multipers 2.2.3__cp310-cp310-win_amd64.whl → 2.3.1__cp310-cp310-win_amd64.whl

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Files changed (182) hide show
  1. multipers/__init__.py +33 -31
  2. multipers/_signed_measure_meta.py +430 -430
  3. multipers/_slicer_meta.py +211 -212
  4. multipers/data/MOL2.py +458 -458
  5. multipers/data/UCR.py +18 -18
  6. multipers/data/graphs.py +466 -466
  7. multipers/data/immuno_regions.py +27 -27
  8. multipers/data/pytorch2simplextree.py +90 -90
  9. multipers/data/shape3d.py +101 -101
  10. multipers/data/synthetic.py +113 -111
  11. multipers/distances.py +198 -198
  12. multipers/filtration_conversions.pxd.tp +84 -84
  13. multipers/filtrations/__init__.py +18 -0
  14. multipers/{ml/convolutions.py → filtrations/density.py} +563 -520
  15. multipers/filtrations/filtrations.py +289 -0
  16. multipers/filtrations.pxd +224 -224
  17. multipers/function_rips.cp310-win_amd64.pyd +0 -0
  18. multipers/function_rips.pyx +105 -105
  19. multipers/grids.cp310-win_amd64.pyd +0 -0
  20. multipers/grids.pyx +350 -350
  21. multipers/gudhi/Persistence_slices_interface.h +132 -132
  22. multipers/gudhi/Simplex_tree_interface.h +239 -245
  23. multipers/gudhi/Simplex_tree_multi_interface.h +516 -561
  24. multipers/gudhi/cubical_to_boundary.h +59 -59
  25. multipers/gudhi/gudhi/Bitmap_cubical_complex.h +450 -450
  26. multipers/gudhi/gudhi/Bitmap_cubical_complex_base.h +1070 -1070
  27. multipers/gudhi/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h +579 -579
  28. multipers/gudhi/gudhi/Debug_utils.h +45 -45
  29. multipers/gudhi/gudhi/Fields/Multi_field.h +484 -484
  30. multipers/gudhi/gudhi/Fields/Multi_field_operators.h +455 -455
  31. multipers/gudhi/gudhi/Fields/Multi_field_shared.h +450 -450
  32. multipers/gudhi/gudhi/Fields/Multi_field_small.h +531 -531
  33. multipers/gudhi/gudhi/Fields/Multi_field_small_operators.h +507 -507
  34. multipers/gudhi/gudhi/Fields/Multi_field_small_shared.h +531 -531
  35. multipers/gudhi/gudhi/Fields/Z2_field.h +355 -355
  36. multipers/gudhi/gudhi/Fields/Z2_field_operators.h +376 -376
  37. multipers/gudhi/gudhi/Fields/Zp_field.h +420 -420
  38. multipers/gudhi/gudhi/Fields/Zp_field_operators.h +400 -400
  39. multipers/gudhi/gudhi/Fields/Zp_field_shared.h +418 -418
  40. multipers/gudhi/gudhi/Flag_complex_edge_collapser.h +337 -337
  41. multipers/gudhi/gudhi/Matrix.h +2107 -2107
  42. multipers/gudhi/gudhi/Multi_critical_filtration.h +1038 -1038
  43. multipers/gudhi/gudhi/Multi_persistence/Box.h +171 -171
  44. multipers/gudhi/gudhi/Multi_persistence/Line.h +282 -282
  45. multipers/gudhi/gudhi/Off_reader.h +173 -173
  46. multipers/gudhi/gudhi/One_critical_filtration.h +1433 -1431
  47. multipers/gudhi/gudhi/Persistence_matrix/Base_matrix.h +769 -769
  48. multipers/gudhi/gudhi/Persistence_matrix/Base_matrix_with_column_compression.h +686 -686
  49. multipers/gudhi/gudhi/Persistence_matrix/Boundary_matrix.h +842 -842
  50. multipers/gudhi/gudhi/Persistence_matrix/Chain_matrix.h +1350 -1350
  51. multipers/gudhi/gudhi/Persistence_matrix/Id_to_index_overlay.h +1105 -1105
  52. multipers/gudhi/gudhi/Persistence_matrix/Position_to_index_overlay.h +859 -859
  53. multipers/gudhi/gudhi/Persistence_matrix/RU_matrix.h +910 -910
  54. multipers/gudhi/gudhi/Persistence_matrix/allocators/entry_constructors.h +139 -139
  55. multipers/gudhi/gudhi/Persistence_matrix/base_pairing.h +230 -230
  56. multipers/gudhi/gudhi/Persistence_matrix/base_swap.h +211 -211
  57. multipers/gudhi/gudhi/Persistence_matrix/boundary_cell_position_to_id_mapper.h +60 -60
  58. multipers/gudhi/gudhi/Persistence_matrix/boundary_face_position_to_id_mapper.h +60 -60
  59. multipers/gudhi/gudhi/Persistence_matrix/chain_pairing.h +136 -136
  60. multipers/gudhi/gudhi/Persistence_matrix/chain_rep_cycles.h +190 -190
  61. multipers/gudhi/gudhi/Persistence_matrix/chain_vine_swap.h +616 -616
  62. multipers/gudhi/gudhi/Persistence_matrix/columns/chain_column_extra_properties.h +150 -150
  63. multipers/gudhi/gudhi/Persistence_matrix/columns/column_dimension_holder.h +106 -106
  64. multipers/gudhi/gudhi/Persistence_matrix/columns/column_utilities.h +219 -219
  65. multipers/gudhi/gudhi/Persistence_matrix/columns/entry_types.h +327 -327
  66. multipers/gudhi/gudhi/Persistence_matrix/columns/heap_column.h +1140 -1140
  67. multipers/gudhi/gudhi/Persistence_matrix/columns/intrusive_list_column.h +934 -934
  68. multipers/gudhi/gudhi/Persistence_matrix/columns/intrusive_set_column.h +934 -934
  69. multipers/gudhi/gudhi/Persistence_matrix/columns/list_column.h +980 -980
  70. multipers/gudhi/gudhi/Persistence_matrix/columns/naive_vector_column.h +1092 -1092
  71. multipers/gudhi/gudhi/Persistence_matrix/columns/row_access.h +192 -192
  72. multipers/gudhi/gudhi/Persistence_matrix/columns/set_column.h +921 -921
  73. multipers/gudhi/gudhi/Persistence_matrix/columns/small_vector_column.h +1093 -1093
  74. multipers/gudhi/gudhi/Persistence_matrix/columns/unordered_set_column.h +1012 -1012
  75. multipers/gudhi/gudhi/Persistence_matrix/columns/vector_column.h +1244 -1244
  76. multipers/gudhi/gudhi/Persistence_matrix/matrix_dimension_holders.h +186 -186
  77. multipers/gudhi/gudhi/Persistence_matrix/matrix_row_access.h +164 -164
  78. multipers/gudhi/gudhi/Persistence_matrix/ru_pairing.h +156 -156
  79. multipers/gudhi/gudhi/Persistence_matrix/ru_rep_cycles.h +376 -376
  80. multipers/gudhi/gudhi/Persistence_matrix/ru_vine_swap.h +540 -540
  81. multipers/gudhi/gudhi/Persistent_cohomology/Field_Zp.h +118 -118
  82. multipers/gudhi/gudhi/Persistent_cohomology/Multi_field.h +173 -173
  83. multipers/gudhi/gudhi/Persistent_cohomology/Persistent_cohomology_column.h +128 -128
  84. multipers/gudhi/gudhi/Persistent_cohomology.h +745 -745
  85. multipers/gudhi/gudhi/Points_off_io.h +171 -171
  86. multipers/gudhi/gudhi/Simple_object_pool.h +69 -69
  87. multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_iterators.h +463 -463
  88. multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h +83 -83
  89. multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_siblings.h +106 -106
  90. multipers/gudhi/gudhi/Simplex_tree/Simplex_tree_star_simplex_iterators.h +277 -277
  91. multipers/gudhi/gudhi/Simplex_tree/hooks_simplex_base.h +62 -62
  92. multipers/gudhi/gudhi/Simplex_tree/indexing_tag.h +27 -27
  93. multipers/gudhi/gudhi/Simplex_tree/serialization_utils.h +62 -62
  94. multipers/gudhi/gudhi/Simplex_tree/simplex_tree_options.h +157 -157
  95. multipers/gudhi/gudhi/Simplex_tree.h +2794 -2794
  96. multipers/gudhi/gudhi/Simplex_tree_multi.h +152 -163
  97. multipers/gudhi/gudhi/distance_functions.h +62 -62
  98. multipers/gudhi/gudhi/graph_simplicial_complex.h +104 -104
  99. multipers/gudhi/gudhi/persistence_interval.h +253 -253
  100. multipers/gudhi/gudhi/persistence_matrix_options.h +170 -170
  101. multipers/gudhi/gudhi/reader_utils.h +367 -367
  102. multipers/gudhi/mma_interface_coh.h +256 -255
  103. multipers/gudhi/mma_interface_h0.h +223 -231
  104. multipers/gudhi/mma_interface_matrix.h +291 -282
  105. multipers/gudhi/naive_merge_tree.h +536 -575
  106. multipers/gudhi/scc_io.h +310 -289
  107. multipers/gudhi/truc.h +957 -888
  108. multipers/io.cp310-win_amd64.pyd +0 -0
  109. multipers/io.pyx +714 -711
  110. multipers/ml/accuracies.py +90 -90
  111. multipers/ml/invariants_with_persistable.py +79 -79
  112. multipers/ml/kernels.py +176 -176
  113. multipers/ml/mma.py +713 -714
  114. multipers/ml/one.py +472 -472
  115. multipers/ml/point_clouds.py +352 -346
  116. multipers/ml/signed_measures.py +1589 -1589
  117. multipers/ml/sliced_wasserstein.py +461 -461
  118. multipers/ml/tools.py +113 -113
  119. multipers/mma_structures.cp310-win_amd64.pyd +0 -0
  120. multipers/mma_structures.pxd +127 -127
  121. multipers/mma_structures.pyx +4 -8
  122. multipers/mma_structures.pyx.tp +1083 -1085
  123. multipers/multi_parameter_rank_invariant/diff_helpers.h +84 -93
  124. multipers/multi_parameter_rank_invariant/euler_characteristic.h +97 -97
  125. multipers/multi_parameter_rank_invariant/function_rips.h +322 -322
  126. multipers/multi_parameter_rank_invariant/hilbert_function.h +769 -769
  127. multipers/multi_parameter_rank_invariant/persistence_slices.h +148 -148
  128. multipers/multi_parameter_rank_invariant/rank_invariant.h +369 -369
  129. multipers/multiparameter_edge_collapse.py +41 -41
  130. multipers/multiparameter_module_approximation/approximation.h +2298 -2295
  131. multipers/multiparameter_module_approximation/combinatory.h +129 -129
  132. multipers/multiparameter_module_approximation/debug.h +107 -107
  133. multipers/multiparameter_module_approximation/format_python-cpp.h +286 -286
  134. multipers/multiparameter_module_approximation/heap_column.h +238 -238
  135. multipers/multiparameter_module_approximation/images.h +79 -79
  136. multipers/multiparameter_module_approximation/list_column.h +174 -174
  137. multipers/multiparameter_module_approximation/list_column_2.h +232 -232
  138. multipers/multiparameter_module_approximation/ru_matrix.h +347 -347
  139. multipers/multiparameter_module_approximation/set_column.h +135 -135
  140. multipers/multiparameter_module_approximation/structure_higher_dim_barcode.h +36 -36
  141. multipers/multiparameter_module_approximation/unordered_set_column.h +166 -166
  142. multipers/multiparameter_module_approximation/utilities.h +403 -419
  143. multipers/multiparameter_module_approximation/vector_column.h +223 -223
  144. multipers/multiparameter_module_approximation/vector_matrix.h +331 -331
  145. multipers/multiparameter_module_approximation/vineyards.h +464 -464
  146. multipers/multiparameter_module_approximation/vineyards_trajectories.h +649 -649
  147. multipers/multiparameter_module_approximation.cp310-win_amd64.pyd +0 -0
  148. multipers/multiparameter_module_approximation.pyx +218 -217
  149. multipers/pickle.py +90 -53
  150. multipers/plots.py +342 -334
  151. multipers/point_measure.cp310-win_amd64.pyd +0 -0
  152. multipers/point_measure.pyx +322 -320
  153. multipers/simplex_tree_multi.cp310-win_amd64.pyd +0 -0
  154. multipers/simplex_tree_multi.pxd +133 -133
  155. multipers/simplex_tree_multi.pyx +115 -48
  156. multipers/simplex_tree_multi.pyx.tp +1947 -1935
  157. multipers/slicer.cp310-win_amd64.pyd +0 -0
  158. multipers/slicer.pxd +301 -120
  159. multipers/slicer.pxd.tp +218 -214
  160. multipers/slicer.pyx +1570 -507
  161. multipers/slicer.pyx.tp +931 -914
  162. multipers/tensor/tensor.h +672 -672
  163. multipers/tensor.pxd +13 -13
  164. multipers/test.pyx +44 -44
  165. multipers/tests/__init__.py +57 -57
  166. multipers/torch/diff_grids.py +217 -217
  167. multipers/torch/rips_density.py +310 -304
  168. {multipers-2.2.3.dist-info → multipers-2.3.1.dist-info}/LICENSE +21 -21
  169. {multipers-2.2.3.dist-info → multipers-2.3.1.dist-info}/METADATA +21 -11
  170. multipers-2.3.1.dist-info/RECORD +182 -0
  171. {multipers-2.2.3.dist-info → multipers-2.3.1.dist-info}/WHEEL +1 -1
  172. multipers/tests/test_diff_helper.py +0 -73
  173. multipers/tests/test_hilbert_function.py +0 -82
  174. multipers/tests/test_mma.py +0 -83
  175. multipers/tests/test_point_clouds.py +0 -49
  176. multipers/tests/test_python-cpp_conversion.py +0 -82
  177. multipers/tests/test_signed_betti.py +0 -181
  178. multipers/tests/test_signed_measure.py +0 -89
  179. multipers/tests/test_simplextreemulti.py +0 -221
  180. multipers/tests/test_slicer.py +0 -221
  181. multipers-2.2.3.dist-info/RECORD +0 -189
  182. {multipers-2.2.3.dist-info → multipers-2.3.1.dist-info}/top_level.txt +0 -0
@@ -1,355 +1,355 @@
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- /* This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT.
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- * See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details.
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- * Author(s): Hannah Schreiber
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- *
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- * Copyright (C) 2022-24 Inria
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- *
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- * Modification(s):
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- * - YYYY/MM Author: Description of the modification
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- */
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-
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- /**
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- * @file Z2_field.h
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- * @author Hannah Schreiber
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- * @brief Contains the @ref Gudhi::persistence_fields::Z2_field_element class.
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- */
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-
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- #ifndef MATRIX_FIELD_Z2_H_
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- #define MATRIX_FIELD_Z2_H_
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-
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- #include <utility>
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-
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- namespace Gudhi {
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- namespace persistence_fields {
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-
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- /**
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- * @class Z2_field_element Z2_field.h gudhi/Fields/Z2_field.h
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- * @ingroup persistence_fields
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- *
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- * @brief Class representing an element of the \f$ \mathbb{F}_2 \f$ field.
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- */
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- class Z2_field_element
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- {
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- public:
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- using Element = bool; /**< Type for the elements in the field. */
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- template <class T>
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- using isInteger = std::enable_if_t<std::is_integral_v<T> >;
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-
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- /**
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- * @brief Default constructor.
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- */
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- Z2_field_element();
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- /**
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- * @brief Constructor setting the element to the given value.
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- *
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- * @tparam Integer_type A native integer type. Should be able to contain the characteristic.
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- * @param element Value of the element.
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- */
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- template <typename Integer_type, class = isInteger<Integer_type> >
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- Z2_field_element(Integer_type element);
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- /**
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- * @brief Copy constructor.
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- *
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- * @param toCopy Element to copy.
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- */
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- Z2_field_element(const Z2_field_element& toCopy);
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- /**
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- * @brief Move constructor.
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- *
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- * @param toMove Element to move.
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- */
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- Z2_field_element(Z2_field_element&& toMove) noexcept;
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-
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- /**
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- * @brief operator+=
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- */
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- friend void operator+=(Z2_field_element& f1, Z2_field_element const& f2) {
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- f1.element_ = (f1.element_ != f2.element_);
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- }
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- /**
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- * @brief operator+
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- */
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- friend Z2_field_element operator+(Z2_field_element f1, Z2_field_element const& f2) {
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- f1 += f2;
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- return f1;
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- }
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- /**
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- * @brief operator+=
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- *
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- * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
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- */
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- template <typename Integer_type, class = isInteger<Integer_type> >
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- friend void operator+=(Z2_field_element& f, const Integer_type& v) { f.element_ = (f.element_ != _get_value(v)); }
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- /**
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- * @brief operator+
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- *
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- * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
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- */
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- template <typename Integer_type, class = isInteger<Integer_type> >
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- friend Z2_field_element operator+(Z2_field_element f, const Integer_type& v) {
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- f += v;
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- return f;
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- }
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- /**
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- * @brief operator+
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- *
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- * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
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- */
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- template <typename Integer_type, class = isInteger<Integer_type> >
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- friend Integer_type operator+(const Integer_type& v, const Z2_field_element& f) {
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- return f.element_ != _get_value(v);
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- }
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-
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- /**
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- * @brief operator-=
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- */
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- friend void operator-=(Z2_field_element& f1, Z2_field_element const& f2) {
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- f1.element_ = (f1.element_ != f2.element_);
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- }
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- /**
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- * @brief operator-
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- */
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- friend Z2_field_element operator-(Z2_field_element f1, Z2_field_element const& f2) {
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- f1 -= f2;
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- return f1;
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- }
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- /**
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- * @brief operator-=
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- *
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- * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
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- */
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- template <typename Integer_type, class = isInteger<Integer_type> >
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- friend void operator-=(Z2_field_element& f, const Integer_type& v) { f.element_ = (f.element_ != _get_value(v)); }
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- /**
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- * @brief operator-
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- *
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- * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
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- */
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- template <typename Integer_type, class = isInteger<Integer_type> >
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- friend Z2_field_element operator-(Z2_field_element f, const Integer_type& v) {
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- f -= v;
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- return f;
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- }
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- /**
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- * @brief operator-
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- *
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- * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
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- */
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- template <typename Integer_type, class = isInteger<Integer_type> >
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- friend Integer_type operator-(const Integer_type v, Z2_field_element const& f) {
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- return f.element_ != _get_value(v);
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- }
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-
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- /**
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- * @brief operator*=
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- */
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- friend void operator*=(Z2_field_element& f1, Z2_field_element const& f2) {
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- f1.element_ = (f1.element_ && f2.element_);
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- }
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- /**
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- * @brief operator*
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- */
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- friend Z2_field_element operator*(Z2_field_element f1, Z2_field_element const& f2) {
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- f1 *= f2;
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- return f1;
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- }
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- /**
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- * @brief operator*=
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- *
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- * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
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- */
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- template <typename Integer_type, class = isInteger<Integer_type> >
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- friend void operator*=(Z2_field_element& f, const Integer_type& v) { f.element_ = (f.element_ && _get_value(v)); }
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- /**
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- * @brief operator*
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- *
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- * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
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- */
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- template <typename Integer_type, class = isInteger<Integer_type> >
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- friend Z2_field_element operator*(Z2_field_element f, const Integer_type& v) {
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- f *= v;
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- return f;
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- }
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- /**
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- * @brief operator*
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- *
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- * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
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- */
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- template <typename Integer_type, class = isInteger<Integer_type> >
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- friend Integer_type operator*(const Integer_type& v, Z2_field_element const& f) {
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- return f.element_ && _get_value(v);
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- }
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-
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- /**
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- * @brief operator==
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- */
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- friend bool operator==(const Z2_field_element& f1, const Z2_field_element& f2) { return f1.element_ == f2.element_; }
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- /**
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- * @brief operator==
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- *
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- * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
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- */
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- template <typename Integer_type, class = isInteger<Integer_type> >
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- friend bool operator==(const Integer_type& v, const Z2_field_element& f) {
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- return _get_value(v) == f.element_;
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- }
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- /**
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- * @brief operator==
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- *
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- * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
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- */
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- template <typename Integer_type, class = isInteger<Integer_type> >
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- friend bool operator==(const Z2_field_element& f, const Integer_type& v) {
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- return _get_value(v) == f.element_;
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- }
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- /**
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- * @brief operator!=
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- */
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- friend bool operator!=(const Z2_field_element& f1, const Z2_field_element& f2) { return !(f1 == f2); }
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- /**
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- * @brief operator!=
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- *
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- * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
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- */
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- template <typename Integer_type, class = isInteger<Integer_type> >
215
- friend bool operator!=(const Integer_type v, const Z2_field_element& f) {
216
- return !(v == f);
217
- }
218
- /**
219
- * @brief operator!=
220
- *
221
- * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
222
- */
223
- template <typename Integer_type, class = isInteger<Integer_type> >
224
- friend bool operator!=(const Z2_field_element& f, const Integer_type v) {
225
- return !(v == f);
226
- }
227
-
228
- /**
229
- * @brief Assign operator.
230
- */
231
- Z2_field_element& operator=(Z2_field_element other);
232
- /**
233
- * @brief Assign operator.
234
- */
235
- Z2_field_element& operator=(const unsigned int value);
236
- /**
237
- * @brief Swap operator.
238
- */
239
- friend void swap(Z2_field_element& f1, Z2_field_element& f2) { std::swap(f1.element_, f2.element_); }
240
-
241
- /**
242
- * @brief Casts the element into an unsigned int.
243
- */
244
- operator unsigned int() const;
245
-
246
- /**
247
- * @brief Returns the inverse of the element.
248
- *
249
- * @return The inverse.
250
- */
251
- Z2_field_element get_inverse() const;
252
- /**
253
- * @brief For interface purposes with multi-fields. Returns the inverse together with the second argument.
254
- *
255
- * @param productOfCharacteristics Some value.
256
- * @return Pair whose first element is the inverse of @p e and the second element is @p productOfCharacteristics.
257
- */
258
- std::pair<Z2_field_element, unsigned int> get_partial_inverse(unsigned int productOfCharacteristics) const;
259
-
260
- /**
261
- * @brief Returns the additive identity of the field.
262
- *
263
- * @return false.
264
- */
265
- static Z2_field_element get_additive_identity();
266
- /**
267
- * @brief Returns the multiplicative identity of the field.
268
- *
269
- * @return true.
270
- */
271
- static Z2_field_element get_multiplicative_identity();
272
- /**
273
- * @brief For interface purposes with multi-fields. Returns the multiplicative identity of the field.
274
- *
275
- * @param productOfCharacteristics Some value.
276
- * @return true.
277
- */
278
- static Z2_field_element get_partial_multiplicative_identity([[maybe_unused]] unsigned int productOfCharacteristics);
279
- /**
280
- * @brief Returns the characteristic of the field, that is `2`.
281
- *
282
- * @return 2.
283
- */
284
- static constexpr unsigned int get_characteristic();
285
-
286
- /**
287
- * @brief Returns the value of the element.
288
- *
289
- * @return Value of the element.
290
- */
291
- Element get_value() const;
292
-
293
- // static constexpr bool handles_only_z2() { return true; }
294
-
295
- private:
296
- Element element_;
297
-
298
- template <typename Integer_type, class = isInteger<Integer_type> >
299
- static constexpr Element _get_value(Integer_type e) {
300
- if constexpr (std::is_same_v<Integer_type, bool>) {
301
- return e;
302
- } else {
303
- return e < 2 && e >= 0 ? e : e % 2; // returns bool, so %2 won't be negative and is optimized to &
304
- }
305
- }
306
- };
307
-
308
- inline Z2_field_element::Z2_field_element() : element_(false) {}
309
-
310
- template <typename Integer_type, class>
311
- inline Z2_field_element::Z2_field_element(Integer_type element) : element_(_get_value(element)) {}
312
-
313
- inline Z2_field_element::Z2_field_element(const Z2_field_element& toCopy) : element_(toCopy.element_) {}
314
-
315
- inline Z2_field_element::Z2_field_element(Z2_field_element&& toMove) noexcept
316
- : element_(std::exchange(toMove.element_, 0)) {}
317
-
318
- inline Z2_field_element& Z2_field_element::operator=(Z2_field_element other) {
319
- std::swap(element_, other.element_);
320
- return *this;
321
- }
322
-
323
- inline Z2_field_element& Z2_field_element::operator=(unsigned int const value) {
324
- element_ = _get_value(value);
325
- return *this;
326
- }
327
-
328
- inline Z2_field_element::operator unsigned int() const { return element_; }
329
-
330
- inline Z2_field_element Z2_field_element::get_inverse() const {
331
- return element_ ? Z2_field_element(1) : Z2_field_element();
332
- }
333
-
334
- inline std::pair<Z2_field_element, unsigned int> Z2_field_element::get_partial_inverse(
335
- unsigned int productOfCharacteristics) const {
336
- return {get_inverse(), productOfCharacteristics};
337
- }
338
-
339
- inline Z2_field_element Z2_field_element::get_additive_identity() { return Z2_field_element(); }
340
-
341
- inline Z2_field_element Z2_field_element::get_multiplicative_identity() { return Z2_field_element(1); }
342
-
343
- inline Z2_field_element Z2_field_element::get_partial_multiplicative_identity(
344
- [[maybe_unused]] unsigned int productOfCharacteristics) {
345
- return Z2_field_element(1);
346
- }
347
-
348
- inline constexpr unsigned int Z2_field_element::get_characteristic() { return 2; }
349
-
350
- inline Z2_field_element::Element Z2_field_element::get_value() const { return element_; }
351
-
352
- } // namespace persistence_fields
353
- } // namespace Gudhi
354
-
355
- #endif // MATRIX_FIELD_Z2_H_
1
+ /* This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT.
2
+ * See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details.
3
+ * Author(s): Hannah Schreiber
4
+ *
5
+ * Copyright (C) 2022-24 Inria
6
+ *
7
+ * Modification(s):
8
+ * - YYYY/MM Author: Description of the modification
9
+ */
10
+
11
+ /**
12
+ * @file Z2_field.h
13
+ * @author Hannah Schreiber
14
+ * @brief Contains the @ref Gudhi::persistence_fields::Z2_field_element class.
15
+ */
16
+
17
+ #ifndef MATRIX_FIELD_Z2_H_
18
+ #define MATRIX_FIELD_Z2_H_
19
+
20
+ #include <utility>
21
+
22
+ namespace Gudhi {
23
+ namespace persistence_fields {
24
+
25
+ /**
26
+ * @class Z2_field_element Z2_field.h gudhi/Fields/Z2_field.h
27
+ * @ingroup persistence_fields
28
+ *
29
+ * @brief Class representing an element of the \f$ \mathbb{F}_2 \f$ field.
30
+ */
31
+ class Z2_field_element
32
+ {
33
+ public:
34
+ using Element = bool; /**< Type for the elements in the field. */
35
+ template <class T>
36
+ using isInteger = std::enable_if_t<std::is_integral_v<T> >;
37
+
38
+ /**
39
+ * @brief Default constructor.
40
+ */
41
+ Z2_field_element();
42
+ /**
43
+ * @brief Constructor setting the element to the given value.
44
+ *
45
+ * @tparam Integer_type A native integer type. Should be able to contain the characteristic.
46
+ * @param element Value of the element.
47
+ */
48
+ template <typename Integer_type, class = isInteger<Integer_type> >
49
+ Z2_field_element(Integer_type element);
50
+ /**
51
+ * @brief Copy constructor.
52
+ *
53
+ * @param toCopy Element to copy.
54
+ */
55
+ Z2_field_element(const Z2_field_element& toCopy);
56
+ /**
57
+ * @brief Move constructor.
58
+ *
59
+ * @param toMove Element to move.
60
+ */
61
+ Z2_field_element(Z2_field_element&& toMove) noexcept;
62
+
63
+ /**
64
+ * @brief operator+=
65
+ */
66
+ friend void operator+=(Z2_field_element& f1, Z2_field_element const& f2) {
67
+ f1.element_ = (f1.element_ != f2.element_);
68
+ }
69
+ /**
70
+ * @brief operator+
71
+ */
72
+ friend Z2_field_element operator+(Z2_field_element f1, Z2_field_element const& f2) {
73
+ f1 += f2;
74
+ return f1;
75
+ }
76
+ /**
77
+ * @brief operator+=
78
+ *
79
+ * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
80
+ */
81
+ template <typename Integer_type, class = isInteger<Integer_type> >
82
+ friend void operator+=(Z2_field_element& f, const Integer_type& v) { f.element_ = (f.element_ != _get_value(v)); }
83
+ /**
84
+ * @brief operator+
85
+ *
86
+ * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
87
+ */
88
+ template <typename Integer_type, class = isInteger<Integer_type> >
89
+ friend Z2_field_element operator+(Z2_field_element f, const Integer_type& v) {
90
+ f += v;
91
+ return f;
92
+ }
93
+ /**
94
+ * @brief operator+
95
+ *
96
+ * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
97
+ */
98
+ template <typename Integer_type, class = isInteger<Integer_type> >
99
+ friend Integer_type operator+(const Integer_type& v, const Z2_field_element& f) {
100
+ return f.element_ != _get_value(v);
101
+ }
102
+
103
+ /**
104
+ * @brief operator-=
105
+ */
106
+ friend void operator-=(Z2_field_element& f1, Z2_field_element const& f2) {
107
+ f1.element_ = (f1.element_ != f2.element_);
108
+ }
109
+ /**
110
+ * @brief operator-
111
+ */
112
+ friend Z2_field_element operator-(Z2_field_element f1, Z2_field_element const& f2) {
113
+ f1 -= f2;
114
+ return f1;
115
+ }
116
+ /**
117
+ * @brief operator-=
118
+ *
119
+ * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
120
+ */
121
+ template <typename Integer_type, class = isInteger<Integer_type> >
122
+ friend void operator-=(Z2_field_element& f, const Integer_type& v) { f.element_ = (f.element_ != _get_value(v)); }
123
+ /**
124
+ * @brief operator-
125
+ *
126
+ * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
127
+ */
128
+ template <typename Integer_type, class = isInteger<Integer_type> >
129
+ friend Z2_field_element operator-(Z2_field_element f, const Integer_type& v) {
130
+ f -= v;
131
+ return f;
132
+ }
133
+ /**
134
+ * @brief operator-
135
+ *
136
+ * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
137
+ */
138
+ template <typename Integer_type, class = isInteger<Integer_type> >
139
+ friend Integer_type operator-(const Integer_type v, Z2_field_element const& f) {
140
+ return f.element_ != _get_value(v);
141
+ }
142
+
143
+ /**
144
+ * @brief operator*=
145
+ */
146
+ friend void operator*=(Z2_field_element& f1, Z2_field_element const& f2) {
147
+ f1.element_ = (f1.element_ && f2.element_);
148
+ }
149
+ /**
150
+ * @brief operator*
151
+ */
152
+ friend Z2_field_element operator*(Z2_field_element f1, Z2_field_element const& f2) {
153
+ f1 *= f2;
154
+ return f1;
155
+ }
156
+ /**
157
+ * @brief operator*=
158
+ *
159
+ * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
160
+ */
161
+ template <typename Integer_type, class = isInteger<Integer_type> >
162
+ friend void operator*=(Z2_field_element& f, const Integer_type& v) { f.element_ = (f.element_ && _get_value(v)); }
163
+ /**
164
+ * @brief operator*
165
+ *
166
+ * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
167
+ */
168
+ template <typename Integer_type, class = isInteger<Integer_type> >
169
+ friend Z2_field_element operator*(Z2_field_element f, const Integer_type& v) {
170
+ f *= v;
171
+ return f;
172
+ }
173
+ /**
174
+ * @brief operator*
175
+ *
176
+ * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
177
+ */
178
+ template <typename Integer_type, class = isInteger<Integer_type> >
179
+ friend Integer_type operator*(const Integer_type& v, Z2_field_element const& f) {
180
+ return f.element_ && _get_value(v);
181
+ }
182
+
183
+ /**
184
+ * @brief operator==
185
+ */
186
+ friend bool operator==(const Z2_field_element& f1, const Z2_field_element& f2) { return f1.element_ == f2.element_; }
187
+ /**
188
+ * @brief operator==
189
+ *
190
+ * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
191
+ */
192
+ template <typename Integer_type, class = isInteger<Integer_type> >
193
+ friend bool operator==(const Integer_type& v, const Z2_field_element& f) {
194
+ return _get_value(v) == f.element_;
195
+ }
196
+ /**
197
+ * @brief operator==
198
+ *
199
+ * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
200
+ */
201
+ template <typename Integer_type, class = isInteger<Integer_type> >
202
+ friend bool operator==(const Z2_field_element& f, const Integer_type& v) {
203
+ return _get_value(v) == f.element_;
204
+ }
205
+ /**
206
+ * @brief operator!=
207
+ */
208
+ friend bool operator!=(const Z2_field_element& f1, const Z2_field_element& f2) { return !(f1 == f2); }
209
+ /**
210
+ * @brief operator!=
211
+ *
212
+ * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
213
+ */
214
+ template <typename Integer_type, class = isInteger<Integer_type> >
215
+ friend bool operator!=(const Integer_type v, const Z2_field_element& f) {
216
+ return !(v == f);
217
+ }
218
+ /**
219
+ * @brief operator!=
220
+ *
221
+ * @tparam Integer_type A native integer type: int, unsigned int, long int, bool, etc.
222
+ */
223
+ template <typename Integer_type, class = isInteger<Integer_type> >
224
+ friend bool operator!=(const Z2_field_element& f, const Integer_type v) {
225
+ return !(v == f);
226
+ }
227
+
228
+ /**
229
+ * @brief Assign operator.
230
+ */
231
+ Z2_field_element& operator=(Z2_field_element other);
232
+ /**
233
+ * @brief Assign operator.
234
+ */
235
+ Z2_field_element& operator=(const unsigned int value);
236
+ /**
237
+ * @brief Swap operator.
238
+ */
239
+ friend void swap(Z2_field_element& f1, Z2_field_element& f2) { std::swap(f1.element_, f2.element_); }
240
+
241
+ /**
242
+ * @brief Casts the element into an unsigned int.
243
+ */
244
+ operator unsigned int() const;
245
+
246
+ /**
247
+ * @brief Returns the inverse of the element.
248
+ *
249
+ * @return The inverse.
250
+ */
251
+ Z2_field_element get_inverse() const;
252
+ /**
253
+ * @brief For interface purposes with multi-fields. Returns the inverse together with the second argument.
254
+ *
255
+ * @param productOfCharacteristics Some value.
256
+ * @return Pair whose first element is the inverse of @p e and the second element is @p productOfCharacteristics.
257
+ */
258
+ std::pair<Z2_field_element, unsigned int> get_partial_inverse(unsigned int productOfCharacteristics) const;
259
+
260
+ /**
261
+ * @brief Returns the additive identity of the field.
262
+ *
263
+ * @return false.
264
+ */
265
+ static Z2_field_element get_additive_identity();
266
+ /**
267
+ * @brief Returns the multiplicative identity of the field.
268
+ *
269
+ * @return true.
270
+ */
271
+ static Z2_field_element get_multiplicative_identity();
272
+ /**
273
+ * @brief For interface purposes with multi-fields. Returns the multiplicative identity of the field.
274
+ *
275
+ * @param productOfCharacteristics Some value.
276
+ * @return true.
277
+ */
278
+ static Z2_field_element get_partial_multiplicative_identity([[maybe_unused]] unsigned int productOfCharacteristics);
279
+ /**
280
+ * @brief Returns the characteristic of the field, that is `2`.
281
+ *
282
+ * @return 2.
283
+ */
284
+ static constexpr unsigned int get_characteristic();
285
+
286
+ /**
287
+ * @brief Returns the value of the element.
288
+ *
289
+ * @return Value of the element.
290
+ */
291
+ Element get_value() const;
292
+
293
+ // static constexpr bool handles_only_z2() { return true; }
294
+
295
+ private:
296
+ Element element_;
297
+
298
+ template <typename Integer_type, class = isInteger<Integer_type> >
299
+ static constexpr Element _get_value(Integer_type e) {
300
+ if constexpr (std::is_same_v<Integer_type, bool>) {
301
+ return e;
302
+ } else {
303
+ return e < 2 && e >= 0 ? e : e % 2; // returns bool, so %2 won't be negative and is optimized to &
304
+ }
305
+ }
306
+ };
307
+
308
+ inline Z2_field_element::Z2_field_element() : element_(false) {}
309
+
310
+ template <typename Integer_type, class>
311
+ inline Z2_field_element::Z2_field_element(Integer_type element) : element_(_get_value(element)) {}
312
+
313
+ inline Z2_field_element::Z2_field_element(const Z2_field_element& toCopy) : element_(toCopy.element_) {}
314
+
315
+ inline Z2_field_element::Z2_field_element(Z2_field_element&& toMove) noexcept
316
+ : element_(std::exchange(toMove.element_, 0)) {}
317
+
318
+ inline Z2_field_element& Z2_field_element::operator=(Z2_field_element other) {
319
+ std::swap(element_, other.element_);
320
+ return *this;
321
+ }
322
+
323
+ inline Z2_field_element& Z2_field_element::operator=(unsigned int const value) {
324
+ element_ = _get_value(value);
325
+ return *this;
326
+ }
327
+
328
+ inline Z2_field_element::operator unsigned int() const { return element_; }
329
+
330
+ inline Z2_field_element Z2_field_element::get_inverse() const {
331
+ return element_ ? Z2_field_element(1) : Z2_field_element();
332
+ }
333
+
334
+ inline std::pair<Z2_field_element, unsigned int> Z2_field_element::get_partial_inverse(
335
+ unsigned int productOfCharacteristics) const {
336
+ return {get_inverse(), productOfCharacteristics};
337
+ }
338
+
339
+ inline Z2_field_element Z2_field_element::get_additive_identity() { return Z2_field_element(); }
340
+
341
+ inline Z2_field_element Z2_field_element::get_multiplicative_identity() { return Z2_field_element(1); }
342
+
343
+ inline Z2_field_element Z2_field_element::get_partial_multiplicative_identity(
344
+ [[maybe_unused]] unsigned int productOfCharacteristics) {
345
+ return Z2_field_element(1);
346
+ }
347
+
348
+ inline constexpr unsigned int Z2_field_element::get_characteristic() { return 2; }
349
+
350
+ inline Z2_field_element::Element Z2_field_element::get_value() const { return element_; }
351
+
352
+ } // namespace persistence_fields
353
+ } // namespace Gudhi
354
+
355
+ #endif // MATRIX_FIELD_Z2_H_