okstra 0.107.2 → 0.109.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (649) hide show
  1. package/package.json +1 -1
  2. package/runtime/BUILD.json +2 -2
  3. package/runtime/prompts/lead/okstra-lead-contract.md +1 -1
  4. package/runtime/prompts/profiles/_common-contract.md +3 -2
  5. package/runtime/python/okstra_ctl/graphify_cmd.py +225 -0
  6. package/runtime/python/okstra_ctl/resolve_task_key.py +15 -9
  7. package/runtime/python/okstra_ctl/session.py +44 -0
  8. package/runtime/python/okstra_project/__init__.py +2 -0
  9. package/runtime/python/okstra_project/state.py +36 -0
  10. package/runtime/python/okstra_token_usage/claude.py +15 -9
  11. package/runtime/python/okstra_token_usage/cli.py +23 -0
  12. package/runtime/python/okstra_token_usage/collect.py +163 -4
  13. package/runtime/python/okstra_vendor/__init__.py +41 -0
  14. package/runtime/python/okstra_vendor/graphify/.vendored-version +1 -0
  15. package/runtime/python/okstra_vendor/graphify/__init__.py +28 -0
  16. package/runtime/python/okstra_vendor/graphify/__main__.py +1371 -0
  17. package/runtime/python/okstra_vendor/graphify/analyze.py +540 -0
  18. package/runtime/python/okstra_vendor/graphify/benchmark.py +129 -0
  19. package/runtime/python/okstra_vendor/graphify/build.py +107 -0
  20. package/runtime/python/okstra_vendor/graphify/cache.py +169 -0
  21. package/runtime/python/okstra_vendor/graphify/cluster.py +137 -0
  22. package/runtime/python/okstra_vendor/graphify/detect.py +510 -0
  23. package/runtime/python/okstra_vendor/graphify/export.py +1014 -0
  24. package/runtime/python/okstra_vendor/graphify/extract.py +3277 -0
  25. package/runtime/python/okstra_vendor/graphify/hooks.py +220 -0
  26. package/runtime/python/okstra_vendor/graphify/ingest.py +297 -0
  27. package/runtime/python/okstra_vendor/graphify/manifest.py +4 -0
  28. package/runtime/python/okstra_vendor/graphify/report.py +175 -0
  29. package/runtime/python/okstra_vendor/graphify/security.py +203 -0
  30. package/runtime/python/okstra_vendor/graphify/serve.py +373 -0
  31. package/runtime/python/okstra_vendor/graphify/skill-aider.md +1184 -0
  32. package/runtime/python/okstra_vendor/graphify/skill-claw.md +1184 -0
  33. package/runtime/python/okstra_vendor/graphify/skill-codex.md +1242 -0
  34. package/runtime/python/okstra_vendor/graphify/skill-copilot.md +1268 -0
  35. package/runtime/python/okstra_vendor/graphify/skill-droid.md +1239 -0
  36. package/runtime/python/okstra_vendor/graphify/skill-kiro.md +1183 -0
  37. package/runtime/python/okstra_vendor/graphify/skill-opencode.md +1238 -0
  38. package/runtime/python/okstra_vendor/graphify/skill-trae.md +1208 -0
  39. package/runtime/python/okstra_vendor/graphify/skill-vscode.md +253 -0
  40. package/runtime/python/okstra_vendor/graphify/skill-windows.md +1245 -0
  41. package/runtime/python/okstra_vendor/graphify/skill.md +1319 -0
  42. package/runtime/python/okstra_vendor/graphify/transcribe.py +182 -0
  43. package/runtime/python/okstra_vendor/graphify/validate.py +72 -0
  44. package/runtime/python/okstra_vendor/graphify/watch.py +188 -0
  45. package/runtime/python/okstra_vendor/graphify/wiki.py +214 -0
  46. package/runtime/python/okstra_vendor/networkx/__init__.py +62 -0
  47. package/runtime/python/okstra_vendor/networkx/algorithms/__init__.py +134 -0
  48. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/__init__.py +26 -0
  49. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/clique.py +259 -0
  50. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/clustering_coefficient.py +71 -0
  51. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/connectivity.py +412 -0
  52. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/density.py +396 -0
  53. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/distance_measures.py +150 -0
  54. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/dominating_set.py +149 -0
  55. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/kcomponents.py +369 -0
  56. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/matching.py +44 -0
  57. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/maxcut.py +143 -0
  58. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/ramsey.py +53 -0
  59. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/steinertree.py +265 -0
  60. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/__init__.py +0 -0
  61. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_approx_clust_coeff.py +41 -0
  62. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_clique.py +112 -0
  63. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_connectivity.py +199 -0
  64. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_density.py +146 -0
  65. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_distance_measures.py +59 -0
  66. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_dominating_set.py +78 -0
  67. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_kcomponents.py +303 -0
  68. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_matching.py +8 -0
  69. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_maxcut.py +94 -0
  70. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_ramsey.py +31 -0
  71. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_steinertree.py +306 -0
  72. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_traveling_salesman.py +1014 -0
  73. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_treewidth.py +274 -0
  74. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/tests/test_vertex_cover.py +68 -0
  75. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/traveling_salesman.py +1508 -0
  76. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/treewidth.py +255 -0
  77. package/runtime/python/okstra_vendor/networkx/algorithms/approximation/vertex_cover.py +83 -0
  78. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/__init__.py +5 -0
  79. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/connectivity.py +122 -0
  80. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/correlation.py +302 -0
  81. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/mixing.py +255 -0
  82. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/neighbor_degree.py +160 -0
  83. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/pairs.py +127 -0
  84. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/__init__.py +0 -0
  85. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/base_test.py +81 -0
  86. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_connectivity.py +143 -0
  87. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_correlation.py +122 -0
  88. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_mixing.py +174 -0
  89. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_neighbor_degree.py +107 -0
  90. package/runtime/python/okstra_vendor/networkx/algorithms/assortativity/tests/test_pairs.py +87 -0
  91. package/runtime/python/okstra_vendor/networkx/algorithms/asteroidal.py +164 -0
  92. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/__init__.py +88 -0
  93. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/basic.py +322 -0
  94. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/centrality.py +290 -0
  95. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/cluster.py +289 -0
  96. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/covering.py +57 -0
  97. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/edgelist.py +360 -0
  98. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/extendability.py +105 -0
  99. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/generators.py +603 -0
  100. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/link_analysis.py +316 -0
  101. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/matching.py +590 -0
  102. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/matrix.py +232 -0
  103. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/projection.py +526 -0
  104. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/redundancy.py +112 -0
  105. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/spectral.py +69 -0
  106. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/__init__.py +0 -0
  107. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_basic.py +125 -0
  108. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_centrality.py +192 -0
  109. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_cluster.py +84 -0
  110. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_covering.py +33 -0
  111. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_edgelist.py +240 -0
  112. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_extendability.py +334 -0
  113. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_generators.py +407 -0
  114. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_link_analysis.py +218 -0
  115. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matching.py +327 -0
  116. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_matrix.py +138 -0
  117. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_project.py +409 -0
  118. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_redundancy.py +35 -0
  119. package/runtime/python/okstra_vendor/networkx/algorithms/bipartite/tests/test_spectral_bipartivity.py +80 -0
  120. package/runtime/python/okstra_vendor/networkx/algorithms/boundary.py +168 -0
  121. package/runtime/python/okstra_vendor/networkx/algorithms/bridges.py +205 -0
  122. package/runtime/python/okstra_vendor/networkx/algorithms/broadcasting.py +164 -0
  123. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/__init__.py +20 -0
  124. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/betweenness.py +591 -0
  125. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/betweenness_subset.py +236 -0
  126. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/closeness.py +282 -0
  127. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_betweenness.py +364 -0
  128. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_betweenness_subset.py +227 -0
  129. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/current_flow_closeness.py +96 -0
  130. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/degree_alg.py +150 -0
  131. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/dispersion.py +107 -0
  132. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/eigenvector.py +357 -0
  133. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/flow_matrix.py +130 -0
  134. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/group.py +787 -0
  135. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/harmonic.py +88 -0
  136. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/katz.py +331 -0
  137. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/laplacian.py +150 -0
  138. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/load.py +200 -0
  139. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/percolation.py +128 -0
  140. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/reaching.py +209 -0
  141. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/second_order.py +141 -0
  142. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/subgraph_alg.py +361 -0
  143. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/__init__.py +0 -0
  144. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality.py +923 -0
  145. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_betweenness_centrality_subset.py +354 -0
  146. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_closeness_centrality.py +274 -0
  147. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality.py +259 -0
  148. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_betweenness_centrality_subset.py +147 -0
  149. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_current_flow_closeness.py +43 -0
  150. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_degree_centrality.py +144 -0
  151. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_dispersion.py +73 -0
  152. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_eigenvector_centrality.py +186 -0
  153. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_group.py +277 -0
  154. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_harmonic_centrality.py +122 -0
  155. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_katz_centrality.py +345 -0
  156. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_laplacian_centrality.py +220 -0
  157. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_load_centrality.py +344 -0
  158. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_percolation_centrality.py +87 -0
  159. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_reaching.py +140 -0
  160. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_second_order_centrality.py +82 -0
  161. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_subgraph.py +110 -0
  162. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_trophic.py +302 -0
  163. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/tests/test_voterank.py +64 -0
  164. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/trophic.py +181 -0
  165. package/runtime/python/okstra_vendor/networkx/algorithms/centrality/voterank_alg.py +95 -0
  166. package/runtime/python/okstra_vendor/networkx/algorithms/chains.py +172 -0
  167. package/runtime/python/okstra_vendor/networkx/algorithms/chordal.py +443 -0
  168. package/runtime/python/okstra_vendor/networkx/algorithms/clique.py +818 -0
  169. package/runtime/python/okstra_vendor/networkx/algorithms/cluster.py +732 -0
  170. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/__init__.py +4 -0
  171. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/equitable_coloring.py +505 -0
  172. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/greedy_coloring.py +565 -0
  173. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/__init__.py +0 -0
  174. package/runtime/python/okstra_vendor/networkx/algorithms/coloring/tests/test_coloring.py +863 -0
  175. package/runtime/python/okstra_vendor/networkx/algorithms/communicability_alg.py +163 -0
  176. package/runtime/python/okstra_vendor/networkx/algorithms/community/__init__.py +28 -0
  177. package/runtime/python/okstra_vendor/networkx/algorithms/community/asyn_fluid.py +153 -0
  178. package/runtime/python/okstra_vendor/networkx/algorithms/community/bipartitions.py +354 -0
  179. package/runtime/python/okstra_vendor/networkx/algorithms/community/centrality.py +171 -0
  180. package/runtime/python/okstra_vendor/networkx/algorithms/community/community_utils.py +30 -0
  181. package/runtime/python/okstra_vendor/networkx/algorithms/community/divisive.py +216 -0
  182. package/runtime/python/okstra_vendor/networkx/algorithms/community/kclique.py +79 -0
  183. package/runtime/python/okstra_vendor/networkx/algorithms/community/label_propagation.py +338 -0
  184. package/runtime/python/okstra_vendor/networkx/algorithms/community/leiden.py +162 -0
  185. package/runtime/python/okstra_vendor/networkx/algorithms/community/local.py +220 -0
  186. package/runtime/python/okstra_vendor/networkx/algorithms/community/louvain.py +384 -0
  187. package/runtime/python/okstra_vendor/networkx/algorithms/community/lukes.py +227 -0
  188. package/runtime/python/okstra_vendor/networkx/algorithms/community/modularity_max.py +452 -0
  189. package/runtime/python/okstra_vendor/networkx/algorithms/community/quality.py +347 -0
  190. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/__init__.py +0 -0
  191. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_asyn_fluid.py +147 -0
  192. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_bipartitions.py +157 -0
  193. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_centrality.py +85 -0
  194. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_divisive.py +106 -0
  195. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_kclique.py +91 -0
  196. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_label_propagation.py +241 -0
  197. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_leiden.py +138 -0
  198. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_local.py +76 -0
  199. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_louvain.py +264 -0
  200. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_lukes.py +152 -0
  201. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_modularity_max.py +340 -0
  202. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_quality.py +139 -0
  203. package/runtime/python/okstra_vendor/networkx/algorithms/community/tests/test_utils.py +26 -0
  204. package/runtime/python/okstra_vendor/networkx/algorithms/components/__init__.py +6 -0
  205. package/runtime/python/okstra_vendor/networkx/algorithms/components/attracting.py +115 -0
  206. package/runtime/python/okstra_vendor/networkx/algorithms/components/biconnected.py +394 -0
  207. package/runtime/python/okstra_vendor/networkx/algorithms/components/connected.py +282 -0
  208. package/runtime/python/okstra_vendor/networkx/algorithms/components/semiconnected.py +71 -0
  209. package/runtime/python/okstra_vendor/networkx/algorithms/components/strongly_connected.py +359 -0
  210. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/__init__.py +0 -0
  211. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_attracting.py +70 -0
  212. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_biconnected.py +248 -0
  213. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_connected.py +138 -0
  214. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_semiconnected.py +55 -0
  215. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_strongly_connected.py +193 -0
  216. package/runtime/python/okstra_vendor/networkx/algorithms/components/tests/test_weakly_connected.py +96 -0
  217. package/runtime/python/okstra_vendor/networkx/algorithms/components/weakly_connected.py +196 -0
  218. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/__init__.py +11 -0
  219. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/connectivity.py +811 -0
  220. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/cuts.py +616 -0
  221. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/disjoint_paths.py +408 -0
  222. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/edge_augmentation.py +1270 -0
  223. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/edge_kcomponents.py +592 -0
  224. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/kcomponents.py +220 -0
  225. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/kcutsets.py +235 -0
  226. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/stoerwagner.py +152 -0
  227. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/__init__.py +0 -0
  228. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_connectivity.py +421 -0
  229. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_cuts.py +309 -0
  230. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_disjoint_paths.py +249 -0
  231. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_augmentation.py +502 -0
  232. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_edge_kcomponents.py +488 -0
  233. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcomponents.py +323 -0
  234. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_kcutsets.py +280 -0
  235. package/runtime/python/okstra_vendor/networkx/algorithms/connectivity/tests/test_stoer_wagner.py +102 -0
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@@ -0,0 +1,192 @@
1
+ # This file contains utilities for testing the dispatching feature
2
+
3
+ # A full test of all dispatchable algorithms is performed by
4
+ # modifying the pytest invocation and setting an environment variable
5
+ # NETWORKX_TEST_BACKEND=nx_loopback pytest
6
+ # This is comprehensive, but only tests the `test_override_dispatch`
7
+ # function in networkx.classes.backends.
8
+
9
+ # To test the `_dispatchable` function directly, several tests scattered throughout
10
+ # NetworkX have been augmented to test normal and dispatch mode.
11
+ # Searching for `dispatch_interface` should locate the specific tests.
12
+
13
+ import networkx as nx
14
+ from networkx import DiGraph, Graph, MultiDiGraph, MultiGraph, PlanarEmbedding
15
+ from networkx.classes.reportviews import NodeView
16
+
17
+
18
+ class LoopbackGraph(Graph):
19
+ __networkx_backend__ = "nx_loopback"
20
+
21
+
22
+ class LoopbackDiGraph(DiGraph):
23
+ __networkx_backend__ = "nx_loopback"
24
+
25
+
26
+ class LoopbackMultiGraph(MultiGraph):
27
+ __networkx_backend__ = "nx_loopback"
28
+
29
+
30
+ class LoopbackMultiDiGraph(MultiDiGraph):
31
+ __networkx_backend__ = "nx_loopback"
32
+
33
+
34
+ class LoopbackPlanarEmbedding(PlanarEmbedding):
35
+ __networkx_backend__ = "nx_loopback"
36
+
37
+
38
+ def convert(graph):
39
+ if isinstance(graph, PlanarEmbedding):
40
+ return LoopbackPlanarEmbedding(graph)
41
+ if isinstance(graph, MultiDiGraph):
42
+ return LoopbackMultiDiGraph(graph)
43
+ if isinstance(graph, MultiGraph):
44
+ return LoopbackMultiGraph(graph)
45
+ if isinstance(graph, DiGraph):
46
+ return LoopbackDiGraph(graph)
47
+ if isinstance(graph, Graph):
48
+ return LoopbackGraph(graph)
49
+ raise TypeError(f"Unsupported type of graph: {type(graph)}")
50
+
51
+
52
+ class LoopbackBackendInterface:
53
+ def __getattr__(self, item):
54
+ try:
55
+ return nx.utils.backends._registered_algorithms[item].orig_func
56
+ except KeyError:
57
+ raise AttributeError(item) from None
58
+
59
+ @staticmethod
60
+ def graph__new__(cls, incoming_graph_data=None, **attr):
61
+ # LoopbackGraph.__init__ will be called next since the returned
62
+ # object is an instance of an nx.Graph. For more details, see:
63
+ # https://docs.python.org/3/reference/datamodel.html#object.__new__
64
+ return object.__new__(LoopbackGraph)
65
+
66
+ @staticmethod
67
+ def convert_from_nx(
68
+ graph,
69
+ *,
70
+ edge_attrs=None,
71
+ node_attrs=None,
72
+ preserve_edge_attrs=None,
73
+ preserve_node_attrs=None,
74
+ preserve_graph_attrs=None,
75
+ name=None,
76
+ graph_name=None,
77
+ ):
78
+ if name in {
79
+ # Raise if input graph changes. See test_dag.py::test_topological_sort6
80
+ "lexicographical_topological_sort",
81
+ "topological_generations",
82
+ "topological_sort",
83
+ # Would be nice to some day avoid these cutoffs of full testing
84
+ }:
85
+ return graph
86
+ if isinstance(graph, NodeView):
87
+ # Convert to a Graph with only nodes (no edges)
88
+ new_graph = Graph()
89
+ new_graph.add_nodes_from(graph.items())
90
+ graph = new_graph
91
+ G = LoopbackGraph()
92
+ elif not isinstance(graph, Graph):
93
+ raise TypeError(
94
+ f"Bad type for graph argument {graph_name} in {name}: {type(graph)}"
95
+ )
96
+ elif graph.__class__ in {Graph, LoopbackGraph}:
97
+ G = LoopbackGraph()
98
+ elif graph.__class__ in {DiGraph, LoopbackDiGraph}:
99
+ G = LoopbackDiGraph()
100
+ elif graph.__class__ in {MultiGraph, LoopbackMultiGraph}:
101
+ G = LoopbackMultiGraph()
102
+ elif graph.__class__ in {MultiDiGraph, LoopbackMultiDiGraph}:
103
+ G = LoopbackMultiDiGraph()
104
+ elif graph.__class__ in {PlanarEmbedding, LoopbackPlanarEmbedding}:
105
+ G = LoopbackDiGraph() # or LoopbackPlanarEmbedding
106
+ else:
107
+ # Would be nice to handle these better some day
108
+ # nx.algorithms.approximation.kcomponents._AntiGraph
109
+ # nx.classes.tests.test_multidigraph.MultiDiGraphSubClass
110
+ # nx.classes.tests.test_multigraph.MultiGraphSubClass
111
+ G = graph.__class__()
112
+
113
+ if preserve_graph_attrs:
114
+ G.graph.update(graph.graph)
115
+
116
+ # add nodes
117
+ G.add_nodes_from(graph)
118
+ if preserve_node_attrs:
119
+ for n, dd in G._node.items():
120
+ dd.update(graph.nodes[n])
121
+ elif node_attrs:
122
+ for n, dd in G._node.items():
123
+ dd.update(
124
+ (attr, graph._node[n].get(attr, default))
125
+ for attr, default in node_attrs.items()
126
+ if default is not None or attr in graph._node[n]
127
+ )
128
+
129
+ # tools to build datadict and keydict
130
+ if preserve_edge_attrs:
131
+
132
+ def G_new_datadict(old_dd):
133
+ return G.edge_attr_dict_factory(old_dd)
134
+ elif edge_attrs:
135
+
136
+ def G_new_datadict(old_dd):
137
+ return G.edge_attr_dict_factory(
138
+ (attr, old_dd.get(attr, default))
139
+ for attr, default in edge_attrs.items()
140
+ if default is not None or attr in old_dd
141
+ )
142
+ else:
143
+
144
+ def G_new_datadict(old_dd):
145
+ return G.edge_attr_dict_factory()
146
+
147
+ if G.is_multigraph():
148
+
149
+ def G_new_inner(keydict):
150
+ kd = G.adjlist_inner_dict_factory(
151
+ (k, G_new_datadict(dd)) for k, dd in keydict.items()
152
+ )
153
+ return kd
154
+ else:
155
+ G_new_inner = G_new_datadict
156
+
157
+ # add edges keeping the same order in _adj and _pred
158
+ G_adj = G._adj
159
+ if G.is_directed():
160
+ for n, nbrs in graph._adj.items():
161
+ G_adj[n].update((nbr, G_new_inner(dd)) for nbr, dd in nbrs.items())
162
+ # ensure same datadict for pred and adj; and pred order of graph._pred
163
+ G_pred = G._pred
164
+ for n, nbrs in graph._pred.items():
165
+ G_pred[n].update((nbr, G_adj[nbr][n]) for nbr in nbrs)
166
+ else: # undirected
167
+ for n, nbrs in graph._adj.items():
168
+ # ensure same datadict for both ways; and adj order of graph._adj
169
+ G_adj[n].update(
170
+ (nbr, G_adj[nbr][n] if n in G_adj[nbr] else G_new_inner(dd))
171
+ for nbr, dd in nbrs.items()
172
+ )
173
+
174
+ return G
175
+
176
+ @staticmethod
177
+ def convert_to_nx(obj, *, name=None):
178
+ return obj
179
+
180
+ @staticmethod
181
+ def on_start_tests(items):
182
+ # Verify that items can be xfailed
183
+ for item in items:
184
+ assert hasattr(item, "add_marker")
185
+
186
+ def can_run(self, name, args, kwargs):
187
+ # It is unnecessary to define this function if algorithms are fully supported.
188
+ # We include it for illustration purposes.
189
+ return hasattr(self, name)
190
+
191
+
192
+ backend_interface = LoopbackBackendInterface()
@@ -0,0 +1,476 @@
1
+ """Original NetworkX graph tests"""
2
+
3
+ import pytest
4
+
5
+ import networkx as nx
6
+ from networkx import convert_node_labels_to_integers as cnlti
7
+ from networkx.utils import edges_equal, nodes_equal
8
+
9
+
10
+ class HistoricalTests:
11
+ @classmethod
12
+ def setup_class(cls):
13
+ cls.null = nx.null_graph()
14
+ cls.P1 = cnlti(nx.path_graph(1), first_label=1)
15
+ cls.P3 = cnlti(nx.path_graph(3), first_label=1)
16
+ cls.P10 = cnlti(nx.path_graph(10), first_label=1)
17
+ cls.K1 = cnlti(nx.complete_graph(1), first_label=1)
18
+ cls.K3 = cnlti(nx.complete_graph(3), first_label=1)
19
+ cls.K4 = cnlti(nx.complete_graph(4), first_label=1)
20
+ cls.K5 = cnlti(nx.complete_graph(5), first_label=1)
21
+ cls.K10 = cnlti(nx.complete_graph(10), first_label=1)
22
+ cls.G = nx.Graph
23
+
24
+ def test_name(self):
25
+ G = self.G(name="test")
26
+ assert G.name == "test"
27
+ H = self.G()
28
+ assert H.name == ""
29
+
30
+ # Nodes
31
+
32
+ def test_add_remove_node(self):
33
+ G = self.G()
34
+ G.add_node("A")
35
+ assert G.has_node("A")
36
+ G.remove_node("A")
37
+ assert not G.has_node("A")
38
+
39
+ def test_nonhashable_node(self):
40
+ # Test if a non-hashable object is in the Graph. A python dict will
41
+ # raise a TypeError, but for a Graph class a simple False should be
42
+ # returned (see Graph __contains__). If it cannot be a node then it is
43
+ # not a node.
44
+ G = self.G()
45
+ assert not G.has_node(["A"])
46
+ assert not G.has_node({"A": 1})
47
+
48
+ def test_add_nodes_from(self):
49
+ G = self.G()
50
+ G.add_nodes_from(list("ABCDEFGHIJKL"))
51
+ assert G.has_node("L")
52
+ G.remove_nodes_from(["H", "I", "J", "K", "L"])
53
+ G.add_nodes_from([1, 2, 3, 4])
54
+ assert sorted(G.nodes(), key=str) == [
55
+ 1,
56
+ 2,
57
+ 3,
58
+ 4,
59
+ "A",
60
+ "B",
61
+ "C",
62
+ "D",
63
+ "E",
64
+ "F",
65
+ "G",
66
+ ]
67
+ # test __iter__
68
+ assert sorted(G, key=str) == [1, 2, 3, 4, "A", "B", "C", "D", "E", "F", "G"]
69
+
70
+ def test_contains(self):
71
+ G = self.G()
72
+ G.add_node("A")
73
+ assert "A" in G
74
+ assert [] not in G # never raise a Key or TypeError in this test
75
+ assert {1: 1} not in G
76
+
77
+ def test_add_remove(self):
78
+ # Test add_node and remove_node acting for various nbunch
79
+ G = self.G()
80
+ G.add_node("m")
81
+ assert G.has_node("m")
82
+ G.add_node("m") # no complaints
83
+ pytest.raises(nx.NetworkXError, G.remove_node, "j")
84
+ G.remove_node("m")
85
+ assert list(G) == []
86
+
87
+ def test_nbunch_is_list(self):
88
+ G = self.G()
89
+ G.add_nodes_from(list("ABCD"))
90
+ G.add_nodes_from(self.P3) # add nbunch of nodes (nbunch=Graph)
91
+ assert sorted(G.nodes(), key=str) == [1, 2, 3, "A", "B", "C", "D"]
92
+ G.remove_nodes_from(self.P3) # remove nbunch of nodes (nbunch=Graph)
93
+ assert sorted(G.nodes(), key=str) == ["A", "B", "C", "D"]
94
+
95
+ def test_nbunch_is_set(self):
96
+ G = self.G()
97
+ nbunch = set("ABCDEFGHIJKL")
98
+ G.add_nodes_from(nbunch)
99
+ assert G.has_node("L")
100
+
101
+ def test_nbunch_dict(self):
102
+ # nbunch is a dict with nodes as keys
103
+ G = self.G()
104
+ nbunch = set("ABCDEFGHIJKL")
105
+ G.add_nodes_from(nbunch)
106
+ nbunch = {"I": "foo", "J": 2, "K": True, "L": "spam"}
107
+ G.remove_nodes_from(nbunch)
108
+ assert sorted(G.nodes(), key=str), ["A", "B", "C", "D", "E", "F", "G", "H"]
109
+
110
+ def test_nbunch_iterator(self):
111
+ G = self.G()
112
+ G.add_nodes_from(["A", "B", "C", "D", "E", "F", "G", "H"])
113
+ n_iter = self.P3.nodes()
114
+ G.add_nodes_from(n_iter)
115
+ assert sorted(G.nodes(), key=str) == [
116
+ 1,
117
+ 2,
118
+ 3,
119
+ "A",
120
+ "B",
121
+ "C",
122
+ "D",
123
+ "E",
124
+ "F",
125
+ "G",
126
+ "H",
127
+ ]
128
+ n_iter = self.P3.nodes() # rebuild same iterator
129
+ G.remove_nodes_from(n_iter) # remove nbunch of nodes (nbunch=iterator)
130
+ assert sorted(G.nodes(), key=str) == ["A", "B", "C", "D", "E", "F", "G", "H"]
131
+
132
+ def test_nbunch_graph(self):
133
+ G = self.G()
134
+ G.add_nodes_from(["A", "B", "C", "D", "E", "F", "G", "H"])
135
+ nbunch = self.K3
136
+ G.add_nodes_from(nbunch)
137
+ assert sorted(G.nodes(), key=str), [
138
+ 1,
139
+ 2,
140
+ 3,
141
+ "A",
142
+ "B",
143
+ "C",
144
+ "D",
145
+ "E",
146
+ "F",
147
+ "G",
148
+ "H",
149
+ ]
150
+
151
+ # Edges
152
+
153
+ def test_add_edge(self):
154
+ G = self.G()
155
+ pytest.raises(TypeError, G.add_edge, "A")
156
+
157
+ G.add_edge("A", "B") # testing add_edge()
158
+ G.add_edge("A", "B") # should fail silently
159
+ assert G.has_edge("A", "B")
160
+ assert not G.has_edge("A", "C")
161
+ assert G.has_edge(*("A", "B"))
162
+ if G.is_directed():
163
+ assert not G.has_edge("B", "A")
164
+ else:
165
+ # G is undirected, so B->A is an edge
166
+ assert G.has_edge("B", "A")
167
+
168
+ G.add_edge("A", "C") # test directedness
169
+ G.add_edge("C", "A")
170
+ G.remove_edge("C", "A")
171
+ if G.is_directed():
172
+ assert G.has_edge("A", "C")
173
+ else:
174
+ assert not G.has_edge("A", "C")
175
+ assert not G.has_edge("C", "A")
176
+
177
+ def test_self_loop(self):
178
+ G = self.G()
179
+ G.add_edge("A", "A") # test self loops
180
+ assert G.has_edge("A", "A")
181
+ G.remove_edge("A", "A")
182
+ G.add_edge("X", "X")
183
+ assert G.has_node("X")
184
+ G.remove_node("X")
185
+ G.add_edge("A", "Z") # should add the node silently
186
+ assert G.has_node("Z")
187
+
188
+ def test_add_edges_from(self):
189
+ G = self.G()
190
+ G.add_edges_from([("B", "C")]) # test add_edges_from()
191
+ assert G.has_edge("B", "C")
192
+ if G.is_directed():
193
+ assert not G.has_edge("C", "B")
194
+ else:
195
+ assert G.has_edge("C", "B") # undirected
196
+
197
+ G.add_edges_from([("D", "F"), ("B", "D")])
198
+ assert G.has_edge("D", "F")
199
+ assert G.has_edge("B", "D")
200
+
201
+ if G.is_directed():
202
+ assert not G.has_edge("D", "B")
203
+ else:
204
+ assert G.has_edge("D", "B") # undirected
205
+
206
+ def test_add_edges_from2(self):
207
+ G = self.G()
208
+ # after failing silently, should add 2nd edge
209
+ G.add_edges_from([tuple("IJ"), list("KK"), tuple("JK")])
210
+ assert G.has_edge(*("I", "J"))
211
+ assert G.has_edge(*("K", "K"))
212
+ assert G.has_edge(*("J", "K"))
213
+ if G.is_directed():
214
+ assert not G.has_edge(*("K", "J"))
215
+ else:
216
+ assert G.has_edge(*("K", "J"))
217
+
218
+ def test_add_edges_from3(self):
219
+ G = self.G()
220
+ G.add_edges_from(zip(list("ACD"), list("CDE")))
221
+ assert G.has_edge("D", "E")
222
+ assert not G.has_edge("E", "C")
223
+
224
+ def test_remove_edge(self):
225
+ G = self.G()
226
+ G.add_nodes_from([1, 2, 3, "A", "B", "C", "D", "E", "F", "G", "H"])
227
+
228
+ G.add_edges_from(zip(list("MNOP"), list("NOPM")))
229
+ assert G.has_edge("O", "P")
230
+ assert G.has_edge("P", "M")
231
+ G.remove_node("P") # tests remove_node()'s handling of edges.
232
+ assert not G.has_edge("P", "M")
233
+ pytest.raises(TypeError, G.remove_edge, "M")
234
+
235
+ G.add_edge("N", "M")
236
+ assert G.has_edge("M", "N")
237
+ G.remove_edge("M", "N")
238
+ assert not G.has_edge("M", "N")
239
+
240
+ # self loop fails silently
241
+ G.remove_edges_from([list("HI"), list("DF"), tuple("KK"), tuple("JK")])
242
+ assert not G.has_edge("H", "I")
243
+ assert not G.has_edge("J", "K")
244
+ G.remove_edges_from([list("IJ"), list("KK"), list("JK")])
245
+ assert not G.has_edge("I", "J")
246
+ G.remove_nodes_from(set("ZEFHIMNO"))
247
+ G.add_edge("J", "K")
248
+
249
+ def test_edges_nbunch(self):
250
+ # Test G.edges(nbunch) with various forms of nbunch
251
+ G = self.G()
252
+ G.add_edges_from([("A", "B"), ("A", "C"), ("B", "D"), ("C", "B"), ("C", "D")])
253
+ # node not in nbunch should be quietly ignored
254
+ pytest.raises(nx.NetworkXError, G.edges, 6)
255
+ assert list(G.edges("Z")) == [] # iterable non-node
256
+ # nbunch can be an empty list
257
+ assert list(G.edges([])) == []
258
+ if G.is_directed():
259
+ elist = [("A", "B"), ("A", "C"), ("B", "D")]
260
+ else:
261
+ elist = [("A", "B"), ("A", "C"), ("B", "C"), ("B", "D")]
262
+ # nbunch can be a list
263
+ assert edges_equal(list(G.edges(["A", "B"])), elist, directed=G.is_directed())
264
+ # nbunch can be a set
265
+ assert edges_equal(G.edges({"A", "B"}), elist, directed=G.is_directed())
266
+ # nbunch can be a graph
267
+ G1 = self.G()
268
+ G1.add_nodes_from("AB")
269
+ assert edges_equal(G.edges(G1), elist, directed=G.is_directed())
270
+ # nbunch can be a dict with nodes as keys
271
+ ndict = {"A": "thing1", "B": "thing2"}
272
+ assert edges_equal(G.edges(ndict), elist, directed=G.is_directed())
273
+ # nbunch can be a single node
274
+ assert edges_equal(list(G.edges("A")), [("A", "B"), ("A", "C")])
275
+ assert nodes_equal(sorted(G), ["A", "B", "C", "D"])
276
+
277
+ # nbunch can be nothing (whole graph)
278
+ assert edges_equal(
279
+ list(G.edges()),
280
+ [("A", "B"), ("A", "C"), ("B", "D"), ("C", "B"), ("C", "D")],
281
+ )
282
+
283
+ def test_degree(self):
284
+ G = self.G()
285
+ G.add_edges_from([("A", "B"), ("A", "C"), ("B", "D"), ("C", "B"), ("C", "D")])
286
+ assert G.degree("A") == 2
287
+
288
+ # degree of single node in iterable container must return dict
289
+ assert list(G.degree(["A"])) == [("A", 2)]
290
+ assert sorted(d for n, d in G.degree(["A", "B"])) == [2, 3]
291
+ assert sorted(d for n, d in G.degree()) == [2, 2, 3, 3]
292
+
293
+ def test_degree2(self):
294
+ H = self.G()
295
+ H.add_edges_from([(1, 24), (1, 2)])
296
+ assert sorted(d for n, d in H.degree([1, 24])) == [1, 2]
297
+
298
+ def test_degree_graph(self):
299
+ P3 = nx.path_graph(3)
300
+ P5 = nx.path_graph(5)
301
+ # silently ignore nodes not in P3
302
+ assert dict(d for n, d in P3.degree(["A", "B"])) == {}
303
+ # nbunch can be a graph
304
+ assert sorted(d for n, d in P5.degree(P3)) == [1, 2, 2]
305
+ # nbunch can be a graph that's way too big
306
+ assert sorted(d for n, d in P3.degree(P5)) == [1, 1, 2]
307
+ assert list(P5.degree([])) == []
308
+ assert dict(P5.degree([])) == {}
309
+
310
+ def test_null(self):
311
+ null = nx.null_graph()
312
+ assert list(null.degree()) == []
313
+ assert dict(null.degree()) == {}
314
+
315
+ def test_order_size(self):
316
+ G = self.G()
317
+ G.add_edges_from([("A", "B"), ("A", "C"), ("B", "D"), ("C", "B"), ("C", "D")])
318
+ assert G.order() == 4
319
+ assert G.size() == 5
320
+ assert G.number_of_edges() == 5
321
+ assert G.number_of_edges("A", "B") == 1
322
+ assert G.number_of_edges("A", "D") == 0
323
+
324
+ def test_copy(self):
325
+ G = self.G()
326
+ H = G.copy() # copy
327
+ assert H.adj == G.adj
328
+ assert H.name == G.name
329
+ assert H is not G
330
+
331
+ def test_subgraph(self):
332
+ G = self.G()
333
+ G.add_edges_from([("A", "B"), ("A", "C"), ("B", "D"), ("C", "B"), ("C", "D")])
334
+ SG = G.subgraph(["A", "B", "D"])
335
+ assert nodes_equal(list(SG), ["A", "B", "D"])
336
+ assert edges_equal(list(SG.edges()), [("A", "B"), ("B", "D")])
337
+
338
+ def test_to_directed(self):
339
+ G = self.G()
340
+ if not G.is_directed():
341
+ G.add_edges_from(
342
+ [("A", "B"), ("A", "C"), ("B", "D"), ("C", "B"), ("C", "D")]
343
+ )
344
+
345
+ DG = G.to_directed()
346
+ assert DG is not G # directed copy or copy
347
+
348
+ assert DG.is_directed()
349
+ assert DG.name == G.name
350
+ assert DG.adj == G.adj
351
+ assert sorted(DG.out_edges(list("AB"))) == [
352
+ ("A", "B"),
353
+ ("A", "C"),
354
+ ("B", "A"),
355
+ ("B", "C"),
356
+ ("B", "D"),
357
+ ]
358
+ DG.remove_edge("A", "B")
359
+ assert DG.has_edge("B", "A") # this removes B-A but not A-B
360
+ assert not DG.has_edge("A", "B")
361
+
362
+ def test_to_undirected(self):
363
+ G = self.G()
364
+ if G.is_directed():
365
+ G.add_edges_from(
366
+ [("A", "B"), ("A", "C"), ("B", "D"), ("C", "B"), ("C", "D")]
367
+ )
368
+ UG = G.to_undirected() # to_undirected
369
+ assert UG is not G
370
+ assert not UG.is_directed()
371
+ assert G.is_directed()
372
+ assert UG.name == G.name
373
+ assert UG.adj != G.adj
374
+ assert sorted(UG.edges(list("AB"))) == [
375
+ ("A", "B"),
376
+ ("A", "C"),
377
+ ("B", "C"),
378
+ ("B", "D"),
379
+ ]
380
+ assert sorted(UG.edges(["A", "B"])) == [
381
+ ("A", "B"),
382
+ ("A", "C"),
383
+ ("B", "C"),
384
+ ("B", "D"),
385
+ ]
386
+ UG.remove_edge("A", "B")
387
+ assert not UG.has_edge("B", "A")
388
+ assert not UG.has_edge("A", "B")
389
+
390
+ def test_neighbors(self):
391
+ G = self.G()
392
+ G.add_edges_from([("A", "B"), ("A", "C"), ("B", "D"), ("C", "B"), ("C", "D")])
393
+ G.add_nodes_from("GJK")
394
+ assert sorted(G["A"]) == ["B", "C"]
395
+ assert sorted(G.neighbors("A")) == ["B", "C"]
396
+ assert sorted(G.neighbors("A")) == ["B", "C"]
397
+ assert sorted(G.neighbors("G")) == []
398
+ pytest.raises(nx.NetworkXError, G.neighbors, "j")
399
+
400
+ def test_iterators(self):
401
+ G = self.G()
402
+ G.add_edges_from([("A", "B"), ("A", "C"), ("B", "D"), ("C", "B"), ("C", "D")])
403
+ G.add_nodes_from("GJK")
404
+ assert sorted(G.nodes()) == ["A", "B", "C", "D", "G", "J", "K"]
405
+ assert edges_equal(
406
+ G.edges(),
407
+ [("A", "B"), ("A", "C"), ("B", "D"), ("C", "B"), ("C", "D")],
408
+ )
409
+
410
+ assert sorted(v for k, v in G.degree()) == [0, 0, 0, 2, 2, 3, 3]
411
+ assert sorted(G.degree(), key=str) == [
412
+ ("A", 2),
413
+ ("B", 3),
414
+ ("C", 3),
415
+ ("D", 2),
416
+ ("G", 0),
417
+ ("J", 0),
418
+ ("K", 0),
419
+ ]
420
+ assert sorted(G.neighbors("A")) == ["B", "C"]
421
+ pytest.raises(nx.NetworkXError, G.neighbors, "X")
422
+ G.clear()
423
+ assert nx.number_of_nodes(G) == 0
424
+ assert nx.number_of_edges(G) == 0
425
+
426
+ def test_null_subgraph(self):
427
+ # Subgraph of a null graph is a null graph
428
+ nullgraph = nx.null_graph()
429
+ G = nx.null_graph()
430
+ H = G.subgraph([])
431
+ assert nx.is_isomorphic(H, nullgraph)
432
+
433
+ def test_empty_subgraph(self):
434
+ # Subgraph of an empty graph is an empty graph. test 1
435
+ nullgraph = nx.null_graph()
436
+ E5 = nx.empty_graph(5)
437
+ E10 = nx.empty_graph(10)
438
+ H = E10.subgraph([])
439
+ assert nx.is_isomorphic(H, nullgraph)
440
+ H = E10.subgraph([1, 2, 3, 4, 5])
441
+ assert nx.is_isomorphic(H, E5)
442
+
443
+ def test_complete_subgraph(self):
444
+ # Subgraph of a complete graph is a complete graph
445
+ K1 = nx.complete_graph(1)
446
+ K3 = nx.complete_graph(3)
447
+ K5 = nx.complete_graph(5)
448
+ H = K5.subgraph([1, 2, 3])
449
+ assert nx.is_isomorphic(H, K3)
450
+
451
+ def test_subgraph_nbunch(self):
452
+ nullgraph = nx.null_graph()
453
+ K1 = nx.complete_graph(1)
454
+ K3 = nx.complete_graph(3)
455
+ K5 = nx.complete_graph(5)
456
+ # Test G.subgraph(nbunch), where nbunch is a single node
457
+ H = K5.subgraph(1)
458
+ assert nx.is_isomorphic(H, K1)
459
+ # Test G.subgraph(nbunch), where nbunch is a set
460
+ H = K5.subgraph({1})
461
+ assert nx.is_isomorphic(H, K1)
462
+ # Test G.subgraph(nbunch), where nbunch is an iterator
463
+ H = K5.subgraph(iter(K3))
464
+ assert nx.is_isomorphic(H, K3)
465
+ # Test G.subgraph(nbunch), where nbunch is another graph
466
+ H = K5.subgraph(K3)
467
+ assert nx.is_isomorphic(H, K3)
468
+ H = K5.subgraph([9])
469
+ assert nx.is_isomorphic(H, nullgraph)
470
+
471
+ def test_node_tuple_issue(self):
472
+ H = self.G()
473
+ # Test error handling of tuple as a node
474
+ pytest.raises(nx.NetworkXError, H.remove_node, (1, 2))
475
+ H.remove_nodes_from([(1, 2)]) # no error
476
+ pytest.raises(nx.NetworkXError, H.neighbors, (1, 2))