okstra 0.107.2 → 0.109.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/package.json +1 -1
- package/runtime/BUILD.json +2 -2
- package/runtime/prompts/lead/okstra-lead-contract.md +1 -1
- package/runtime/prompts/profiles/_common-contract.md +3 -2
- package/runtime/python/okstra_ctl/graphify_cmd.py +225 -0
- package/runtime/python/okstra_ctl/resolve_task_key.py +15 -9
- package/runtime/python/okstra_ctl/session.py +44 -0
- package/runtime/python/okstra_project/__init__.py +2 -0
- package/runtime/python/okstra_project/state.py +36 -0
- package/runtime/python/okstra_token_usage/claude.py +15 -9
- package/runtime/python/okstra_token_usage/cli.py +23 -0
- package/runtime/python/okstra_token_usage/collect.py +163 -4
- package/runtime/python/okstra_vendor/__init__.py +41 -0
- package/runtime/python/okstra_vendor/graphify/.vendored-version +1 -0
- package/runtime/python/okstra_vendor/graphify/__init__.py +28 -0
- package/runtime/python/okstra_vendor/graphify/__main__.py +1371 -0
- package/runtime/python/okstra_vendor/graphify/analyze.py +540 -0
- package/runtime/python/okstra_vendor/graphify/benchmark.py +129 -0
- package/runtime/python/okstra_vendor/graphify/build.py +107 -0
- package/runtime/python/okstra_vendor/graphify/cache.py +169 -0
- package/runtime/python/okstra_vendor/graphify/cluster.py +137 -0
- package/runtime/python/okstra_vendor/graphify/detect.py +510 -0
- package/runtime/python/okstra_vendor/graphify/export.py +1014 -0
- package/runtime/python/okstra_vendor/graphify/extract.py +3277 -0
- package/runtime/python/okstra_vendor/graphify/hooks.py +220 -0
- package/runtime/python/okstra_vendor/graphify/ingest.py +297 -0
- package/runtime/python/okstra_vendor/graphify/manifest.py +4 -0
- package/runtime/python/okstra_vendor/graphify/report.py +175 -0
- package/runtime/python/okstra_vendor/graphify/security.py +203 -0
- package/runtime/python/okstra_vendor/graphify/serve.py +373 -0
- package/runtime/python/okstra_vendor/graphify/skill-aider.md +1184 -0
- package/runtime/python/okstra_vendor/graphify/skill-claw.md +1184 -0
- package/runtime/python/okstra_vendor/graphify/skill-codex.md +1242 -0
- package/runtime/python/okstra_vendor/graphify/skill-copilot.md +1268 -0
- package/runtime/python/okstra_vendor/graphify/skill-droid.md +1239 -0
- package/runtime/python/okstra_vendor/graphify/skill-kiro.md +1183 -0
- package/runtime/python/okstra_vendor/graphify/skill-opencode.md +1238 -0
- package/runtime/python/okstra_vendor/graphify/skill-trae.md +1208 -0
- package/runtime/python/okstra_vendor/graphify/skill-vscode.md +253 -0
- package/runtime/python/okstra_vendor/graphify/skill-windows.md +1245 -0
- package/runtime/python/okstra_vendor/graphify/skill.md +1319 -0
- package/runtime/python/okstra_vendor/graphify/transcribe.py +182 -0
- package/runtime/python/okstra_vendor/graphify/validate.py +72 -0
- package/runtime/python/okstra_vendor/graphify/watch.py +188 -0
- package/runtime/python/okstra_vendor/graphify/wiki.py +214 -0
- package/runtime/python/okstra_vendor/networkx/__init__.py +62 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/__init__.py +134 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/__init__.py +26 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/clique.py +259 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/clustering_coefficient.py +71 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/connectivity.py +412 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/density.py +396 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/distance_measures.py +150 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/dominating_set.py +149 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/kcomponents.py +369 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/matching.py +44 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/maxcut.py +143 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/ramsey.py +53 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/steinertree.py +265 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_approx_clust_coeff.py +41 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_clique.py +112 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_connectivity.py +199 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_density.py +146 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_distance_measures.py +59 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_dominating_set.py +78 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_kcomponents.py +303 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_matching.py +8 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_maxcut.py +94 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_ramsey.py +31 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_steinertree.py +306 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_traveling_salesman.py +1014 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_treewidth.py +274 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_vertex_cover.py +68 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/traveling_salesman.py +1508 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/treewidth.py +255 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/approximation/vertex_cover.py +83 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/__init__.py +5 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/connectivity.py +122 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/correlation.py +302 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/mixing.py +255 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/neighbor_degree.py +160 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/pairs.py +127 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/base_test.py +81 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_connectivity.py +143 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_correlation.py +122 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_mixing.py +174 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_neighbor_degree.py +107 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_pairs.py +87 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/asteroidal.py +164 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/__init__.py +88 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/basic.py +322 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/centrality.py +290 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/cluster.py +289 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/covering.py +57 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/edgelist.py +360 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/extendability.py +105 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/generators.py +603 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/link_analysis.py +316 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/matching.py +590 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/matrix.py +232 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/projection.py +526 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/redundancy.py +112 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/spectral.py +69 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_basic.py +125 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_centrality.py +192 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_cluster.py +84 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_covering.py +33 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_edgelist.py +240 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_extendability.py +334 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_generators.py +407 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_link_analysis.py +218 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matching.py +327 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matrix.py +138 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_project.py +409 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_redundancy.py +35 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_spectral_bipartivity.py +80 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/boundary.py +168 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/bridges.py +205 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/broadcasting.py +164 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/__init__.py +20 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/betweenness.py +591 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/betweenness_subset.py +236 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/closeness.py +282 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_betweenness.py +364 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_betweenness_subset.py +227 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_closeness.py +96 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/degree_alg.py +150 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/dispersion.py +107 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/eigenvector.py +357 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/flow_matrix.py +130 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/group.py +787 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/harmonic.py +88 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/katz.py +331 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/laplacian.py +150 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/load.py +200 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/percolation.py +128 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/reaching.py +209 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/second_order.py +141 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/subgraph_alg.py +361 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality.py +923 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality_subset.py +354 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_closeness_centrality.py +274 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality.py +259 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality_subset.py +147 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_closeness.py +43 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_degree_centrality.py +144 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_dispersion.py +73 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_eigenvector_centrality.py +186 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_group.py +277 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_harmonic_centrality.py +122 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_katz_centrality.py +345 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_laplacian_centrality.py +220 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_load_centrality.py +344 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_percolation_centrality.py +87 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_reaching.py +140 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_second_order_centrality.py +82 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_subgraph.py +110 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_trophic.py +302 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_voterank.py +64 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/trophic.py +181 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/centrality/voterank_alg.py +95 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/chains.py +172 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/chordal.py +443 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/clique.py +818 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/cluster.py +732 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/coloring/__init__.py +4 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/coloring/equitable_coloring.py +505 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/coloring/greedy_coloring.py +565 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/test_coloring.py +863 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/communicability_alg.py +163 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/__init__.py +28 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/asyn_fluid.py +153 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/bipartitions.py +354 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/centrality.py +171 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/community_utils.py +30 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/divisive.py +216 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/kclique.py +79 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/label_propagation.py +338 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/leiden.py +162 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/local.py +220 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/louvain.py +384 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/lukes.py +227 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/modularity_max.py +452 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/quality.py +347 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_asyn_fluid.py +147 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_bipartitions.py +157 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_centrality.py +85 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_divisive.py +106 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_kclique.py +91 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_label_propagation.py +241 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_leiden.py +138 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_local.py +76 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_louvain.py +264 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_lukes.py +152 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_modularity_max.py +340 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_quality.py +139 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_utils.py +26 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/__init__.py +6 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/attracting.py +115 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/biconnected.py +394 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/connected.py +282 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/semiconnected.py +71 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/strongly_connected.py +359 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_attracting.py +70 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_biconnected.py +248 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_connected.py +138 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_semiconnected.py +55 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_strongly_connected.py +193 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_weakly_connected.py +96 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/components/weakly_connected.py +196 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/__init__.py +11 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/connectivity.py +811 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/cuts.py +616 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/disjoint_paths.py +408 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/edge_augmentation.py +1270 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/edge_kcomponents.py +592 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/kcomponents.py +220 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/kcutsets.py +235 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/stoerwagner.py +152 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_connectivity.py +421 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_cuts.py +309 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_disjoint_paths.py +249 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_augmentation.py +502 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_kcomponents.py +488 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcomponents.py +323 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcutsets.py +280 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_stoer_wagner.py +102 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/utils.py +88 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/core.py +588 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/covering.py +142 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/cuts.py +416 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/cycles.py +1234 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/d_separation.py +677 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/dag.py +1392 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/distance_measures.py +1095 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/distance_regular.py +272 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/dominance.py +142 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/dominating.py +268 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/efficiency_measures.py +167 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/euler.py +470 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/__init__.py +11 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/boykovkolmogorov.py +370 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/capacityscaling.py +407 -0
- package/runtime/python/okstra_vendor/networkx/algorithms/flow/dinitz_alg.py +238 -0
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- package/runtime/python/okstra_vendor/networkx/generators/tests/test_interval_graph.py +144 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_joint_degree_seq.py +125 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_lattice.py +264 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_line.py +316 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_mycielski.py +30 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_nonisomorphic_trees.py +82 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_random_clustered.py +33 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_random_graphs.py +495 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_small.py +220 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_spectral_graph_forge.py +49 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_stochastic.py +72 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_sudoku.py +92 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_time_series.py +64 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_trees.py +195 -0
- package/runtime/python/okstra_vendor/networkx/generators/tests/test_triads.py +15 -0
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- package/runtime/python/okstra_vendor/networkx/generators/triads.py +94 -0
- package/runtime/python/okstra_vendor/networkx/lazy_imports.py +188 -0
- package/runtime/python/okstra_vendor/networkx/linalg/__init__.py +13 -0
- package/runtime/python/okstra_vendor/networkx/linalg/algebraicconnectivity.py +650 -0
- package/runtime/python/okstra_vendor/networkx/linalg/attrmatrix.py +466 -0
- package/runtime/python/okstra_vendor/networkx/linalg/bethehessianmatrix.py +77 -0
- package/runtime/python/okstra_vendor/networkx/linalg/graphmatrix.py +168 -0
- package/runtime/python/okstra_vendor/networkx/linalg/laplacianmatrix.py +512 -0
- package/runtime/python/okstra_vendor/networkx/linalg/modularitymatrix.py +166 -0
- package/runtime/python/okstra_vendor/networkx/linalg/spectrum.py +186 -0
- package/runtime/python/okstra_vendor/networkx/linalg/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_algebraic_connectivity.py +400 -0
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_attrmatrix.py +108 -0
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_bethehessian.py +40 -0
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_graphmatrix.py +275 -0
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_laplacian.py +334 -0
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_modularity.py +86 -0
- package/runtime/python/okstra_vendor/networkx/linalg/tests/test_spectrum.py +70 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/__init__.py +17 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/adjlist.py +330 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/edgelist.py +489 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/gexf.py +1084 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/gml.py +879 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/graph6.py +427 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/graphml.py +1053 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/__init__.py +19 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/adjacency.py +156 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/cytoscape.py +190 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/node_link.py +261 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/test_adjacency.py +78 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/test_cytoscape.py +78 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/test_node_link.py +109 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tests/test_tree.py +48 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/json_graph/tree.py +137 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/leda.py +108 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/multiline_adjlist.py +393 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/p2g.py +113 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/pajek.py +286 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/sparse6.py +379 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_adjlist.py +354 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_edgelist.py +318 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_gexf.py +612 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_gml.py +744 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_graph6.py +181 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_graphml.py +1531 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_leda.py +30 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_p2g.py +63 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_pajek.py +128 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_sparse6.py +166 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/tests/test_text.py +1742 -0
- package/runtime/python/okstra_vendor/networkx/readwrite/text.py +851 -0
- package/runtime/python/okstra_vendor/networkx/relabel.py +285 -0
- package/runtime/python/okstra_vendor/networkx/tests/__init__.py +0 -0
- package/runtime/python/okstra_vendor/networkx/tests/test_all_random_functions.py +248 -0
- package/runtime/python/okstra_vendor/networkx/tests/test_convert.py +321 -0
- package/runtime/python/okstra_vendor/networkx/tests/test_convert_numpy.py +531 -0
- package/runtime/python/okstra_vendor/networkx/tests/test_convert_pandas.py +349 -0
- package/runtime/python/okstra_vendor/networkx/tests/test_convert_scipy.py +281 -0
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- package/runtime/python/okstra_vendor/networkx/tests/test_relabel.py +349 -0
- package/runtime/python/okstra_vendor/networkx/tests/test_removed_functions_exception_messages.py +8 -0
- package/runtime/python/okstra_vendor/networkx/utils/__init__.py +8 -0
- package/runtime/python/okstra_vendor/networkx/utils/backends.py +2171 -0
- package/runtime/python/okstra_vendor/networkx/utils/configs.py +396 -0
- package/runtime/python/okstra_vendor/networkx/utils/decorators.py +1233 -0
- package/runtime/python/okstra_vendor/networkx/utils/heaps.py +338 -0
- package/runtime/python/okstra_vendor/networkx/utils/mapped_queue.py +297 -0
- package/runtime/python/okstra_vendor/networkx/utils/misc.py +703 -0
- package/runtime/python/okstra_vendor/networkx/utils/random_sequence.py +198 -0
- package/runtime/python/okstra_vendor/networkx/utils/rcm.py +159 -0
- package/runtime/python/okstra_vendor/networkx/utils/tests/__init__.py +0 -0
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- package/runtime/python/okstra_vendor/networkx/utils/tests/test_backends.py +225 -0
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- package/runtime/python/okstra_vendor/networkx/utils/tests/test_random_sequence.py +53 -0
- package/runtime/python/okstra_vendor/networkx/utils/tests/test_rcm.py +63 -0
- package/runtime/python/okstra_vendor/networkx/utils/tests/test_unionfind.py +55 -0
- package/runtime/python/okstra_vendor/networkx/utils/union_find.py +106 -0
- package/runtime/skills/okstra-graphify/SKILL.md +161 -0
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- package/runtime/templates/reports/settings.template.json +4 -0
- package/runtime/validators/forbidden_actions.py +8 -2
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- package/src/cli-registry.mjs +7 -0
- package/src/commands/graphify.mjs +32 -0
- package/src/commands/lifecycle/doctor.mjs +9 -0
- package/src/lib/skill-catalog.mjs +1 -0
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def test_K5(self):
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def test_K5_endpoints(self):
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def test_P3_normalized(self):
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def test_P3(self):
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b_answer = {0: 0.0, 1: 1.0, 2: 0.0}
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def test_sample_from_P3(self):
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b_answer = {0: 0.0, 1: 1.0, 2: 0.0}
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b = nx.betweenness_centrality(G, k=3, weight=None, normalized=False, seed=1)
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b = nx.betweenness_centrality(G, k=2, weight=None, normalized=False, seed=1)
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def test_P3_endpoints(self):
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b_answer = {0: 2.0, 1: 3.0, 2: 2.0}
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b = nx.betweenness_centrality(G, weight=None, normalized=False, endpoints=True)
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b_answer = {0: 2 / 3, 1: 1.0, 2: 2 / 3}
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def test_krackhardt_kite_graph(self):
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"""Betweenness centrality: Krackhardt kite graph"""
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G = nx.krackhardt_kite_graph()
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b_answer = {
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0: 1.667,
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3: 7.333,
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}
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for b in b_answer:
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b_answer[b] /= 2
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b = nx.betweenness_centrality(G, weight=None, normalized=False)
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assert b[n] == pytest.approx(b_answer[n], abs=1e-3)
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def test_krackhardt_kite_graph_normalized(self):
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"""Betweenness centrality: Krackhardt kite graph normalized"""
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G = nx.krackhardt_kite_graph()
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b_answer = {
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0: 0.023,
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1: 0.023,
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2: 0.000,
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3: 0.102,
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4: 0.000,
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5: 0.231,
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7: 0.389,
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8: 0.222,
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9: 0.000,
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}
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b = nx.betweenness_centrality(G, weight=None, normalized=True)
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for n in sorted(G):
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assert b[n] == pytest.approx(b_answer[n], abs=1e-3)
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def test_florentine_families_graph(self):
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"""Betweenness centrality: Florentine families graph"""
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G = nx.florentine_families_graph()
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b_answer = {
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"Acciaiuoli": 0.000,
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"Albizzi": 0.212,
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"Barbadori": 0.093,
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+
"Bischeri": 0.104,
|
|
136
|
+
"Castellani": 0.055,
|
|
137
|
+
"Ginori": 0.000,
|
|
138
|
+
"Guadagni": 0.255,
|
|
139
|
+
"Lamberteschi": 0.000,
|
|
140
|
+
"Medici": 0.522,
|
|
141
|
+
"Pazzi": 0.000,
|
|
142
|
+
"Peruzzi": 0.022,
|
|
143
|
+
"Ridolfi": 0.114,
|
|
144
|
+
"Salviati": 0.143,
|
|
145
|
+
"Strozzi": 0.103,
|
|
146
|
+
"Tornabuoni": 0.092,
|
|
147
|
+
}
|
|
148
|
+
|
|
149
|
+
b = nx.betweenness_centrality(G, weight=None, normalized=True)
|
|
150
|
+
for n in sorted(G):
|
|
151
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-3)
|
|
152
|
+
|
|
153
|
+
def test_les_miserables_graph(self):
|
|
154
|
+
"""Betweenness centrality: Les Miserables graph"""
|
|
155
|
+
G = nx.les_miserables_graph()
|
|
156
|
+
b_answer = {
|
|
157
|
+
"Napoleon": 0.000,
|
|
158
|
+
"Myriel": 0.177,
|
|
159
|
+
"MlleBaptistine": 0.000,
|
|
160
|
+
"MmeMagloire": 0.000,
|
|
161
|
+
"CountessDeLo": 0.000,
|
|
162
|
+
"Geborand": 0.000,
|
|
163
|
+
"Champtercier": 0.000,
|
|
164
|
+
"Cravatte": 0.000,
|
|
165
|
+
"Count": 0.000,
|
|
166
|
+
"OldMan": 0.000,
|
|
167
|
+
"Valjean": 0.570,
|
|
168
|
+
"Labarre": 0.000,
|
|
169
|
+
"Marguerite": 0.000,
|
|
170
|
+
"MmeDeR": 0.000,
|
|
171
|
+
"Isabeau": 0.000,
|
|
172
|
+
"Gervais": 0.000,
|
|
173
|
+
"Listolier": 0.000,
|
|
174
|
+
"Tholomyes": 0.041,
|
|
175
|
+
"Fameuil": 0.000,
|
|
176
|
+
"Blacheville": 0.000,
|
|
177
|
+
"Favourite": 0.000,
|
|
178
|
+
"Dahlia": 0.000,
|
|
179
|
+
"Zephine": 0.000,
|
|
180
|
+
"Fantine": 0.130,
|
|
181
|
+
"MmeThenardier": 0.029,
|
|
182
|
+
"Thenardier": 0.075,
|
|
183
|
+
"Cosette": 0.024,
|
|
184
|
+
"Javert": 0.054,
|
|
185
|
+
"Fauchelevent": 0.026,
|
|
186
|
+
"Bamatabois": 0.008,
|
|
187
|
+
"Perpetue": 0.000,
|
|
188
|
+
"Simplice": 0.009,
|
|
189
|
+
"Scaufflaire": 0.000,
|
|
190
|
+
"Woman1": 0.000,
|
|
191
|
+
"Judge": 0.000,
|
|
192
|
+
"Champmathieu": 0.000,
|
|
193
|
+
"Brevet": 0.000,
|
|
194
|
+
"Chenildieu": 0.000,
|
|
195
|
+
"Cochepaille": 0.000,
|
|
196
|
+
"Pontmercy": 0.007,
|
|
197
|
+
"Boulatruelle": 0.000,
|
|
198
|
+
"Eponine": 0.011,
|
|
199
|
+
"Anzelma": 0.000,
|
|
200
|
+
"Woman2": 0.000,
|
|
201
|
+
"MotherInnocent": 0.000,
|
|
202
|
+
"Gribier": 0.000,
|
|
203
|
+
"MmeBurgon": 0.026,
|
|
204
|
+
"Jondrette": 0.000,
|
|
205
|
+
"Gavroche": 0.165,
|
|
206
|
+
"Gillenormand": 0.020,
|
|
207
|
+
"Magnon": 0.000,
|
|
208
|
+
"MlleGillenormand": 0.048,
|
|
209
|
+
"MmePontmercy": 0.000,
|
|
210
|
+
"MlleVaubois": 0.000,
|
|
211
|
+
"LtGillenormand": 0.000,
|
|
212
|
+
"Marius": 0.132,
|
|
213
|
+
"BaronessT": 0.000,
|
|
214
|
+
"Mabeuf": 0.028,
|
|
215
|
+
"Enjolras": 0.043,
|
|
216
|
+
"Combeferre": 0.001,
|
|
217
|
+
"Prouvaire": 0.000,
|
|
218
|
+
"Feuilly": 0.001,
|
|
219
|
+
"Courfeyrac": 0.005,
|
|
220
|
+
"Bahorel": 0.002,
|
|
221
|
+
"Bossuet": 0.031,
|
|
222
|
+
"Joly": 0.002,
|
|
223
|
+
"Grantaire": 0.000,
|
|
224
|
+
"MotherPlutarch": 0.000,
|
|
225
|
+
"Gueulemer": 0.005,
|
|
226
|
+
"Babet": 0.005,
|
|
227
|
+
"Claquesous": 0.005,
|
|
228
|
+
"Montparnasse": 0.004,
|
|
229
|
+
"Toussaint": 0.000,
|
|
230
|
+
"Child1": 0.000,
|
|
231
|
+
"Child2": 0.000,
|
|
232
|
+
"Brujon": 0.000,
|
|
233
|
+
"MmeHucheloup": 0.000,
|
|
234
|
+
}
|
|
235
|
+
|
|
236
|
+
b = nx.betweenness_centrality(G, weight=None, normalized=True)
|
|
237
|
+
for n in sorted(G):
|
|
238
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-3)
|
|
239
|
+
|
|
240
|
+
def test_ladder_graph(self):
|
|
241
|
+
"""Betweenness centrality: Ladder graph"""
|
|
242
|
+
G = nx.Graph() # ladder_graph(3)
|
|
243
|
+
G.add_edges_from([(0, 1), (0, 2), (1, 3), (2, 3), (2, 4), (4, 5), (3, 5)])
|
|
244
|
+
b_answer = {0: 1.667, 1: 1.667, 2: 6.667, 3: 6.667, 4: 1.667, 5: 1.667}
|
|
245
|
+
for b in b_answer:
|
|
246
|
+
b_answer[b] /= 2
|
|
247
|
+
b = nx.betweenness_centrality(G, weight=None, normalized=False)
|
|
248
|
+
for n in sorted(G):
|
|
249
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-3)
|
|
250
|
+
|
|
251
|
+
def test_disconnected_path(self):
|
|
252
|
+
"""Betweenness centrality: disconnected path"""
|
|
253
|
+
G = nx.Graph()
|
|
254
|
+
nx.add_path(G, [0, 1, 2])
|
|
255
|
+
nx.add_path(G, [3, 4, 5, 6])
|
|
256
|
+
b_answer = {0: 0, 1: 1, 2: 0, 3: 0, 4: 2, 5: 2, 6: 0}
|
|
257
|
+
b = nx.betweenness_centrality(G, weight=None, normalized=False)
|
|
258
|
+
for n in sorted(G):
|
|
259
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
260
|
+
|
|
261
|
+
def test_disconnected_path_endpoints(self):
|
|
262
|
+
"""Betweenness centrality: disconnected path endpoints"""
|
|
263
|
+
G = nx.Graph()
|
|
264
|
+
nx.add_path(G, [0, 1, 2])
|
|
265
|
+
nx.add_path(G, [3, 4, 5, 6])
|
|
266
|
+
b_answer = {0: 2, 1: 3, 2: 2, 3: 3, 4: 5, 5: 5, 6: 3}
|
|
267
|
+
b = nx.betweenness_centrality(G, weight=None, normalized=False, endpoints=True)
|
|
268
|
+
for n in sorted(G):
|
|
269
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
270
|
+
# normalized = True case
|
|
271
|
+
b = nx.betweenness_centrality(G, weight=None, normalized=True, endpoints=True)
|
|
272
|
+
for n in sorted(G):
|
|
273
|
+
assert b[n] == pytest.approx(b_answer[n] / 21, abs=1e-7)
|
|
274
|
+
|
|
275
|
+
def test_directed_path(self):
|
|
276
|
+
"""Betweenness centrality: directed path"""
|
|
277
|
+
G = nx.DiGraph()
|
|
278
|
+
nx.add_path(G, [0, 1, 2])
|
|
279
|
+
b = nx.betweenness_centrality(G, weight=None, normalized=False)
|
|
280
|
+
b_answer = {0: 0.0, 1: 1.0, 2: 0.0}
|
|
281
|
+
for n in sorted(G):
|
|
282
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
283
|
+
|
|
284
|
+
def test_directed_path_normalized(self):
|
|
285
|
+
"""Betweenness centrality: directed path normalized"""
|
|
286
|
+
G = nx.DiGraph()
|
|
287
|
+
nx.add_path(G, [0, 1, 2])
|
|
288
|
+
b = nx.betweenness_centrality(G, weight=None, normalized=True)
|
|
289
|
+
b_answer = {0: 0.0, 1: 0.5, 2: 0.0}
|
|
290
|
+
for n in sorted(G):
|
|
291
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
292
|
+
|
|
293
|
+
@pytest.mark.parametrize(
|
|
294
|
+
("normalized", "endpoints", "is_directed", "k", "expected"),
|
|
295
|
+
[
|
|
296
|
+
(True, True, True, None, {0: 1.0, 1: 0.4, 2: 0.4, 3: 0.4, 4: 0.4}),
|
|
297
|
+
(True, True, True, 1, {0: 1.0, 1: 1.0, 2: 0.25, 3: 0.25, 4: 0.25}),
|
|
298
|
+
(True, True, False, None, {0: 1.0, 1: 0.4, 2: 0.4, 3: 0.4, 4: 0.4}),
|
|
299
|
+
(True, True, False, 1, {0: 1.0, 1: 1.0, 2: 0.25, 3: 0.25, 4: 0.25}),
|
|
300
|
+
(True, False, True, None, {0: 1.0, 1: 0, 2: 0.0, 3: 0.0, 4: 0.0}),
|
|
301
|
+
(True, False, True, 1, {0: 1.0, 1: math.nan, 2: 0.0, 3: 0.0, 4: 0.0}),
|
|
302
|
+
(True, False, False, None, {0: 1.0, 1: 0.0, 2: 0.0, 3: 0.0, 4: 0.0}),
|
|
303
|
+
(True, False, False, 1, {0: 1.0, 1: math.nan, 2: 0.0, 3: 0.0, 4: 0.0}),
|
|
304
|
+
(False, True, True, None, {0: 20.0, 1: 8.0, 2: 8.0, 3: 8.0, 4: 8.0}),
|
|
305
|
+
(False, True, True, 1, {0: 20.0, 1: 20.0, 2: 5.0, 3: 5.0, 4: 5.0}),
|
|
306
|
+
(False, True, False, None, {0: 10.0, 1: 4.0, 2: 4.0, 3: 4.0, 4: 4.0}),
|
|
307
|
+
(False, True, False, 1, {0: 10.0, 1: 10.0, 2: 2.5, 3: 2.5, 4: 2.5}),
|
|
308
|
+
(False, False, True, None, {0: 12.0, 1: 0.0, 2: 0.0, 3: 0.0, 4: 0.0}),
|
|
309
|
+
(False, False, True, 1, {0: 12.0, 1: math.nan, 2: 0.0, 3: 0.0, 4: 0.0}),
|
|
310
|
+
(False, False, False, None, {0: 6.0, 1: 0.0, 2: 0.0, 3: 0.0, 4: 0.0}),
|
|
311
|
+
(False, False, False, 1, {0: 6.0, 1: math.nan, 2: 0.0, 3: 0.0, 4: 0.0}),
|
|
312
|
+
],
|
|
313
|
+
)
|
|
314
|
+
def test_scale_with_k_on_star_graph(
|
|
315
|
+
self, normalized, endpoints, is_directed, k, expected
|
|
316
|
+
):
|
|
317
|
+
# seed=1 selects node 1 as the initial node when using k=1.
|
|
318
|
+
# Recall node 0 is the center of the star graph.
|
|
319
|
+
G = nx.star_graph(4)
|
|
320
|
+
if is_directed:
|
|
321
|
+
G = G.to_directed()
|
|
322
|
+
b = nx.betweenness_centrality(
|
|
323
|
+
G, k=k, seed=1, endpoints=endpoints, normalized=normalized
|
|
324
|
+
)
|
|
325
|
+
assert b == pytest.approx(expected, nan_ok=True)
|
|
326
|
+
|
|
327
|
+
@pytest.mark.parametrize(
|
|
328
|
+
("normalized", "endpoints", "is_directed", "k", "expected"),
|
|
329
|
+
[
|
|
330
|
+
(
|
|
331
|
+
*(True, True, True, None), # Use *() splatting for better autoformat
|
|
332
|
+
{0: 14 / 20, 1: 14 / 20, 2: 14 / 20, 3: 14 / 20, 4: 14 / 20},
|
|
333
|
+
),
|
|
334
|
+
(
|
|
335
|
+
*(True, True, True, 3),
|
|
336
|
+
{0: 9 / 12, 1: 11 / 12, 2: 9 / 12, 3: 6 / 12, 4: 7 / 12},
|
|
337
|
+
),
|
|
338
|
+
(
|
|
339
|
+
*(True, True, False, None),
|
|
340
|
+
{0: 10 / 20, 1: 10 / 20, 2: 10 / 20, 3: 10 / 20, 4: 10 / 20},
|
|
341
|
+
),
|
|
342
|
+
(
|
|
343
|
+
*(True, True, False, 3),
|
|
344
|
+
{0: 8 / 12, 1: 7 / 12, 2: 4 / 12, 3: 4 / 12, 4: 7 / 12},
|
|
345
|
+
),
|
|
346
|
+
(
|
|
347
|
+
*(True, False, True, None),
|
|
348
|
+
{0: 6 / 12, 1: 6 / 12, 2: 6 / 12, 3: 6 / 12, 4: 6 / 12},
|
|
349
|
+
),
|
|
350
|
+
(
|
|
351
|
+
*(True, False, True, 3),
|
|
352
|
+
# Use 6 instead of 9 for denominator for source nodes 0, 1, and 4
|
|
353
|
+
{0: 3 / 6, 1: 5 / 6, 2: 6 / 9, 3: 3 / 9, 4: 1 / 6},
|
|
354
|
+
),
|
|
355
|
+
(
|
|
356
|
+
*(True, False, False, None),
|
|
357
|
+
{0: 2 / 12, 1: 2 / 12, 2: 2 / 12, 3: 2 / 12, 4: 2 / 12},
|
|
358
|
+
),
|
|
359
|
+
(
|
|
360
|
+
*(True, False, False, 3),
|
|
361
|
+
# Use 6 instead of 9 for denominator for source nodes 0, 1, and 4
|
|
362
|
+
{0: 2 / 6, 1: 1 / 6, 2: 1 / 9, 3: 1 / 9, 4: 1 / 6},
|
|
363
|
+
),
|
|
364
|
+
(False, True, True, None, {0: 14, 1: 14, 2: 14, 3: 14, 4: 14}),
|
|
365
|
+
(
|
|
366
|
+
*(False, True, True, 3),
|
|
367
|
+
{0: 9 * 5 / 3, 1: 11 * 5 / 3, 2: 9 * 5 / 3, 3: 6 * 5 / 3, 4: 7 * 5 / 3},
|
|
368
|
+
),
|
|
369
|
+
(False, True, False, None, {0: 5, 1: 5, 2: 5, 3: 5, 4: 5}),
|
|
370
|
+
(
|
|
371
|
+
*(False, True, False, 3),
|
|
372
|
+
{0: 8 * 5 / 6, 1: 7 * 5 / 6, 2: 4 * 5 / 6, 3: 4 * 5 / 6, 4: 7 * 5 / 6},
|
|
373
|
+
),
|
|
374
|
+
(False, False, True, None, {0: 6, 1: 6, 2: 6, 3: 6, 4: 6}),
|
|
375
|
+
(
|
|
376
|
+
*(False, False, True, 3),
|
|
377
|
+
# Use 2 instead of 3 for denominator for source nodes 0, 1, and 4
|
|
378
|
+
{0: 3 * 4 / 2, 1: 5 * 4 / 2, 2: 6 * 4 / 3, 3: 3 * 4 / 3, 4: 1 * 4 / 2},
|
|
379
|
+
),
|
|
380
|
+
(False, False, False, None, {0: 1, 1: 1, 2: 1, 3: 1, 4: 1}),
|
|
381
|
+
(
|
|
382
|
+
*(False, False, False, 3),
|
|
383
|
+
# Use 4 instead of 6 for denominator for source nodes 0, 1, and 4
|
|
384
|
+
{0: 2 * 4 / 4, 1: 1 * 4 / 4, 2: 1 * 4 / 6, 3: 1 * 4 / 6, 4: 1 * 4 / 4},
|
|
385
|
+
),
|
|
386
|
+
],
|
|
387
|
+
)
|
|
388
|
+
def test_scale_with_k_on_cycle_graph(
|
|
389
|
+
self, normalized, endpoints, is_directed, k, expected
|
|
390
|
+
):
|
|
391
|
+
# seed=1 selects nodes 0, 1, and 4 as the initial nodes when using k=3.
|
|
392
|
+
G = nx.cycle_graph(5, create_using=nx.DiGraph if is_directed else nx.Graph)
|
|
393
|
+
b = nx.betweenness_centrality(
|
|
394
|
+
G, k=k, seed=1, endpoints=endpoints, normalized=normalized
|
|
395
|
+
)
|
|
396
|
+
assert b == pytest.approx(expected)
|
|
397
|
+
|
|
398
|
+
def test_k_out_of_bounds_raises(self):
|
|
399
|
+
G = nx.cycle_graph(4)
|
|
400
|
+
with pytest.raises(ValueError, match="larger"):
|
|
401
|
+
nx.betweenness_centrality(G, k=5)
|
|
402
|
+
with pytest.raises(ValueError, match="negative"):
|
|
403
|
+
nx.betweenness_centrality(G, k=-1)
|
|
404
|
+
with pytest.raises(ZeroDivisionError):
|
|
405
|
+
nx.betweenness_centrality(G, k=0)
|
|
406
|
+
with pytest.raises(ZeroDivisionError):
|
|
407
|
+
nx.betweenness_centrality(G, k=0, normalized=False)
|
|
408
|
+
# Test edge case: use full population when k == len(G)
|
|
409
|
+
# Should we warn or raise instead?
|
|
410
|
+
b1 = nx.betweenness_centrality(G, k=4, endpoints=False)
|
|
411
|
+
b2 = nx.betweenness_centrality(G, endpoints=False)
|
|
412
|
+
assert b1 == b2
|
|
413
|
+
|
|
414
|
+
|
|
415
|
+
class TestWeightedBetweennessCentrality:
|
|
416
|
+
def test_K5(self):
|
|
417
|
+
"""Weighted betweenness centrality: K5"""
|
|
418
|
+
G = nx.complete_graph(5)
|
|
419
|
+
b = nx.betweenness_centrality(G, weight="weight", normalized=False)
|
|
420
|
+
b_answer = {0: 0.0, 1: 0.0, 2: 0.0, 3: 0.0, 4: 0.0}
|
|
421
|
+
for n in sorted(G):
|
|
422
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
423
|
+
|
|
424
|
+
def test_P3_normalized(self):
|
|
425
|
+
"""Weighted betweenness centrality: P3 normalized"""
|
|
426
|
+
G = nx.path_graph(3)
|
|
427
|
+
b = nx.betweenness_centrality(G, weight="weight", normalized=True)
|
|
428
|
+
b_answer = {0: 0.0, 1: 1.0, 2: 0.0}
|
|
429
|
+
for n in sorted(G):
|
|
430
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
431
|
+
|
|
432
|
+
def test_P3(self):
|
|
433
|
+
"""Weighted betweenness centrality: P3"""
|
|
434
|
+
G = nx.path_graph(3)
|
|
435
|
+
b_answer = {0: 0.0, 1: 1.0, 2: 0.0}
|
|
436
|
+
b = nx.betweenness_centrality(G, weight="weight", normalized=False)
|
|
437
|
+
for n in sorted(G):
|
|
438
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
439
|
+
|
|
440
|
+
def test_krackhardt_kite_graph(self):
|
|
441
|
+
"""Weighted betweenness centrality: Krackhardt kite graph"""
|
|
442
|
+
G = nx.krackhardt_kite_graph()
|
|
443
|
+
b_answer = {
|
|
444
|
+
0: 1.667,
|
|
445
|
+
1: 1.667,
|
|
446
|
+
2: 0.000,
|
|
447
|
+
3: 7.333,
|
|
448
|
+
4: 0.000,
|
|
449
|
+
5: 16.667,
|
|
450
|
+
6: 16.667,
|
|
451
|
+
7: 28.000,
|
|
452
|
+
8: 16.000,
|
|
453
|
+
9: 0.000,
|
|
454
|
+
}
|
|
455
|
+
for b in b_answer:
|
|
456
|
+
b_answer[b] /= 2
|
|
457
|
+
|
|
458
|
+
b = nx.betweenness_centrality(G, weight="weight", normalized=False)
|
|
459
|
+
|
|
460
|
+
for n in sorted(G):
|
|
461
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-3)
|
|
462
|
+
|
|
463
|
+
def test_krackhardt_kite_graph_normalized(self):
|
|
464
|
+
"""Weighted betweenness centrality:
|
|
465
|
+
Krackhardt kite graph normalized
|
|
466
|
+
"""
|
|
467
|
+
G = nx.krackhardt_kite_graph()
|
|
468
|
+
b_answer = {
|
|
469
|
+
0: 0.023,
|
|
470
|
+
1: 0.023,
|
|
471
|
+
2: 0.000,
|
|
472
|
+
3: 0.102,
|
|
473
|
+
4: 0.000,
|
|
474
|
+
5: 0.231,
|
|
475
|
+
6: 0.231,
|
|
476
|
+
7: 0.389,
|
|
477
|
+
8: 0.222,
|
|
478
|
+
9: 0.000,
|
|
479
|
+
}
|
|
480
|
+
b = nx.betweenness_centrality(G, weight="weight", normalized=True)
|
|
481
|
+
|
|
482
|
+
for n in sorted(G):
|
|
483
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-3)
|
|
484
|
+
|
|
485
|
+
def test_florentine_families_graph(self):
|
|
486
|
+
"""Weighted betweenness centrality:
|
|
487
|
+
Florentine families graph"""
|
|
488
|
+
G = nx.florentine_families_graph()
|
|
489
|
+
b_answer = {
|
|
490
|
+
"Acciaiuoli": 0.000,
|
|
491
|
+
"Albizzi": 0.212,
|
|
492
|
+
"Barbadori": 0.093,
|
|
493
|
+
"Bischeri": 0.104,
|
|
494
|
+
"Castellani": 0.055,
|
|
495
|
+
"Ginori": 0.000,
|
|
496
|
+
"Guadagni": 0.255,
|
|
497
|
+
"Lamberteschi": 0.000,
|
|
498
|
+
"Medici": 0.522,
|
|
499
|
+
"Pazzi": 0.000,
|
|
500
|
+
"Peruzzi": 0.022,
|
|
501
|
+
"Ridolfi": 0.114,
|
|
502
|
+
"Salviati": 0.143,
|
|
503
|
+
"Strozzi": 0.103,
|
|
504
|
+
"Tornabuoni": 0.092,
|
|
505
|
+
}
|
|
506
|
+
|
|
507
|
+
b = nx.betweenness_centrality(G, weight="weight", normalized=True)
|
|
508
|
+
for n in sorted(G):
|
|
509
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-3)
|
|
510
|
+
|
|
511
|
+
def test_les_miserables_graph(self):
|
|
512
|
+
"""Weighted betweenness centrality: Les Miserables graph"""
|
|
513
|
+
G = nx.les_miserables_graph()
|
|
514
|
+
b_answer = {
|
|
515
|
+
"Napoleon": 0.000,
|
|
516
|
+
"Myriel": 0.177,
|
|
517
|
+
"MlleBaptistine": 0.000,
|
|
518
|
+
"MmeMagloire": 0.000,
|
|
519
|
+
"CountessDeLo": 0.000,
|
|
520
|
+
"Geborand": 0.000,
|
|
521
|
+
"Champtercier": 0.000,
|
|
522
|
+
"Cravatte": 0.000,
|
|
523
|
+
"Count": 0.000,
|
|
524
|
+
"OldMan": 0.000,
|
|
525
|
+
"Valjean": 0.454,
|
|
526
|
+
"Labarre": 0.000,
|
|
527
|
+
"Marguerite": 0.009,
|
|
528
|
+
"MmeDeR": 0.000,
|
|
529
|
+
"Isabeau": 0.000,
|
|
530
|
+
"Gervais": 0.000,
|
|
531
|
+
"Listolier": 0.000,
|
|
532
|
+
"Tholomyes": 0.066,
|
|
533
|
+
"Fameuil": 0.000,
|
|
534
|
+
"Blacheville": 0.000,
|
|
535
|
+
"Favourite": 0.000,
|
|
536
|
+
"Dahlia": 0.000,
|
|
537
|
+
"Zephine": 0.000,
|
|
538
|
+
"Fantine": 0.114,
|
|
539
|
+
"MmeThenardier": 0.046,
|
|
540
|
+
"Thenardier": 0.129,
|
|
541
|
+
"Cosette": 0.075,
|
|
542
|
+
"Javert": 0.193,
|
|
543
|
+
"Fauchelevent": 0.026,
|
|
544
|
+
"Bamatabois": 0.080,
|
|
545
|
+
"Perpetue": 0.000,
|
|
546
|
+
"Simplice": 0.001,
|
|
547
|
+
"Scaufflaire": 0.000,
|
|
548
|
+
"Woman1": 0.000,
|
|
549
|
+
"Judge": 0.000,
|
|
550
|
+
"Champmathieu": 0.000,
|
|
551
|
+
"Brevet": 0.000,
|
|
552
|
+
"Chenildieu": 0.000,
|
|
553
|
+
"Cochepaille": 0.000,
|
|
554
|
+
"Pontmercy": 0.023,
|
|
555
|
+
"Boulatruelle": 0.000,
|
|
556
|
+
"Eponine": 0.023,
|
|
557
|
+
"Anzelma": 0.000,
|
|
558
|
+
"Woman2": 0.000,
|
|
559
|
+
"MotherInnocent": 0.000,
|
|
560
|
+
"Gribier": 0.000,
|
|
561
|
+
"MmeBurgon": 0.026,
|
|
562
|
+
"Jondrette": 0.000,
|
|
563
|
+
"Gavroche": 0.285,
|
|
564
|
+
"Gillenormand": 0.024,
|
|
565
|
+
"Magnon": 0.005,
|
|
566
|
+
"MlleGillenormand": 0.036,
|
|
567
|
+
"MmePontmercy": 0.005,
|
|
568
|
+
"MlleVaubois": 0.000,
|
|
569
|
+
"LtGillenormand": 0.015,
|
|
570
|
+
"Marius": 0.072,
|
|
571
|
+
"BaronessT": 0.004,
|
|
572
|
+
"Mabeuf": 0.089,
|
|
573
|
+
"Enjolras": 0.003,
|
|
574
|
+
"Combeferre": 0.000,
|
|
575
|
+
"Prouvaire": 0.000,
|
|
576
|
+
"Feuilly": 0.004,
|
|
577
|
+
"Courfeyrac": 0.001,
|
|
578
|
+
"Bahorel": 0.007,
|
|
579
|
+
"Bossuet": 0.028,
|
|
580
|
+
"Joly": 0.000,
|
|
581
|
+
"Grantaire": 0.036,
|
|
582
|
+
"MotherPlutarch": 0.000,
|
|
583
|
+
"Gueulemer": 0.025,
|
|
584
|
+
"Babet": 0.015,
|
|
585
|
+
"Claquesous": 0.042,
|
|
586
|
+
"Montparnasse": 0.050,
|
|
587
|
+
"Toussaint": 0.011,
|
|
588
|
+
"Child1": 0.000,
|
|
589
|
+
"Child2": 0.000,
|
|
590
|
+
"Brujon": 0.002,
|
|
591
|
+
"MmeHucheloup": 0.034,
|
|
592
|
+
}
|
|
593
|
+
|
|
594
|
+
b = nx.betweenness_centrality(G, weight="weight", normalized=True)
|
|
595
|
+
for n in sorted(G):
|
|
596
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-3)
|
|
597
|
+
|
|
598
|
+
def test_ladder_graph(self):
|
|
599
|
+
"""Weighted betweenness centrality: Ladder graph"""
|
|
600
|
+
G = nx.Graph() # ladder_graph(3)
|
|
601
|
+
G.add_edges_from([(0, 1), (0, 2), (1, 3), (2, 3), (2, 4), (4, 5), (3, 5)])
|
|
602
|
+
b_answer = {0: 1.667, 1: 1.667, 2: 6.667, 3: 6.667, 4: 1.667, 5: 1.667}
|
|
603
|
+
for b in b_answer:
|
|
604
|
+
b_answer[b] /= 2
|
|
605
|
+
b = nx.betweenness_centrality(G, weight="weight", normalized=False)
|
|
606
|
+
for n in sorted(G):
|
|
607
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-3)
|
|
608
|
+
|
|
609
|
+
def test_G(self):
|
|
610
|
+
"""Weighted betweenness centrality: G"""
|
|
611
|
+
G = weighted_G()
|
|
612
|
+
b_answer = {0: 2.0, 1: 0.0, 2: 4.0, 3: 3.0, 4: 4.0, 5: 0.0}
|
|
613
|
+
b = nx.betweenness_centrality(G, weight="weight", normalized=False)
|
|
614
|
+
for n in sorted(G):
|
|
615
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
616
|
+
|
|
617
|
+
def test_G2(self):
|
|
618
|
+
"""Weighted betweenness centrality: G2"""
|
|
619
|
+
G = nx.DiGraph()
|
|
620
|
+
G.add_weighted_edges_from(
|
|
621
|
+
[
|
|
622
|
+
("s", "u", 10),
|
|
623
|
+
("s", "x", 5),
|
|
624
|
+
("u", "v", 1),
|
|
625
|
+
("u", "x", 2),
|
|
626
|
+
("v", "y", 1),
|
|
627
|
+
("x", "u", 3),
|
|
628
|
+
("x", "v", 5),
|
|
629
|
+
("x", "y", 2),
|
|
630
|
+
("y", "s", 7),
|
|
631
|
+
("y", "v", 6),
|
|
632
|
+
]
|
|
633
|
+
)
|
|
634
|
+
|
|
635
|
+
b_answer = {"y": 5.0, "x": 5.0, "s": 4.0, "u": 2.0, "v": 2.0}
|
|
636
|
+
|
|
637
|
+
b = nx.betweenness_centrality(G, weight="weight", normalized=False)
|
|
638
|
+
for n in sorted(G):
|
|
639
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
640
|
+
|
|
641
|
+
def test_G3(self):
|
|
642
|
+
"""Weighted betweenness centrality: G3"""
|
|
643
|
+
G = nx.MultiGraph(weighted_G())
|
|
644
|
+
es = list(G.edges(data=True))[::2] # duplicate every other edge
|
|
645
|
+
G.add_edges_from(es)
|
|
646
|
+
b_answer = {0: 2.0, 1: 0.0, 2: 4.0, 3: 3.0, 4: 4.0, 5: 0.0}
|
|
647
|
+
b = nx.betweenness_centrality(G, weight="weight", normalized=False)
|
|
648
|
+
for n in sorted(G):
|
|
649
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
650
|
+
|
|
651
|
+
def test_G4(self):
|
|
652
|
+
"""Weighted betweenness centrality: G4"""
|
|
653
|
+
G = nx.MultiDiGraph()
|
|
654
|
+
G.add_weighted_edges_from(
|
|
655
|
+
[
|
|
656
|
+
("s", "u", 10),
|
|
657
|
+
("s", "x", 5),
|
|
658
|
+
("s", "x", 6),
|
|
659
|
+
("u", "v", 1),
|
|
660
|
+
("u", "x", 2),
|
|
661
|
+
("v", "y", 1),
|
|
662
|
+
("v", "y", 1),
|
|
663
|
+
("x", "u", 3),
|
|
664
|
+
("x", "v", 5),
|
|
665
|
+
("x", "y", 2),
|
|
666
|
+
("x", "y", 3),
|
|
667
|
+
("y", "s", 7),
|
|
668
|
+
("y", "v", 6),
|
|
669
|
+
("y", "v", 6),
|
|
670
|
+
]
|
|
671
|
+
)
|
|
672
|
+
|
|
673
|
+
b_answer = {"y": 5.0, "x": 5.0, "s": 4.0, "u": 2.0, "v": 2.0}
|
|
674
|
+
|
|
675
|
+
b = nx.betweenness_centrality(G, weight="weight", normalized=False)
|
|
676
|
+
for n in sorted(G):
|
|
677
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
678
|
+
|
|
679
|
+
|
|
680
|
+
class TestEdgeBetweennessCentrality:
|
|
681
|
+
def test_K5(self):
|
|
682
|
+
"""Edge betweenness centrality: K5"""
|
|
683
|
+
G = nx.complete_graph(5)
|
|
684
|
+
b = nx.edge_betweenness_centrality(G, weight=None, normalized=False)
|
|
685
|
+
b_answer = dict.fromkeys(G.edges(), 1)
|
|
686
|
+
for n in sorted(G.edges()):
|
|
687
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
688
|
+
|
|
689
|
+
def test_normalized_K5(self):
|
|
690
|
+
"""Edge betweenness centrality: K5"""
|
|
691
|
+
G = nx.complete_graph(5)
|
|
692
|
+
b = nx.edge_betweenness_centrality(G, weight=None, normalized=True)
|
|
693
|
+
b_answer = dict.fromkeys(G.edges(), 1 / 10)
|
|
694
|
+
for n in sorted(G.edges()):
|
|
695
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
696
|
+
|
|
697
|
+
def test_C4(self):
|
|
698
|
+
"""Edge betweenness centrality: C4"""
|
|
699
|
+
G = nx.cycle_graph(4)
|
|
700
|
+
b = nx.edge_betweenness_centrality(G, weight=None, normalized=True)
|
|
701
|
+
b_answer = {(0, 1): 2, (0, 3): 2, (1, 2): 2, (2, 3): 2}
|
|
702
|
+
for n in sorted(G.edges()):
|
|
703
|
+
assert b[n] == pytest.approx(b_answer[n] / 6, abs=1e-7)
|
|
704
|
+
|
|
705
|
+
def test_P4(self):
|
|
706
|
+
"""Edge betweenness centrality: P4"""
|
|
707
|
+
G = nx.path_graph(4)
|
|
708
|
+
b = nx.edge_betweenness_centrality(G, weight=None, normalized=False)
|
|
709
|
+
b_answer = {(0, 1): 3, (1, 2): 4, (2, 3): 3}
|
|
710
|
+
for n in sorted(G.edges()):
|
|
711
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
712
|
+
|
|
713
|
+
def test_normalized_P4(self):
|
|
714
|
+
"""Edge betweenness centrality: P4"""
|
|
715
|
+
G = nx.path_graph(4)
|
|
716
|
+
b = nx.edge_betweenness_centrality(G, weight=None, normalized=True)
|
|
717
|
+
b_answer = {(0, 1): 3, (1, 2): 4, (2, 3): 3}
|
|
718
|
+
for n in sorted(G.edges()):
|
|
719
|
+
assert b[n] == pytest.approx(b_answer[n] / 6, abs=1e-7)
|
|
720
|
+
|
|
721
|
+
def test_balanced_tree(self):
|
|
722
|
+
"""Edge betweenness centrality: balanced tree"""
|
|
723
|
+
G = nx.balanced_tree(r=2, h=2)
|
|
724
|
+
b = nx.edge_betweenness_centrality(G, weight=None, normalized=False)
|
|
725
|
+
b_answer = {(0, 1): 12, (0, 2): 12, (1, 3): 6, (1, 4): 6, (2, 5): 6, (2, 6): 6}
|
|
726
|
+
for n in sorted(G.edges()):
|
|
727
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
728
|
+
|
|
729
|
+
def test_edge_betweenness_k(self):
|
|
730
|
+
"""Ensure setting `k` properly limits the number of source nodes."""
|
|
731
|
+
G = nx.path_graph(3)
|
|
732
|
+
# This choice of `k` and `seed` selects nodes 0 and 2.
|
|
733
|
+
# There is only one shortest path between any two pairs of nodes.
|
|
734
|
+
# With source nodes 0 and 2, this means that both edges are part of
|
|
735
|
+
# three shortest paths:
|
|
736
|
+
# For (0, 1): sp(0, 1), sp(0, 2), sp(2, 0).
|
|
737
|
+
# For (1, 2): sp(0, 2), sp(2, 0), sp(2, 1).
|
|
738
|
+
# We normalize by 2 because the graph is undirected, and by
|
|
739
|
+
# `k / n = 2 / 3` because we are only considering a subset of source
|
|
740
|
+
# nodes.
|
|
741
|
+
# This means the final eb centralities should be 3 / 2 / (2 / 3) = 9 / 4.
|
|
742
|
+
eb = nx.edge_betweenness_centrality(G, k=2, seed=42, normalized=False)
|
|
743
|
+
assert eb == {(0, 1): 9 / 4, (1, 2): 9 / 4}
|
|
744
|
+
# When normalization is `True`, we instead divide by the number of total
|
|
745
|
+
# `(s, t)` pairs, i.e. `k * (n - 1) = 4`, meaning we get an eb of `3 / 4`.
|
|
746
|
+
eb = nx.edge_betweenness_centrality(G, k=2, seed=42, normalized=True)
|
|
747
|
+
assert eb == {(0, 1): 3 / 4, (1, 2): 3 / 4}
|
|
748
|
+
|
|
749
|
+
|
|
750
|
+
class TestWeightedEdgeBetweennessCentrality:
|
|
751
|
+
def test_K5(self):
|
|
752
|
+
"""Edge betweenness centrality: K5"""
|
|
753
|
+
G = nx.complete_graph(5)
|
|
754
|
+
b = nx.edge_betweenness_centrality(G, weight="weight", normalized=False)
|
|
755
|
+
b_answer = dict.fromkeys(G.edges(), 1)
|
|
756
|
+
for n in sorted(G.edges()):
|
|
757
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
758
|
+
|
|
759
|
+
def test_C4(self):
|
|
760
|
+
"""Edge betweenness centrality: C4"""
|
|
761
|
+
G = nx.cycle_graph(4)
|
|
762
|
+
b = nx.edge_betweenness_centrality(G, weight="weight", normalized=False)
|
|
763
|
+
b_answer = {(0, 1): 2, (0, 3): 2, (1, 2): 2, (2, 3): 2}
|
|
764
|
+
for n in sorted(G.edges()):
|
|
765
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
766
|
+
|
|
767
|
+
def test_P4(self):
|
|
768
|
+
"""Edge betweenness centrality: P4"""
|
|
769
|
+
G = nx.path_graph(4)
|
|
770
|
+
b = nx.edge_betweenness_centrality(G, weight="weight", normalized=False)
|
|
771
|
+
b_answer = {(0, 1): 3, (1, 2): 4, (2, 3): 3}
|
|
772
|
+
for n in sorted(G.edges()):
|
|
773
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
774
|
+
|
|
775
|
+
def test_balanced_tree(self):
|
|
776
|
+
"""Edge betweenness centrality: balanced tree"""
|
|
777
|
+
G = nx.balanced_tree(r=2, h=2)
|
|
778
|
+
b = nx.edge_betweenness_centrality(G, weight="weight", normalized=False)
|
|
779
|
+
b_answer = {(0, 1): 12, (0, 2): 12, (1, 3): 6, (1, 4): 6, (2, 5): 6, (2, 6): 6}
|
|
780
|
+
for n in sorted(G.edges()):
|
|
781
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
782
|
+
|
|
783
|
+
def test_weighted_graph(self):
|
|
784
|
+
"""Edge betweenness centrality: weighted"""
|
|
785
|
+
eList = [
|
|
786
|
+
(0, 1, 5),
|
|
787
|
+
(0, 2, 4),
|
|
788
|
+
(0, 3, 3),
|
|
789
|
+
(0, 4, 2),
|
|
790
|
+
(1, 2, 4),
|
|
791
|
+
(1, 3, 1),
|
|
792
|
+
(1, 4, 3),
|
|
793
|
+
(2, 4, 5),
|
|
794
|
+
(3, 4, 4),
|
|
795
|
+
]
|
|
796
|
+
G = nx.Graph()
|
|
797
|
+
G.add_weighted_edges_from(eList)
|
|
798
|
+
b = nx.edge_betweenness_centrality(G, weight="weight", normalized=False)
|
|
799
|
+
b_answer = {
|
|
800
|
+
(0, 1): 0.0,
|
|
801
|
+
(0, 2): 1.0,
|
|
802
|
+
(0, 3): 2.0,
|
|
803
|
+
(0, 4): 1.0,
|
|
804
|
+
(1, 2): 2.0,
|
|
805
|
+
(1, 3): 3.5,
|
|
806
|
+
(1, 4): 1.5,
|
|
807
|
+
(2, 4): 1.0,
|
|
808
|
+
(3, 4): 0.5,
|
|
809
|
+
}
|
|
810
|
+
for n in sorted(G.edges()):
|
|
811
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
812
|
+
|
|
813
|
+
def test_normalized_weighted_graph(self):
|
|
814
|
+
"""Edge betweenness centrality: normalized weighted"""
|
|
815
|
+
eList = [
|
|
816
|
+
(0, 1, 5),
|
|
817
|
+
(0, 2, 4),
|
|
818
|
+
(0, 3, 3),
|
|
819
|
+
(0, 4, 2),
|
|
820
|
+
(1, 2, 4),
|
|
821
|
+
(1, 3, 1),
|
|
822
|
+
(1, 4, 3),
|
|
823
|
+
(2, 4, 5),
|
|
824
|
+
(3, 4, 4),
|
|
825
|
+
]
|
|
826
|
+
G = nx.Graph()
|
|
827
|
+
G.add_weighted_edges_from(eList)
|
|
828
|
+
b = nx.edge_betweenness_centrality(G, weight="weight", normalized=True)
|
|
829
|
+
b_answer = {
|
|
830
|
+
(0, 1): 0.0,
|
|
831
|
+
(0, 2): 1.0,
|
|
832
|
+
(0, 3): 2.0,
|
|
833
|
+
(0, 4): 1.0,
|
|
834
|
+
(1, 2): 2.0,
|
|
835
|
+
(1, 3): 3.5,
|
|
836
|
+
(1, 4): 1.5,
|
|
837
|
+
(2, 4): 1.0,
|
|
838
|
+
(3, 4): 0.5,
|
|
839
|
+
}
|
|
840
|
+
norm = len(G) * (len(G) - 1) / 2
|
|
841
|
+
for n in sorted(G.edges()):
|
|
842
|
+
assert b[n] == pytest.approx(b_answer[n] / norm, abs=1e-7)
|
|
843
|
+
|
|
844
|
+
def test_weighted_multigraph(self):
|
|
845
|
+
"""Edge betweenness centrality: weighted multigraph"""
|
|
846
|
+
eList = [
|
|
847
|
+
(0, 1, 5),
|
|
848
|
+
(0, 1, 4),
|
|
849
|
+
(0, 2, 4),
|
|
850
|
+
(0, 3, 3),
|
|
851
|
+
(0, 3, 3),
|
|
852
|
+
(0, 4, 2),
|
|
853
|
+
(1, 2, 4),
|
|
854
|
+
(1, 3, 1),
|
|
855
|
+
(1, 3, 2),
|
|
856
|
+
(1, 4, 3),
|
|
857
|
+
(1, 4, 4),
|
|
858
|
+
(2, 4, 5),
|
|
859
|
+
(3, 4, 4),
|
|
860
|
+
(3, 4, 4),
|
|
861
|
+
]
|
|
862
|
+
G = nx.MultiGraph()
|
|
863
|
+
G.add_weighted_edges_from(eList)
|
|
864
|
+
b = nx.edge_betweenness_centrality(G, weight="weight", normalized=False)
|
|
865
|
+
b_answer = {
|
|
866
|
+
(0, 1, 0): 0.0,
|
|
867
|
+
(0, 1, 1): 0.5,
|
|
868
|
+
(0, 2, 0): 1.0,
|
|
869
|
+
(0, 3, 0): 0.75,
|
|
870
|
+
(0, 3, 1): 0.75,
|
|
871
|
+
(0, 4, 0): 1.0,
|
|
872
|
+
(1, 2, 0): 2.0,
|
|
873
|
+
(1, 3, 0): 3.0,
|
|
874
|
+
(1, 3, 1): 0.0,
|
|
875
|
+
(1, 4, 0): 1.5,
|
|
876
|
+
(1, 4, 1): 0.0,
|
|
877
|
+
(2, 4, 0): 1.0,
|
|
878
|
+
(3, 4, 0): 0.25,
|
|
879
|
+
(3, 4, 1): 0.25,
|
|
880
|
+
}
|
|
881
|
+
for n in sorted(G.edges(keys=True)):
|
|
882
|
+
assert b[n] == pytest.approx(b_answer[n], abs=1e-7)
|
|
883
|
+
|
|
884
|
+
def test_normalized_weighted_multigraph(self):
|
|
885
|
+
"""Edge betweenness centrality: normalized weighted multigraph"""
|
|
886
|
+
eList = [
|
|
887
|
+
(0, 1, 5),
|
|
888
|
+
(0, 1, 4),
|
|
889
|
+
(0, 2, 4),
|
|
890
|
+
(0, 3, 3),
|
|
891
|
+
(0, 3, 3),
|
|
892
|
+
(0, 4, 2),
|
|
893
|
+
(1, 2, 4),
|
|
894
|
+
(1, 3, 1),
|
|
895
|
+
(1, 3, 2),
|
|
896
|
+
(1, 4, 3),
|
|
897
|
+
(1, 4, 4),
|
|
898
|
+
(2, 4, 5),
|
|
899
|
+
(3, 4, 4),
|
|
900
|
+
(3, 4, 4),
|
|
901
|
+
]
|
|
902
|
+
G = nx.MultiGraph()
|
|
903
|
+
G.add_weighted_edges_from(eList)
|
|
904
|
+
b = nx.edge_betweenness_centrality(G, weight="weight", normalized=True)
|
|
905
|
+
b_answer = {
|
|
906
|
+
(0, 1, 0): 0.0,
|
|
907
|
+
(0, 1, 1): 0.5,
|
|
908
|
+
(0, 2, 0): 1.0,
|
|
909
|
+
(0, 3, 0): 0.75,
|
|
910
|
+
(0, 3, 1): 0.75,
|
|
911
|
+
(0, 4, 0): 1.0,
|
|
912
|
+
(1, 2, 0): 2.0,
|
|
913
|
+
(1, 3, 0): 3.0,
|
|
914
|
+
(1, 3, 1): 0.0,
|
|
915
|
+
(1, 4, 0): 1.5,
|
|
916
|
+
(1, 4, 1): 0.0,
|
|
917
|
+
(2, 4, 0): 1.0,
|
|
918
|
+
(3, 4, 0): 0.25,
|
|
919
|
+
(3, 4, 1): 0.25,
|
|
920
|
+
}
|
|
921
|
+
norm = len(G) * (len(G) - 1) / 2
|
|
922
|
+
for n in sorted(G.edges(keys=True)):
|
|
923
|
+
assert b[n] == pytest.approx(b_answer[n] / norm, abs=1e-7)
|