scitex 2.5.0__py3-none-any.whl → 2.7.3__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1179) hide show
  1. scitex/__init__.py +25 -10
  2. scitex/__main__.py +2 -1
  3. scitex/__version__.py +1 -1
  4. scitex/_optional_deps.py +13 -20
  5. scitex/ai/__init__.py +5 -0
  6. scitex/ai/_gen_ai/_Anthropic.py +3 -1
  7. scitex/ai/_gen_ai/_BaseGenAI.py +3 -2
  8. scitex/ai/_gen_ai/_DeepSeek.py +1 -1
  9. scitex/ai/_gen_ai/_Google.py +3 -2
  10. scitex/ai/_gen_ai/_Llama.py +4 -2
  11. scitex/ai/_gen_ai/_OpenAI.py +3 -1
  12. scitex/ai/_gen_ai/_PARAMS.py +1 -0
  13. scitex/ai/_gen_ai/_Perplexity.py +3 -1
  14. scitex/ai/_gen_ai/__init__.py +1 -0
  15. scitex/ai/_gen_ai/_format_output_func.py +3 -1
  16. scitex/ai/classification/CrossValidationExperiment.py +8 -14
  17. scitex/ai/classification/examples/timeseries_cv_demo.py +128 -112
  18. scitex/ai/classification/reporters/_BaseClassificationReporter.py +2 -0
  19. scitex/ai/classification/reporters/_ClassificationReporter.py +30 -45
  20. scitex/ai/classification/reporters/_MultiClassificationReporter.py +8 -11
  21. scitex/ai/classification/reporters/_SingleClassificationReporter.py +126 -182
  22. scitex/ai/classification/reporters/__init__.py +1 -1
  23. scitex/ai/classification/reporters/reporter_utils/_Plotter.py +213 -119
  24. scitex/ai/classification/reporters/reporter_utils/__init__.py +28 -36
  25. scitex/ai/classification/reporters/reporter_utils/aggregation.py +125 -143
  26. scitex/ai/classification/reporters/reporter_utils/data_models.py +128 -120
  27. scitex/ai/classification/reporters/reporter_utils/reporting.py +507 -340
  28. scitex/ai/classification/reporters/reporter_utils/storage.py +4 -1
  29. scitex/ai/classification/reporters/reporter_utils/validation.py +141 -154
  30. scitex/ai/classification/timeseries/_TimeSeriesBlockingSplit.py +204 -129
  31. scitex/ai/classification/timeseries/_TimeSeriesCalendarSplit.py +215 -171
  32. scitex/ai/classification/timeseries/_TimeSeriesMetadata.py +17 -17
  33. scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit.py +67 -143
  34. scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit_v01-not-using-n_splits.py +67 -143
  35. scitex/ai/classification/timeseries/_TimeSeriesStrategy.py +12 -13
  36. scitex/ai/classification/timeseries/_TimeSeriesStratifiedSplit.py +231 -144
  37. scitex/ai/classification/timeseries/__init__.py +2 -4
  38. scitex/ai/classification/timeseries/_normalize_timestamp.py +3 -0
  39. scitex/ai/clustering/_pca.py +0 -1
  40. scitex/ai/clustering/_umap.py +1 -2
  41. scitex/ai/feature_extraction/__init__.py +10 -8
  42. scitex/ai/feature_extraction/vit.py +0 -1
  43. scitex/ai/feature_selection/feature_selection.py +3 -8
  44. scitex/ai/metrics/_calc_conf_mat.py +2 -0
  45. scitex/ai/metrics/_calc_feature_importance.py +3 -7
  46. scitex/ai/metrics/_calc_pre_rec_auc.py +5 -5
  47. scitex/ai/metrics/_calc_roc_auc.py +4 -2
  48. scitex/ai/metrics/_calc_seizure_prediction_metrics.py +35 -20
  49. scitex/ai/metrics/_calc_silhouette_score.py +1 -3
  50. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger.py +0 -3
  51. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger2020.py +0 -3
  52. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger913A.py +0 -3
  53. scitex/ai/optim/_optimizers.py +1 -1
  54. scitex/ai/plt/__init__.py +6 -1
  55. scitex/ai/plt/_plot_feature_importance.py +1 -3
  56. scitex/ai/plt/_plot_learning_curve.py +9 -24
  57. scitex/ai/plt/_plot_optuna_study.py +4 -3
  58. scitex/ai/plt/_plot_pre_rec_curve.py +9 -15
  59. scitex/ai/plt/_plot_roc_curve.py +6 -8
  60. scitex/ai/plt/_stx_conf_mat.py +121 -122
  61. scitex/ai/sampling/undersample.py +3 -2
  62. scitex/ai/sklearn/__init__.py +2 -2
  63. scitex/ai/training/_LearningCurveLogger.py +23 -10
  64. scitex/ai/utils/_check_params.py +0 -1
  65. scitex/audio/README.md +52 -0
  66. scitex/audio/__init__.py +384 -0
  67. scitex/audio/__main__.py +129 -0
  68. scitex/audio/_tts.py +334 -0
  69. scitex/audio/engines/__init__.py +44 -0
  70. scitex/audio/engines/base.py +275 -0
  71. scitex/audio/engines/elevenlabs_engine.py +143 -0
  72. scitex/audio/engines/gtts_engine.py +162 -0
  73. scitex/audio/engines/pyttsx3_engine.py +131 -0
  74. scitex/audio/mcp_server.py +757 -0
  75. scitex/benchmark/__init__.py +15 -25
  76. scitex/benchmark/benchmark.py +124 -117
  77. scitex/benchmark/monitor.py +117 -107
  78. scitex/benchmark/profiler.py +61 -58
  79. scitex/bridge/__init__.py +110 -0
  80. scitex/bridge/_helpers.py +149 -0
  81. scitex/bridge/_plt_vis.py +529 -0
  82. scitex/bridge/_protocol.py +283 -0
  83. scitex/bridge/_stats_plt.py +261 -0
  84. scitex/bridge/_stats_vis.py +265 -0
  85. scitex/browser/__init__.py +0 -2
  86. scitex/browser/auth/__init__.py +0 -0
  87. scitex/browser/auth/google.py +16 -11
  88. scitex/browser/automation/CookieHandler.py +2 -3
  89. scitex/browser/collaboration/__init__.py +3 -0
  90. scitex/browser/collaboration/auth_helpers.py +3 -1
  91. scitex/browser/collaboration/collaborative_agent.py +2 -0
  92. scitex/browser/collaboration/interactive_panel.py +2 -2
  93. scitex/browser/collaboration/shared_session.py +20 -11
  94. scitex/browser/collaboration/standard_interactions.py +1 -0
  95. scitex/browser/core/BrowserMixin.py +12 -30
  96. scitex/browser/core/ChromeProfileManager.py +9 -24
  97. scitex/browser/debugging/_browser_logger.py +15 -25
  98. scitex/browser/debugging/_failure_capture.py +9 -2
  99. scitex/browser/debugging/_highlight_element.py +15 -6
  100. scitex/browser/debugging/_show_grid.py +5 -6
  101. scitex/browser/debugging/_sync_session.py +4 -3
  102. scitex/browser/debugging/_test_monitor.py +14 -5
  103. scitex/browser/debugging/_visual_cursor.py +46 -35
  104. scitex/browser/interaction/click_center.py +4 -3
  105. scitex/browser/interaction/click_with_fallbacks.py +7 -10
  106. scitex/browser/interaction/close_popups.py +79 -66
  107. scitex/browser/interaction/fill_with_fallbacks.py +8 -8
  108. scitex/browser/pdf/__init__.py +3 -1
  109. scitex/browser/pdf/click_download_for_chrome_pdf_viewer.py +11 -10
  110. scitex/browser/pdf/detect_chrome_pdf_viewer.py +3 -6
  111. scitex/browser/remote/CaptchaHandler.py +109 -96
  112. scitex/browser/remote/ZenRowsAPIClient.py +91 -97
  113. scitex/browser/remote/ZenRowsBrowserManager.py +138 -112
  114. scitex/browser/stealth/HumanBehavior.py +4 -9
  115. scitex/browser/stealth/StealthManager.py +11 -26
  116. scitex/capture/__init__.py +17 -17
  117. scitex/capture/__main__.py +2 -3
  118. scitex/capture/capture.py +23 -51
  119. scitex/capture/cli.py +14 -39
  120. scitex/capture/gif.py +5 -9
  121. scitex/capture/mcp_server.py +7 -20
  122. scitex/capture/session.py +4 -3
  123. scitex/capture/utils.py +18 -53
  124. scitex/cli/__init__.py +1 -1
  125. scitex/cli/cloud.py +158 -116
  126. scitex/cli/config.py +224 -0
  127. scitex/cli/main.py +41 -40
  128. scitex/cli/scholar.py +60 -27
  129. scitex/cli/security.py +14 -20
  130. scitex/cli/web.py +87 -90
  131. scitex/cli/writer.py +51 -45
  132. scitex/cloud/__init__.py +14 -11
  133. scitex/cloud/_matplotlib_hook.py +6 -6
  134. scitex/config/README.md +313 -0
  135. scitex/config/{PriorityConfig.py → _PriorityConfig.py} +114 -17
  136. scitex/config/_ScitexConfig.py +319 -0
  137. scitex/config/__init__.py +41 -9
  138. scitex/config/_paths.py +325 -0
  139. scitex/config/default.yaml +81 -0
  140. scitex/context/_suppress_output.py +2 -3
  141. scitex/db/_BaseMixins/_BaseBackupMixin.py +3 -1
  142. scitex/db/_BaseMixins/_BaseBatchMixin.py +3 -1
  143. scitex/db/_BaseMixins/_BaseBlobMixin.py +3 -1
  144. scitex/db/_BaseMixins/_BaseImportExportMixin.py +1 -3
  145. scitex/db/_BaseMixins/_BaseIndexMixin.py +3 -1
  146. scitex/db/_BaseMixins/_BaseMaintenanceMixin.py +1 -3
  147. scitex/db/_BaseMixins/_BaseQueryMixin.py +3 -1
  148. scitex/db/_BaseMixins/_BaseRowMixin.py +3 -1
  149. scitex/db/_BaseMixins/_BaseTableMixin.py +3 -1
  150. scitex/db/_BaseMixins/_BaseTransactionMixin.py +1 -3
  151. scitex/db/_BaseMixins/__init__.py +1 -1
  152. scitex/db/__init__.py +9 -1
  153. scitex/db/__main__.py +8 -21
  154. scitex/db/_check_health.py +15 -31
  155. scitex/db/_delete_duplicates.py +7 -4
  156. scitex/db/_inspect.py +22 -38
  157. scitex/db/_inspect_optimized.py +89 -85
  158. scitex/db/_postgresql/_PostgreSQL.py +0 -1
  159. scitex/db/_postgresql/_PostgreSQLMixins/_BlobMixin.py +3 -1
  160. scitex/db/_postgresql/_PostgreSQLMixins/_ConnectionMixin.py +1 -3
  161. scitex/db/_postgresql/_PostgreSQLMixins/_ImportExportMixin.py +1 -3
  162. scitex/db/_postgresql/_PostgreSQLMixins/_MaintenanceMixin.py +1 -4
  163. scitex/db/_postgresql/_PostgreSQLMixins/_QueryMixin.py +3 -3
  164. scitex/db/_postgresql/_PostgreSQLMixins/_RowMixin.py +3 -1
  165. scitex/db/_postgresql/_PostgreSQLMixins/_TransactionMixin.py +1 -3
  166. scitex/db/_postgresql/__init__.py +1 -1
  167. scitex/db/_sqlite3/_SQLite3.py +2 -4
  168. scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin.py +11 -12
  169. scitex/db/_sqlite3/_SQLite3Mixins/_ArrayMixin_v01-need-_hash-col.py +19 -14
  170. scitex/db/_sqlite3/_SQLite3Mixins/_BatchMixin.py +3 -1
  171. scitex/db/_sqlite3/_SQLite3Mixins/_BlobMixin.py +7 -7
  172. scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin.py +118 -111
  173. scitex/db/_sqlite3/_SQLite3Mixins/_ConnectionMixin.py +8 -10
  174. scitex/db/_sqlite3/_SQLite3Mixins/_GitMixin.py +17 -45
  175. scitex/db/_sqlite3/_SQLite3Mixins/_ImportExportMixin.py +1 -3
  176. scitex/db/_sqlite3/_SQLite3Mixins/_IndexMixin.py +3 -1
  177. scitex/db/_sqlite3/_SQLite3Mixins/_QueryMixin.py +3 -4
  178. scitex/db/_sqlite3/_SQLite3Mixins/_RowMixin.py +9 -9
  179. scitex/db/_sqlite3/_SQLite3Mixins/_TableMixin.py +18 -11
  180. scitex/db/_sqlite3/_SQLite3Mixins/__init__.py +1 -0
  181. scitex/db/_sqlite3/__init__.py +1 -1
  182. scitex/db/_sqlite3/_delete_duplicates.py +13 -11
  183. scitex/decorators/__init__.py +29 -4
  184. scitex/decorators/_auto_order.py +43 -43
  185. scitex/decorators/_batch_fn.py +12 -6
  186. scitex/decorators/_cache_disk.py +8 -9
  187. scitex/decorators/_cache_disk_async.py +8 -7
  188. scitex/decorators/_combined.py +19 -13
  189. scitex/decorators/_converters.py +16 -3
  190. scitex/decorators/_deprecated.py +32 -22
  191. scitex/decorators/_numpy_fn.py +18 -4
  192. scitex/decorators/_pandas_fn.py +17 -5
  193. scitex/decorators/_signal_fn.py +17 -3
  194. scitex/decorators/_torch_fn.py +32 -15
  195. scitex/decorators/_xarray_fn.py +23 -9
  196. scitex/dev/_analyze_code_flow.py +0 -2
  197. scitex/dev/plt/__init__.py +272 -0
  198. scitex/dev/plt/plot_mpl_axhline.py +28 -0
  199. scitex/dev/plt/plot_mpl_axhspan.py +28 -0
  200. scitex/dev/plt/plot_mpl_axvline.py +28 -0
  201. scitex/dev/plt/plot_mpl_axvspan.py +28 -0
  202. scitex/dev/plt/plot_mpl_bar.py +29 -0
  203. scitex/dev/plt/plot_mpl_barh.py +29 -0
  204. scitex/dev/plt/plot_mpl_boxplot.py +28 -0
  205. scitex/dev/plt/plot_mpl_contour.py +31 -0
  206. scitex/dev/plt/plot_mpl_contourf.py +31 -0
  207. scitex/dev/plt/plot_mpl_errorbar.py +30 -0
  208. scitex/dev/plt/plot_mpl_eventplot.py +28 -0
  209. scitex/dev/plt/plot_mpl_fill.py +30 -0
  210. scitex/dev/plt/plot_mpl_fill_between.py +31 -0
  211. scitex/dev/plt/plot_mpl_hexbin.py +28 -0
  212. scitex/dev/plt/plot_mpl_hist.py +28 -0
  213. scitex/dev/plt/plot_mpl_hist2d.py +28 -0
  214. scitex/dev/plt/plot_mpl_imshow.py +29 -0
  215. scitex/dev/plt/plot_mpl_pcolormesh.py +31 -0
  216. scitex/dev/plt/plot_mpl_pie.py +29 -0
  217. scitex/dev/plt/plot_mpl_plot.py +29 -0
  218. scitex/dev/plt/plot_mpl_quiver.py +31 -0
  219. scitex/dev/plt/plot_mpl_scatter.py +28 -0
  220. scitex/dev/plt/plot_mpl_stackplot.py +31 -0
  221. scitex/dev/plt/plot_mpl_stem.py +29 -0
  222. scitex/dev/plt/plot_mpl_step.py +29 -0
  223. scitex/dev/plt/plot_mpl_violinplot.py +28 -0
  224. scitex/dev/plt/plot_sns_barplot.py +29 -0
  225. scitex/dev/plt/plot_sns_boxplot.py +29 -0
  226. scitex/dev/plt/plot_sns_heatmap.py +28 -0
  227. scitex/dev/plt/plot_sns_histplot.py +29 -0
  228. scitex/dev/plt/plot_sns_kdeplot.py +29 -0
  229. scitex/dev/plt/plot_sns_lineplot.py +31 -0
  230. scitex/dev/plt/plot_sns_scatterplot.py +29 -0
  231. scitex/dev/plt/plot_sns_stripplot.py +29 -0
  232. scitex/dev/plt/plot_sns_swarmplot.py +29 -0
  233. scitex/dev/plt/plot_sns_violinplot.py +29 -0
  234. scitex/dev/plt/plot_stx_bar.py +29 -0
  235. scitex/dev/plt/plot_stx_barh.py +29 -0
  236. scitex/dev/plt/plot_stx_box.py +28 -0
  237. scitex/dev/plt/plot_stx_boxplot.py +28 -0
  238. scitex/dev/plt/plot_stx_conf_mat.py +28 -0
  239. scitex/dev/plt/plot_stx_contour.py +31 -0
  240. scitex/dev/plt/plot_stx_ecdf.py +28 -0
  241. scitex/dev/plt/plot_stx_errorbar.py +30 -0
  242. scitex/dev/plt/plot_stx_fill_between.py +31 -0
  243. scitex/dev/plt/plot_stx_fillv.py +28 -0
  244. scitex/dev/plt/plot_stx_heatmap.py +28 -0
  245. scitex/dev/plt/plot_stx_image.py +28 -0
  246. scitex/dev/plt/plot_stx_imshow.py +28 -0
  247. scitex/dev/plt/plot_stx_joyplot.py +28 -0
  248. scitex/dev/plt/plot_stx_kde.py +28 -0
  249. scitex/dev/plt/plot_stx_line.py +28 -0
  250. scitex/dev/plt/plot_stx_mean_ci.py +28 -0
  251. scitex/dev/plt/plot_stx_mean_std.py +28 -0
  252. scitex/dev/plt/plot_stx_median_iqr.py +28 -0
  253. scitex/dev/plt/plot_stx_raster.py +28 -0
  254. scitex/dev/plt/plot_stx_rectangle.py +28 -0
  255. scitex/dev/plt/plot_stx_scatter.py +29 -0
  256. scitex/dev/plt/plot_stx_shaded_line.py +29 -0
  257. scitex/dev/plt/plot_stx_violin.py +28 -0
  258. scitex/dev/plt/plot_stx_violinplot.py +28 -0
  259. scitex/dict/_DotDict.py +15 -19
  260. scitex/dict/_flatten.py +1 -0
  261. scitex/dict/_listed_dict.py +1 -0
  262. scitex/dict/_pop_keys.py +1 -0
  263. scitex/dict/_replace.py +1 -0
  264. scitex/dict/_safe_merge.py +1 -0
  265. scitex/dict/_to_str.py +2 -3
  266. scitex/dsp/__init__.py +13 -4
  267. scitex/dsp/_crop.py +3 -1
  268. scitex/dsp/_detect_ripples.py +3 -1
  269. scitex/dsp/_modulation_index.py +3 -1
  270. scitex/dsp/_time.py +3 -1
  271. scitex/dsp/_wavelet.py +0 -1
  272. scitex/dsp/example.py +0 -5
  273. scitex/dsp/filt.py +4 -0
  274. scitex/dsp/utils/__init__.py +4 -1
  275. scitex/dsp/utils/pac.py +3 -3
  276. scitex/dt/_normalize_timestamp.py +4 -1
  277. scitex/errors.py +3 -6
  278. scitex/etc/__init__.py +1 -1
  279. scitex/fig/__init__.py +352 -0
  280. scitex/{vis → fig}/backend/__init__.py +3 -3
  281. scitex/{vis/backend/export.py → fig/backend/_export.py} +1 -1
  282. scitex/{vis/backend/parser.py → fig/backend/_parser.py} +2 -4
  283. scitex/{vis/backend/render.py → fig/backend/_render.py} +1 -1
  284. scitex/{vis → fig}/canvas.py +16 -4
  285. scitex/{vis → fig}/editor/__init__.py +0 -0
  286. scitex/{vis → fig}/editor/_dearpygui_editor.py +450 -304
  287. scitex/fig/editor/_defaults.py +300 -0
  288. scitex/fig/editor/_edit.py +751 -0
  289. scitex/{vis → fig}/editor/_flask_editor.py +8 -8
  290. scitex/{vis → fig}/editor/_mpl_editor.py +63 -48
  291. scitex/{vis → fig}/editor/_qt_editor.py +391 -160
  292. scitex/{vis → fig}/editor/_tkinter_editor.py +146 -89
  293. scitex/fig/editor/flask_editor/__init__.py +21 -0
  294. scitex/fig/editor/flask_editor/_bbox.py +1276 -0
  295. scitex/fig/editor/flask_editor/_core.py +624 -0
  296. scitex/fig/editor/flask_editor/_plotter.py +601 -0
  297. scitex/fig/editor/flask_editor/_renderer.py +739 -0
  298. scitex/{vis/editor/flask_editor/utils.py → fig/editor/flask_editor/_utils.py} +13 -14
  299. scitex/{vis → fig}/editor/flask_editor/templates/__init__.py +6 -6
  300. scitex/fig/editor/flask_editor/templates/_html.py +834 -0
  301. scitex/fig/editor/flask_editor/templates/_scripts.py +3136 -0
  302. scitex/fig/editor/flask_editor/templates/_styles.py +1346 -0
  303. scitex/{vis → fig}/io/__init__.py +18 -6
  304. scitex/fig/io/_bundle.py +973 -0
  305. scitex/{vis/io/canvas.py → fig/io/_canvas.py} +9 -5
  306. scitex/{vis/io/data.py → fig/io/_data.py} +14 -10
  307. scitex/{vis/io/directory.py → fig/io/_directory.py} +7 -4
  308. scitex/{vis/io/export.py → fig/io/_export.py} +16 -13
  309. scitex/{vis/io/load.py → fig/io/_load.py} +2 -2
  310. scitex/{vis/io/panel.py → fig/io/_panel.py} +22 -14
  311. scitex/{vis/io/save.py → fig/io/_save.py} +1 -1
  312. scitex/{vis → fig}/model/__init__.py +8 -8
  313. scitex/{vis/model/annotations.py → fig/model/_annotations.py} +3 -5
  314. scitex/{vis/model/axes.py → fig/model/_axes.py} +2 -2
  315. scitex/{vis/model/figure.py → fig/model/_figure.py} +1 -1
  316. scitex/{vis/model/guides.py → fig/model/_guides.py} +2 -2
  317. scitex/{vis/model/plot.py → fig/model/_plot.py} +3 -5
  318. scitex/{vis/model/plot_types.py → fig/model/_plot_types.py} +0 -0
  319. scitex/{vis/model/styles.py → fig/model/_styles.py} +1 -1
  320. scitex/{vis → fig}/utils/__init__.py +3 -3
  321. scitex/{vis/utils/defaults.py → fig/utils/_defaults.py} +1 -2
  322. scitex/{vis/utils/validate.py → fig/utils/_validate.py} +3 -9
  323. scitex/gen/_DimHandler.py +6 -6
  324. scitex/gen/__init__.py +5 -1
  325. scitex/gen/_deprecated_close.py +1 -0
  326. scitex/gen/_deprecated_start.py +5 -3
  327. scitex/gen/_detect_environment.py +44 -41
  328. scitex/gen/_detect_notebook_path.py +51 -47
  329. scitex/gen/_embed.py +1 -1
  330. scitex/gen/_get_notebook_path.py +81 -62
  331. scitex/gen/_inspect_module.py +0 -1
  332. scitex/gen/_norm.py +16 -7
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  334. scitex/gen/_print_config.py +0 -3
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  928. scitex/scholar/url_finder/translators/individual/caod.py +50 -46
  929. scitex/scholar/url_finder/translators/individual/cbc.py +91 -67
  930. scitex/scholar/url_finder/translators/individual/ccfr_bnf.py +49 -53
  931. scitex/scholar/url_finder/translators/individual/cia_world_factbook.py +43 -33
  932. scitex/scholar/url_finder/translators/individual/crossref_rest.py +208 -174
  933. scitex/scholar/url_finder/translators/individual/current_affairs.py +29 -35
  934. scitex/scholar/url_finder/translators/individual/dabi.py +70 -66
  935. scitex/scholar/url_finder/translators/individual/dagens_nyheter.py +3 -1
  936. scitex/scholar/url_finder/translators/individual/dagstuhl.py +10 -15
  937. scitex/scholar/url_finder/translators/individual/dar_almandumah.py +13 -9
  938. scitex/scholar/url_finder/translators/individual/dart_europe.py +19 -22
  939. scitex/scholar/url_finder/translators/individual/data_gov.py +2 -2
  940. scitex/scholar/url_finder/translators/individual/databrary.py +27 -28
  941. scitex/scholar/url_finder/translators/individual/datacite_json.py +152 -137
  942. scitex/scholar/url_finder/translators/individual/dataverse.py +68 -64
  943. scitex/scholar/url_finder/translators/individual/daum_news.py +38 -38
  944. scitex/scholar/url_finder/translators/individual/dblp.py +4 -8
  945. scitex/scholar/url_finder/translators/individual/dblp_computer_science_bibliography.py +8 -3
  946. scitex/scholar/url_finder/translators/individual/dbpia.py +5 -3
  947. scitex/scholar/url_finder/translators/individual/defense_technical_information_center.py +30 -28
  948. scitex/scholar/url_finder/translators/individual/delpher.py +102 -79
  949. scitex/scholar/url_finder/translators/individual/demographic_research.py +35 -31
  950. scitex/scholar/url_finder/translators/individual/denik_cz.py +58 -54
  951. scitex/scholar/url_finder/translators/individual/depatisnet.py +7 -10
  952. scitex/scholar/url_finder/translators/individual/der_freitag.py +81 -66
  953. scitex/scholar/url_finder/translators/individual/der_spiegel.py +56 -54
  954. scitex/scholar/url_finder/translators/individual/digibib_net.py +3 -1
  955. scitex/scholar/url_finder/translators/individual/digizeitschriften.py +3 -1
  956. scitex/scholar/url_finder/translators/individual/dpla.py +13 -14
  957. scitex/scholar/url_finder/translators/individual/dspace.py +2 -2
  958. scitex/scholar/url_finder/translators/individual/ebrary.py +3 -1
  959. scitex/scholar/url_finder/translators/individual/ebscohost.py +3 -1
  960. scitex/scholar/url_finder/translators/individual/electronic_colloquium_on_computational_complexity.py +3 -1
  961. scitex/scholar/url_finder/translators/individual/elife.py +3 -1
  962. scitex/scholar/url_finder/translators/individual/elsevier_health_journals.py +3 -1
  963. scitex/scholar/url_finder/translators/individual/emerald.py +3 -1
  964. scitex/scholar/url_finder/translators/individual/emerald_insight.py +3 -1
  965. scitex/scholar/url_finder/translators/individual/epicurious.py +3 -1
  966. scitex/scholar/url_finder/translators/individual/eurogamerusgamer.py +3 -1
  967. scitex/scholar/url_finder/translators/individual/fachportal_padagogik.py +3 -1
  968. scitex/scholar/url_finder/translators/individual/frontiers.py +1 -1
  969. scitex/scholar/url_finder/translators/individual/gale_databases.py +3 -1
  970. scitex/scholar/url_finder/translators/individual/gms_german_medical_science.py +6 -2
  971. scitex/scholar/url_finder/translators/individual/ieee_computer_society.py +6 -2
  972. scitex/scholar/url_finder/translators/individual/ieee_xplore.py +41 -35
  973. scitex/scholar/url_finder/translators/individual/inter_research_science_center.py +6 -2
  974. scitex/scholar/url_finder/translators/individual/jisc_historical_texts.py +3 -1
  975. scitex/scholar/url_finder/translators/individual/jstor.py +14 -12
  976. scitex/scholar/url_finder/translators/individual/korean_national_library.py +3 -1
  977. scitex/scholar/url_finder/translators/individual/la_times.py +3 -1
  978. scitex/scholar/url_finder/translators/individual/landesbibliographie_baden_wurttemberg.py +3 -1
  979. scitex/scholar/url_finder/translators/individual/legislative_insight.py +3 -1
  980. scitex/scholar/url_finder/translators/individual/libraries_tasmania.py +3 -1
  981. scitex/scholar/url_finder/translators/individual/library_catalog__koha_.py +3 -1
  982. scitex/scholar/url_finder/translators/individual/lingbuzz.py +2 -2
  983. scitex/scholar/url_finder/translators/individual/max_planck_institute_for_the_history_of_science_virtual_laboratory_library.py +3 -1
  984. scitex/scholar/url_finder/translators/individual/mdpi.py +12 -6
  985. scitex/scholar/url_finder/translators/individual/microbiology_society_journals.py +3 -1
  986. scitex/scholar/url_finder/translators/individual/midas_journals.py +3 -1
  987. scitex/scholar/url_finder/translators/individual/nagoya_university_opac.py +3 -1
  988. scitex/scholar/url_finder/translators/individual/nature_publishing_group.py +32 -19
  989. scitex/scholar/url_finder/translators/individual/ntsb_accident_reports.py +3 -1
  990. scitex/scholar/url_finder/translators/individual/openedition_journals.py +8 -4
  991. scitex/scholar/url_finder/translators/individual/orcid.py +16 -15
  992. scitex/scholar/url_finder/translators/individual/oxford.py +25 -19
  993. scitex/scholar/url_finder/translators/individual/oxford_dictionaries_premium.py +3 -1
  994. scitex/scholar/url_finder/translators/individual/ozon_ru.py +3 -1
  995. scitex/scholar/url_finder/translators/individual/plos.py +9 -12
  996. scitex/scholar/url_finder/translators/individual/polygon.py +3 -1
  997. scitex/scholar/url_finder/translators/individual/primo.py +3 -1
  998. scitex/scholar/url_finder/translators/individual/project_muse.py +3 -1
  999. scitex/scholar/url_finder/translators/individual/pubfactory_journals.py +3 -1
  1000. scitex/scholar/url_finder/translators/individual/pubmed.py +71 -65
  1001. scitex/scholar/url_finder/translators/individual/pubmed_central.py +8 -6
  1002. scitex/scholar/url_finder/translators/individual/rechtspraak_nl.py +3 -1
  1003. scitex/scholar/url_finder/translators/individual/sage_journals.py +25 -17
  1004. scitex/scholar/url_finder/translators/individual/sciencedirect.py +36 -17
  1005. scitex/scholar/url_finder/translators/individual/semantics_visual_library.py +3 -1
  1006. scitex/scholar/url_finder/translators/individual/silverchair.py +70 -52
  1007. scitex/scholar/url_finder/translators/individual/sora.py +3 -1
  1008. scitex/scholar/url_finder/translators/individual/springer.py +15 -11
  1009. scitex/scholar/url_finder/translators/individual/ssrn.py +3 -3
  1010. scitex/scholar/url_finder/translators/individual/stanford_encyclopedia_of_philosophy.py +3 -1
  1011. scitex/scholar/url_finder/translators/individual/superlib.py +3 -1
  1012. scitex/scholar/url_finder/translators/individual/treesearch.py +3 -1
  1013. scitex/scholar/url_finder/translators/individual/university_of_chicago_press_books.py +3 -1
  1014. scitex/scholar/url_finder/translators/individual/vlex.py +3 -1
  1015. scitex/scholar/url_finder/translators/individual/web_of_science.py +3 -1
  1016. scitex/scholar/url_finder/translators/individual/web_of_science_nextgen.py +3 -1
  1017. scitex/scholar/url_finder/translators/individual/wiley.py +31 -25
  1018. scitex/scholar/url_finder/translators/individual/wilson_center_digital_archive.py +3 -1
  1019. scitex/scholar/utils/bibtex/_parse_bibtex.py +3 -3
  1020. scitex/scholar/utils/cleanup/_cleanup_scholar_processes.py +5 -9
  1021. scitex/scholar/utils/text/_TextNormalizer.py +249 -176
  1022. scitex/scholar/utils/validation/DOIValidator.py +31 -28
  1023. scitex/scholar/utils/validation/__init__.py +0 -0
  1024. scitex/scholar/utils/validation/validate_library_dois.py +61 -57
  1025. scitex/scholar/zotero/__init__.py +1 -1
  1026. scitex/security/cli.py +7 -20
  1027. scitex/security/github.py +45 -32
  1028. scitex/session/__init__.py +8 -9
  1029. scitex/session/_decorator.py +49 -42
  1030. scitex/session/_lifecycle.py +39 -39
  1031. scitex/session/_manager.py +24 -20
  1032. scitex/sh/__init__.py +4 -3
  1033. scitex/sh/_execute.py +10 -7
  1034. scitex/sh/_security.py +3 -3
  1035. scitex/sh/_types.py +2 -3
  1036. scitex/stats/__init__.py +174 -6
  1037. scitex/stats/_schema.py +42 -569
  1038. scitex/stats/auto/__init__.py +188 -0
  1039. scitex/stats/auto/_context.py +331 -0
  1040. scitex/stats/auto/_formatting.py +679 -0
  1041. scitex/stats/auto/_rules.py +901 -0
  1042. scitex/stats/auto/_selector.py +554 -0
  1043. scitex/stats/auto/_styles.py +721 -0
  1044. scitex/stats/correct/__init__.py +4 -4
  1045. scitex/stats/correct/_correct_bonferroni.py +43 -34
  1046. scitex/stats/correct/_correct_fdr.py +14 -40
  1047. scitex/stats/correct/_correct_fdr_.py +39 -46
  1048. scitex/stats/correct/_correct_holm.py +14 -32
  1049. scitex/stats/correct/_correct_sidak.py +36 -21
  1050. scitex/stats/descriptive/_circular.py +20 -21
  1051. scitex/stats/descriptive/_describe.py +19 -5
  1052. scitex/stats/descriptive/_nan.py +5 -7
  1053. scitex/stats/descriptive/_real.py +4 -3
  1054. scitex/stats/effect_sizes/__init__.py +10 -11
  1055. scitex/stats/effect_sizes/_cliffs_delta.py +35 -32
  1056. scitex/stats/effect_sizes/_cohens_d.py +30 -31
  1057. scitex/stats/effect_sizes/_epsilon_squared.py +19 -22
  1058. scitex/stats/effect_sizes/_eta_squared.py +23 -27
  1059. scitex/stats/effect_sizes/_prob_superiority.py +18 -21
  1060. scitex/stats/io/__init__.py +29 -0
  1061. scitex/stats/io/_bundle.py +156 -0
  1062. scitex/stats/posthoc/__init__.py +3 -3
  1063. scitex/stats/posthoc/_dunnett.py +75 -55
  1064. scitex/stats/posthoc/_games_howell.py +61 -43
  1065. scitex/stats/posthoc/_tukey_hsd.py +42 -34
  1066. scitex/stats/power/__init__.py +2 -2
  1067. scitex/stats/power/_power.py +56 -56
  1068. scitex/stats/tests/__init__.py +1 -1
  1069. scitex/stats/tests/correlation/__init__.py +1 -1
  1070. scitex/stats/tests/correlation/_test_pearson.py +28 -38
  1071. scitex/stats/utils/__init__.py +14 -17
  1072. scitex/stats/utils/_effect_size.py +85 -78
  1073. scitex/stats/utils/_formatters.py +49 -43
  1074. scitex/stats/utils/_normalizers.py +7 -14
  1075. scitex/stats/utils/_power.py +56 -56
  1076. scitex/str/__init__.py +1 -0
  1077. scitex/str/_clean_path.py +3 -3
  1078. scitex/str/_factor_out_digits.py +86 -58
  1079. scitex/str/_format_plot_text.py +180 -111
  1080. scitex/str/_latex.py +19 -19
  1081. scitex/str/_latex_fallback.py +9 -10
  1082. scitex/str/_parse.py +3 -6
  1083. scitex/str/_print_debug.py +13 -13
  1084. scitex/str/_printc.py +2 -0
  1085. scitex/str/_search.py +3 -3
  1086. scitex/template/.legacy/_clone_project.py +9 -13
  1087. scitex/template/__init__.py +10 -2
  1088. scitex/template/_clone_project.py +7 -2
  1089. scitex/template/_copy.py +1 -0
  1090. scitex/template/_customize.py +3 -6
  1091. scitex/template/_git_strategy.py +2 -3
  1092. scitex/template/_rename.py +1 -0
  1093. scitex/template/clone_pip_project.py +6 -7
  1094. scitex/template/clone_research.py +7 -10
  1095. scitex/template/clone_singularity.py +6 -7
  1096. scitex/template/clone_writer_directory.py +6 -7
  1097. scitex/tex/__init__.py +4 -0
  1098. scitex/tex/_export.py +890 -0
  1099. scitex/tex/_preview.py +26 -11
  1100. scitex/tex/_to_vec.py +10 -7
  1101. scitex/torch/__init__.py +11 -1
  1102. scitex/types/_ArrayLike.py +2 -0
  1103. scitex/types/_is_listed_X.py +3 -3
  1104. scitex/units.py +110 -77
  1105. scitex/utils/_compress_hdf5.py +3 -3
  1106. scitex/utils/_email.py +8 -4
  1107. scitex/utils/_notify.py +14 -8
  1108. scitex/utils/_search.py +6 -6
  1109. scitex/utils/_verify_scitex_format.py +17 -42
  1110. scitex/utils/_verify_scitex_format_v01.py +12 -34
  1111. scitex/utils/template.py +4 -3
  1112. scitex/web/__init__.py +7 -1
  1113. scitex/web/_scraping.py +54 -38
  1114. scitex/web/_search_pubmed.py +30 -14
  1115. scitex/writer/.legacy/Writer_v01-refactored.py +4 -4
  1116. scitex/writer/.legacy/_compile.py +18 -28
  1117. scitex/writer/Writer.py +8 -21
  1118. scitex/writer/__init__.py +11 -11
  1119. scitex/writer/_clone_writer_project.py +2 -6
  1120. scitex/writer/_compile/__init__.py +1 -0
  1121. scitex/writer/_compile/_parser.py +1 -0
  1122. scitex/writer/_compile/_runner.py +35 -38
  1123. scitex/writer/_compile/_validator.py +1 -0
  1124. scitex/writer/_compile/manuscript.py +1 -0
  1125. scitex/writer/_compile/revision.py +1 -0
  1126. scitex/writer/_compile/supplementary.py +1 -0
  1127. scitex/writer/_compile_async.py +5 -12
  1128. scitex/writer/_project/__init__.py +1 -0
  1129. scitex/writer/_project/_create.py +10 -25
  1130. scitex/writer/_project/_trees.py +4 -9
  1131. scitex/writer/_project/_validate.py +2 -3
  1132. scitex/writer/_validate_tree_structures.py +7 -18
  1133. scitex/writer/dataclasses/__init__.py +8 -10
  1134. scitex/writer/dataclasses/config/_CONSTANTS.py +2 -3
  1135. scitex/writer/dataclasses/config/_WriterConfig.py +4 -9
  1136. scitex/writer/dataclasses/contents/_ManuscriptContents.py +14 -25
  1137. scitex/writer/dataclasses/contents/_RevisionContents.py +21 -16
  1138. scitex/writer/dataclasses/contents/_SupplementaryContents.py +21 -24
  1139. scitex/writer/dataclasses/core/_Document.py +2 -3
  1140. scitex/writer/dataclasses/core/_DocumentSection.py +8 -23
  1141. scitex/writer/dataclasses/results/_CompilationResult.py +2 -3
  1142. scitex/writer/dataclasses/results/_LaTeXIssue.py +3 -6
  1143. scitex/writer/dataclasses/results/_SaveSectionsResponse.py +20 -9
  1144. scitex/writer/dataclasses/results/_SectionReadResponse.py +24 -10
  1145. scitex/writer/dataclasses/tree/_ConfigTree.py +7 -4
  1146. scitex/writer/dataclasses/tree/_ManuscriptTree.py +10 -13
  1147. scitex/writer/dataclasses/tree/_RevisionTree.py +16 -17
  1148. scitex/writer/dataclasses/tree/_ScriptsTree.py +10 -5
  1149. scitex/writer/dataclasses/tree/_SharedTree.py +10 -13
  1150. scitex/writer/dataclasses/tree/_SupplementaryTree.py +15 -14
  1151. scitex/writer/utils/.legacy_git_retry.py +3 -8
  1152. scitex/writer/utils/_parse_latex_logs.py +2 -3
  1153. scitex/writer/utils/_parse_script_args.py +20 -23
  1154. scitex/writer/utils/_watch.py +5 -5
  1155. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/METADATA +14 -10
  1156. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/RECORD +1149 -985
  1157. scitex/db/_sqlite3/_SQLite3Mixins/_ColumnMixin_v01-indentation-issues.py +0 -583
  1158. scitex/io/memo.md +0 -2827
  1159. scitex/plt/_subplots/TODO.md +0 -53
  1160. scitex/plt/_subplots/_AxisWrapperMixins/_AdjustmentMixin.py +0 -537
  1161. scitex/plt/_subplots/_AxisWrapperMixins/_MatplotlibPlotMixin.py +0 -1499
  1162. scitex/plt/_subplots/_AxisWrapperMixins/_SeabornMixin.py +0 -431
  1163. scitex/plt/_subplots/_export_as_csv_formatters.py +0 -112
  1164. scitex/vis/__init__.py +0 -177
  1165. scitex/vis/editor/_defaults.py +0 -244
  1166. scitex/vis/editor/_edit.py +0 -378
  1167. scitex/vis/editor/flask_editor/__init__.py +0 -21
  1168. scitex/vis/editor/flask_editor/bbox.py +0 -216
  1169. scitex/vis/editor/flask_editor/core.py +0 -152
  1170. scitex/vis/editor/flask_editor/plotter.py +0 -130
  1171. scitex/vis/editor/flask_editor/renderer.py +0 -184
  1172. scitex/vis/editor/flask_editor/templates/html.py +0 -295
  1173. scitex/vis/editor/flask_editor/templates/scripts.py +0 -614
  1174. scitex/vis/editor/flask_editor/templates/styles.py +0 -549
  1175. /scitex/{vis → fig}/README.md +0 -0
  1176. /scitex/{vis → fig}/docs/CANVAS_ARCHITECTURE.md +0 -0
  1177. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/WHEEL +0 -0
  1178. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/entry_points.txt +0 -0
  1179. {scitex-2.5.0.dist-info → scitex-2.7.3.dist-info}/licenses/LICENSE +0 -0
@@ -5,9 +5,8 @@
5
5
  # ----------------------------------------
6
6
  from __future__ import annotations
7
7
  import os
8
- __FILE__ = (
9
- "./src/scitex/scholar/core/Scholar.py"
10
- )
8
+
9
+ __FILE__ = "./src/scitex/scholar/core/Scholar.py"
11
10
  __DIR__ = os.path.dirname(__FILE__)
12
11
  # ----------------------------------------
13
12
 
@@ -136,15 +135,11 @@ class Scholar:
136
135
 
137
136
  # Initialize service components (lazy loading for better performance)
138
137
  # Use mangled names for private properties
139
- self._Scholar__scholar_engine = (
140
- None # Replaces DOIResolver and LibraryEnricher
141
- )
138
+ self._Scholar__scholar_engine = None # Replaces DOIResolver and LibraryEnricher
142
139
  self._Scholar__auth_manager = None
143
140
  self._Scholar__browser_manager = None
144
141
  self._Scholar__library_manager = None
145
- self._Scholar__library = (
146
- None # ScholarLibrary for high-level operations
147
- )
142
+ self._Scholar__library = None # ScholarLibrary for high-level operations
148
143
 
149
144
  # Show user-friendly initialization message with library location
150
145
  library_path = self.config.get_library_project_dir()
@@ -154,9 +149,7 @@ class Scholar:
154
149
  f"Scholar initialized with project '{project}' at {project_path}"
155
150
  )
156
151
  else:
157
- logger.info(
158
- f"{self.name}: Scholar initialized (library: {library_path})"
159
- )
152
+ logger.info(f"{self.name}: Scholar initialized (library: {library_path})")
160
153
 
161
154
  # ----------------------------------------
162
155
  # Enrichers
@@ -196,9 +189,7 @@ class Scholar:
196
189
  logger.warning(
197
190
  f"{self.name}: Failed to enrich paper '{title[:50]}...': {e}"
198
191
  )
199
- enriched_list.append(
200
- paper
201
- ) # Keep original if enrichment fails
192
+ enriched_list.append(paper) # Keep original if enrichment fails
202
193
 
203
194
  enriched_papers = Papers(enriched_list, project=self.project)
204
195
 
@@ -256,9 +247,7 @@ class Scholar:
256
247
  logger.warning(
257
248
  f"{self.name}: Failed to enrich paper '{title[:50]}...': {e}"
258
249
  )
259
- enriched_list.append(
260
- paper
261
- ) # Keep original if enrichment fails
250
+ enriched_list.append(paper) # Keep original if enrichment fails
262
251
 
263
252
  enriched_papers = Papers(enriched_list, project=self.project)
264
253
 
@@ -309,10 +298,7 @@ class Scholar:
309
298
  enriched.metadata.set_doi(results["id"]["doi"])
310
299
  if results["id"].get("pmid") and not enriched.metadata.id.pmid:
311
300
  enriched.metadata.id.pmid = results["id"]["pmid"]
312
- if (
313
- results["id"].get("arxiv_id")
314
- and not enriched.metadata.id.arxiv_id
315
- ):
301
+ if results["id"].get("arxiv_id") and not enriched.metadata.id.arxiv_id:
316
302
  enriched.metadata.id.arxiv_id = results["id"]["arxiv_id"]
317
303
  # Note: corpus_id, semantic_id, ieee_id are in results but not in Paper dataclass
318
304
 
@@ -330,17 +316,11 @@ class Scholar:
330
316
  enriched.metadata.basic.title = new_title
331
317
 
332
318
  # Update authors if found
333
- if (
334
- results["basic"].get("authors")
335
- and not enriched.metadata.basic.authors
336
- ):
319
+ if results["basic"].get("authors") and not enriched.metadata.basic.authors:
337
320
  enriched.metadata.basic.authors = results["basic"]["authors"]
338
321
 
339
322
  # Update year if found
340
- if (
341
- results["basic"].get("year")
342
- and not enriched.metadata.basic.year
343
- ):
323
+ if results["basic"].get("year") and not enriched.metadata.basic.year:
344
324
  enriched.metadata.basic.year = results["basic"]["year"]
345
325
 
346
326
  # Update keywords if found
@@ -363,30 +343,24 @@ class Scholar:
363
343
  results["publication"].get("publisher")
364
344
  and not enriched.metadata.publication.publisher
365
345
  ):
366
- enriched.metadata.publication.publisher = results[
367
- "publication"
368
- ]["publisher"]
346
+ enriched.metadata.publication.publisher = results["publication"][
347
+ "publisher"
348
+ ]
369
349
  if (
370
350
  results["publication"].get("volume")
371
351
  and not enriched.metadata.publication.volume
372
352
  ):
373
- enriched.metadata.publication.volume = results["publication"][
374
- "volume"
375
- ]
353
+ enriched.metadata.publication.volume = results["publication"]["volume"]
376
354
  if (
377
355
  results["publication"].get("issue")
378
356
  and not enriched.metadata.publication.issue
379
357
  ):
380
- enriched.metadata.publication.issue = results["publication"][
381
- "issue"
382
- ]
358
+ enriched.metadata.publication.issue = results["publication"]["issue"]
383
359
  if (
384
360
  results["publication"].get("pages")
385
361
  and not enriched.metadata.publication.pages
386
362
  ):
387
- enriched.metadata.publication.pages = results["publication"][
388
- "pages"
389
- ]
363
+ enriched.metadata.publication.pages = results["publication"]["pages"]
390
364
 
391
365
  # Citation metadata
392
366
  if "citation_count" in results:
@@ -406,16 +380,11 @@ class Scholar:
406
380
  if results["url"].get("pdf"):
407
381
  # Check if this PDF is not already in the list
408
382
  pdf_url = results["url"]["pdf"]
409
- if not any(
410
- p.get("url") == pdf_url for p in enriched.metadata.url.pdfs
411
- ):
383
+ if not any(p.get("url") == pdf_url for p in enriched.metadata.url.pdfs):
412
384
  enriched.metadata.url.pdfs.append(
413
385
  {"url": pdf_url, "source": "enrichment"}
414
386
  )
415
- if (
416
- results["url"].get("url")
417
- and not enriched.metadata.url.publisher
418
- ):
387
+ if results["url"].get("url") and not enriched.metadata.url.publisher:
419
388
  enriched.metadata.url.publisher = results["url"]["url"]
420
389
 
421
390
  # Note: Metrics section (journal_impact_factor, h_index) not stored in Paper dataclass
@@ -446,8 +415,7 @@ class Scholar:
446
415
  enriched_count = sum(
447
416
  1
448
417
  for i, p in enumerate(enriched_papers)
449
- if p.abstract
450
- and not papers[i].abstract # Check if abstract was added
418
+ if p.abstract and not papers[i].abstract # Check if abstract was added
451
419
  )
452
420
 
453
421
  # Save enriched papers back to library
@@ -463,9 +431,7 @@ class Scholar:
463
431
  # ----------------------------------------
464
432
  # URL Finding (Orchestration)
465
433
  # ----------------------------------------
466
- async def _find_urls_for_doi_async(
467
- self, doi: str, context
468
- ) -> Dict[str, Any]:
434
+ async def _find_urls_for_doi_async(self, doi: str, context) -> Dict[str, Any]:
469
435
  """Find all URLs for a DOI (orchestration layer).
470
436
 
471
437
  Workflow:
@@ -495,10 +461,8 @@ class Scholar:
495
461
  # Step 1: Resolve publisher URL
496
462
  page = await context.new_page()
497
463
  try:
498
- url_publisher = (
499
- await resolve_publisher_url_by_navigating_to_doi_page(
500
- doi, page
501
- )
464
+ url_publisher = await resolve_publisher_url_by_navigating_to_doi_page(
465
+ doi, page
502
466
  )
503
467
  urls["url_publisher"] = url_publisher
504
468
  finally:
@@ -516,22 +480,16 @@ class Scholar:
516
480
  openurl_resolver = OpenURLResolver(config=self.config)
517
481
  page = await context.new_page()
518
482
  try:
519
- url_openurl_resolved = await openurl_resolver.resolve_doi(
520
- doi, page
521
- )
483
+ url_openurl_resolved = await openurl_resolver.resolve_doi(doi, page)
522
484
  urls["url_openurl_resolved"] = url_openurl_resolved
523
485
 
524
486
  if url_openurl_resolved and url_openurl_resolved != "skipped":
525
- urls_pdf = await url_finder.find_pdf_urls(
526
- url_openurl_resolved
527
- )
487
+ urls_pdf = await url_finder.find_pdf_urls(url_openurl_resolved)
528
488
  finally:
529
489
  await page.close()
530
490
 
531
491
  # Deduplicate and store
532
- urls["urls_pdf"] = (
533
- self._deduplicate_pdf_urls(urls_pdf) if urls_pdf else []
534
- )
492
+ urls["urls_pdf"] = self._deduplicate_pdf_urls(urls_pdf) if urls_pdf else []
535
493
 
536
494
  return urls
537
495
 
@@ -576,9 +534,10 @@ class Scholar:
576
534
  return {"downloaded": 0, "failed": 0, "errors": 0}
577
535
 
578
536
  # Get authenticated browser context
579
- browser, context = (
580
- await self._browser_manager.get_authenticated_browser_and_context_async()
581
- )
537
+ (
538
+ browser,
539
+ context,
540
+ ) = await self._browser_manager.get_authenticated_browser_and_context_async()
582
541
 
583
542
  try:
584
543
  # Initialize PDF downloader with browser context
@@ -613,14 +572,14 @@ class Scholar:
613
572
  temp_pdf_path = downloaded_paths[0]
614
573
 
615
574
  # Generate paper ID and create storage
616
- paper_id = self.config.path_manager._generate_paper_id(
617
- doi=doi
618
- )
575
+ paper_id = self.config.path_manager._generate_paper_id(doi=doi)
619
576
  storage_path = master_dir / paper_id
620
577
  storage_path.mkdir(parents=True, exist_ok=True)
621
578
 
622
579
  # Move PDF to MASTER library
623
- pdf_filename = f"DOI_{doi.replace('/', '_').replace(':', '_')}.pdf"
580
+ pdf_filename = (
581
+ f"DOI_{doi.replace('/', '_').replace(':', '_')}.pdf"
582
+ )
624
583
  master_pdf_path = storage_path / pdf_filename
625
584
  shutil.move(str(temp_pdf_path), str(master_pdf_path))
626
585
 
@@ -641,18 +600,12 @@ class Scholar:
641
600
  metadata["pdf_path"] = str(
642
601
  master_pdf_path.relative_to(library_dir)
643
602
  )
644
- metadata["pdf_downloaded_at"] = (
645
- datetime.now().isoformat()
646
- )
647
- metadata["pdf_size_bytes"] = (
648
- master_pdf_path.stat().st_size
649
- )
603
+ metadata["pdf_downloaded_at"] = datetime.now().isoformat()
604
+ metadata["pdf_size_bytes"] = master_pdf_path.stat().st_size
650
605
  metadata["updated_at"] = datetime.now().isoformat()
651
606
 
652
607
  with open(metadata_file, "w") as f:
653
- json.dump(
654
- metadata, f, indent=2, ensure_ascii=False
655
- )
608
+ json.dump(metadata, f, indent=2, ensure_ascii=False)
656
609
 
657
610
  # Update symlink using LibraryManager
658
611
  if self.project not in ["master", "MASTER"]:
@@ -666,15 +619,11 @@ class Scholar:
666
619
  )
667
620
  stats["downloaded"] += 1
668
621
  else:
669
- logger.warning(
670
- f"{self.name}: No PDF downloaded for DOI: {doi}"
671
- )
622
+ logger.warning(f"{self.name}: No PDF downloaded for DOI: {doi}")
672
623
  stats["failed"] += 1
673
624
 
674
625
  except Exception as e:
675
- logger.error(
676
- f"{self.name}: Failed to organize PDF for {doi}: {e}"
677
- )
626
+ logger.error(f"{self.name}: Failed to organize PDF for {doi}: {e}")
678
627
  stats["errors"] += 1
679
628
  stats["failed"] += 1
680
629
 
@@ -691,9 +640,10 @@ class Scholar:
691
640
  results = {"downloaded": 0, "failed": 0, "errors": 0}
692
641
 
693
642
  # Get authenticated browser context
694
- browser, context = (
695
- await self._browser_manager.get_authenticated_browser_and_context_async()
696
- )
643
+ (
644
+ browser,
645
+ context,
646
+ ) = await self._browser_manager.get_authenticated_browser_and_context_async()
697
647
 
698
648
  # Initialize authentication gateway (NEW)
699
649
  auth_gateway = AuthenticationGateway(
@@ -731,9 +681,7 @@ class Scholar:
731
681
  pdf_urls = urls.get("urls_pdf", [])
732
682
 
733
683
  if not pdf_urls:
734
- logger.warning(
735
- f"{self.name}: No PDF URLs found for DOI: {doi}"
736
- )
684
+ logger.warning(f"{self.name}: No PDF URLs found for DOI: {doi}")
737
685
  results["failed"] += 1
738
686
  continue
739
687
 
@@ -752,8 +700,7 @@ class Scholar:
752
700
 
753
701
  # Download to temp location first
754
702
  temp_output = (
755
- Path("/tmp")
756
- / f"{doi.replace('/', '_').replace(':', '_')}.pdf"
703
+ Path("/tmp") / f"{doi.replace('/', '_').replace(':', '_')}.pdf"
757
704
  )
758
705
 
759
706
  # Download PDF using simple downloader
@@ -769,9 +716,7 @@ class Scholar:
769
716
  # Step 4: Store PDF in MASTER library with proper organization
770
717
 
771
718
  # Generate unique ID from DOI using PathManager
772
- paper_id = self.config.path_manager._generate_paper_id(
773
- doi=doi
774
- )
719
+ paper_id = self.config.path_manager._generate_paper_id(doi=doi)
775
720
 
776
721
  # Create MASTER storage directory
777
722
  storage_path = master_dir / paper_id
@@ -817,23 +762,17 @@ class Scholar:
817
762
  journal_clean = "Unknown"
818
763
 
819
764
  # Format: Author-Year-Journal
820
- readable_name = (
821
- f"{first_author}-{year_str}-{journal_clean}"
822
- )
765
+ readable_name = f"{first_author}-{year_str}-{journal_clean}"
823
766
  except:
824
767
  pass
825
768
 
826
769
  # Fallback to DOI if metadata extraction failed
827
770
  if not readable_name:
828
- readable_name = (
829
- f"DOI_{doi.replace('/', '_').replace(':', '_')}"
830
- )
771
+ readable_name = f"DOI_{doi.replace('/', '_').replace(':', '_')}"
831
772
 
832
773
  # Copy PDF to MASTER storage with ORIGINAL filename to track how downloaded
833
774
  # The PDF filename preserves the DOI format for tracking
834
- pdf_filename = (
835
- f"DOI_{doi.replace('/', '_').replace(':', '_')}.pdf"
836
- )
775
+ pdf_filename = f"DOI_{doi.replace('/', '_').replace(':', '_')}.pdf"
837
776
  master_pdf_path = storage_path / pdf_filename
838
777
  shutil.copy2(downloaded_path, master_pdf_path)
839
778
 
@@ -868,9 +807,7 @@ class Scholar:
868
807
  metadata[key] = value
869
808
 
870
809
  # Add PDF information
871
- metadata["pdf_path"] = str(
872
- master_pdf_path.relative_to(library_dir)
873
- )
810
+ metadata["pdf_path"] = str(master_pdf_path.relative_to(library_dir))
874
811
  metadata["pdf_downloaded_at"] = datetime.now().isoformat()
875
812
  metadata["pdf_size_bytes"] = master_pdf_path.stat().st_size
876
813
  metadata["updated_at"] = datetime.now().isoformat()
@@ -922,9 +859,7 @@ class Scholar:
922
859
  """
923
860
  import asyncio
924
861
 
925
- return asyncio.run(
926
- self.download_pdfs_from_dois_async(dois, output_dir)
927
- )
862
+ return asyncio.run(self.download_pdfs_from_dois_async(dois, output_dir))
928
863
 
929
864
  def download_pdfs_from_bibtex(
930
865
  self,
@@ -947,14 +882,10 @@ class Scholar:
947
882
  papers = self.load_bibtex(bibtex_input)
948
883
 
949
884
  # Extract DOIs from papers
950
- dois = [
951
- paper.metadata.id.doi for paper in papers if paper.metadata.id.doi
952
- ]
885
+ dois = [paper.metadata.id.doi for paper in papers if paper.metadata.id.doi]
953
886
 
954
887
  if not dois:
955
- logger.warning(
956
- f"{self.name}: No papers with DOIs found in BibTeX input"
957
- )
888
+ logger.warning(f"{self.name}: No papers with DOIs found in BibTeX input")
958
889
  return {"downloaded": 0, "failed": 0, "errors": 0}
959
890
 
960
891
  logger.info(
@@ -985,9 +916,7 @@ class Scholar:
985
916
  from ..core.Paper import Paper
986
917
  import json
987
918
 
988
- logger.info(
989
- f"{self.name}: Loading papers from project: {project_name}"
990
- )
919
+ logger.info(f"{self.name}: Loading papers from project: {project_name}")
991
920
 
992
921
  library_dir = self.config.get_library_project_dir()
993
922
  project_dir = library_dir / project_name
@@ -1044,21 +973,15 @@ class Scholar:
1044
973
  # Convert to Papers collection
1045
974
  from .Papers import Papers
1046
975
 
1047
- papers_collection = Papers(
1048
- papers, config=self.config, project=self.project
1049
- )
1050
- papers_collection.library = (
1051
- self._library
1052
- ) # Attach library for save operations
976
+ papers_collection = Papers(papers, config=self.config, project=self.project)
977
+ papers_collection.library = self._library # Attach library for save operations
1053
978
 
1054
979
  return papers_collection
1055
980
 
1056
981
  # ----------------------------------------
1057
982
  # Searchers
1058
983
  # ----------------------------------------
1059
- def search_library(
1060
- self, query: str, project: Optional[str] = None
1061
- ) -> Papers:
984
+ def search_library(self, query: str, project: Optional[str] = None) -> Papers:
1062
985
  """
1063
986
  Search papers in local library.
1064
987
 
@@ -1114,9 +1037,7 @@ class Scholar:
1114
1037
  ]
1115
1038
  all_papers.extend(matching_papers)
1116
1039
  except Exception as e:
1117
- logger.debug(
1118
- f"{self.name}: Failed to search project {project}: {e}"
1119
- )
1040
+ logger.debug(f"{self.name}: Failed to search project {project}: {e}")
1120
1041
 
1121
1042
  return Papers(all_papers, config=self.config, project="search_results")
1122
1043
 
@@ -1159,9 +1080,7 @@ class Scholar:
1159
1080
  """
1160
1081
  from ..storage.BibTeXHandler import BibTeXHandler
1161
1082
 
1162
- bibtex_handler = BibTeXHandler(
1163
- project=self.project, config=self.config
1164
- )
1083
+ bibtex_handler = BibTeXHandler(project=self.project, config=self.config)
1165
1084
  return bibtex_handler.papers_to_bibtex(papers, output_path)
1166
1085
 
1167
1086
  # ----------------------------------------
@@ -1185,25 +1104,19 @@ class Scholar:
1185
1104
  # Create project and info directories
1186
1105
  if not project_dir.exists():
1187
1106
  project_dir.mkdir(parents=True, exist_ok=True)
1188
- logger.info(
1189
- f"{self.name}: Auto-created project directory: {project}"
1190
- )
1107
+ logger.info(f"{self.name}: Auto-created project directory: {project}")
1191
1108
 
1192
1109
  # Ensure info directory exists
1193
1110
  info_dir.mkdir(parents=True, exist_ok=True)
1194
1111
 
1195
1112
  # Create/move metadata file to info directory
1196
- old_metadata_file = (
1197
- project_dir / "project_metadata.json"
1198
- ) # Old location
1113
+ old_metadata_file = project_dir / "project_metadata.json" # Old location
1199
1114
  metadata_file = info_dir / "project_metadata.json" # New location
1200
1115
 
1201
1116
  # Move existing metadata file if it exists in old location
1202
1117
  if old_metadata_file.exists() and not metadata_file.exists():
1203
1118
  shutil.move(str(old_metadata_file), str(metadata_file))
1204
- logger.info(
1205
- f"{self.name}: Moved project metadata to info directory"
1206
- )
1119
+ logger.info(f"{self.name}: Moved project metadata to info directory")
1207
1120
 
1208
1121
  # Create metadata file if it doesn't exist
1209
1122
  if not metadata_file.exists():
@@ -1268,9 +1181,7 @@ class Scholar:
1268
1181
  metadata = json.load(f)
1269
1182
  project_info.update(metadata)
1270
1183
  except Exception as e:
1271
- logger.debug(
1272
- f"Failed to load metadata for {item.name}: {e}"
1273
- )
1184
+ logger.debug(f"Failed to load metadata for {item.name}: {e}")
1274
1185
 
1275
1186
  projects.append(project_info)
1276
1187
 
@@ -1399,13 +1310,13 @@ class Scholar:
1399
1310
 
1400
1311
  project = project or self.project
1401
1312
 
1402
- logger.info(f"{'='*60}")
1313
+ logger.info(f"{'=' * 60}")
1403
1314
  logger.info(f"Processing paper")
1404
1315
  if title:
1405
1316
  logger.info(f"Title: {title[:50]}...")
1406
1317
  if doi:
1407
1318
  logger.info(f"DOI: {doi}")
1408
- logger.info(f"{'='*60}")
1319
+ logger.info(f"{'=' * 60}")
1409
1320
 
1410
1321
  # Stage 0: Resolve DOI from title (if needed)
1411
1322
  if not doi and title:
@@ -1452,9 +1363,10 @@ class Scholar:
1452
1363
  logger.info(f"\nStage 2: Checking/finding PDF URLs...")
1453
1364
  if not self._library_manager.has_urls(paper_id):
1454
1365
  logger.info(f"Finding PDF URLs for DOI: {doi}")
1455
- browser, context = (
1456
- await self._browser_manager.get_authenticated_browser_and_context_async()
1457
- )
1366
+ (
1367
+ browser,
1368
+ context,
1369
+ ) = await self._browser_manager.get_authenticated_browser_and_context_async()
1458
1370
  try:
1459
1371
  url_finder = ScholarURLFinder(context, config=self.config)
1460
1372
  urls = await url_finder.find_pdf_urls(doi)
@@ -1474,13 +1386,12 @@ class Scholar:
1474
1386
  if not self._library_manager.has_pdf(paper_id):
1475
1387
  logger.info(f"Downloading PDF...")
1476
1388
  if paper.metadata.url.pdfs:
1477
- browser, context = (
1478
- await self._browser_manager.get_authenticated_browser_and_context_async()
1479
- )
1389
+ (
1390
+ browser,
1391
+ context,
1392
+ ) = await self._browser_manager.get_authenticated_browser_and_context_async()
1480
1393
  try:
1481
- downloader = ScholarPDFDownloader(
1482
- context, config=self.config
1483
- )
1394
+ downloader = ScholarPDFDownloader(context, config=self.config)
1484
1395
 
1485
1396
  pdf_url = (
1486
1397
  paper.metadata.url.pdfs[0]["url"]
@@ -1494,39 +1405,29 @@ class Scholar:
1494
1405
  )
1495
1406
  if result and result.exists():
1496
1407
  paper.metadata.path.pdfs.append(str(result))
1497
- self._library_manager.save_paper_incremental(
1498
- paper_id, paper
1499
- )
1500
- logger.success(
1501
- f"{self.name}: Downloaded PDF, saved to storage"
1502
- )
1408
+ self._library_manager.save_paper_incremental(paper_id, paper)
1409
+ logger.success(f"{self.name}: Downloaded PDF, saved to storage")
1503
1410
  else:
1504
1411
  logger.warning(f"{self.name}: Failed to download PDF")
1505
1412
  finally:
1506
1413
  await self._browser_manager.close()
1507
1414
  else:
1508
- logger.warning(
1509
- f"{self.name}: No PDF URLs available for download"
1510
- )
1415
+ logger.warning(f"{self.name}: No PDF URLs available for download")
1511
1416
  else:
1512
1417
  logger.info(f"{self.name}: PDF already in storage")
1513
1418
 
1514
1419
  # Stage 4: Update project symlinks
1515
1420
  if project and project not in ["master", "MASTER"]:
1516
- logger.info(
1517
- f"{self.name}: \nStage 4: Updating project symlinks..."
1518
- )
1421
+ logger.info(f"{self.name}: \nStage 4: Updating project symlinks...")
1519
1422
  self._library_manager.update_symlink(
1520
1423
  master_storage_path=storage_path,
1521
1424
  project=project,
1522
1425
  )
1523
- logger.success(
1524
- f"{self.name}: Updated symlink in project: {project}"
1525
- )
1426
+ logger.success(f"{self.name}: Updated symlink in project: {project}")
1526
1427
 
1527
- logger.info(f"\n{'='*60}")
1428
+ logger.info(f"\n{'=' * 60}")
1528
1429
  logger.success(f"{self.name}: Paper processing complete")
1529
- logger.info(f"{'='*60}\n")
1430
+ logger.info(f"{'=' * 60}\n")
1530
1431
 
1531
1432
  return paper
1532
1433
 
@@ -1601,12 +1502,12 @@ class Scholar:
1601
1502
  papers = Papers(papers_list, project=project, config=self.config)
1602
1503
 
1603
1504
  total = len(papers)
1604
- logger.info(f"{self.name}: \n{'='*60}")
1505
+ logger.info(f"{self.name}: \n{'=' * 60}")
1605
1506
  logger.info(
1606
1507
  f"{self.name}: Processing {total} papers (max_concurrent={max_concurrent})"
1607
1508
  )
1608
1509
  logger.info(f"{self.name}: Project: {project}")
1609
- logger.info(f"{self.name}: {'='*60}\n")
1510
+ logger.info(f"{self.name}: {'=' * 60}\n")
1610
1511
 
1611
1512
  # Use semaphore for controlled parallelism
1612
1513
  semaphore = asyncio.Semaphore(max_concurrent)
@@ -1614,9 +1515,7 @@ class Scholar:
1614
1515
  async def process_with_semaphore(paper, index):
1615
1516
  """Process one paper with semaphore control."""
1616
1517
  async with semaphore:
1617
- logger.info(
1618
- f"{self.name}: \n[{index}/{total}] Starting paper..."
1619
- )
1518
+ logger.info(f"{self.name}: \n[{index}/{total}] Starting paper...")
1620
1519
  try:
1621
1520
  result = await self.process_paper_async(
1622
1521
  title=paper.metadata.basic.title,
@@ -1630,10 +1529,7 @@ class Scholar:
1630
1529
  return None
1631
1530
 
1632
1531
  # Create tasks for all papers
1633
- tasks = [
1634
- process_with_semaphore(paper, i + 1)
1635
- for i, paper in enumerate(papers)
1636
- ]
1532
+ tasks = [process_with_semaphore(paper, i + 1) for i, paper in enumerate(papers)]
1637
1533
 
1638
1534
  # Process with controlled parallelism
1639
1535
  results = await asyncio.gather(*tasks, return_exceptions=True)
@@ -1643,21 +1539,19 @@ class Scholar:
1643
1539
  errors = 0
1644
1540
  for i, result in enumerate(results):
1645
1541
  if isinstance(result, Exception):
1646
- logger.error(
1647
- f"{self.name}: Paper {i+1} raised exception: {result}"
1648
- )
1542
+ logger.error(f"{self.name}: Paper {i + 1} raised exception: {result}")
1649
1543
  errors += 1
1650
1544
  elif result is not None:
1651
1545
  processed_papers.append(result)
1652
1546
 
1653
1547
  # Summary
1654
- logger.info(f"{self.name}: \n{'='*60}")
1548
+ logger.info(f"{self.name}: \n{'=' * 60}")
1655
1549
  logger.info(f"{self.name}: Batch Processing Complete")
1656
1550
  logger.info(f"{self.name}: Total: {total}")
1657
1551
  logger.info(f"{self.name}: Successful: {len(processed_papers)}")
1658
1552
  logger.info(f"{self.name}: Failed: {total - len(processed_papers)}")
1659
1553
  logger.info(f"{self.name}: Errors: {errors}")
1660
- logger.info(f"{self.name}: {'='*60}\n")
1554
+ logger.info(f"{self.name}: {'=' * 60}\n")
1661
1555
 
1662
1556
  return Papers(processed_papers, project=project, config=self.config)
1663
1557
 
@@ -1697,10 +1591,7 @@ class Scholar:
1697
1591
  @property
1698
1592
  def _scholar_engine(self) -> ScholarEngine:
1699
1593
  """Get Scholar engine for search and enrichment (PRIVATE)."""
1700
- if (
1701
- not hasattr(self, "__scholar_engine")
1702
- or self.__scholar_engine is None
1703
- ):
1594
+ if not hasattr(self, "__scholar_engine") or self.__scholar_engine is None:
1704
1595
  self.__scholar_engine = ScholarEngine(config=self.config)
1705
1596
  return self.__scholar_engine
1706
1597
 
@@ -1714,10 +1605,7 @@ class Scholar:
1714
1605
  @property
1715
1606
  def _browser_manager(self) -> ScholarBrowserManager:
1716
1607
  """Get browser manager service (PRIVATE)."""
1717
- if (
1718
- not hasattr(self, "__browser_manager")
1719
- or self.__browser_manager is None
1720
- ):
1608
+ if not hasattr(self, "__browser_manager") or self.__browser_manager is None:
1721
1609
  self.__browser_manager = ScholarBrowserManager(
1722
1610
  auth_manager=self._auth_manager,
1723
1611
  chrome_profile_name="system",
@@ -1728,10 +1616,7 @@ class Scholar:
1728
1616
  @property
1729
1617
  def _library_manager(self) -> LibraryManager:
1730
1618
  """Get library manager service - low-level operations (PRIVATE)."""
1731
- if (
1732
- not hasattr(self, "__library_manager")
1733
- or self.__library_manager is None
1734
- ):
1619
+ if not hasattr(self, "__library_manager") or self.__library_manager is None:
1735
1620
  self.__library_manager = LibraryManager(
1736
1621
  project=self.project, config=self.config
1737
1622
  )
@@ -1741,9 +1626,7 @@ class Scholar:
1741
1626
  def _library(self) -> ScholarLibrary:
1742
1627
  """Get Scholar library service - high-level operations (PRIVATE)."""
1743
1628
  if not hasattr(self, "__library") or self.__library is None:
1744
- self.__library = ScholarLibrary(
1745
- project=self.project, config=self.config
1746
- )
1629
+ self.__library = ScholarLibrary(project=self.project, config=self.config)
1747
1630
  return self.__library
1748
1631
 
1749
1632
 
@@ -1817,9 +1700,7 @@ if __name__ == "__main__":
1817
1700
 
1818
1701
  # Create some sample papers with Pydantic structure
1819
1702
  p1 = Paper()
1820
- p1.metadata.basic.title = (
1821
- "Vision Transformer: An Image Is Worth 16x16 Words"
1822
- )
1703
+ p1.metadata.basic.title = "Vision Transformer: An Image Is Worth 16x16 Words"
1823
1704
  p1.metadata.basic.authors = ["Dosovitskiy, Alexey", "Beyer, Lucas"]
1824
1705
  p1.metadata.basic.year = 2021
1825
1706
  p1.metadata.basic.keywords = [
@@ -1881,9 +1762,7 @@ if __name__ == "__main__":
1881
1762
  f" 📂 Loaded {len(project_papers)} papers from current project"
1882
1763
  )
1883
1764
  except:
1884
- print(
1885
- f" 📂 Current project is empty or doesn't exist yet"
1886
- )
1765
+ print(f" 📂 Current project is empty or doesn't exist yet")
1887
1766
 
1888
1767
  except Exception as e:
1889
1768
  print(f" ⚠️ Workflow demo partially skipped: {e}")
@@ -1900,9 +1779,7 @@ if __name__ == "__main__":
1900
1779
 
1901
1780
  # Search in current library (existing papers)
1902
1781
  library_search = scholar.search_library("vision")
1903
- print(
1904
- f" 🔍 Library search for 'vision': {len(library_search)} results"
1905
- )
1782
+ print(f" 🔍 Library search for 'vision': {len(library_search)} results")
1906
1783
 
1907
1784
  except Exception as e:
1908
1785
  print(f" ⚠️ Search demo skipped: {e}")
@@ -1911,9 +1788,7 @@ if __name__ == "__main__":
1911
1788
  # Demonstrate configuration access
1912
1789
  print("7. Configuration Management:")
1913
1790
  print(f" ⚙️ Scholar directory: {scholar.config.paths.scholar_dir}")
1914
- print(
1915
- f" ⚙️ Library directory: {scholar.config.get_library_project_dir()}"
1916
- )
1791
+ print(f" ⚙️ Library directory: {scholar.config.get_library_project_dir()}")
1917
1792
  print(
1918
1793
  f" ⚙️ Debug mode: {scholar.config.resolve('debug_mode', default=False)}"
1919
1794
  )
@@ -1921,16 +1796,10 @@ if __name__ == "__main__":
1921
1796
 
1922
1797
  # Demonstrate service access (internal components)
1923
1798
  print("8. Service Components (Internal):")
1924
- print(
1925
- f" 🔧 Scholar Engine: {type(scholar._scholar_engine).__name__}"
1926
- )
1799
+ print(f" 🔧 Scholar Engine: {type(scholar._scholar_engine).__name__}")
1927
1800
  print(f" 🔧 Auth Manager: {type(scholar._auth_manager).__name__}")
1928
- print(
1929
- f" 🔧 Browser Manager: {type(scholar._browser_manager).__name__}"
1930
- )
1931
- print(
1932
- f" 🔧 Library Manager: {type(scholar._library_manager).__name__}"
1933
- )
1801
+ print(f" 🔧 Browser Manager: {type(scholar._browser_manager).__name__}")
1802
+ print(f" 🔧 Library Manager: {type(scholar._library_manager).__name__}")
1934
1803
  print()
1935
1804
 
1936
1805
  # Demonstrate backup capabilities