSOAutomator(BaseSSOAutomator):
137
130
  return True
138
131
 
139
132
  except Exception as e:
140
- self.logger.error(
141
- f"{self.name}: Failed to fill email field: {e}"
142
- )
133
+ self.logger.error(f"{self.name}: Failed to fill email field: {e}")
143
134
  return False
144
135
 
145
136
  except Exception as e:
@@ -167,13 +158,9 @@ class OpenAthensSSOAutomator(BaseSSOAutomator):
167
158
 
168
159
  for selector in submit_selectors:
169
160
  try:
170
- element = await page.wait_for_selector(
171
- selector, timeout=2000
172
- )
161
+ element = await page.wait_for_selector(selector, timeout=2000)
173
162
  if element:
174
- success = await click_with_fallbacks_async(
175
- page, selector
176
- )
163
+ success = await click_with_fallbacks_async(page, selector)
177
164
  if success:
178
165
  self.logger.info(
179
166
  f"{self.name}: Successfully clicked submit using: {selector}"
@@ -203,9 +190,7 @@ class OpenAthensSSOAutomator(BaseSSOAutomator):
203
190
  await page.wait_for_selector(institution_selector, timeout=10000)
204
191
  self.logger.info("Found institution dropdown options")
205
192
 
206
- institution_elements = await page.query_selector_all(
207
- institution_selector
208
- )
193
+ institution_elements = await page.query_selector_all(institution_selector)
209
194
 
210
195
  if len(institution_elements) == 1:
211
196
  # Get text BEFORE clicking
@@ -220,9 +205,7 @@ class OpenAthensSSOAutomator(BaseSSOAutomator):
220
205
  )
221
206
  if not selected:
222
207
  # Get text BEFORE clicking
223
- institution_text = await institution_elements[
224
- 0
225
- ].text_content()
208
+ institution_text = await institution_elements[0].text_content()
226
209
  await institution_elements[0].click()
227
210
  self.logger.info(
228
211
  f"{self.name}: Selected first available institution: {institution_text.strip()}"
@@ -235,14 +218,10 @@ class OpenAthensSSOAutomator(BaseSSOAutomator):
235
218
  return True
236
219
 
237
220
  except Exception as e:
238
- self.logger.error(
239
- f"{self.name}: Failed to select institution: {e}"
240
- )
221
+ self.logger.error(f"{self.name}: Failed to select institution: {e}")
241
222
  return False
242
223
 
243
- async def _select_best_institution_match(
244
- self, page, institution_elements
245
- ) -> bool:
224
+ async def _select_best_institution_match(self, page, institution_elements) -> bool:
246
225
  """Try to select the best matching institution based on email domain."""
247
226
  try:
248
227
  email_domain = (
@@ -296,9 +275,7 @@ class OpenAthensSSOAutomator(BaseSSOAutomator):
296
275
  async def _wait_for_institution_redirect_async(self, page) -> bool:
297
276
  """Wait for redirect to institution SSO page."""
298
277
  try:
299
- self.logger.info(
300
- f"{self.name}: Waiting for redirect to institution SSO..."
301
- )
278
+ self.logger.info(f"{self.name}: Waiting for redirect to institution SSO...")
302
279
 
303
280
  # Wait for URL to change away from OpenAthens
304
281
  for i in range(30): # Wait up to 30 seconds
@@ -312,9 +289,7 @@ class OpenAthensSSOAutomator(BaseSSOAutomator):
312
289
 
313
290
  await page.wait_for_timeout(1000)
314
291
 
315
- self.logger.error(
316
- f"{self.name}: Timeout waiting for institution redirect"
317
- )
292
+ self.logger.error(f"{self.name}: Timeout waiting for institution redirect")
318
293
  return False
319
294
 
320
295
  except Exception as e:
@@ -335,9 +310,7 @@ class OpenAthensSSOAutomator(BaseSSOAutomator):
335
310
  )
336
311
  screenshot_path.parent.mkdir(parents=True, exist_ok=True)
337
312
  await page.screenshot(path=str(screenshot_path))
338
- self.logger.debug(
339
- f"{self.name}: Debug screenshot: {screenshot_path}"
340
- )
313
+ self.logger.debug(f"{self.name}: Debug screenshot: {screenshot_path}")
341
314
  except Exception as e:
342
315
  self.logger.debug(f"{self.name}: Screenshot failed: {e}")
343
316
 
@@ -357,9 +330,7 @@ if __name__ == "__main__":
357
330
  page = await browser.new_page()
358
331
 
359
332
  try:
360
- await page.goto(
361
- "https://my.openathens.net/?passiveLogin=false"
362
- )
333
+ await page.goto("https://my.openathens.net/?passiveLogin=false")
363
334
  success = await automator.perform_login_async(page)
364
335
  print(f"OpenAthens automation success: {success}")
365
336
 
@@ -5,6 +5,7 @@
5
5
  # ----------------------------------------
6
6
  from __future__ import annotations
7
7
  import os
8
+
8
9
  __FILE__ = __file__
9
10
  __DIR__ = os.path.dirname(__FILE__)
10
11
  # ----------------------------------------
@@ -61,9 +62,7 @@ class SSOAutomator:
61
62
  return None
62
63
 
63
64
  @classmethod
64
- def create_from_email(
65
- cls, email: str, **kwargs
66
- ) -> Optional[BaseSSOAutomator]:
65
+ def create_from_email(cls, email: str, **kwargs) -> Optional[BaseSSOAutomator]:
67
66
  """Create SSO automator based on email domain."""
68
67
  if not email:
69
68
  return None
@@ -84,9 +83,7 @@ class SSOAutomator:
84
83
 
85
84
  for pattern, automator_name in cls.URL_PATTERN_MAP.items():
86
85
  if pattern in url_lower:
87
- logger.info(
88
- f"Detected {automator_name.replace('Of', ' of ')} from URL"
89
- )
86
+ logger.info(f"Detected {automator_name.replace('Of', ' of ')} from URL")
90
87
  return cls._create_automator(automator_name, **kwargs)
91
88
 
92
89
  logger.debug(f"No SSO automator found for URL: {url}")
@@ -103,9 +100,7 @@ class SSOAutomator:
103
100
  if key in name_lower:
104
101
  return cls._create_automator(automator_name, **kwargs)
105
102
 
106
- logger.warning(
107
- f"No SSO automator found for institution: {institution_name}"
108
- )
103
+ logger.warning(f"No SSO automator found for institution: {institution_name}")
109
104
  return None
110
105
 
111
106
  @classmethod
@@ -118,9 +113,9 @@ class SSOAutomator:
118
113
  return None
119
114
 
120
115
  try:
121
- module_path, class_name = cls.AUTOMATOR_CLASS_MAP[
122
- automator_name
123
- ].rsplit(".", 1)
116
+ module_path, class_name = cls.AUTOMATOR_CLASS_MAP[automator_name].rsplit(
117
+ ".", 1
118
+ )
124
119
  from importlib import import_module
125
120
 
126
121
  module = import_module(f".{module_path}", package=__package__)
@@ -151,9 +146,7 @@ if __name__ == "__main__":
151
146
 
152
147
  async def test_automator():
153
148
  # automator = UniversityOfMelbourneSSOAutomator()
154
- automator = SSOAutomator(
155
- email=os.getenv("SCITEX_SCHOLAR_SSO_EMAIL")
156
- )
149
+ automator = SSOAutomator(email=os.getenv("SCITEX_SCHOLAR_SSO_EMAIL"))
157
150
 
158
151
  async with async_playwright() as p:
159
152
  browser = await p.chromium.launch(headless=False)
@@ -5,6 +5,7 @@
5
5
  # ----------------------------------------
6
6
  from __future__ import annotations
7
7
  import os
8
+
8
9
  __FILE__ = __file__
9
10
  __DIR__ = os.path.dirname(__FILE__)
10
11
  # ----------------------------------------
@@ -16,7 +17,10 @@ from typing import Optional
16
17
  from playwright.async_api import Page, TimeoutError
17
18
 
18
19
  # from scitex.scholar.browser import BrowserUtils
19
- from scitex.browser.interaction import click_with_fallbacks_async, fill_with_fallbacks_async
20
+ from scitex.browser.interaction import (
21
+ click_with_fallbacks_async,
22
+ fill_with_fallbacks_async,
23
+ )
20
24
  from scitex.scholar.config import ScholarConfig
21
25
 
22
26
  from .BaseSSOAutomator import BaseSSOAutomator
@@ -76,9 +80,7 @@ class UniversityOfMelbourneSSOAutomator(BaseSSOAutomator):
76
80
  username_success = await self._handle_username_step_async(page)
77
81
  if not username_success:
78
82
  # Try generic login as fallback
79
- self.logger.info(
80
- "Trying generic login form detection as fallback"
81
- )
83
+ self.logger.info("Trying generic login form detection as fallback")
82
84
  username_success = await self._handle_generic_login_async(page)
83
85
  if not username_success:
84
86
  return False
@@ -189,9 +191,7 @@ class UniversityOfMelbourneSSOAutomator(BaseSSOAutomator):
189
191
  self.logger.info("Filled generic username field")
190
192
 
191
193
  # Find any password field
192
- password_elements = await page.query_selector_all(
193
- 'input[type="password"]'
194
- )
194
+ password_elements = await page.query_selector_all('input[type="password"]')
195
195
  if password_elements:
196
196
  await page.evaluate(
197
197
  '(args) => { args.element.value = args.value; args.element.dispatchEvent(new Event("input", { bubbles: true })); }',
@@ -219,9 +219,7 @@ class UniversityOfMelbourneSSOAutomator(BaseSSOAutomator):
219
219
  """Handle Duo 2FA using proven working patterns."""
220
220
  try:
221
221
  # Quick check for Duo auth elements
222
- duo_elements = await page.query_selector_all(
223
- ".authenticator-verify-list"
224
- )
222
+ duo_elements = await page.query_selector_all(".authenticator-verify-list")
225
223
 
226
224
  if not duo_elements:
227
225
  try:
@@ -240,9 +238,7 @@ class UniversityOfMelbourneSSOAutomator(BaseSSOAutomator):
240
238
 
241
239
  if push_buttons:
242
240
  await push_buttons[0].click()
243
- self.logger.info(
244
- "Push notification requested - check your device"
245
- )
241
+ self.logger.info("Push notification requested - check your device")
246
242
 
247
243
  # Send notification to user - USER INTERVENTION REQUIRED
248
244
  await self.notify_user_async(
@@ -260,9 +256,7 @@ class UniversityOfMelbourneSSOAutomator(BaseSSOAutomator):
260
256
  )
261
257
  if auth_buttons:
262
258
  await auth_buttons[0].click()
263
- self.logger.info(
264
- "Alternative authentication method selected"
265
- )
259
+ self.logger.info("Alternative authentication method selected")
266
260
 
267
261
  # Send notification for alternative auth - USER INTERVENTION REQUIRED
268
262
  await self.notify_user_async(
@@ -290,9 +284,7 @@ class UniversityOfMelbourneSSOAutomator(BaseSSOAutomator):
290
284
  try:
291
285
  # Check if moved away from SSO
292
286
  if not self.is_sso_page(page.url):
293
- self.logger.info(
294
- "Login successful - redirected away from SSO"
295
- )
287
+ self.logger.info("Login successful - redirected away from SSO")
296
288
  return True
297
289
 
298
290
  # Check for success indicators only if context is still valid
@@ -300,9 +292,7 @@ class UniversityOfMelbourneSSOAutomator(BaseSSOAutomator):
300
292
  'input[name="prompt"], .chat-interface, .dashboard, .main-content'
301
293
  )
302
294
  if success_elements:
303
- self.logger.info(
304
- "Login successful - found success elements"
305
- )
295
+ self.logger.info("Login successful - found success elements")
306
296
  return True
307
297
 
308
298
  except Exception as context_error:
@@ -316,7 +306,7 @@ class UniversityOfMelbourneSSOAutomator(BaseSSOAutomator):
316
306
  return True
317
307
 
318
308
  if ii > 0 and ii % 10 == 0:
319
- self.logger.info(f"Still waiting... ({60-ii}s remaining)")
309
+ self.logger.info(f"Still waiting... ({60 - ii}s remaining)")
320
310
 
321
311
  return False
322
312
 
@@ -5,9 +5,8 @@
5
5
  # ----------------------------------------
6
6
  from __future__ import annotations
7
7
  import os
8
- __FILE__ = (
9
- "./src/scitex/scholar/browser/ScholarBrowserManager.py"
10
- )
8
+
9
+ __FILE__ = "./src/scitex/scholar/browser/ScholarBrowserManager.py"
11
10
  __DIR__ = os.path.dirname(__FILE__)
12
11
  # ----------------------------------------
13
12
 
@@ -124,9 +123,7 @@ class ScholarBrowserManager(BrowserMixin):
124
123
  )
125
124
 
126
125
  # Stealth
127
- self.stealth_manager = StealthManager(
128
- self.viewport_size, self.spoof_dimension
129
- )
126
+ self.stealth_manager = StealthManager(self.viewport_size, self.spoof_dimension)
130
127
 
131
128
  # Cookie
132
129
  self.cookie_acceptor = CookieAutoAcceptor()
@@ -183,9 +180,7 @@ class ScholarBrowserManager(BrowserMixin):
183
180
  f"{self.name}: Using persistent context with profile and extensions"
184
181
  )
185
182
  else:
186
- logger.warning(
187
- f"{self.name}: Falling back to regular context creation"
188
- )
183
+ logger.warning(f"{self.name}: Falling back to regular context creation")
189
184
 
190
185
  auth_options = await self.auth_manager.get_auth_options()
191
186
  context_options.update(auth_options)
@@ -199,18 +194,14 @@ class ScholarBrowserManager(BrowserMixin):
199
194
  ) -> BrowserContext:
200
195
  """Creates a new browser context with stealth options and invisible mode applied."""
201
196
  stealth_options = self.stealth_manager.get_stealth_options()
202
- context = await browser.new_context(
203
- {**stealth_options, **context_options}
204
- )
197
+ context = await browser.new_context({**stealth_options, **context_options})
205
198
 
206
199
  # Apply stealth script
207
200
  await context.add_init_script(self.stealth_manager.get_init_script())
208
201
  await context.add_init_script(
209
202
  self.stealth_manager.get_dimension_spoofing_script()
210
203
  )
211
- await context.add_init_script(
212
- self.cookie_acceptor.get_auto_acceptor_script()
213
- )
204
+ await context.add_init_script(self.cookie_acceptor.get_auto_acceptor_script())
214
205
  return context
215
206
 
216
207
  # ########################################
@@ -277,9 +268,7 @@ class ScholarBrowserManager(BrowserMixin):
277
268
  )
278
269
 
279
270
  if removed_locks > 0:
280
- logger.debug(
281
- f"{self.name}: Cleaned up {removed_locks} Chrome lock files"
282
- )
271
+ logger.debug(f"{self.name}: Cleaned up {removed_locks} Chrome lock files")
283
272
  # Wait a moment for the system to release file handles
284
273
  time.sleep(1)
285
274
 
@@ -302,13 +291,19 @@ class ScholarBrowserManager(BrowserMixin):
302
291
 
303
292
  # This show_asyncs a small screen with 4 extensions show_asyncn
304
293
  persistent_context_launch_options["headless"] = False
305
- self._persistent_context = await self._persistent_playwright.chromium.launch_persistent_context(
306
- **persistent_context_launch_options
294
+ self._persistent_context = (
295
+ await self._persistent_playwright.chromium.launch_persistent_context(
296
+ **persistent_context_launch_options
297
+ )
307
298
  )
308
299
  # First cleanup run (immediate, non-continuous)
309
- await close_unwanted_pages(self._persistent_context, delay_sec=1, continuous=False)
300
+ await close_unwanted_pages(
301
+ self._persistent_context, delay_sec=1, continuous=False
302
+ )
310
303
  # Background continuous monitoring task
311
- asyncio.create_task(close_unwanted_pages(self._persistent_context, delay_sec=5, continuous=True))
304
+ asyncio.create_task(
305
+ close_unwanted_pages(self._persistent_context, delay_sec=5, continuous=True)
306
+ )
312
307
  # await self._close_unwanted_extension_pages_async()
313
308
  # asyncio.create_task(self._close_unwanted_extension_pages_async())
314
309
  await self._apply_stealth_scripts_to_persistent_context_async()
@@ -325,14 +320,10 @@ class ScholarBrowserManager(BrowserMixin):
325
320
  timeout=5,
326
321
  )
327
322
  if result.returncode == 0:
328
- logger.debug(
329
- f"{self.name}: Xvfb display :{self.display} is running"
330
- )
323
+ logger.debug(f"{self.name}: Xvfb display :{self.display} is running")
331
324
  return True
332
325
  else:
333
- logger.debug(
334
- f"{self.name}: Starting Xvfb display :{self.display}"
335
- )
326
+ logger.debug(f"{self.name}: Starting Xvfb display :{self.display}")
336
327
  # Kill any existing Xvfb on this display first
337
328
  subprocess.run(
338
329
  ["pkill", "-f", f"Xvfb.*:{self.display}"],
@@ -437,9 +428,7 @@ class ScholarBrowserManager(BrowserMixin):
437
428
  "headless": self.headless,
438
429
  "args": launch_args,
439
430
  "accept_downloads": True, # Enable download handling
440
- "downloads_path": str(
441
- downloads_path
442
- ), # Set custom download directory
431
+ "downloads_path": str(downloads_path), # Set custom download directory
443
432
  "proxy": proxy_config,
444
433
  "viewport": {
445
434
  "width": self.viewport_size[0],
@@ -472,9 +461,7 @@ class ScholarBrowserManager(BrowserMixin):
472
461
 
473
462
  try:
474
463
  # Check if we have authentication
475
- if await self.auth_manager.is_authenticate_async(
476
- verify_live=False
477
- ):
464
+ if await self.auth_manager.is_authenticate_async(verify_live=False):
478
465
  cookies = await self.auth_manager.get_auth_cookies_async()
479
466
  if cookies:
480
467
  await self._persistent_context.add_cookies(cookies)
@@ -482,17 +469,11 @@ class ScholarBrowserManager(BrowserMixin):
482
469
  f"{self.name}: Loaded {len(cookies)} authentication cookies into persistent browser context"
483
470
  )
484
471
  else:
485
- logger.debug(
486
- f"{self.name}: No cookies available from auth manager"
487
- )
472
+ logger.debug(f"{self.name}: No cookies available from auth manager")
488
473
  else:
489
- logger.debug(
490
- f"{self.name}: Not authenticated, skipping cookie loading"
491
- )
474
+ logger.debug(f"{self.name}: Not authenticated, skipping cookie loading")
492
475
  except Exception as e:
493
- logger.warning(
494
- f"{self.name}: Failed to load authentication cookies: {e}"
495
- )
476
+ logger.warning(f"{self.name}: Failed to load authentication cookies: {e}")
496
477
 
497
478
  async def take_screenshot_async(
498
479
  self,
@@ -558,9 +539,7 @@ class ScholarBrowserManager(BrowserMixin):
558
539
  )
559
540
  except Exception as e:
560
541
  if verbose:
561
- logger.debug(
562
- f"{self.name}: Screenshot {step} failed: {e}"
563
- )
542
+ logger.debug(f"{self.name}: Screenshot {step} failed: {e}")
564
543
 
565
544
  await asyncio.sleep(interval_seconds)
566
545
  elapsed += interval_seconds
@@ -599,10 +578,7 @@ class ScholarBrowserManager(BrowserMixin):
599
578
  await self._persistent_context.close()
600
579
  logger.debug(f"{self.name}: Closed persistent browser context")
601
580
 
602
- if (
603
- self._persistent_browser
604
- and self._persistent_browser.is_connected()
605
- ):
581
+ if self._persistent_browser and self._persistent_browser.is_connected():
606
582
  await self._persistent_browser.close()
607
583
  logger.debug(f"{self.name}: Closed persistent browser")
608
584
 
@@ -631,9 +607,10 @@ if __name__ == "__main__":
631
607
  auth_manager=ScholarAuthManager(),
632
608
  )
633
609
 
634
- browser, context = (
635
- await browser_manager.get_authenticated_browser_and_context_async()
636
- )
610
+ (
611
+ browser,
612
+ context,
613
+ ) = await browser_manager.get_authenticated_browser_and_context_async()
637
614
  page = await context.new_page()
638
615
 
639
616
  # Test sites configuration
@@ -686,9 +663,7 @@ if __name__ == "__main__":
686
663
 
687
664
  import argparse
688
665
 
689
- parser = argparse.ArgumentParser(
690
- description="ScholarBrowserManager testing"
691
- )
666
+ parser = argparse.ArgumentParser(description="ScholarBrowserManager testing")
692
667
  parser.add_argument(
693
668
  "--stealth",
694
669
  action="store_true",
@@ -5,6 +5,7 @@
5
5
  # ----------------------------------------
6
6
  from __future__ import annotations
7
7
  import os
8
+
8
9
  __FILE__ = __file__
9
10
  __DIR__ = os.path.dirname(__FILE__)
10
11
  # ----------------------------------------
@@ -5,9 +5,8 @@
5
5
  # ----------------------------------------
6
6
  from __future__ import annotations
7
7
  import os
8
- __FILE__ = (
9
- "./src/scitex/scholar/browser/utils/click_and_wait.py"
10
- )
8
+
9
+ __FILE__ = "./src/scitex/scholar/browser/utils/click_and_wait.py"
11
10
  __DIR__ = os.path.dirname(__FILE__)
12
11
  # ----------------------------------------
13
12
 
@@ -73,7 +72,7 @@ async def click_and_wait(
73
72
  initial_url = page.url
74
73
  href = await link.get_attribute("href") or ""
75
74
  text = await link.inner_text() or ""
76
- logger.debug(f"{func_name,} Clicking: '{text[:30]}' -> {href[:50]}")
75
+ logger.debug(f"{(func_name,)} Clicking: '{text[:30]}' -> {href[:50]}")
77
76
 
78
77
  try:
79
78
  # Handle potential new page opening
@@ -5,9 +5,8 @@
5
5
  # ----------------------------------------
6
6
  from __future__ import annotations
7
7
  import os
8
- __FILE__ = (
9
- "./src/scitex/scholar/browser/utils/close_unwanted_pages.py"
10
- )
8
+
9
+ __FILE__ = "./src/scitex/scholar/browser/utils/close_unwanted_pages.py"
11
10
  __DIR__ = os.path.dirname(__FILE__)
12
11
  # ----------------------------------------
13
12
 
@@ -63,10 +62,7 @@ async def close_unwanted_pages(
63
62
  # Get a valid page for browser_logger (prefer non-extension pages)
64
63
  valid_page = None
65
64
  for page in current_pages:
66
- if (
67
- "chrome-extension://" not in page.url
68
- and not page.is_closed()
69
- ):
65
+ if "chrome-extension://" not in page.url and not page.is_closed():
70
66
  valid_page = page
71
67
  break
72
68
 
@@ -137,4 +133,5 @@ async def close_unwanted_pages(
137
133
  f"{func_name}: Cleanup attempt {attempt + 1} failed",
138
134
  )
139
135
 
136
+
140
137
  # EOF